ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AROC_ENTFA (Q834S2) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 35 0.15
2AROC2_BACCR (Q81C42) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp... 34 0.25
3AROC_BACHD (Q9KCB7) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 34 0.33
4AROC1_BACCZ (Q63DL6) Chorismate synthase 1 (EC 4.2.3.5) (5-enolp... 33 0.73
5NU6M_GADMO (P55783) NADH-ubiquinone oxidoreductase chain 6 (EC 1... 32 0.96
6AROC_BACSU (P31104) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 32 0.96
7AROC2_BACHK (Q6HHF5) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp... 32 0.96
8AROC2_BACCZ (Q63A04) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp... 32 0.96
9AROC2_BACC1 (Q736A4) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp... 32 0.96
10AROC2_BACAN (Q81P61) Chorismate synthase 2 (EC 4.2.3.5) (5-enolp... 32 0.96
11AROC_BACLD (Q65I28) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 32 1.3
12WSC3_YEAST (Q12215) Cell wall integrity and stress response comp... 32 1.6
13AROC1_BACHK (Q6HL39) Chorismate synthase 1 (EC 4.2.3.5) (5-enolp... 31 2.8
14AROC1_BACCR (Q81FQ3) Chorismate synthase 1 (EC 4.2.3.5) (5-enolp... 31 2.8
15AROC1_BACAN (Q81SV7) Chorismate synthase 1 (EC 4.2.3.5) (5-enolp... 31 2.8
16CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2) 30 3.6
17AROC_GEOKA (Q5KXU4) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 30 4.8
18AROC1_BACC1 (Q73AX9) Chorismate synthase 1 (EC 4.2.3.5) (5-enolp... 30 4.8
19YH19_YEAST (P38900) Hypothetical 70.1 kDa protein in PUR5 3'region 30 4.8
20CRAC_DICDI (P35401) Protein CRAC 30 6.2
21YS89_CAEEL (Q09624) Hypothetical protein ZK945.9 30 6.2
22CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48) 30 6.2
23PURL_MYCPA (Q743F0) Phosphoribosylformylglycinamidine synthase I... 29 8.1
24DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4) (SAP... 29 8.1
25RL10_HELPY (P56036) 50S ribosomal protein L10 29 8.1
26RL10_HELPJ (Q9ZK22) 50S ribosomal protein L10 29 8.1
27GAK3_HUMAN (Q9YNA8) HERV-K_19q12 provirus ancestral Gag polyprot... 29 8.1
28PURL_MYCTU (P0A5T8) Phosphoribosylformylglycinamidine synthase I... 29 8.1
29PURL_MYCBO (P0A5T9) Phosphoribosylformylglycinamidine synthase I... 29 8.1

>AROC_ENTFA (Q834S2) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 388

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 327 GIDVDDMLLWDQLRTSYIRTQ--LSTDVGSVGAGIPIIARSTTVSNRD-YTPSSTASVGT 497
           G  V D ++WD+  T Y RT   L    G +  G+PII R         Y P  + ++ T
Sbjct: 269 GSQVMDEIVWDE-STGYTRTSNNLGGFEGGMTNGMPIIVRGVMKPIPTLYKPLQSVNIDT 327

Query: 498 NSGTSKSIEKSDQTA 542
                 S+E+SD TA
Sbjct: 328 KEPYKASVERSDSTA 342



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>AROC2_BACCR (Q81C42) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G  V D +LWD+ +    RT  +  + G +  G+PII R         Y P ++ 
Sbjct: 266 AARQPGSKVHDEILWDEEKGYTRRTNNAGGLEGGMTTGMPIIVRGVMKPIPTLYKPLASV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T      SIE+SD  A
Sbjct: 326 DIDTKEAFQASIERSDSCA 344



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>AROC_BACHD (Q9KCB7) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 390

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQ-LSTDVGSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G +V D + WD+ R  Y ++  L    G +  G+PI+ R         Y P  + 
Sbjct: 266 AASKPGSEVHDEIAWDEERGYYRKSNNLGGFEGGMTNGMPIVVRGVMKPIPTLYKPLQSV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T    + SIE+SD  A
Sbjct: 326 DIATKEPFAASIERSDSCA 344



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>AROC1_BACCZ (Q63DL6) Chorismate synthase 1 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 1)
          Length = 390

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G +V D +LWD+      RT  +  + G +  G+PI+ R         Y P  + 
Sbjct: 266 AAHRPGSEVHDEILWDEEHGYTRRTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLQSV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T    + SIE+SD  A
Sbjct: 326 DIDTKEPFTASIERSDSCA 344



