ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, ... 299 1e-78
2emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxid... 145 5e-32
3emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 137 1e-29
4emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 137 1e-29
5gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor... 131 7e-28
6gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds 131 7e-28
7gb|AY864922.1| Triticum aestivum strain Yumai 18 germin-like pro... 127 1e-26
8emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (... 119 3e-24
9gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds 111 6e-22
10gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds 66 3e-08
11ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA 62 5e-07
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 5e-07
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 5e-07
14gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genom... 62 5e-07
15dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 5e-07
16ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA 58 8e-06
17ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA 58 8e-06
18emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase... 58 8e-06
19emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase... 58 8e-06
20dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 8e-06
21gb|AY650052.1| Triticum monococcum germin-like protein 4 (GLP4) ... 54 1e-04
22emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase... 54 1e-04
23gb|AF250933.1|AF250933 Hordeum vulgare germin A (GerA) gene, com... 54 1e-04
24ref|XM_476095.1| Oryza sativa (japonica cultivar-group), predic... 52 5e-04
25gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome... 52 5e-04
26gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome... 52 5e-04
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 5e-04
28emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase... 44 0.13
29emb|AL512363.11| Human DNA sequence from clone RP11-524H19 on ch... 42 0.49
30ref|XM_323778.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.0
31ref|XM_952410.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.0
32emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1 40 2.0
33emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid co... 40 2.0
34emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine di... 40 2.0
35emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diph... 40 2.0
36emb|AJ237943.1|TAE237943 Triticum aestivum mRNA for germin-like ... 40 2.0
37gb|AY098510.1| Ananas comosus germin-like protein mRNA, complete... 40 2.0
38ref|XM_480456.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.7
39ref|XM_476264.1| Oryza sativa (japonica cultivar-group), predic... 38 7.7
40gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 38 7.7
41ref|XM_600204.2| PREDICTED: Bos taurus similar to potassium chan... 38 7.7
42gb|BC047749.1| Homo sapiens potassium channel, subfamily K, memb... 38 7.7
43gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.7
44gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 38 7.7
45gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 38 7.7
46ref|NM_022055.1| Homo sapiens potassium channel, subfamily K, me... 38 7.7
47gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 38 7.7
48ref|XM_824419.1| Trypanosoma brucei TREU927 cleavage and polyade... 38 7.7
49ref|XM_538919.2| PREDICTED: Canis familiaris similar to taube nu... 38 7.7
50ref|XM_538483.2| PREDICTED: Canis familiaris similar to potassiu... 38 7.7
51gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Can... 38 7.7
52gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promote... 38 7.7
53gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 38 7.7
54gb|AC104390.6| Homo sapiens chromosome 15, clone CTD-2643K12, co... 38 7.7
55emb|CR555306.1| Azoarcus sp. EbN1 complete genome 38 7.7
56emb|BX649604.1|MAD7PMMO Methylocystis strain SC2 clone, complete... 38 7.7
57gb|AC008427.9| Homo sapiens chromosome 5 clone CTC-307M15, compl... 38 7.7
58gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, c... 38 7.7
59dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
60gb|AF287302.1|AF287302 Homo sapiens tandem pore domain potassium... 38 7.7
61gb|AF287300.1|AF287300 Rattus norvegicus tandem pore domain pota... 38 7.7
62ref|NM_022292.1| Rattus norvegicus potassium channel, subfamily ... 38 7.7
63ref|NM_199251.1| Mus musculus potassium channel, subfamily K, me... 38 7.7
64gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, comple... 38 7.7
65gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, co... 38 7.7
66dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 38 7.7
67dbj|AB052939.1| Mus musculus mntk1 mRNA, complete cds 38 7.7
68dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
69dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.7
70dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.7
71gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 38 7.7
72gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic seque... 38 7.7 
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds
          Length = 1006

 Score =  299 bits (151), Expect = 1e-78
 Identities = 154/155 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 146

                                                                       
Query: 65  ccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgac 206

                                              
Query: 125 ggcaaagcggtctcagtgaatggtcatccgagcaa 159
           |||||||||||||||||||||||||||||| ||||
Sbjct: 207 ggcaaagcggtctcagtgaatggtcatccgtgcaa 241
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>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene)
          Length = 675

