ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY968589.1| Triticum aestivum ice recrystallization inhibitio... 62 1e-06
2gb|AY968588.1| Triticum aestivum ice recrystallization inhibitio... 62 1e-06
3ref|NM_186147.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
5dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
6dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
7ref|XM_550224.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.004
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
9dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
10dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
11gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, com... 44 0.27
12emb|AL158200.17| Human DNA sequence from clone RP11-278E11 on ch... 44 0.27
13dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.27
14dbj|AK067558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.27
15emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 44 0.27
16gb|AC134577.4| Mus musculus BAC clone RP24-79G11 from chromosome... 42 1.1
17gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosom... 42 1.1
18gb|AC123812.3| Mus musculus BAC clone RP24-202N8 from chromosome... 42 1.1
19emb|AL645849.17| Mouse DNA sequence from clone RP23-14F5 on chro... 42 1.1
20emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on ch... 42 1.1
21gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, comp... 42 1.1
22gb|AC083913.2| Genomic sequence for Mus musculus, clone RP23-376... 42 1.1
23gb|AC037198.7|AC037198 Homo sapiens chromosome 15 clone CTD-2033... 42 1.1
24gb|AC154477.2| Mus musculus BAC clone RP24-134B24 from 14, compl... 42 1.1
25gb|AC147240.3| Mus musculus BAC clone RP23-398F20 from 10, compl... 42 1.1
26gb|AC096784.17| Mus musculus strain C57BL/6J chromosome 10 clone... 42 1.1
27gb|AC137855.14| Mus musculus chromosome 16, clone RP24-444E8, co... 40 4.2
28ref|NM_196945.1| Oryza sativa (japonica cultivar-group) putative... 40 4.2
29gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, co... 40 4.2
30gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL ... 40 4.2
31gb|AC124326.11| Mus musculus chromosome 16, clone RP24-463I7, co... 40 4.2
32gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility l... 40 4.2
33gb|AC107732.11| Mus musculus chromosome 7, clone RP23-424E6, com... 40 4.2
34gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome... 40 4.2
35gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromo... 40 4.2
36gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, comp... 40 4.2
37gb|AC007616.5| Homo sapiens chromosome 16 clone RP11-547D14, com... 40 4.2
38gb|AC124458.5| Mus musculus BAC clone RP24-136E11 from chromosom... 40 4.2
39gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosom... 40 4.2
40gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosom... 40 4.2
41gb|AC123053.4| Mus musculus BAC clone RP24-374O20 from chromosom... 40 4.2
42gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome... 40 4.2
43gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, comple... 40 4.2
44gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complet... 40 4.2
45gb|AC100154.9| Mus musculus chromosome 7, clone RP23-43N5, compl... 40 4.2
46gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, com... 40 4.2
47gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, compl... 40 4.2
48gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome... 40 4.2
49gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, co... 40 4.2
50gb|AC152162.9| Mus musculus chromosome 19, clone RP23-457B18, co... 40 4.2
51gb|AC162878.2| Mus musculus chromosome 7, clone RP24-316O13, com... 40 4.2
52gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosom... 40 4.2
53gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp... 40 4.2
54gb|AC021460.10| Homo sapiens chromosome 15, clone RP11-259F15, c... 40 4.2
55gb|AC005342.1| Homo sapiens 12p13.3 PAC RPCI5-1096D14 (Roswell P... 40 4.2
56gb|AC024996.6| Homo sapiens chromosome 8, clone RP11-697C18, com... 40 4.2
57gb|AC101940.17| Mus musculus chromosome 3, clone RP24-111E3, com... 40 4.2
58gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome... 40 4.2
59gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, r... 40 4.2
60dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.2
61gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, com... 40 4.2
62gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, r... 40 4.2
63gb|AC103563.5| Homo sapiens BAC clone RP11-708D7 from 2, complet... 40 4.2
64gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 40 4.2
65gb|AC130277.6| Mus musculus chromosome 1, clone RP24-387G4, comp... 40 4.2
66gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Can... 40 4.2
67emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on ch... 40 4.2
68dbj|AK121166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
69dbj|AK066147.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.2
70gb|AC102755.18| Mus musculus chromosome 19, clone RP24-143E6, co... 40 4.2
71gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4... 40 4.2
72gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69... 40 4.2
73gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.2
74gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome... 40 4.2
75gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.2
76emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chro... 40 4.2
77gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete... 40 4.2
78gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, com... 40 4.2
79gb|AC149062.3| Mus musculus BAC clone RP23-183E20 from 7, comple... 40 4.2
80gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complet... 40 4.2
81gb|AC126323.6| Homo sapiens chromosome 15, clone RP11-299H22, co... 40 4.2
82emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on ch... 40 4.2 
>gb|AY968589.1| Triticum aestivum ice recrystallization inhibition protein 2
           precursor, mRNA, complete cds
          Length = 1596

