ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23e01 |
|---|---|
| Clone Library Name | barley_pub |
>HAT7_ARATH (Q00466) Homeobox-leucine zipper protein HAT7 (HD-ZIP protein 7)| (HD-ZIP protein ATHB-3) Length = 314 Score = 107 bits (266), Expect = 3e-23 Identities = 49/66 (74%), Positives = 59/66 (89%) Frame = +1 Query: 241 LGGKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 LG KK+RL LEQVRALE+SFE NKL+PERK ++A+ LGL PRQ+A+WFQNRRARWKTKQ Sbjct: 112 LGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQ 171 Query: 421 LERDFN 438 LERD++ Sbjct: 172 LERDYD 177
>ATHB5_ARATH (P46667) Homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein| ATHB-5) Length = 312 Score = 107 bits (266), Expect = 3e-23 Identities = 47/62 (75%), Positives = 58/62 (93%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KKRRL +EQV+ALE++FE DNKL+PERK ++A++LGL PRQVA+WFQNRRARWKTKQLER Sbjct: 72 KKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLER 131 Query: 430 DF 435 D+ Sbjct: 132 DY 133
>ATHB6_ARATH (P46668) Homeobox-leucine zipper protein ATHB-6 (Homeodomain| transcription factor ATHB-6) (HD-ZIP protein ATHB-6) Length = 311 Score = 106 bits (265), Expect = 3e-23 Identities = 47/66 (71%), Positives = 60/66 (90%) Frame = +1 Query: 238 GLGGKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 GL KKRRL++ QV+ALE++FE +NKL+PERK ++A++LGL PRQVAVWFQNRRARWKTK Sbjct: 58 GLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTK 117 Query: 418 QLERDF 435 QLE+D+ Sbjct: 118 QLEKDY 123
>HAT5_ARATH (Q02283) Homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)| (HD-ZIP protein ATHB-1) Length = 272 Score = 103 bits (256), Expect = 4e-22 Identities = 47/63 (74%), Positives = 55/63 (87%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KKRRL EQV LE+SFE +NKL+PERK ++A+ LGL PRQVAVWFQNRRARWKTKQLER Sbjct: 68 KKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 127 Query: 430 DFN 438 D++ Sbjct: 128 DYD 130
>ATHB7_ARATH (P46897) Homeobox-leucine zipper protein ATHB-7 (Homeodomain| transcription factor ATHB-7) (HD-ZIP protein ATHB-7) Length = 258 Score = 86.7 bits (213), Expect = 4e-17 Identities = 35/62 (56%), Positives = 53/62 (85%) Frame = +1 Query: 253 KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 +RR + EQ+++LE FE++ +L+P +K ++AR+LGL PRQVA+WFQN+RARWK+KQLE + Sbjct: 33 QRRFSDEQIKSLEMMFESETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLETE 92 Query: 433 FN 438 +N Sbjct: 93 YN 94
>HAT9_ARATH (P46603) Homeobox-leucine zipper protein HAT9 (Homeodomain-leucine| zipper protein HAT9) (Homeodomain transcription factor HAT9) (HD-ZIP protein 9) Length = 274 Score = 65.9 bits (159), Expect = 7e-11 Identities = 34/61 (55%), Positives = 41/61 (67%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL +Q LE SF+ + L+P++K +AR L L PRQV VWFQNRRAR K KQ E Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEV 172 Query: 430 D 432 D Sbjct: 173 D 173
>HAT14_ARATH (P46665) Homeobox-leucine zipper protein HAT14 (HD-ZIP protein 14)| Length = 336 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/61 (54%), Positives = 42/61 (68%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL+ +Q LE SF+ + L+P++K +A+ L L PRQV VWFQNRRAR K KQ E Sbjct: 190 KKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEV 249 Query: 430 D 432 D Sbjct: 250 D 250
>HAT22_ARATH (P46604) Homeobox-leucine zipper protein HAT22 (HD-ZIP protein 22)| Length = 278 Score = 65.1 bits (157), Expect = 1e-10 Identities = 33/61 (54%), Positives = 41/61 (67%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL +Q LE +F+ + L+P++K +AR L L PRQV VWFQNRRAR K KQ E Sbjct: 126 KKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEV 185 Query: 430 D 432 D Sbjct: 186 D 186
>HAT1_ARATH (P46600) Homeobox-leucine zipper protein HAT1 (HD-ZIP protein 1)| Length = 282 Score = 64.7 bits (156), Expect = 1e-10 Identities = 33/61 (54%), Positives = 42/61 (68%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL+ +Q LE +F+ N L+P++K +A+ LGL RQV VWFQNRRAR K KQ E Sbjct: 135 KKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEV 194 Query: 430 D 432 D Sbjct: 195 D 195