 Score =  145 bits (73), Expect = 5e-32
 Identities = 130/149 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  atggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccggcc 70
           ||||||||||||||||||||||  | | ||||||| |||  ||||||||| || || | |
Sbjct: 1   atggggtactccaaaaccctagtagctggcctgtttgccacgctgctcctagctccagtc 60

                                                                       
Query: 71  gtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgacggcaaa 130
           ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 61  gtcctggctaccgaccctgaccctctccaggacttctgtgtcgccgacctcgacggcaag 120

                                        
Query: 131 gcggtctcagtgaatggtcatccgagcaa 159
           |||||||| ||||| || |||||| ||||
Sbjct: 121 gcggtctcggtgaacgggcatccgtgcaa 149
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>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3
          Length = 1027

 Score =  137 bits (69), Expect = 1e-29
 Identities = 129/149 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 64
           ||||| ||||| |||||||||| ||||| || | ||||||| | | ||||||||||||| 
Sbjct: 54  caagccatgggttactccaaaaacctaggggctggcctgtttggcatgctgctccttgct 113

                                                                       
Query: 65  ccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgac 124
           |||| ||||||||| ||||||||||||||||||||||||||||| || || ||||| |||
Sbjct: 114 ccgggcgtcctggcctccgaccctgaccctctccaggacttctgcgttgctgacctcgac 173

                                        
Query: 125 ggcaaagcggtctcagtgaatggtcatcc 153
           ||||| |||||||| ||||| || |||||
Sbjct: 174 ggcaaggcggtctctgtgaacgggcatcc 202
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>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1
          Length = 856

 Score =  137 bits (69), Expect = 1e-29
 Identities = 129/149 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 64
           ||||||||||||||||| |||| |||||||| | ||||||||||| ||||| |||| || 
Sbjct: 81  caagcaatggggtactctaaaaacctagcggctggcctgttcgccatgctgttcctagct 140

                                                                       
Query: 65  ccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgac 124
           ||||||||||||||||||||||| || ||||| |||||||||||||| |||||||| || 
Sbjct: 141 ccggccgtcctggcatccgaccccgatcctcttcaggacttctgtgttgccgacctcgat 200

                                        
Query: 125 ggcaaagcggtctcagtgaatggtcatcc 153
           ||||  || ||||| ||||| || |||||
Sbjct: 201 ggcagggcagtctcggtgaacgggcatcc 229
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>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds
          Length = 1012

 Score =  131 bits (66), Expect = 7e-28
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  atggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccggcc 70
           ||||||||||||||||||||||  | | ||||||||||  ||||| | || || ||||||
Sbjct: 86  atggggtactccaaaaccctagtagctggcctgttcgcaatgctgttactagctccggcc 145

                                                                       
Query: 71  gtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgacggcaaa 130
           ||| ||||  ||||||| |||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 146 gtcttggccaccgacccagaccctctccaggacttctgtgtcgccgacctcgacggcaag 205

                         
Query: 131 gcggtctcagtgaa 144
           |||||||| |||||
Sbjct: 206 gcggtctcggtgaa 219
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>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds
          Length = 2822

 Score =  131 bits (66), Expect = 7e-28
 Identities = 117/134 (87%)
 Strand = Plus / Plus

                                                                        
Query: 11   atggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgcaccggcc 70
            ||||||||||||||||||||||  | | ||||||||||  ||||| | || || ||||||
Sbjct: 1799 atggggtactccaaaaccctagtagctggcctgttcgcaatgctgttactagctccggcc 1858

                                                                        
Query: 71   gtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgacggcaaa 130
            ||| ||||  ||||||| |||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1859 gtcttggccaccgacccagaccctctccaggacttctgtgtcgccgacctcgacggcaag 1918

                          
Query: 131  gcggtctcagtgaa 144
            |||||||| |||||
Sbjct: 1919 gcggtctcggtgaa 1932
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>gb|AY864922.1| Triticum aestivum strain Yumai 18 germin-like protein 3 gene,
            promoter region, 5' UTR and partial cds
          Length = 1853

 Score =  127 bits (64), Expect = 1e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                        
Query: 5    caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 64
            ||||| ||||| |||||||||| ||||| || | ||||||| ||| ||||||||||||| 
Sbjct: 1743 caagccatgggttactccaaaaacctaggggctggcctgtttgccatgctgctccttgct 1802