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>NU6M_GADMO (P55783) NADH-ubiquinone oxidoreductase chain 6 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 6)
          Length = 173

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 293 AWTVWSVHRHPGGAVGWFHLVSGAGSVFW-DVLEGACWHNHETLEFMVISS 144
           AW  WSV    G  +G+  LV GAGS FW    EG      E +EF V+++
Sbjct: 81  AWGEWSVL---GSVLGYLLLVVGAGSWFWGGWYEGMWVPVDELIEFSVVAA 128



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>AROC_BACSU (P31104) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
           (Vegetative protein 216) (VEG216)
          Length = 369

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
 Frame = +3

Query: 327 GIDVDDMLLWDQLRTSYIRT--QLSTDVGSVGAGIPIIARSTTVSNRD-YTPSSTASVGT 497
           G +V D ++WD+ +  Y R   +L    G +  G+PI+ R         Y P  +  + T
Sbjct: 271 GSEVHDEIIWDEEK-GYTRATNRLGGLEGGMTTGMPIVVRGVMKPIPTLYKPLKSVDIET 329

Query: 498 NSGTSKSIEKSDQTA 542
               S SIE+SD  A
Sbjct: 330 KEPFSASIERSDSCA 344



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>AROC2_BACHK (Q6HHF5) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G  V D +LWD+ +    +T  +  + G +  G+PI+ R         Y P ++ 
Sbjct: 266 AARQPGSKVHDEILWDEEQGYTRKTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLASV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T      SIE+SD  A
Sbjct: 326 DIDTKEAFQASIERSDSCA 344



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>AROC2_BACCZ (Q63A04) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G  V D +LWD+ +    +T  +  + G +  G+PI+ R         Y P ++ 
Sbjct: 266 AARQPGSKVHDEILWDEEQGYTRKTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLASV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T      SIE+SD  A
Sbjct: 326 DIDTKEAFQASIERSDSCA 344



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>AROC2_BACC1 (Q736A4) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G  V D +LWD+ +    +T  +  + G +  G+PI+ R         Y P ++ 
Sbjct: 266 AARQPGSKVHDEILWDEEQGYTRKTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLASV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T      SIE+SD  A
Sbjct: 326 DIDTKEAFQASIERSDSCA 344



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>AROC2_BACAN (Q81P61) Chorismate synthase 2 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 2)
          Length = 390

 Score = 32.3 bits (72), Expect = 0.96
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G  V D +LWD+ +    +T  +  + G +  G+PI+ R         Y P ++ 
Sbjct: 266 AARQPGSKVHDEILWDEEQGYTRKTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLASV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T      SIE+SD  A
Sbjct: 326 DIDTKEAFQASIERSDSCA 344



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>AROC_BACLD (Q65I28) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 390

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRT--QLSTDVGSVGAGIPIIARSTTVSNRD-YTPSST 482
           A+   G +V D ++WD+ +  Y R   +L    G +  G+PI+ R         Y P  +
Sbjct: 266 AARKNGSEVHDEIIWDEEK-GYTRATNRLGGLEGGMTTGMPIVVRGVMKPIPTLYKPLKS 324

Query: 483 ASVGTNSGTSKSIEKSDQTA 542
             + T    + SIE+SD  A
Sbjct: 325 VDIETKEPFTASIERSDSCA 344



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>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3|
           precursor
          Length = 556

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
 Frame = +3

Query: 240 KPSNSTAWVPMNRPH---GPCSSTSSRASEDMGIDVDDMLLWDQLRTSYIRTQLSTDVGS 410
           K  +ST+++P           SST+ R S DM     +M+      TS   +  S+   S
Sbjct: 145 KEGSSTSYMPSTTSSLSSAQISSTTRRTSTDM--KSSEMIATTVSTTSTTSSSTSSTTSS 202

Query: 411 VGAGIPI-IARSTTVSNRDYTPSSTASVGTNSGTSKSIEKSDQTATN 548
             +        STT S+   T SST S  T+S TS +   +  + T+
Sbjct: 203 TTSSTTSSTTSSTTSSSTSSTTSSTTSSTTSSTTSSTTSSTTSSTTS 249



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>AROC1_BACHK (Q6HL39) Chorismate synthase 1 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 1)
          Length = 390

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G +V D +LW++      RT  +  + G +  G+PI+ R         Y P  + 
Sbjct: 266 AAHRPGSEVHDEILWNEEHGYTRRTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLQSV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T    + SIE+SD  A
Sbjct: 326 DIDTKEPFTASIERSDSCA 344



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>AROC1_BACCR (Q81FQ3) Chorismate synthase 1 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 1)
          Length = 390

