ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_463898.1| Oryza sativa (japonica cultivar-group), mRNA 262 1e-66
2ref|XM_506688.1| PREDICTED Oryza sativa (japonica cultivar-group... 262 1e-66
3dbj|AK102774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
4dbj|AK060055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 1e-66
5ref|XM_481225.1| Oryza sativa (japonica cultivar-group), mRNA 137 5e-29
6dbj|AK072643.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 5e-29
7gb|AY110255.1| Zea mays CL3925_1 mRNA sequence 119 1e-23
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
9dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
10dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic D... 101 3e-18
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
12dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
13gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 46 0.13
14dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complet... 44 0.51
15gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.51
16ref|XM_468088.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
17ref|XM_969869.1| PREDICTED: Tribolium castaneum similar to CG606... 42 2.0
18gb|AC097268.10| Pan troglodytes BAC RP43-43O8 (Roswell Park Can... 42 2.0
19dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.0
20dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
21gb|AY110761.1| Zea mays CL9510_1 mRNA sequence 42 2.0
22ref|NM_203144.1| Arabidopsis thaliana unknown protein AT5G42920 ... 40 7.9
23ref|NM_123657.2| Arabidopsis thaliana unknown protein AT5G42920 ... 40 7.9
24gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 7.9
25gb|DQ214422.1| Taeniopygia guttata clone 0058P0011A02 cytochrome... 40 7.9
26gb|DQ214421.1| Taeniopygia guttata clone 0058P0004A06 cytochrome... 40 7.9
27gb|DQ214420.1| Taeniopygia guttata clone 0058P0057H03 cytochrome... 40 7.9
28gb|DQ214419.1| Taeniopygia guttata clone 0058P0038D08 cytochrome... 40 7.9
29gb|BC058353.1| Mus musculus cell cycle related kinase, mRNA (cDN... 40 7.9
30gb|AE007271.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 7.9
31gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.9
32gb|AC131649.2| Homo sapiens chromosome 16 clone RP11-609N14, com... 40 7.9
33gb|AY330485.1| Saccharopolyspora erythraea amino acid permease g... 40 7.9
34gb|AY091346.1| Arabidopsis thaliana unknown protein (At5g42920) ... 40 7.9
35gb|AY039925.1| Arabidopsis thaliana unknown protein (At5g42920) ... 40 7.9
36emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.9
37emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 7.9
38emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 40 7.9
39emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 7.9
40emb|AJ009971.2|SFR9971 Streptomyces fradiae orf, tlrB and tylN g... 40 7.9
41dbj|AB219524.1| Pseudomonas aeruginosa MexPQ-OpmE operon (mexP, ... 40 7.9
42gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 7.9
43gb|AC161421.3| Mus musculus BAC clone RP24-424A8 from chromosome... 40 7.9
44dbj|AK078262.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.9
45gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.9
46gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.9
47dbj|AK044470.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 40 7.9
48gb|DP000030.1| Sus scrofa target 116 genomic scaffold 40 7.9
49gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome... 40 7.9
50gb|AC027277.5| Homo sapiens chromosome 16 clone RP11-27M24, comp... 40 7.9
51gb|AE004772.1| Pseudomonas aeruginosa PAO1, section 333 of 529 o... 40 7.9
52gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.9
53dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.9
54dbj|AK057952.1| Homo sapiens cDNA FLJ25223 fis, clone STM00880 40 7.9
55ref|NM_210091.1| Eremothecium gossypii AEL124Wp (AEL124W), mRNA 40 7.9
56gb|AF055922.1|AF055922 Streptomyces fradiae dipeptidil carboxype... 40 7.9
57emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on ch... 40 7.9
58dbj|AB085583.1| Pseudomonas aeruginosa opmE gene for putative ou... 40 7.9
59emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chr... 40 7.9
60gb|AC155292.2| Mus musculus BAC clone RP24-440O21 from chromosom... 40 7.9
61gb|M20568.1|AVINIFC A.vinelandii major nif gene cluster encoding... 40 7.9
62gb|M17349.1|AVINIFUSV A.vinelandii nitrogen fixation genes U, S,... 40 7.9 
>ref|XM_463898.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1049