                                                        
Query: 65   ccggccgtcctggcatccgaccctgaccctctccaggacttctg 108
            |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1803 ccggccgtcctggcctccgaccctgaccctctccaggacttctg 1846
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>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa)
          Length = 970

 Score =  119 bits (60), Expect = 3e-24
 Identities = 120/140 (85%)
 Strand = Plus / Plus

                                                                       
Query: 5   caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 64
           ||||||||||| ||||| |||| ||||| || | |||||||| || ||||||||||||| 
Sbjct: 87  caagcaatgggttactctaaaaacctaggggctggcctgttcaccatgctgctccttgct 146

                                                                       
Query: 65  ccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgac 124
           |||||| || ||||  |||||||||||||||| ||||||||||| ||||| ||||| || 
Sbjct: 147 ccggccatcatggctaccgaccctgaccctctacaggacttctgcgtcgcggacctcgat 206

                               
Query: 125 ggcaaagcggtctcagtgaa 144
           ||||| |||||||| |||||
Sbjct: 207 ggcaaggcggtctcggtgaa 226
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>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds
          Length = 3761

 Score =  111 bits (56), Expect = 6e-22
 Identities = 119/140 (85%)
 Strand = Plus / Plus

                                                                        
Query: 5    caagcaatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgca 64
            ||||||||||||||||| |||| | |||||    || |||| ||| ||||||||||||| 
Sbjct: 1312 caagcaatggggtactctaaaaacatagcgtccggcatgtttgccatgctgctccttgct 1371

                                                                        
Query: 65   ccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgac 124
             | ||||||||| | ||| ||||| ||||||||||||||||||||||||||||||| || 
Sbjct: 1372 tcagccgtcctgtcctccaaccctcaccctctccaggacttctgtgtcgccgacctcgat 1431

                                
Query: 125  ggcaaagcggtctcagtgaa 144
            ||||| |||||||| |||||
Sbjct: 1432 ggcaaggcggtctcggtgaa 1451
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>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds
          Length = 603

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 80  tccgaccctgaccctctccaggacttctgtgtcgccgaccttgacggcaaagcggtctca 139
           |||||||| ||||| |||||||||||||| ||||| ||||| || ||||| |||||||| 
Sbjct: 1   tccgacccagacccactccaggacttctgcgtcgcggacctcgatggcaaggcggtctcg 60

                
Query: 140 gtgaa 144
           |||||
Sbjct: 61  gtgaa 65
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>ref|XM_469349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 82  cgaccctgaccctctccaggacttctgtgtcgccgacct 120
           |||||||||||||||||| |||||||| |||||||||||
Sbjct: 81  cgaccctgaccctctccaagacttctgcgtcgccgacct 119
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 82       cgaccctgaccctctccaggacttctgtgtcgccgacct 120
                |||||||||||||||||| |||||||| |||||||||||
Sbjct: 27488531 cgaccctgaccctctccaagacttctgcgtcgccgacct 27488493



 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 89       gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
                |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 27500448 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 27500408



 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 89       gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
                |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 27493128 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 27493088
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 82       cgaccctgaccctctccaggacttctgtgtcgccgacct 120
                |||||||||||||||||| |||||||| |||||||||||
Sbjct: 27579854 cgaccctgaccctctccaagacttctgcgtcgccgacct 27579816



 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 89       gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
                |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 27591771 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 27591731



 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                         
Query: 89       gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
                |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 27584451 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 27584411
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>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete
             sequence
          Length = 123406

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 82    cgaccctgaccctctccaggacttctgtgtcgccgacct 120
             |||||||||||||||||| |||||||| |||||||||||
Sbjct: 61983 cgaccctgaccctctccaagacttctgcgtcgccgacct 62021



 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 89    gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
             |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 57386 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 57426



 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 89    gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
             |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 50066 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 50106
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>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full
           insert sequence
          Length = 998

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 82  cgaccctgaccctctccaggacttctgtgtcgccgacct 120
           |||||||||||||||||| |||||||| |||||||||||
Sbjct: 207 cgaccctgaccctctccaagacttctgcgtcgccgacct 245
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>ref|XM_469352.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1017