>HAT3_ARATH (P46602) Homeobox-leucine zipper protein HAT3 (HD-ZIP protein 3)| Length = 315 Score = 64.7 bits (156), Expect = 1e-10 Identities = 37/83 (44%), Positives = 46/83 (55%), Gaps = 16/83 (19%) Frame = +1 Query: 232 SCGLGG----------------KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLH 363 SC LGG KK RL+ EQ LE +F+ + L+P++K +A+ L L Sbjct: 140 SCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLR 199 Query: 364 PRQVAVWFQNRRARWKTKQLERD 432 RQV VWFQNRRAR K KQ E D Sbjct: 200 TRQVEVWFQNRRARTKLKQTEVD 222
>HAT4_ARATH (Q05466) Homeobox-leucine zipper protein HAT4 (HD-ZIP protein 4)| (HD-ZIP protein ATHB-2) Length = 284 Score = 63.9 bits (154), Expect = 3e-10 Identities = 32/61 (52%), Positives = 42/61 (68%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL+ +Q LE +F+ + L+P++K +A+ LGL RQV VWFQNRRAR K KQ E Sbjct: 129 KKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEV 188 Query: 430 D 432 D Sbjct: 189 D 189
>ATHB4_ARATH (P92953) Homeobox-leucine zipper protein ATHB-4 (HD-ZIP protein| ATHB-4) Length = 318 Score = 62.8 bits (151), Expect = 6e-10 Identities = 31/61 (50%), Positives = 41/61 (67%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL+ +Q LE +F+ + L+P++K +A+ L L RQV VWFQNRRAR K KQ E Sbjct: 163 KKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEV 222 Query: 430 D 432 D Sbjct: 223 D 223
>HAT2_ARATH (P46601) Homeobox-leucine zipper protein HAT2 (HD-ZIP protein 2)| Length = 283 Score = 62.4 bits (150), Expect = 7e-10 Identities = 32/61 (52%), Positives = 41/61 (67%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 KK RL+ +Q LE +F+ N L+P++K +A+ L L RQV VWFQNRRAR K KQ E Sbjct: 130 KKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEV 189 Query: 430 D 432 D Sbjct: 190 D 190
>HHEX_CHICK (Q05502) Homeobox protein PRH (Hematopoietically expressed| homeobox) Length = 277 Score = 53.1 bits (126), Expect = 4e-07 Identities = 26/60 (43%), Positives = 35/60 (58%) Frame = +1 Query: 247 GKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 G + R + EQ LE+ FE L P + R+A+ L L RQV WFQNRRA+W+ + E Sbjct: 146 GGQVRFSNEQTIELEKKFETQKYLSPPERKRLAKLLQLSERQVKTWFQNRRAKWRRLKQE 205
>HHEX_HUMAN (Q03014) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 270 Score = 52.4 bits (124), Expect = 8e-07 Identities = 25/60 (41%), Positives = 35/60 (58%) Frame = +1 Query: 247 GKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 G + R + +Q LE+ FE L P + R+A+ L L RQV WFQNRRA+W+ + E Sbjct: 139 GGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 198
>HHEX_MOUSE (P43120) Homeobox protein PRH (Hematopoietically expressed| homeobox) (Homeobox protein HEX) Length = 271 Score = 52.4 bits (124), Expect = 8e-07 Identities = 25/60 (41%), Positives = 35/60 (58%) Frame = +1 Query: 247 GKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 G + R + +Q LE+ FE L P + R+A+ L L RQV WFQNRRA+W+ + E Sbjct: 140 GGQVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQE 199
>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1| Length = 364 Score = 51.2 bits (121), Expect = 2e-06 Identities = 23/49 (46%), Positives = 32/49 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 +Q+ ALE++FE L +AR+A LG+ QV VWFQNRR +W+ K Sbjct: 246 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 51.2 bits (121), Expect = 2e-06 Identities = 23/49 (46%), Positives = 32/49 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 +Q+ ALE++FE L +AR+A LG+ QV VWFQNRR +W+ K Sbjct: 246 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 294
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 51.2 bits (121), Expect = 2e-06 Identities = 23/49 (46%), Positives = 32/49 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 +Q+ ALE++FE L +AR+A LG+ QV VWFQNRR +W+ K Sbjct: 247 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 295