 Score =  262 bits (132), Expect = 1e-66
 Identities = 309/368 (83%)
 Strand = Plus / Plus

                                                                       
Query: 214 atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
           |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 156 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 215

                                                                       
Query: 274 gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
           |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 216 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 275

                                                                       
Query: 334 cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
           ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 276 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 335

                                                                       
Query: 394 gaggggatgctcgccaggcttccccccaaatctatcaccgacaaggagctgcataagcgc 453
           ||||   ||||  ||||| |||| ||||| || ||||| ||||||||| |||||||||| 
Sbjct: 336 gaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataagcga 395

                                                                       
Query: 454 cgagacatgctttctaatttgaaatctagagcaaaacagatggcggaaagtttcaacatg 513
           | |||||||||||| ||| |||||||||||||||| ||||||||   |||||||||||||
Sbjct: 396 caagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatg 455

                                                                       
Query: 514 tcaaccttcgccaacagggaggatttgcttggtcagagtaagaaagctgctgatgacatg 573
           |||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 456 tcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgatatg 515

                   
Query: 574 agcagagt 581
           || |||||
Sbjct: 516 agtagagt 523
to top
>ref|XM_506688.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1217_F02.19
           mRNA
          Length = 1130

 Score =  262 bits (132), Expect = 1e-66
 Identities = 309/368 (83%)
 Strand = Plus / Plus

                                                                       
Query: 214 atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
           |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 146 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 205

                                                                       
Query: 274 gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
           |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 206 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 265

                                                                       
Query: 334 cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
           ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 266 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 325

                                                                       
Query: 394 gaggggatgctcgccaggcttccccccaaatctatcaccgacaaggagctgcataagcgc 453
           ||||   ||||  ||||| |||| ||||| || ||||| ||||||||| |||||||||| 
Sbjct: 326 gaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataagcga 385

                                                                       
Query: 454 cgagacatgctttctaatttgaaatctagagcaaaacagatggcggaaagtttcaacatg 513
           | |||||||||||| ||| |||||||||||||||| ||||||||   |||||||||||||
Sbjct: 386 caagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatg 445

                                                                       
Query: 514 tcaaccttcgccaacagggaggatttgcttggtcagagtaagaaagctgctgatgacatg 573
           |||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 446 tcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgatatg 505

                   
Query: 574 agcagagt 581
           || |||||
Sbjct: 506 agtagagt 513
to top
>dbj|AK102774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107H09, full
           insert sequence
          Length = 1130

 Score =  262 bits (132), Expect = 1e-66
 Identities = 309/368 (83%)
 Strand = Plus / Plus

                                                                       
Query: 214 atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
           |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 146 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 205

                                                                       
Query: 274 gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
           |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 206 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 265

                                                                       
Query: 334 cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
           ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 266 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 325

                                                                       
Query: 394 gaggggatgctcgccaggcttccccccaaatctatcaccgacaaggagctgcataagcgc 453
           ||||   ||||  ||||| |||| ||||| || ||||| ||||||||| |||||||||| 
Sbjct: 326 gaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataagcga 385

                                                                       
Query: 454 cgagacatgctttctaatttgaaatctagagcaaaacagatggcggaaagtttcaacatg 513
           | |||||||||||| ||| |||||||||||||||| ||||||||   |||||||||||||
Sbjct: 386 caagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatg 445

                                                                       
Query: 514 tcaaccttcgccaacagggaggatttgcttggtcagagtaagaaagctgctgatgacatg 573
           |||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 446 tcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgatatg 505

                   
Query: 574 agcagagt 581
           || |||||
Sbjct: 506 agtagagt 513
to top
>dbj|AK060055.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-D08, full
           insert sequence
          Length = 1049

 Score =  262 bits (132), Expect = 1e-66
 Identities = 309/368 (83%)
 Strand = Plus / Plus

                                                                       
Query: 214 atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
           |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 156 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 215

                                                                       
Query: 274 gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
           |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 216 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 275