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 89  gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
           |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 230 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 270
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>ref|XM_469350.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 690

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 89  gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
           |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 94  gaccctctccaggacttctgcgtcgccgacctcgacagcaa 134
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>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene)
          Length = 828

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 72  tcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgacggcaaag 131
           |||||||  |||||||||| || || ||||||||||| ||||||||||| || || || |
Sbjct: 59  tcctggccaccgaccctgatcccctgcaggacttctgcgtcgccgacctggatggaaagg 118

                        
Query: 132 cggtctcagtgaa 144
           || ||||||||||
Sbjct: 119 cgatctcagtgaa 131
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>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene)
          Length = 867

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                       
Query: 72  tcctggcatccgaccctgaccctctccaggacttctgtgtcgccgaccttgacggcaaag 131
           |||||||  |||||||||| || || ||||||||||| ||||||||||| || || || |
Sbjct: 59  tcctggccaccgaccctgatcccctgcaggacttctgcgtcgccgacctggatggaaagg 118

                        
Query: 132 cggtctcagtgaa 144
           || ||||||||||
Sbjct: 119 cgatctcagtgaa 131
to top
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full
           insert sequence
          Length = 1028

 Score = 58.0 bits (29), Expect = 8e-06
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 89  gaccctctccaggacttctgtgtcgccgaccttgacggcaa 129
           |||||||||||||||||||| ||||||||||| ||| ||||
Sbjct: 241 gaccctctccaggacttctgcgtcgccgacctcgacagcaa 281
to top
>gb|AY650052.1| Triticum monococcum germin-like protein 4 (GLP4) mRNA, complete cds
          Length = 944

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 80  tccgaccctgaccctctccaggacttctgtgtcgccgac 118
           |||||||||| ||||||||||||||| |||||| |||||
Sbjct: 119 tccgaccctggccctctccaggacttttgtgtcaccgac 157
to top
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene)
          Length = 868

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  tgctccttgcaccggccgtcctggcatccgaccctgaccctctccaggacttctgtgtcg 113
           |||||||||| ||  || |||||||  |||||||||| ||| | ||||||||||| || |
Sbjct: 41  tgctccttgctccatccatcctggccaccgaccctgatcctttgcaggacttctgcgttg 100

                                          
Query: 114 ccgaccttgacggcaaagcggtctcagtgaa 144
           | |||||  ||||||| ||| ||||||||||
Sbjct: 101 ctgacctcaacggcaaggcgatctcagtgaa 131
to top
>gb|AF250933.1|AF250933 Hordeum vulgare germin A (GerA) gene, complete cds
          Length = 1243

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 80  tccgaccctgaccctctccaggacttctgtgtcgccgac 118
           ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 283 tccgatcctgacccactccaggacttttgtgtcgccgac 321
to top
>ref|XM_476095.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 693

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 90  accctctccaggacttctgtgtcgccgacc 119
           ||||||||||||||||||| ||||||||||
Sbjct: 95  accctctccaggacttctgcgtcgccgacc 124
to top
>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07,
              complete sequence
          Length = 114135

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                            
Query: 90     accctctccaggacttctgtgtcgccgacc 119
              ||||||||||||||||||| ||||||||||
Sbjct: 111027 accctctccaggacttctgcgtcgccgacc 111056
to top
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04,
             complete sequence
          Length = 141171

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 90    accctctccaggacttctgtgtcgccgacc 119
             ||||||||||||||||||| ||||||||||
Sbjct: 41837 accctctccaggacttctgcgtcgccgacc 41866
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                             
Query: 90      accctctccaggacttctgtgtcgccgacc 119
               ||||||||||||||||||| ||||||||||
Sbjct: 5904263 accctctccaggacttctgcgtcgccgacc 5904292



 Score = 38.2 bits (19), Expect = 7.7
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                       
Query: 82       cgaccctgaccctctccaggacttctgtgtcgccgacct 120
                |||||||||||  ||||||||| |||| ||||| |||||
Sbjct: 11366905 cgaccctgacctgctccaggacatctgcgtcgctgacct 11366943
to top
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene)
          Length = 934