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 257 gccagcggccgcgtcacggcgttgcgcctccctggacgcggcctcgcgggcgccatccca 316
           ||||||||||||||||||||  |||| |||| ||| | ||||||||||||  ||||||||
Sbjct: 211 gccagcggccgcgtcacggctctgcggctccatggtcacggcctcgcggggcccatccca 270

              
Query: 317 gga 319
           |||
Sbjct: 271 gga 273



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 129 cgtgccaccccgacgacctaagcgcgctgcggggcttcgccgg 171
           |||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 83  cgtgccaccccgacgacctacgtgcgctgcggggcttggccgg 125
to top
>gb|AY968588.1| Triticum aestivum ice recrystallization inhibition protein 1
           precursor, mRNA, complete cds
          Length = 1079

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 150/192 (78%)
 Strand = Plus / Plus

                                                                       
Query: 128 tcgtgccaccccgacgacctaagcgcgctgcggggcttcgccgggaacctcagcnnnnnn 187
           |||||||||||||| |||||  | ||||| |||||||||||||| |||||||||      
Sbjct: 152 tcgtgccaccccgatgacctccgtgcgctacggggcttcgccggaaacctcagcggtggg 211

                                                                       
Query: 188 nccgttctccttcgcgccgcgtggtccggcaccgtctgctgcggctgggacggcgtgggc 247
            | |  ||||| || || || ||||||||  ||  |||||||| |||||| ||||||  |
Sbjct: 212 gctgccctcctccgtgctgcctggtccggtgcctcctgctgcgtctgggaaggcgtgaac 271

                                                                       
Query: 248 tgtgacgccgccagcggccgcgtcacggcgttgcgcctccctggacgcggcctcgcgggc 307
           || || | | | |||||||| ||||||||| |||| |||||||| | |||||||| ||| 
Sbjct: 272 tgcgatggcactagcggccgtgtcacggcgctgcggctccctgggcacggcctcgtgggg 331

                       
Query: 308 gccatcccagga 319
             ||||||||||
Sbjct: 332 ctcatcccagga 343
to top
>ref|NM_186147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3033

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/89 (83%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                       
Query: 200 cgcgccgcgtggtccggcaccgtctgctgcggctgggacggcgtgggctgtgacgccgcc 259
           |||||||||||||| ||   || |||||||| |||||||||||| | ||| |||||||| 
Sbjct: 166 cgcgccgcgtggtcgggtgacgcctgctgcgcctgggacggcgtcgcctgcgacgccgc- 224

                                        
Query: 260 agcggccgcgtcacggcgttgcgcctccc 288
             || ||| ||||||||| ||||||||||
Sbjct: 225 --cgcccgagtcacggcgctgcgcctccc 251
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/89 (83%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                          
Query: 200    cgcgccgcgtggtccggcaccgtctgctgcggctgggacggcgtgggctgtgacgccgcc 259
              |||||||||||||| ||   || |||||||| |||||||||||| | ||| |||||||| 
Sbjct: 424262 cgcgccgcgtggtcgggtgacgcctgctgcgcctgggacggcgtcgcctgcgacgccgc- 424320