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 51.2 bits (121), Expect = 2e-06 Identities = 23/49 (46%), Positives = 32/49 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 +Q+ ALE++FE L +AR+A LG+ QV VWFQNRR +W+ K Sbjct: 247 QQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKK 295
>NKX31_HUMAN (Q99801) Homeobox protein Nkx-3.1| Length = 234 Score = 50.4 bits (119), Expect = 3e-06 Identities = 42/132 (31%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Frame = +1 Query: 49 GDRSRMKRQIKR-PAGSKESPEPGEKLAFAEKENLLAAYMDHXXXXXXXXXXXXXXXXXR 225 G RSR Q + G + +PE E LA E E L +Y+ R Sbjct: 64 GGRSRAGAQNDQLSTGPRAAPEEAETLAETEPERHLGSYL--------LDSENTSGALPR 115 Query: 226 AMSCGLGGKKRRLAL---EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNR 396 +KR A QV LER F L +A +A++L L QV +WFQNR Sbjct: 116 LPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNR 175 Query: 397 RARWKTKQLERD 432 R + K KQL + Sbjct: 176 RYKTKRKQLSSE 187
>MEOX2_HUMAN (P50222) Homeobox protein MOX-2 (Mesenchyme homeobox 2) (Growth| arrest-specific homeobox) Length = 304 Score = 50.1 bits (118), Expect = 4e-06 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A EQ+R LE F N L R+ IA +L L RQV VWFQNRR +WK Sbjct: 188 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 243
>MEOX2_RAT (P39020) Homeobox protein MOX-2 (Growth arrest-specific homeobox)| Length = 303 Score = 50.1 bits (118), Expect = 4e-06 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A EQ+R LE F N L R+ IA +L L RQV VWFQNRR +WK Sbjct: 187 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>MEOX2_MOUSE (P32443) Homeobox protein MOX-2 (Mesenchyme homeobox 2)| Length = 303 Score = 50.1 bits (118), Expect = 4e-06 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A EQ+R LE F N L R+ IA +L L RQV VWFQNRR +WK Sbjct: 187 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 242
>MEOX2_XENLA (P39021) Homeobox protein MOX-2| Length = 298 Score = 50.1 bits (118), Expect = 4e-06 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A EQ+R LE F N L R+ IA +L L RQV VWFQNRR +WK Sbjct: 182 RKERTAFTKEQIRELEAEFAHHNYLTRLRRYEIAVNLDLTERQVKVWFQNRRMKWK 237
>MEOX1_HUMAN (P50221) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 254 Score = 49.7 bits (117), Expect = 5e-06 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A EQ+R LE F N L R+ IA +L L RQV VWFQNRR +WK Sbjct: 172 RKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 227
>MEOX1_MOUSE (P32442) Homeobox protein MOX-1 (Mesenchyme homeobox 1)| Length = 253 Score = 49.7 bits (117), Expect = 5e-06 Identities = 28/56 (50%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A EQ+R LE F N L R+ IA +L L RQV VWFQNRR +WK Sbjct: 171 RKERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQVKVWFQNRRMKWK 226
>YD73_SCHPO (Q10328) Putative homeobox protein C32A11.03c in chromosome I| Length = 942 Score = 48.9 bits (115), Expect = 8e-06 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 KK+RL +Q+ L R F D P + +I R+L + R V +WFQNRRA+ K Sbjct: 169 KKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQNRRAKSK 222
>HD10_ENCCU (Q8SW18) Homeobox protein HD-10 (EcHD-10)| Length = 227 Score = 48.9 bits (115), Expect = 8e-06 Identities = 21/53 (39%), Positives = 33/53 (62%) Frame = +1 Query: 253 KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 ++R Q++ LE +FE + + D + ++ LG+ PR V VWFQNRRA+ K Sbjct: 34 RKRTTKAQLKVLEETFETNIRPDANMRKKLGEQLGMTPRSVQVWFQNRRAKIK 86
>HXD5_HETFR (Q9IA11) Homeobox protein Hox-D5| Length = 252 Score = 48.9 bits (115), Expect = 8e-06 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GL GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 174 GLEGKRTRTAYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 233 Query: 412 TKQLERDFN 438 + N Sbjct: 234 KDNKLKSIN 242