 Score = 44.1 bits (22), Expect = 0.13
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                 
Query: 10  aatggggtactccaaaaccctagcggttagcctgttcgccgtgctgctccttgc 63
           ||||| ||||| |||||||||||||| | |||| |||||| ||||  |||||||
Sbjct: 102 aatggcgtacttcaaaaccctagcggctggcctcttcgccttgctattccttgc 155
to top
>emb|AL512363.11| Human DNA sequence from clone RP11-524H19 on chromosome 6 Contains the
             3' end of transforming protein P21A (K-RAS) (C-K-RAS)
             pseudogene, a novel gene, the 5' end of the gene for a
             novel protein and a CpG island, complete sequence
          Length = 113075

 Score = 42.1 bits (21), Expect = 0.49
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 85    ccctgaccctctccaggactt 105
             |||||||||||||||||||||
Sbjct: 90341 ccctgaccctctccaggactt 90361
to top
>ref|XM_323778.1| Neurospora crassa OR74A hypothetical protein (NCU04426.1) partial
           mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  cgtcctggcatccgaccctg 89
           ||||||||||||||||||||
Sbjct: 950 cgtcctggcatccgaccctg 969
to top
>ref|XM_952410.1| Neurospora crassa OR74A hypothetical protein (NCU04426.1) partial
           mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 70  cgtcctggcatccgaccctg 89
           ||||||||||||||||||||
Sbjct: 950 cgtcctggcatccgaccctg 969
to top
>emb|Y15962.1|HVGLP1 Hordeum vulgare mRNA for germin-like protein 1
          Length = 833

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  ccaggacttctgtgtcgccgacct 120
           |||||||||||| |||||||||||
Sbjct: 102 ccaggacttctgcgtcgccgacct 125
to top
>emb|BX908808.1| Neurospora crassa DNA linkage group IV Cosmid contig G21B4
          Length = 177225

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     cgtcctggcatccgaccctg 89
              ||||||||||||||||||||
Sbjct: 122490 cgtcctggcatccgaccctg 122509
to top
>emb|AJ319659.1|TAE319659 Triticum aestivum mRNA for adenosine diphosphate glucose
           pyrophosphatase
          Length = 642

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  ccaggacttctgtgtcgccgacct 120
           |||||||||||| |||||||||||
Sbjct: 75  ccaggacttctgcgtcgccgacct 98
to top
>emb|AJ291451.1|HVU291451 Hordeum vulgare mRNA for adenosine diphosphate glucose
           pyrophosphatase (sagppase gene)
          Length = 639

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  ccaggacttctgtgtcgccgacct 120
           |||||||||||| |||||||||||
Sbjct: 72  ccaggacttctgcgtcgccgacct 95
to top
>emb|AJ237943.1|TAE237943 Triticum aestivum mRNA for germin-like protein 2b
          Length = 948

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  ctccaggacttctgtgtcgccgac 118
           ||||||||||| ||||||||||||
Sbjct: 153 ctccaggacttttgtgtcgccgac 176
to top
>gb|AY098510.1| Ananas comosus germin-like protein mRNA, complete cds
          Length = 783

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 89  gaccctctccaggacttctgtgtcgccgacct 120
           |||||||| ||||||||||| |||||| ||||
Sbjct: 105 gaccctctgcaggacttctgcgtcgccaacct 136
to top
>ref|XM_480456.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 678

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 77  gcatccgaccctgaccctctccaggacttctgtgt 111
           ||||| ||||||  |||||| ||||||||||||||
Sbjct: 67  gcatctgaccctagccctctgcaggacttctgtgt 101
to top
>ref|XM_476264.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 82  cgaccctgaccctctccaggacttctgtgtcgccgacct 120
           |||||||||||  ||||||||| |||| ||||| |||||
Sbjct: 78  cgaccctgacctgctccaggacatctgcgtcgctgacct 116
to top
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    ccttgcaccggccgtcctg 76
             |||||||||||||||||||
Sbjct: 15656 ccttgcaccggccgtcctg 15638
to top
>ref|XM_600204.2| PREDICTED: Bos taurus similar to potassium channel, subfamily K,
            member 12 (LOC521931), mRNA
          Length = 2867

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   gcctgttcgccgtgctgct 57
            |||||||||||||||||||
Sbjct: 2102 gcctgttcgccgtgctgct 2120
to top
>gb|BC047749.1| Homo sapiens potassium channel, subfamily K, member 12, mRNA (cDNA
           clone MGC:54139 IMAGE:6186991), complete cds
          Length = 1450