                                           
Query: 260    agcggccgcgtcacggcgttgcgcctccc 288
                || ||| ||||||||| ||||||||||
Sbjct: 424321 --cgcccgagtcacggcgctgcgcctccc 424347
to top
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0585H11
          Length = 149371

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/89 (83%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                         
Query: 200   cgcgccgcgtggtccggcaccgtctgctgcggctgggacggcgtgggctgtgacgccgcc 259
             |||||||||||||| ||   || |||||||| |||||||||||| | ||| |||||||| 
Sbjct: 26426 cgcgccgcgtggtcgggtgacgcctgctgcgcctgggacggcgtcgcctgcgacgccgc- 26484

                                          
Query: 260   agcggccgcgtcacggcgttgcgcctccc 288
               || ||| ||||||||| ||||||||||
Sbjct: 26485 --cgcccgagtcacggcgctgcgcctccc 26511
to top
>dbj|AK121984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108O10, full
           insert sequence
          Length = 3392

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 74/89 (83%), Gaps = 3/89 (3%)
 Strand = Plus / Plus

                                                                       
Query: 200 cgcgccgcgtggtccggcaccgtctgctgcggctgggacggcgtgggctgtgacgccgcc 259
           |||||||||||||| ||   || |||||||| |||||||||||| | ||| |||||||| 
Sbjct: 292 cgcgccgcgtggtcgggtgacgcctgctgcgcctgggacggcgtcgcctgcgacgccgc- 350

                                        
Query: 260 agcggccgcgtcacggcgttgcgcctccc 288
             || ||| ||||||||| ||||||||||
Sbjct: 351 --cgcccgagtcacggcgctgcgcctccc 377
to top
>ref|XM_550224.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2916

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 213 ccggcaccgtctgctgcggctgggacggcgtgggctg 249
           ||||||||| ||||||||||||||| ||||| |||||
Sbjct: 215 ccggcaccgactgctgcggctgggagggcgttggctg 251
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 213     ccggcaccgtctgctgcggctgggacggcgtgggctg 249
               ||||||||| ||||||||||||||| ||||| |||||
Sbjct: 3175758 ccggcaccgactgctgcggctgggagggcgttggctg 3175794
to top
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0041E11
          Length = 146335

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 213    ccggcaccgtctgctgcggctgggacggcgtgggctg 249
              ||||||||| ||||||||||||||| ||||| |||||
Sbjct: 119546 ccggcaccgactgctgcggctgggagggcgttggctg 119582
to top
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0433F09
          Length = 150150

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 213    ccggcaccgtctgctgcggctgggacggcgtgggctg 249
              ||||||||| ||||||||||||||| ||||| |||||
Sbjct: 143798 ccggcaccgactgctgcggctgggagggcgttggctg 143834
to top
>gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, complete sequence
          Length = 199965

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 73     cctcctcctcctacccctcttc 94
              ||||||||||||||||||||||
Sbjct: 102955 cctcctcctcctacccctcttc 102934
to top
>emb|AL158200.17| Human DNA sequence from clone RP11-278E11 on chromosome Xp11.21-11.22
             Contains a novel gene and the gene for a novel protein
             similar to ubiquinol-cytochrome c reductase binding
             protein (UQCRB), complete sequence
          Length = 87538

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 75    tcctcctcctacccctcttctt 96
             ||||||||||||||||||||||
Sbjct: 46503 tcctcctcctacccctcttctt 46524
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 216     gcaccgtctgctgcggctgggacggcgtgg 245
               |||||| ||||||||||||||| |||||||
Sbjct: 1147923 gcaccgactgctgcggctgggaaggcgtgg 1147952
to top
>dbj|AK067558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K04, full
           insert sequence
          Length = 2553

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 216 gcaccgtctgctgcggctgggacggcgtgg 245
           |||||| ||||||||||||||| |||||||
Sbjct: 196 gcaccgactgctgcggctgggaaggcgtgg 225
to top
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 216   gcaccgtctgctgcggctgggacggcgtgg 245
             |||||| ||||||||||||||| |||||||
Sbjct: 90305 gcaccgactgctgcggctgggaaggcgtgg 90334
to top
>gb|AC134577.4| Mus musculus BAC clone RP24-79G11 from chromosome 14, complete sequence
          Length = 189085