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G +V D +LW++      RT  +  + G +  G+PI+ R         Y P  + 
Sbjct: 266 AAHRPGSEVHDEILWNEEHGYTRRTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLQSV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T    + SIE+SD  A
Sbjct: 326 DIDTKEPFTASIERSDSCA 344



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>AROC1_BACAN (Q81SV7) Chorismate synthase 1 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 1)
          Length = 390

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 312 ASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GSVGAGIPIIARSTTVSNRD-YTPSSTA 485
           A+   G +V D +LW++      RT  +  + G +  G+PI+ R         Y P  + 
Sbjct: 266 AAHRPGSEVHDEILWNEEHGYTRRTNNAGGLEGGMTTGMPIVVRGVMKPIPTLYKPLQSV 325

Query: 486 SVGTNSGTSKSIEKSDQTA 542
            + T    + SIE+SD  A
Sbjct: 326 DIDTKEPFTASIERSDSCA 344



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>CTTB2_HUMAN (Q8WZ74) Cortactin-binding protein 2 (CortBP2)|
          Length = 1663

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +3

Query: 183 PTSSLKHIPEDA---TCSGHKVKPSNSTAWVPMNRPHGPCSSTS 305
           PTSS   +P +A   T     + P NS A  PM+  H PC++TS
Sbjct: 394 PTSSTPPLPSNAAPPTAQTPGIAPQNSQA-PPMHSLHSPCANTS 436



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>AROC_GEOKA (Q5KXU4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 388

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
 Frame = +3

Query: 234 KVKPSNSTAWVPMNRPHGPCSSTSSRASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GS 410
           K+    + A V +N   G        A+   G +V D ++W   +    RT  +    G 
Sbjct: 238 KLDAKIAAAIVSINAFKGVEFGIGFEAARRPGSEVHDEIIWSPEQGFSRRTNRAGGFEGG 297

Query: 411 VGAGIPIIARSTTVSNRD-YTPSSTASVGTNSGTSKSIEKSDQTA 542
           V  G+PI+ R         Y P  +  + T    + SIE+SD  A
Sbjct: 298 VTTGMPIVVRGVMKPIPTLYKPLQSVDIETKEPFAASIERSDSCA 342



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>AROC1_BACC1 (Q73AX9) Chorismate synthase 1 (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase 1)
          Length = 390

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
 Frame = +3

Query: 234 KVKPSNSTAWVPMNRPHGPCSSTSSRASEDMGIDVDDMLLWDQLRTSYIRTQLSTDV-GS 410
           K+    + A + +N   G        A+   G +V D ++W++      RT  +  + G 
Sbjct: 240 KLDAKLAAAMMSINAFKGVEIGIGFEAAHRPGSEVHDEIVWNEEHGYTRRTNNAGGLEGG 299

Query: 411 VGAGIPIIARSTTVSNRD-YTPSSTASVGTNSGTSKSIEKSDQTA 542
           +  G+PI+ R         Y P  +  + T    + SIE+SD  A
Sbjct: 300 MTTGMPIVVRGVMKPIPTLYKPLQSVDIDTKEPFTASIERSDSCA 344



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>YH19_YEAST (P38900) Hypothetical 70.1 kDa protein in PUR5 3'region|
          Length = 624

 Score = 30.0 bits (66), Expect = 4.8
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
 Frame = +3

Query: 294 SSTSSRASEDMGIDVD-DMLLWDQLRTSYIRTQLSTDVGSVGAGIPIIARSTTVSNRDYT 470
           S++S R  +    D D D  +      S   T  S+   +  A I +   +TT ++ +  
Sbjct: 58  SNSSDRCRKYCSSDEDSDTCIHGSANASTNATTNSSTNATTTASINVRTSATTTASINVR 117

Query: 471 PSSTASVGTNSGTSKSIEKSDQTATN 548
            S+T +  TNS T+ +  +S  ++TN
Sbjct: 118 TSATTTESTNSNTNATTTESTNSSTN 143



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>CRAC_DICDI (P35401) Protein CRAC|
          Length = 697

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 351 LWDQLRTSYIRTQLSTDVGSVGAGIPIIARSTTVSNRDYTPSSTASVGTNSGTSKSIEKS 530
           +WD  + S++     + VG+ G G    ++ST     +   SST+S+ + S +S S  K 
Sbjct: 573 IWDPTKQSFLNIPFKSRVGATGGGSVPSSQST-----NNLQSSTSSMSSLSSSSTSTTKR 627

Query: 531 DQTAT 545
               T
Sbjct: 628 SHPTT 632



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>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9|
          Length = 3178