                                                                       
Query: 334 cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
           ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 276 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 335

                                                                       
Query: 394 gaggggatgctcgccaggcttccccccaaatctatcaccgacaaggagctgcataagcgc 453
           ||||   ||||  ||||| |||| ||||| || ||||| ||||||||| |||||||||| 
Sbjct: 336 gaggccttgctgtccaggattcctcccaagtccatcacggacaaggagttgcataagcga 395

                                                                       
Query: 454 cgagacatgctttctaatttgaaatctagagcaaaacagatggcggaaagtttcaacatg 513
           | |||||||||||| ||| |||||||||||||||| ||||||||   |||||||||||||
Sbjct: 396 caagacatgctttcaaatctgaaatctagagcaaagcagatggctacaagtttcaacatg 455

                                                                       
Query: 514 tcaaccttcgccaacagggaggatttgcttggtcagagtaagaaagctgctgatgacatg 573
           |||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 456 tcaaactttgcaaacagggaggatttgcttggtcagagtaagaaagcagctgatgatatg 515

                   
Query: 574 agcagagt 581
           || |||||
Sbjct: 516 agtagagt 523
to top
>ref|XM_481225.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1211

 Score =  137 bits (69), Expect = 5e-29
 Identities = 129/149 (86%)
 Strand = Plus / Plus

                                                                       
Query: 433 gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
           ||||||||| | || ||||||| ||||| |||||| ||||||||||||| | ||||||||
Sbjct: 494 gacaaggagttacacaagcgccaagacacgctttccaatttgaaatctaaaacaaaacag 553

                                                                       
Query: 493 atggcggaaagtttcaacatgtcaaccttcgccaacagggaggatttgcttggtcagagt 552
           |||||   |||||| |||||||||| ||| |||||||||||||| |||||||||||||  
Sbjct: 554 atggcaacaagttttaacatgtcaaactttgccaacagggaggacttgcttggtcagaac 613

                                        
Query: 553 aagaaagctgctgatgacatgagcagagt 581
           ||||| || |||||||| |||||||||||
Sbjct: 614 aagaaggcagctgatgatatgagcagagt 642
to top
>dbj|AK072643.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F24, full
           insert sequence
          Length = 1212

 Score =  137 bits (69), Expect = 5e-29
 Identities = 129/149 (86%)
 Strand = Plus / Plus

                                                                       
Query: 433 gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
           ||||||||| | || ||||||| ||||| |||||| ||||||||||||| | ||||||||
Sbjct: 494 gacaaggagttacacaagcgccaagacacgctttccaatttgaaatctaaaacaaaacag 553

                                                                       
Query: 493 atggcggaaagtttcaacatgtcaaccttcgccaacagggaggatttgcttggtcagagt 552
           |||||   |||||| |||||||||| ||| |||||||||||||| |||||||||||||  
Sbjct: 554 atggcaacaagttttaacatgtcaaactttgccaacagggaggacttgcttggtcagaac 613

                                        
Query: 553 aagaaagctgctgatgacatgagcagagt 581
           ||||| || |||||||| |||||||||||
Sbjct: 614 aagaaggcagctgatgatatgagcagagt 642
to top
>gb|AY110255.1| Zea mays CL3925_1 mRNA sequence
          Length = 993

 Score =  119 bits (60), Expect = 1e-23
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 427 atcaccgacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagca 486
           ||||| ||||||||| ||||||| |||| |||||||||||| | |||||| |||| ||| 
Sbjct: 244 atcactgacaaggagatgcataaacgccaagacatgctttccagtttgaagtctaaagcc 303

                                                                       
Query: 487 aaacagatggcggaaagtttcaacatgtcaaccttcgccaacagggaggatttgcttggt 546
           || |||||||||  ||||||||||||||||| |||| | |||||||||||| ||||||||
Sbjct: 304 aagcagatggcgacaagtttcaacatgtcaaacttcactaacagggaggatctgcttggt 363