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 68     tgctgcctcctcctcctacccctcttctt 96
              ||||||||||||||||| |||||| ||||
Sbjct: 161494 tgctgcctcctcctccttcccctcctctt 161466
to top
>gb|AC122251.4| Mus musculus BAC clone RP23-167J15 from chromosome 14, complete
             sequence
          Length = 204588

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 68    tgctgcctcctcctcctacccctcttctt 96
             ||||||||||||||||| |||||| ||||
Sbjct: 42607 tgctgcctcctcctccttcccctcctctt 42579
to top
>gb|AC123812.3| Mus musculus BAC clone RP24-202N8 from chromosome 10, complete sequence
          Length = 176984

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    tcctcctcctacccctcttct 95
             |||||||||||||||||||||
Sbjct: 20288 tcctcctcctacccctcttct 20268
to top
>emb|AL645849.17| Mouse DNA sequence from clone RP23-14F5 on chromosome 11 Contains a
             DEAD box polypeptide 5 (Ddx5) pseudogene, the Gnb2-rs1
             gene for guanine nucleotide binding protein, beta 2
             related sequence 1, the Trim41 gene for tripartite
             motif-containing 41, a novel protein similar to CDK2
             (cyclin-dependent kinase 2)-associated protein 1 (Cdkap1),
             the Trim7 gene for tripartite motif protein 7, the Ifi1
             gene for interferon inducible protein 1, a novel gene
             (LOC277018), two novel genes and four CpG islands,
             complete sequence
          Length = 202559

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 73    cctcctcctcctacccctcttcttg 97
             |||||||||||| ||||||||||||
Sbjct: 55634 cctcctcctcctccccctcttcttg 55610
to top
>emb|BX000995.12| Mouse DNA sequence from clone RP23-106K17 on chromosome 11 Contains a
              protease pseuodogene, complete sequence
          Length = 189417

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     cctcctcctcctacccctctt 93
              |||||||||||||||||||||
Sbjct: 182168 cctcctcctcctacccctctt 182188
to top
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence
          Length = 179145

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 73     cctcctcctcctacccctcttcttg 97
              |||||||||||| ||||||||||||
Sbjct: 117482 cctcctcctcctccccctcttcttg 117506
to top
>gb|AC083913.2| Genomic sequence for Mus musculus, clone RP23-376A14, complete sequence
          Length = 218940

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 73     cctcctcctcctacccctcttcttg 97
              |||||||||||| ||||||||||||
Sbjct: 152514 cctcctcctcctccccctcttcttg 152490
to top
>gb|AC037198.7|AC037198 Homo sapiens chromosome 15 clone CTD-2033D15 map 15q14, complete
             sequence
          Length = 185695

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    cctcctcctacccctcttctt 96
             |||||||||||||||||||||
Sbjct: 39097 cctcctcctacccctcttctt 39077
to top
>gb|AC154477.2| Mus musculus BAC clone RP24-134B24 from 14, complete sequence
          Length = 167259

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 73   cctcctcctcctacccctcttcttg 97
            |||||||||||| ||||||||||||
Sbjct: 4907 cctcctcctcctccccctcttcttg 4883
to top
>gb|AC147240.3| Mus musculus BAC clone RP23-398F20 from 10, complete sequence
          Length = 195921

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     tcctcctcctacccctcttct 95
              |||||||||||||||||||||
Sbjct: 107044 tcctcctcctacccctcttct 107024
to top
>gb|AC096784.17| Mus musculus strain C57BL/6J chromosome 10 clone rp23-232l11, complete
              sequence
          Length = 202124

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 71     tgcctcctcctcctacccctcttct 95
              |||||||||||||| ||||||||||
Sbjct: 187345 tgcctcctcctcctccccctcttct 187321
to top
>gb|AC137855.14| Mus musculus chromosome 16, clone RP24-444E8, complete sequence
          Length = 196783