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 30/103 (29%), Positives = 43/103 (41%)
 Frame = +3

Query: 237  VKPSNSTAWVPMNRPHGPCSSTSSRASEDMGIDVDDMLLWDQLRTSYIRTQLSTDVGSVG 416
            V  S ST+ V      G  SS SS  S   GI+    L       S   +  ++D G+  
Sbjct: 868  VADSTSTSEVTSTTSTGS-SSESSAISTTSGIESTSTLEASTTDASQDSSTSTSDSGTT- 925

Query: 417  AGIPIIARSTTVSNRDYTPSSTASVGTNSGTSKSIEKSDQTAT 545
                  + STT+ + + TPS++ S G +   S S   SD   T
Sbjct: 926  ------SDSTTIDSSNSTPSTSDSSGLSQTPSDSSSASDSMRT 962



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>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +3

Query: 387  QLSTDVGSVGAGIPIIARSTTVSNRDYTPSSTASVGTNS 503
            Q  T V +   G P+   + ++ NR  TPSS AS  TNS
Sbjct: 947  QQPTPVHAQPPGTPLSQAAASIDNRVPTPSSVASAETNS 985



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>PURL_MYCPA (Q743F0) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 765

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 IQQHRLGA-DEPTTRSMLINVVEGIRGYGH 331
           + Q R GA D P TR +L  VV GI GYG+
Sbjct: 150 MDQLRFGAADAPDTRRVLDGVVRGIGGYGN 179



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>DLGP4_RAT (P97839) Disks large-associated protein 4 (DAP-4)|
           (SAP90/PSD-95-associated protein 4) (SAPAP4)
           (PSD-95/SAP90-binding protein 4)
          Length = 992

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
 Frame = +3

Query: 297 STSSRASEDMGIDVDDMLLWDQLRT-SYIRTQLSTDVGSVGAGIPIIARSTTVSNRDYTP 473
           ST+  +  DM    +  +   ++R+ SYI+     D    G G P  +  T    + Y  
Sbjct: 341 STTLLSPRDMDSTAEGPIPCRRMRSGSYIKAMGDEDSDESGGGSPKPSPKTAARRQSYLR 400

Query: 474 SSTASVGTNSGTSKSIEKSD 533
           ++  S+G  S   +S+++ D
Sbjct: 401 ATQQSLGEQSNPRRSLDRLD 420



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>RL10_HELPY (P56036) 50S ribosomal protein L10|
          Length = 164

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -1

Query: 110 QDDQKQHRLQRGGLHDHELISCVHVRAMF-----DELMGWL 3
           Q + K H + + GL D E +S  HV A+      +ELMG L
Sbjct: 99  QKEHKDHFVLKAGLFDKESVSVAHVEAVSKLPSKEELMGML 139



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>RL10_HELPJ (Q9ZK22) 50S ribosomal protein L10|
          Length = 164

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -1

Query: 110 QDDQKQHRLQRGGLHDHELISCVHVRAMF-----DELMGWL 3
           Q + K H + + GL D E +S  HV A+      +ELMG L
Sbjct: 99  QKEHKDHFVLKAGLFDKESVSVAHVEAVSKLPSKEELMGML 139



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>GAK3_HUMAN (Q9YNA8) HERV-K_19q12 provirus ancestral Gag polyprotein (Gag|
           polyprotein) (HERV-K(C19) Gag protein) [Contains: Matrix
           protein; Capsid protein; Nucleocapsid protein]
          Length = 665

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 193 PSSTSQKTLPAPDTR*NHPTAPPGCR*TD-HTVHAHQRRRGHQRIW 327
           P+   +   P P TR  +PTAPP  R ++ H +    R+ G    W
Sbjct: 234 PAPQGRAPYPQPPTRRLNPTAPPSRRGSELHEIIDKSRKEGDTEAW 279



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>PURL_MYCTU (P0A5T8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 754

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 IQQHRLGA-DEPTTRSMLINVVEGIRGYGH 331
           + Q R GA D P TR +L  VV GI GYG+
Sbjct: 139 MDQLRFGAADAPDTRRVLDGVVRGIGGYGN 168



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>PURL_MYCBO (P0A5T9) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 754

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 245 IQQHRLGA-DEPTTRSMLINVVEGIRGYGH 331
           + Q R GA D P TR +L  VV GI GYG+
Sbjct: 139 MDQLRFGAADAPDTRRVLDGVVRGIGGYGN 168


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,823,240
Number of Sequences: 219361
Number of extensions: 1854838
Number of successful extensions: 5572
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5565
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4700377760
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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