                   
Query: 547 cagagtaa 554
           || |||||
Sbjct: 364 caaagtaa 371
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                           
Query: 433     gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
               ||||||||| |||||||||| | |||||||||||| ||| |||||||||||||||| |||
Sbjct: 1023449 gacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcag 1023390

                                                      
Query: 493     atggcggaaagtttcaacatgtcaaccttcgccaacagg 531
               |||||   ||||||||||||||||| ||| || ||||||
Sbjct: 1023389 atggctacaagtttcaacatgtcaaactttgcaaacagg 1023351



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                           
Query: 214     atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
               |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 1024404 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 1024345

                                                                           
Query: 274     gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
               |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 1024344 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 1024285

                                                                           
Query: 334     cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
               ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 1024284 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 1024225

                   
Query: 394     gagg 397
               ||||
Sbjct: 1024224 gagg 1024221



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                    
Query: 529     agggaggatttgcttggtcagagtaagaaagctgctgatgacatgagcagagt 581
               |||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 1023207 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagt 1023155



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 131      gcagccggcgacgcggccgaaccgg 155
                ||||| |||||||||||||||||||
Sbjct: 32984452 gcagcgggcgacgcggccgaaccgg 32984428
to top
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0088N06
          Length = 123454

 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                         
Query: 433   gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
             ||||||||| |||||||||| | |||||||||||| ||| |||||||||||||||| |||
Sbjct: 12157 gacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcag 12098

                                                    
Query: 493   atggcggaaagtttcaacatgtcaaccttcgccaacagg 531
             |||||   ||||||||||||||||| ||| || ||||||
Sbjct: 12097 atggctacaagtttcaacatgtcaaactttgcaaacagg 12059



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                         
Query: 214   atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
             |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 13112 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 13053

                                                                         
Query: 274   gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
             |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 13052 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 12993

                                                                         
Query: 334   cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
             ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 12992 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 12933

                 
Query: 394   gagg 397
             ||||
Sbjct: 12932 gagg 12929



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 529   agggaggatttgcttggtcagagtaagaaagctgctgatgacatgagcagagt 581
             |||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 11915 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagt 11863
to top
>dbj|AP004084.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1217_F02
          Length = 118822

 Score =  101 bits (51), Expect = 3e-18
 Identities = 87/99 (87%)
 Strand = Plus / Minus

                                                                         
Query: 433   gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
             ||||||||| |||||||||| | |||||||||||| ||| |||||||||||||||| |||
Sbjct: 94868 gacaaggagttgcataagcgacaagacatgctttcaaatctgaaatctagagcaaagcag 94809

                                                    
Query: 493   atggcggaaagtttcaacatgtcaaccttcgccaacagg 531
             |||||   ||||||||||||||||| ||| || ||||||
Sbjct: 94808 atggctacaagtttcaacatgtcaaactttgcaaacagg 94770



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 150/184 (81%)
 Strand = Plus / Minus

                                                                         
Query: 214   atggcgtcgtccgcggatccgtgggtgcgggagcacggcgaggcggcgcgcctggccgac 273
             |||||||||||  ||||||| |||||| ||||| || |||||||| |  | || || || 
Sbjct: 95823 atggcgtcgtcttcggatccatgggtgagggagtacagcgaggcgtccaggctcgcggat 95764

                                                                         
Query: 274   gacgtcgcctccatggtcgccgaccgggccgcgctcccgcagtccggcccggaggccatg 333
             |||||| |||||||| |||||||  |||   ||||||||||||| || ||||||  ||||
Sbjct: 95763 gacgtcacctccatgatcgccgataggggttcgctcccgcagtcggggccggagatcatg 95704

                                                                         
Query: 334   cgccacacctccgccatccgccgcaagatcaccatcctcgggaccaggctggacaccctc 393
             ||||||||||| ||||| ||  | ||||| |||||||||||||| ||||| || | ||||
Sbjct: 95703 cgccacacctcggccattcggaggaagataaccatcctcgggactaggctcgatagcctc 95644