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  gcctgttcgccgtgctgct 57
           |||||||||||||||||||
Sbjct: 690 gcctgttcgccgtgctgct 708
to top
>gb|AC145273.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0055E23, complete sequence
          Length = 156572

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                    
Query: 82    cgaccctgaccctctccaggacttctgtgtcgccgacct 120
             |||||||||||  ||||||||| |||| ||||| |||||
Sbjct: 92182 cgaccctgacctgctccaggacatctgcgtcgctgacct 92220
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 40      cctgttcgccgtgctgctc 58
               |||||||||||||||||||
Sbjct: 5260349 cctgttcgccgtgctgctc 5260367
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 40      cctgttcgccgtgctgctc 58
               |||||||||||||||||||
Sbjct: 5115098 cctgttcgccgtgctgctc 5115116
to top
>ref|NM_022055.1| Homo sapiens potassium channel, subfamily K, member 12 (KCNK12),
           mRNA
          Length = 1449

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  gcctgttcgccgtgctgct 57
           |||||||||||||||||||
Sbjct: 662 gcctgttcgccgtgctgct 680
to top
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 40      cctgttcgccgtgctgctc 58
               |||||||||||||||||||
Sbjct: 4969273 cctgttcgccgtgctgctc 4969291
to top
>ref|XM_824419.1| Trypanosoma brucei TREU927 cleavage and polyadenylation specificity
            factor-like protein (Tb11.01.6170) partial mRNA
          Length = 4359

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   gcggttagcctgttcgccg 50
            |||||||||||||||||||
Sbjct: 4095 gcggttagcctgttcgccg 4077
to top
>ref|XM_538919.2| PREDICTED: Canis familiaris similar to taube nuss (LOC481798), mRNA
          Length = 1122

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 126 gcaaagcggtctcagtgaatggtcatc 152
           ||||||||||||||| | |||||||||
Sbjct: 520 gcaaagcggtctcagaggatggtcatc 546
to top
>ref|XM_538483.2| PREDICTED: Canis familiaris similar to potassium channel, subfamily
           K, member 12 (LOC481362), mRNA
          Length = 1445

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  gcctgttcgccgtgctgct 57
           |||||||||||||||||||
Sbjct: 690 gcctgttcgccgtgctgct 708
to top
>gb|AC009600.20| Homo sapiens 2 BAC RP11-436K12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 217304

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 39     gcctgttcgccgtgctgct 57
              |||||||||||||||||||
Sbjct: 124693 gcctgttcgccgtgctgct 124675
to top
>gb|AY394010.1| Zea mays germin-like protein (glp1) gene, promoter region and
            complete cds
          Length = 2490

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 98   caggacttctgtgtcgccgacct 120
            ||||||||||| |||||||||||
Sbjct: 1527 caggacttctgcgtcgccgacct 1549
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 39      gcctgttcgccgtgctgct 57
               |||||||||||||||||||
Sbjct: 1827680 gcctgttcgccgtgctgct 1827662
to top
>gb|AC104390.6| Homo sapiens chromosome 15, clone CTD-2643K12, complete sequence
          Length = 201225

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 94    tctccaggacttctgtgtc 112
             |||||||||||||||||||
Sbjct: 26140 tctccaggacttctgtgtc 26122
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 109    tgtcgccgaccttgacggc 127
              |||||||||||||||||||
Sbjct: 693867 tgtcgccgaccttgacggc 693885
to top
>emb|BX649604.1|MAD7PMMO Methylocystis strain SC2 clone, complete sequence
          Length = 18385

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    cctgttcgccgtgctgctc 58
             |||||||||||||||||||
Sbjct: 11290 cctgttcgccgtgctgctc 11308
to top
>gb|AC008427.9| Homo sapiens chromosome 5 clone CTC-307M15, complete sequence
          Length = 175501

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     cctgaccctctccaggact 104
              |||||||||||||||||||
Sbjct: 144674 cctgaccctctccaggact 144692
to top
>gb|AC124316.32| Mus musculus chromosome 17, clone RP24-222O13, complete sequence
          Length = 223552