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 154281 cctcctcctcctccccctcttctt 154258
to top
>ref|NM_196945.1| Oryza sativa (japonica cultivar-group) putative disease resistance
           protein (OSJNBa0079L16.3), mRNA
          Length = 2949

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 238 cggcgtgggctgtgacgccgccagcggc 265
           |||||||||||| ||||||||| |||||
Sbjct: 186 cggcgtgggctgcgacgccgccggcggc 213
to top
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence
          Length = 355714

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     cctcctcctcctacccctct 92
              ||||||||||||||||||||
Sbjct: 175512 cctcctcctcctacccctct 175493
to top
>gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete
             sequence
          Length = 107190

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 76947 cctcctcctccttcccctcttctt 76924
to top
>gb|AC124326.11| Mus musculus chromosome 16, clone RP24-463I7, complete sequence
          Length = 168107

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 124192 cctcctcctcctccccctcttctt 124215
to top
>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region:
             complement C4 (C4) and cytochrome P450 hydroxylase A
             (CYP21OH-A) genes, complete cds; slp pseudogene, complete
             sequence; NG6, SKI, and complement factor B (Bf) genes,
             complete cds; and complement factor C2 (C2) gene, partial
             cds
          Length = 149886

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 13231 cctcctcctccttcccctcttctt 13208
to top
>gb|AC107732.11| Mus musculus chromosome 7, clone RP23-424E6, complete sequence
          Length = 194045

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 191717 cctcctcctcctccccctcttctt 191740
to top
>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence
          Length = 225868

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 148949 cctcctcctcctccccctcttctt 148926
to top
>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete
             sequence
          Length = 192494

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cactcaccaagtcactcact 41
             ||||||||||||||||||||
Sbjct: 12993 cactcaccaagtcactcact 13012



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cactcaccaagtcactcact 41
             ||||||||||||||||||||
Sbjct: 12765 cactcaccaagtcactcact 12784



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cactcaccaagtcactcact 41
             ||||||||||||||||||||
Sbjct: 11929 cactcaccaagtcactcact 11948
to top
>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence
          Length = 186835

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ctcctcctcctacccctctt 93
             ||||||||||||||||||||
Sbjct: 41688 ctcctcctcctacccctctt 41669
to top
>gb|AC007616.5| Homo sapiens chromosome 16 clone RP11-547D14, complete sequence
          Length = 132492

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 66212 cctcctcctcctccccctcttctt 66189
to top
>gb|AC124458.5| Mus musculus BAC clone RP24-136E11 from chromosome 12, complete sequence
          Length = 168181

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     atatgctgcctcctcctcct 84
              ||||||||||||||||||||
Sbjct: 150361 atatgctgcctcctcctcct 150380
to top
>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence
          Length = 159693

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 129431 cctcctcctcctccccctcttctt 129408
to top
>gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosome 5, complete sequence
          Length = 188616

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 186593 cctcctcctcctccccctcttctt 186616
to top
>gb|AC123053.4| Mus musculus BAC clone RP24-374O20 from chromosome 7, complete sequence
          Length = 184618

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 143943 cctcctcctcctccccctcttctt 143920
to top
>gb|AC122056.4| Mus musculus BAC clone RP24-466A3 from chromosome 14, complete sequence
          Length = 179685

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 15998 cctcctcctcctccccctcttctt 16021
to top
>gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, complete sequence
          Length = 216326

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    cctcctcctacccctcttct 95
             ||||||||||||||||||||
Sbjct: 56805 cctcctcctacccctcttct 56824
to top
>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     ctcctcctcctacccctctt 93
              ||||||||||||||||||||
Sbjct: 183788 ctcctcctcctacccctctt 183769
to top
>gb|AC100154.9| Mus musculus chromosome 7, clone RP23-43N5, complete sequence
          Length = 181412

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 96252 cctcctcctcctccccctcttctt 96229
to top
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence
          Length = 217860

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 96497 cctcctcctcctccccctcttctt 96474
to top
>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence
          Length = 175651