                 
Query: 394   gagg 397
             ||||
Sbjct: 95643 gagg 95640



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 529   agggaggatttgcttggtcagagtaagaaagctgctgatgacatgagcagagt 581
             |||||||||||||||||||||||||||||||| |||||||| ||||| |||||
Sbjct: 94626 agggaggatttgcttggtcagagtaagaaagcagctgatgatatgagtagagt 94574
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                            
Query: 433      gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
                ||||||||| | || ||||||| ||||| |||||| ||||||||||||| | ||||||||
Sbjct: 10755764 gacaaggagttacacaagcgccaagacacgctttccaatttgaaatctaaaacaaaacag 10755823

                                                       
Query: 493      atggcggaaagtttcaacatgtcaaccttcgccaacagg 531
                |||||   |||||| |||||||||| ||| |||||||||
Sbjct: 10755824 atggcaacaagttttaacatgtcaaactttgccaacagg 10755862



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 529      agggaggatttgcttggtcagagtaagaaagctgctgatgacatgagcagagt 581
                |||||||| |||||||||||||  ||||| || |||||||| |||||||||||
Sbjct: 10756028 agggaggacttgcttggtcagaacaagaaggcagctgatgatatgagcagagt 10756080
to top
>dbj|AP005415.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0091M20
          Length = 132976

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 85/99 (85%)
 Strand = Plus / Plus

                                                                         
Query: 433   gacaaggagctgcataagcgccgagacatgctttctaatttgaaatctagagcaaaacag 492
             ||||||||| | || ||||||| ||||| |||||| ||||||||||||| | ||||||||
Sbjct: 52896 gacaaggagttacacaagcgccaagacacgctttccaatttgaaatctaaaacaaaacag 52955

                                                    
Query: 493   atggcggaaagtttcaacatgtcaaccttcgccaacagg 531
             |||||   |||||| |||||||||| ||| |||||||||
Sbjct: 52956 atggcaacaagttttaacatgtcaaactttgccaacagg 52994



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 529   agggaggatttgcttggtcagagtaagaaagctgctgatgacatgagcagagt 581
             |||||||| |||||||||||||  ||||| || |||||||| |||||||||||
Sbjct: 53160 agggaggacttgcttggtcagaacaagaaggcagctgatgatatgagcagagt 53212
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 207     gccggcgatggcgtcgtccgcgg 229
               |||||||||||||||||||||||
Sbjct: 1799669 gccggcgatggcgtcgtccgcgg 1799691
to top
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence
          Length = 210614

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 294    cgaccgggccgcgctcccgcag 315
              ||||||||||||||||||||||
Sbjct: 145235 cgaccgggccgcgctcccgcag 145256
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 246    gcacggcgaggcggcgcgcctggccg 271
              |||||||||| |||||||||||||||
Sbjct: 287311 gcacggcgagccggcgcgcctggccg 287286
to top
>ref|XM_468088.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 774

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 131 gcagccggcgacgcggccgaaccgg 155
           ||||| |||||||||||||||||||
Sbjct: 87  gcagcgggcgacgcggccgaaccgg 63
to top
>ref|XM_969869.1| PREDICTED: Tribolium castaneum similar to CG6061-PA (LOC663835), mRNA
          Length = 2088

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 329  ccatgcgccacacctccgcca 349
            |||||||||||||||||||||
Sbjct: 1352 ccatgcgccacacctccgcca 1372
to top
>gb|AC097268.10| Pan troglodytes  BAC RP43-43O8 (Roswell Park Cancer Institute) complete
              sequence
          Length = 241278

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 239    tgcgggagcacggcgaggcgg 259
              |||||||||||||||||||||
Sbjct: 220697 tgcgggagcacggcgaggcgg 220717
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 267     ggccgacgacgtcgcctccatggtc 291
               |||||||||||||||| ||||||||
Sbjct: 1641760 ggccgacgacgtcgccgccatggtc 1641736
to top
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1293_A01
          Length = 139121

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 131   gcagccggcgacgcggccgaaccgg 155
             ||||| |||||||||||||||||||
Sbjct: 30392 gcagcgggcgacgcggccgaaccgg 30368
to top
>gb|AY110761.1| Zea mays CL9510_1 mRNA sequence
          Length = 647

