Clone Name | bart23f01 |
---|---|
Clone Library Name | barley_pub |
>OXO2_HORVU (P45851) Oxalate oxidase 2 precursor (EC 1.2.3.4) (Germin)| Length = 224 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/48 (52%), Positives = 25/48 (52%) Frame = +2 Query: 11 MGYSKTXXXXXXXXXXXXXXXXXXXXXXXQDFCVADLDGKAVSVNGHP 154 MGYSKT QDFCVADLDGKAVSVNGHP Sbjct: 1 MGYSKTLAVSLFAVLLLAPAVLASDPDPLQDFCVADLDGKAVSVNGHP 48
>GER2_WHEAT (P15290) Oxalate oxidase GF-2.8 precursor (EC 1.2.3.4) (Germin| GF-2.8) Length = 224 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/47 (51%), Positives = 24/47 (51%) Frame = +2 Query: 11 MGYSKTXXXXXXXXXXXXXXXXXXXXXXXQDFCVADLDGKAVSVNGH 151 MGYSKT QDFCVADLDGKAVSVNGH Sbjct: 1 MGYSKTLVAGLFAMLLLAPAVLATDPDPLQDFCVADLDGKAVSVNGH 47
>GER3_WHEAT (P26759) Oxalate oxidase GF-3.8 precursor (EC 1.2.3.4) (Germin| GF-3.8) Length = 224 Score = 45.8 bits (107), Expect = 3e-05 Identities = 23/47 (48%), Positives = 23/47 (48%) Frame = +2 Query: 11 MGYSKTXXXXXXXXXXXXXXXXXXXXXXXQDFCVADLDGKAVSVNGH 151 MGYSK QDFCVADLDGKAVSVNGH Sbjct: 1 MGYSKNIASGMFAMLLLASAVLSSNPHPLQDFCVADLDGKAVSVNGH 47
>OXO1_HORVU (P45850) Oxalate oxidase 1 (EC 1.2.3.4) (Germin)| Length = 201 Score = 42.0 bits (97), Expect = 5e-04 Identities = 18/18 (100%), Positives = 18/18 (100%) Frame = +2 Query: 98 QDFCVADLDGKAVSVNGH 151 QDFCVADLDGKAVSVNGH Sbjct: 7 QDFCVADLDGKAVSVNGH 24
>RL15_SILPO (Q5LW38) 50S ribosomal protein L15| Length = 157 Score = 29.3 bits (64), Expect = 3.1 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -3 Query: 107 RSPGEGQGRMPGRPVQGAARRTG 39 R PG G+G+M GR ++G R+G Sbjct: 21 RGPGSGKGKMGGRGIKGQKSRSG 43
>DHH1_CRYNV (Q58Z64) ATP-dependent RNA helicase VAD1 (EC 3.6.1.-) (Virulence| associated DEAD box protein 1) Length = 616 Score = 28.5 bits (62), Expect = 5.3 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -3 Query: 122 QGRRHRSPGEGQGRMPGRPVQGAAR 48 +G+ HR G G+G PG P GA++ Sbjct: 586 RGQGHRGRGRGRGGQPGHPGAGASQ 610
>DAZ1_CAEEL (Q20870) DAZ protein 1| Length = 499 Score = 28.5 bits (62), Expect = 5.3 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -3 Query: 125 RQGRRHRSPGEGQGRMPGRPVQGAARRTG*PLGFWSTP 12 RQG++ R P E Q + P++GA RT P STP Sbjct: 431 RQGKKSRKPSECQDKKTKSPIKGA--RTERPSSSASTP 466
>IGHA1_HUMAN (P01876) Ig alpha-1 chain C region| Length = 353 Score = 28.1 bits (61), Expect = 6.9 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 Query: 21 PKP*RLACSPCCSLHRPSWHPTLTLSRTSVSPTLTAKR 134 P P C P SLHRP+ L S +++ TLT R Sbjct: 116 PTPSPSCCHPRLSLHRPALEDLLLGSEANLTCTLTGLR 153
>CDKL5_HUMAN (O76039) Cyclin-dependent kinase-like 5 (EC 2.7.11.22)| (Serine/threonine-protein kinase 9) Length = 1030 Score = 28.1 bits (61), Expect = 6.9 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +3 Query: 15 GTPKP*RLACSPCCSLHR----PSWHPTLTLSRTSVSPTLTAK 131 G PK C P +LHR P+ +P L + TS+ PTL + Sbjct: 939 GDPKKPHTPCVPNRALHRPISSPAPYPVLQVRGTSMCPTLQVR 981
>DHH1_CRYNE (Q5KJI2) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)| Length = 625 Score = 28.1 bits (61), Expect = 6.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 122 QGRRHRSPGEGQGRMPGRPVQGA 54 +G+ HR G G+G PG+P GA Sbjct: 593 RGQGHRGRGRGRGGQPGQPGAGA 615
>IGHA1_GORGO (P20758) Ig alpha-1 chain C region| Length = 353 Score = 27.7 bits (60), Expect = 9.0 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = +3 Query: 21 PKP*RLACSPCCSLHRPSWHPTLTLSRTSVSPTLTAKR 134 P P C P SLHRP+ L S +++ TLT R Sbjct: 116 PTPSPPCCHPRLSLHRPALEDLLLGSEANLTCTLTGLR 153
>RL15_CAUCR (Q9A8T4) 50S ribosomal protein L15| Length = 161 Score = 27.7 bits (60), Expect = 9.0 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = -3 Query: 107 RSPGEGQGRMPGRPVQGAARRTG 39 R PG G+G+ GR V+G R+G Sbjct: 22 RGPGSGKGKTAGRGVKGQKARSG 44 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,432,736 Number of Sequences: 219361 Number of extensions: 306914 Number of successful extensions: 1273 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1231 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1272 length of database: 80,573,946 effective HSP length: 28 effective length of database: 74,431,838 effective search space used: 1786364112 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)