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ctcctcctcctacccctctt 93
             ||||||||||||||||||||
Sbjct: 10532 ctcctcctcctacccctctt 10513
to top
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence
          Length = 190772

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 180327 cctcctcctcctccccctcttctt 180304



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 180288 cctcctcctcctccccctcttctt 180265
to top
>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence
          Length = 173681

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 135861 cctcctcctcctccccctcttctt 135884
to top
>gb|AC152162.9| Mus musculus chromosome 19, clone RP23-457B18, complete sequence
          Length = 182365

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 73   cctcctcctcctacccctcttctt 96
            |||||||||||| |||||||||||
Sbjct: 9636 cctcctcctcctccccctcttctt 9613
to top
>gb|AC162878.2| Mus musculus chromosome 7, clone RP24-316O13, complete sequence
          Length = 198612

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 133997 cctcctcctcctccccctcttctt 133974
to top
>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete
           sequence
          Length = 211119

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  cctcctcctcctacccctcttctt 96
           |||||||||||| |||||||||||
Sbjct: 618 cctcctcctcctccccctcttctt 595
to top
>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence
          Length = 192282

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 137314 cctcctcctccttcccctcttctt 137291
to top
>gb|AC021460.10| Homo sapiens chromosome 15, clone RP11-259F15, complete sequence
          Length = 146698

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     gtgatatgctgcctcctcct 81
              ||||||||||||||||||||
Sbjct: 140236 gtgatatgctgcctcctcct 140255
to top
>gb|AC005342.1| Homo sapiens 12p13.3 PAC RPCI5-1096D14 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 220257

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 54134 cctcctcctcctccccctcttctt 54111
to top
>gb|AC024996.6| Homo sapiens chromosome 8, clone RP11-697C18, complete sequence
          Length = 177864

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 122372 cctcctcctcctccccctcttctt 122395
to top
>gb|AC101940.17| Mus musculus chromosome 3, clone RP24-111E3, complete sequence
          Length = 157242

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 103310 cctcctcctcctccccctcttctt 103333
to top
>gb|AC157474.2| Mus musculus BAC clone RP24-565B5 from chromosome 9, complete sequence
          Length = 192701

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 26525 cctcctcctcctccccctcttctt 26548
to top
>gb|AC010842.5|AC010842 Drosophila melanogaster, chromosome 2R, region 59F5-59F8, BAC clone
             BACR02E09, complete sequence
          Length = 175118

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 41133 cctcctcctcctccccctcttctt 41156
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 238      cggcgtgggctgtgacgccgccagcggc 265
                |||||||||||| ||||||||| |||||
Sbjct: 16834571 cggcgtgggctgcgacgccgccggcggc 16834544
to top
>gb|AC158134.8| Mus musculus chromosome 3, clone RP24-384O20, complete sequence
          Length = 209278

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 174956 cctcctcctcctccccctcttctt 174933
to top
>gb|AC005639.2|AC005639 Drosophila melanogaster, chromosome 2R, region 59E3-59F4, BAC clone
              BACR48M01, complete sequence
          Length = 188272

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 185191 cctcctcctcctccccctcttctt 185214
to top
>gb|AC103563.5| Homo sapiens BAC clone RP11-708D7 from 2, complete sequence
          Length = 131132

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    cactcaccaagtcactcact 41
             ||||||||||||||||||||
Sbjct: 86823 cactcaccaagtcactcact 86804



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    cactcaccaagtcactcact 41
             ||||||||||||||||||||
Sbjct: 85947 cactcaccaagtcactcact 85928



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    cactcaccaagtcactcact 41
             ||||||||||||||||||||
Sbjct: 85555 cactcaccaagtcactcact 85536
to top
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
             sequence
          Length = 147452

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 238   cggcgtgggctgtgacgccgccagcggc 265
             |||||||||||| ||||||||| |||||
Sbjct: 19023 cggcgtgggctgcgacgccgccggcggc 18996
to top
>gb|AC130277.6| Mus musculus chromosome 1, clone RP24-387G4, complete sequence
          Length = 125118