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 243 ggagcacggcgaggcggcgcgcctg 267
           ||||||||||||||||| |||||||
Sbjct: 505 ggagcacggcgaggcggagcgcctg 529
to top
>ref|NM_203144.1| Arabidopsis thaliana unknown protein AT5G42920 transcript variant
            AT5G42920.2 mRNA, complete cds
          Length = 2620

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 486  aaaacagatggcggaaagtt 505
            ||||||||||||||||||||
Sbjct: 2021 aaaacagatggcggaaagtt 2040
to top
>ref|NM_123657.2| Arabidopsis thaliana unknown protein AT5G42920 transcript variant
            AT5G42920.1 mRNA, complete cds
          Length = 2697

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 486  aaaacagatggcggaaagtt 505
            ||||||||||||||||||||
Sbjct: 2098 aaaacagatggcggaaagtt 2117
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 310     ccgcagtccggcccggaggccatg 333
               ||||||||||||||| ||||||||
Sbjct: 2398602 ccgcagtccggcccgcaggccatg 2398579
to top
>gb|DQ214422.1| Taeniopygia guttata clone 0058P0011A02 cytochrome c oxidase subunit
           VIIc-like mRNA, complete sequence
          Length = 390

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 cacctccgccatccgccgca 358
           ||||||||||||||||||||
Sbjct: 89  cacctccgccatccgccgca 108
to top
>gb|DQ214421.1| Taeniopygia guttata clone 0058P0004A06 cytochrome c oxidase subunit
           VIIc-like mRNA, complete sequence
          Length = 375

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 cacctccgccatccgccgca 358
           ||||||||||||||||||||
Sbjct: 81  cacctccgccatccgccgca 100
to top
>gb|DQ214420.1| Taeniopygia guttata clone 0058P0057H03 cytochrome c oxidase subunit
           VIIc-like mRNA, complete sequence
          Length = 383

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 cacctccgccatccgccgca 358
           ||||||||||||||||||||
Sbjct: 89  cacctccgccatccgccgca 108
to top
>gb|DQ214419.1| Taeniopygia guttata clone 0058P0038D08 cytochrome c oxidase subunit
           VIIc-like mRNA, complete sequence
          Length = 399

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 cacctccgccatccgccgca 358
           ||||||||||||||||||||
Sbjct: 105 cacctccgccatccgccgca 124
to top
>gb|BC058353.1| Mus musculus cell cycle related kinase, mRNA (cDNA clone
           IMAGE:5721113), partial cds
          Length = 4037

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 cgcgctcccgcagtccggcc 322
           ||||||||||||||||||||
Sbjct: 266 cgcgctcccgcagtccggcc 247
to top
>gb|AE007271.1| Sinorhizobium meliloti 1021 plasmid pSymA section 77 of 121 of the
             complete plasmid sequence
          Length = 13038

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   cgacgacgtcgcctccatggtcgc 293
             ||||||||||| ||||||||||||
Sbjct: 10758 cgacgacgtcggctccatggtcgc 10735
to top
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 203     ccctgccggcgatggcgtcgtccg 226
               |||| |||||||||||||||||||
Sbjct: 5368276 ccctcccggcgatggcgtcgtccg 5368253
to top
>gb|AC131649.2| Homo sapiens chromosome 16 clone RP11-609N14, complete sequence
          Length = 182518

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 477    atctagagcaaaacagatgg 496
              ||||||||||||||||||||
Sbjct: 139080 atctagagcaaaacagatgg 139061
to top
>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds;
             transport protein, helix-turn-helix regulator (pkeRI),
             P450 monooxygenase (pkePI), P450 monooxygenase (pkePII),
             P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I
             PKS (pkeAII), and type I PKS (pkeAIII) genes, complete
             cds; pkeAIV gene, complete sequence; type I PKS,
             monooxygenases, transporter, ketoacyl-ACP synthase
             (typeII), acyl carrier protien, amino transferase, and
             DNA-binding protein genes, complete cds; and unknown genes
          Length = 68451