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    gcctgttcgccgtgctgct 57
             |||||||||||||||||||
Sbjct: 32255 gcctgttcgccgtgctgct 32237
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                  
Query: 77      gcatccgaccctgaccctctccaggacttctgtgt 111
               ||||| ||||||  |||||| ||||||||||||||
Sbjct: 5232794 gcatctgaccctagccctctgcaggacttctgtgt 5232828
to top
>gb|AF287302.1|AF287302 Homo sapiens tandem pore domain potassium channel THIK-2 (KCNK12)
           mRNA, complete cds
          Length = 1449

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 39  gcctgttcgccgtgctgct 57
           |||||||||||||||||||
Sbjct: 662 gcctgttcgccgtgctgct 680
to top
>gb|AF287300.1|AF287300 Rattus norvegicus tandem pore domain potassium channel THIK-2
            (Kcnk12) mRNA, complete cds
          Length = 1900

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   gcctgttcgccgtgctgct 57
            |||||||||||||||||||
Sbjct: 1151 gcctgttcgccgtgctgct 1169
to top
>ref|NM_022292.1| Rattus norvegicus potassium channel, subfamily K, member 12 (Kcnk12),
            mRNA
          Length = 1900

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   gcctgttcgccgtgctgct 57
            |||||||||||||||||||
Sbjct: 1151 gcctgttcgccgtgctgct 1169
to top
>ref|NM_199251.1| Mus musculus potassium channel, subfamily K, member 12 (Kcnk12), mRNA
          Length = 1952

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   gcctgttcgccgtgctgct 57
            |||||||||||||||||||
Sbjct: 1202 gcctgttcgccgtgctgct 1220
to top
>gb|AC138655.1| Homo sapiens BAC clone RP11-436K12 from 2, complete sequence
          Length = 139150

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 39    gcctgttcgccgtgctgct 57
             |||||||||||||||||||
Sbjct: 46540 gcctgttcgccgtgctgct 46522
to top
>gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, complete sequence
          Length = 181413

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 94    tctccaggacttctgtgtc 112
             |||||||||||||||||||
Sbjct: 32212 tctccaggacttctgtgtc 32230
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 112     cgccgaccttgacggcaaa 130
               |||||||||||||||||||
Sbjct: 1940067 cgccgaccttgacggcaaa 1940085
to top
>dbj|AB052939.1| Mus musculus mntk1 mRNA, complete cds
          Length = 1952

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 39   gcctgttcgccgtgctgct 57
            |||||||||||||||||||
Sbjct: 1202 gcctgttcgccgtgctgct 1220
to top
>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1099H05
          Length = 186036

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                 
Query: 77     gcatccgaccctgaccctctccaggacttctgtgt 111
              ||||| ||||||  |||||| ||||||||||||||
Sbjct: 101150 gcatctgaccctagccctctgcaggacttctgtgt 101184
to top
>dbj|AP005505.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0610E02
          Length = 135816

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                                
Query: 77    gcatccgaccctgaccctctccaggacttctgtgt 111
             ||||| ||||||  |||||| ||||||||||||||
Sbjct: 24382 gcatctgaccctagccctctgcaggacttctgtgt 24416
to top
>dbj|AK105351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A07, full
           insert sequence
          Length = 840

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 34/39 (87%)
 Strand = Plus / Plus

                                                  
Query: 82  cgaccctgaccctctccaggacttctgtgtcgccgacct 120
           |||||||||||  ||||||||| |||| ||||| |||||
Sbjct: 107 cgaccctgacctgctccaggacatctgcgtcgctgacct 145
to top
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 109     tgtcgccgaccttgacggc 127
               |||||||||||||||||||
Sbjct: 1240921 tgtcgccgaccttgacggc 1240939
to top
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene
             island PAGI-3(SG)
          Length = 128136

 Score = 38.2 bits (19), Expect = 7.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    tgttcgccgtgctgctcct 60
             |||||||||||||||||||
Sbjct: 79425 tgttcgccgtgctgctcct 79407


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 837,228
Number of Sequences: 3902068
Number of extensions: 837228
Number of successful extensions: 76734
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76276
Number of HSP's gapped (non-prelim): 457
length of query: 160
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 138
effective length of database: 17,147,199,772
effective search space: 2366313568536
effective search space used: 2366313568536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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