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 69    gctgcctcctcctcctacccctcttctt 96
             |||||||||||||||| |||||| ||||
Sbjct: 88889 gctgcctcctcctcctccccctcctctt 88862
to top
>gb|AC153981.5| Mus musculus 10 BAC RP24-112H16 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 177129

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 98626 cctcctcctcctccccctcttctt 98649
to top
>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete
             sequence
          Length = 213263

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 70607 cctcctcctcctccccctcttctt 70630
to top
>dbj|AK121166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080J06, full
            insert sequence
          Length = 3462

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 238  cggcgtgggctgtgacgccgccagcggc 265
            |||||||||||| ||||||||| |||||
Sbjct: 2928 cggcgtgggctgcgacgccgccggcggc 2901
to top
>dbj|AK066147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055B11, full
            insert sequence
          Length = 3362

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 238  cggcgtgggctgtgacgccgccagcggc 265
            |||||||||||| ||||||||| |||||
Sbjct: 3030 cggcgtgggctgcgacgccgccggcggc 3003
to top
>gb|AC102755.18| Mus musculus chromosome 19, clone RP24-143E6, complete sequence
          Length = 153856

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 63535 cctcctcctcctccccctcttctt 63512
to top
>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds
          Length = 17522

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 73   cctcctcctcctacccctcttctt 96
            |||||||||||| |||||||||||
Sbjct: 6607 cctcctcctccttcccctcttctt 6630
to top
>gb|AE003461.3| Drosophila melanogaster chromosome 2R, section 69 of 73 of the complete
              sequence
          Length = 598988

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 218731 cctcctcctcctccccctcttctt 218754
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    ggcgcgcgcggcttcgtgcc 134
              ||||||||||||||||||||
Sbjct: 649961 ggcgcgcgcggcttcgtgcc 649942
to top
>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence
          Length = 181095

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 67    atgctgcctcctcctcctacccctcttc 94
             |||||||||||||||||| | |||||||
Sbjct: 48884 atgctgcctcctcctcctcctcctcttc 48857
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 238      cggcgtgggctgtgacgccgccagcggc 265
                |||||||||||| ||||||||| |||||
Sbjct: 16843611 cggcgtgggctgcgacgccgccggcggc 16843584
to top
>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete
             sequence
          Length = 111957

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 76710 cctcctcctccttcccctcttctt 76687
to top
>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence
          Length = 205726

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 155805 cctcctcctcctccccctcttctt 155782
to top
>gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, complete sequence
          Length = 263382

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 73     cctcctcctcctacccctcttctt 96
              |||||||||||| |||||||||||
Sbjct: 235722 cctcctcctcctccccctcttctt 235745
to top
>gb|AC149062.3| Mus musculus BAC clone RP23-183E20 from 7, complete sequence
          Length = 229956

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 57831 cctcctcctcctccccctcttctt 57808
to top
>gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complete sequence
          Length = 159914

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 50     atgaatgccatggtgatatgctgc 73
              |||| |||||||||||||||||||
Sbjct: 105434 atgattgccatggtgatatgctgc 105411
to top
>gb|AC126323.6| Homo sapiens chromosome 15, clone RP11-299H22, complete sequence
          Length = 170132

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    gtgatatgctgcctcctcct 81
             ||||||||||||||||||||
Sbjct: 79818 gtgatatgctgcctcctcct 79799
to top
>emb|AL731810.20| Mouse DNA sequence from clone RP23-465B20 on chromosome 4, complete
             sequence
          Length = 173609

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    cctcctcctcctacccctcttctt 96
             |||||||||||| |||||||||||
Sbjct: 10694 cctcctcctcctccccctcttctt 10717


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,542,849
Number of Sequences: 3902068
Number of extensions: 2542849
Number of successful extensions: 62289
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61836
Number of HSP's gapped (non-prelim): 453
length of query: 319
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 297
effective length of database: 17,147,199,772
effective search space: 5092718332284
effective search space used: 5092718332284
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top