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   gtcgccgaccgggccgcgct 308
             ||||||||||||||||||||
Sbjct: 16477 gtcgccgaccgggccgcgct 16496
to top
>gb|AY091346.1| Arabidopsis thaliana unknown protein (At5g42920) mRNA, complete cds
          Length = 2140

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 486  aaaacagatggcggaaagtt 505
            ||||||||||||||||||||
Sbjct: 1669 aaaacagatggcggaaagtt 1688
to top
>gb|AY039925.1| Arabidopsis thaliana unknown protein (At5g42920) mRNA, complete cds
          Length = 2712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 486  aaaacagatggcggaaagtt 505
            ||||||||||||||||||||
Sbjct: 2098 aaaacagatggcggaaagtt 2117
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    cgaggcggcgcgcctggccgacga 275
              ||||||||||||||||| ||||||
Sbjct: 221330 cgaggcggcgcgcctgggcgacga 221353
to top
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 252    cgaggcggcgcgcctggccgacga 275
              ||||||||||||||||| ||||||
Sbjct: 342000 cgaggcggcgcgcctgggcgacga 342023
to top
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 252    cgaggcggcgcgcctggccgacga 275
              ||||||||||||||||| ||||||
Sbjct: 256473 cgaggcggcgcgcctgggcgacga 256450
to top
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    tcgccgaccgggccgcgctc 309
              ||||||||||||||||||||
Sbjct: 152989 tcgccgaccgggccgcgctc 153008
to top
>emb|AJ009971.2|SFR9971 Streptomyces fradiae orf, tlrB and tylN genes, partial
          Length = 2830

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 285  catggtcgccgaccgggccgcgct 308
            ||||||||||| ||||||||||||
Sbjct: 1957 catggtcgccgcccgggccgcgct 1980
to top
>dbj|AB219524.1| Pseudomonas aeruginosa MexPQ-OpmE operon (mexP, mexQ, opmE), complete
            cds
          Length = 5922

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  gcgaggcggcgcgcctggcc 270
            ||||||||||||||||||||
Sbjct: 5554 gcgaggcggcgcgcctggcc 5573
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 252    cgaggcggcgcgcctggccg 271
              ||||||||||||||||||||
Sbjct: 993754 cgaggcggcgcgcctggccg 993773
to top
>gb|AC161421.3| Mus musculus BAC clone RP24-424A8 from chromosome 9, complete sequence
          Length = 167449

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 557   aagctgctgatgacatgagc 576
             ||||||||||||||||||||
Sbjct: 11128 aagctgctgatgacatgagc 11147
to top
>dbj|AK078262.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430548D23 product:CDK-related
           protein kinase PNQLARE, full insert sequence
          Length = 2076

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 cgcgctcccgcagtccggcc 322
           ||||||||||||||||||||
Sbjct: 436 cgcgctcccgcagtccggcc 417
to top
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    gagcacggcgaggcggcgcg 263
              ||||||||||||||||||||
Sbjct: 390204 gagcacggcgaggcggcgcg 390223
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     gcgatggcgtcgtccgcgga 230
               ||||||||||||||||||||
Sbjct: 1563793 gcgatggcgtcgtccgcgga 1563812
to top
>dbj|AK044470.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
           clone:A930014M05 product:CDK-related protein kinase
           PNQLARE, full insert sequence
          Length = 2031

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 cgcgctcccgcagtccggcc 322
           ||||||||||||||||||||
Sbjct: 490 cgcgctcccgcagtccggcc 471
to top
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    gcttccccccaaatctatca 430
              ||||||||||||||||||||
Sbjct: 366439 gcttccccccaaatctatca 366458
to top
>gb|AC154741.3| Mus musculus BAC clone RP24-392C9 from chromosome 9, complete sequence
          Length = 178684

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   aagctgctgatgacatgagc 576
             ||||||||||||||||||||
Sbjct: 72194 aagctgctgatgacatgagc 72175
to top
>gb|AC027277.5| Homo sapiens chromosome 16 clone RP11-27M24, complete sequence
          Length = 163735

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 477    atctagagcaaaacagatgg 496
              ||||||||||||||||||||
Sbjct: 132195 atctagagcaaaacagatgg 132214
to top
>gb|AE004772.1| Pseudomonas aeruginosa PAO1, section 333 of 529 of the complete
            genome
          Length = 13569

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 251  gcgaggcggcgcgcctggcc 270
            ||||||||||||||||||||
Sbjct: 7820 gcgaggcggcgcgcctggcc 7801
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 290     tcgccgaccgggccgcgctc 309
               ||||||||||||||||||||
Sbjct: 1317520 tcgccgaccgggccgcgctc 1317501
to top
>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 486   aaaacagatggcggaaagtt 505
             ||||||||||||||||||||
Sbjct: 35844 aaaacagatggcggaaagtt 35825
to top
>dbj|AK057952.1| Homo sapiens cDNA FLJ25223 fis, clone STM00880
          Length = 2680

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 477 atctagagcaaaacagatgg 496
           ||||||||||||||||||||
Sbjct: 183 atctagagcaaaacagatgg 164
to top
>ref|NM_210091.1| Eremothecium gossypii AEL124Wp (AEL124W), mRNA
          Length = 2823

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 gagcacggcgaggcggcgcg 263
           ||||||||||||||||||||
Sbjct: 118 gagcacggcgaggcggcgcg 137
to top
>gb|AF055922.1|AF055922 Streptomyces fradiae dipeptidil carboxypeptidase (ddcA), tylosin
            resistance protein (tlrB), glycosyltransferase (tylN),
            methyltransferase (tylE), 4-ketoreductase (tylD),
            ferredoxin (tylH2), cytochrome P450 (tylH1), macrocin
            O-methyltransferase (tylF), epimerase (tylJ), acyl-CoA
            oxydase (tylP), and butyrolactone receptor (tylQ) genes,
            complete cds
          Length = 12905

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 285  catggtcgccgaccgggccgcgct 308
            ||||||||||| ||||||||||||
Sbjct: 1955 catggtcgccgcccgggccgcgct 1978
to top
>emb|CT025616.13| Mouse DNA sequence from clone RP23-451G17 on chromosome 13, complete
             sequence
          Length = 144243

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   cgcgctcccgcagtccggcc 322
             ||||||||||||||||||||
Sbjct: 25382 cgcgctcccgcagtccggcc 25363
to top
>dbj|AB085583.1| Pseudomonas aeruginosa opmE gene for putative outer membrane efflux
            protein, complete cds
          Length = 1476

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 251  gcgaggcggcgcgcctggcc 270
            ||||||||||||||||||||
Sbjct: 1220 gcgaggcggcgcgcctggcc 1239
to top
>emb|AL954135.7| Mouse DNA sequence from clone RP23-231H10 on chromosome 4, complete
             sequence
          Length = 100102

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    aggggaaaggaggcatccat 105
             ||||||||||||||||||||
Sbjct: 45503 aggggaaaggaggcatccat 45522
to top
>gb|AC155292.2| Mus musculus BAC clone RP24-440O21 from chromosome 13, complete sequence
          Length = 184951

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    cgcgctcccgcagtccggcc 322
              ||||||||||||||||||||
Sbjct: 182056 cgcgctcccgcagtccggcc 182075
to top
>gb|M20568.1|AVINIFC A.vinelandii major nif gene cluster encoding nitrogen fixation complex,
             complete cds
          Length = 28795

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ggcgcgcctggccgacgacg 277
             ||||||||||||||||||||
Sbjct: 19326 ggcgcgcctggccgacgacg 19345
to top
>gb|M17349.1|AVINIFUSV A.vinelandii nitrogen fixation genes U, S, and V complete cds
          Length = 3661

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  ggcgcgcctggccgacgacg 277
            ||||||||||||||||||||
Sbjct: 1626 ggcgcgcctggccgacgacg 1645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,161,804
Number of Sequences: 3902068
Number of extensions: 4161804
Number of successful extensions: 80928
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79530
Number of HSP's gapped (non-prelim): 1391
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top