>GBX1_HUMAN (Q14549) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) (Fragment) Length = 139 Score = 48.5 bits (114), Expect = 1e-05 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GGK RR EQ+ LE+ F L +++IA L L QV +WFQNRRA+WK Sbjct: 34 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 93
>GBX1_MOUSE (P82976) Homeobox protein GBX-1 (Gastrulation and brain-specific| homeobox protein 1) Length = 418 Score = 48.5 bits (114), Expect = 1e-05 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GGK RR EQ+ LE+ F L +++IA L L QV +WFQNRRA+WK Sbjct: 313 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 372
>HXDBA_BRARE (Q90470) Homeobox protein Hox-D11a (Hox-D11) (Hox-C11)| Length = 263 Score = 48.1 bits (113), Expect = 1e-05 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Frame = +1 Query: 85 PAGSKESPE---PGEKLAFAEKENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGGKK 255 P SK+ P+ PG+ ++ D + S +K Sbjct: 134 PEQSKQKPDTSVPGDAACNPSTDSAEQTKQDPTDTVEEESSVSTCDEEKNSXSSATKSRK 193 Query: 256 RRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 +R Q+R LER F + ++ E++ +++R L L RQV +WFQNR R K K+L R Sbjct: 194 KRCPYSKYQIRELEREFFFNVYINKEKRLQLSRMLSLTDRQVKIWFQNR--RMKEKKLNR 251 Query: 430 D 432 D Sbjct: 252 D 252
>SMOX5_SCHMA (Q26604) Homeobox protein SMOX-5| Length = 284 Score = 48.1 bits (113), Expect = 1e-05 Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 2/55 (3%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK--TKQLERD 432 Q+ LE +F L P + RIA+ LGL QV WFQNRRA+ K ++LERD Sbjct: 48 QLNELENNFNRQRYLTPTDRDRIAKHLGLTNTQVITWFQNRRAKLKREAEELERD 102
>NKX31_MOUSE (P97436) Homeobox protein Nkx-3.1| Length = 237 Score = 47.8 bits (112), Expect = 2e-05 Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = +1 Query: 250 KKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQL 423 K+ R A QV LER F L +A +A++L L QV +WFQNRR + K KQL Sbjct: 126 KRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLKLTETQVKIWFQNRRYKTKRKQL 185 Query: 424 ERD 432 D Sbjct: 186 SED 188
>DFD_DROME (P07548) Homeotic protein deformed| Length = 586 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+ K++R A Q+ LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 363 GMEPKRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 422
>HXB4_CHICK (P14840) Homeobox protein Hox-B4 (Chox-Z)| Length = 245 Score = 47.8 bits (112), Expect = 2e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 147 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHSLCLSERQIKIWFQNRRMKWK 206
>HXC5_XENLA (P09020) Homeobox protein Hox-C5 (XlHbox-5) (Fragment)| Length = 87 Score = 47.8 bits (112), Expect = 2e-05 Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Frame = +1 Query: 229 MSCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 MS GK+ R + Q LE+ F + L R+ IA +L L+ RQ+ +WFQNRR Sbjct: 14 MSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRM 73 Query: 403 RWK--TKQLERD 432 +WK TK +D Sbjct: 74 KWKKDTKVKSKD 85
>HMB3_TRIGR (P10178) Homeobox protein HB3 (Fragment)| Length = 108 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/47 (42%), Positives = 28/47 (59%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +Q LE+ F + R+ IA+ LGL RQ+ +WFQNRR +WK Sbjct: 37 QQTLELEKEFHFSRYVTRRRRFEIAQSLGLSERQIKIWFQNRRMKWK 83
>HXA4_CHICK (P17277) Homeobox protein Hox-A4 (Chox-1.4)| Length = 309 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQV +WFQNRR +WK Sbjct: 206 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 265
>HXA4_MOUSE (P06798) Homeobox protein Hox-A4 (Hox-1.4) (MH-3)| Length = 285 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQV +WFQNRR +WK Sbjct: 177 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 236
>HXC4_MOUSE (Q08624) Homeobox protein Hox-C4 (Hox-3.5)| Length = 264 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 153 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>HXC4_HUMAN (P09017) Homeobox protein Hox-C4 (Hox-3E) (CP19)| Length = 264 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 153 GGEPKRSRAAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 212
>HXC4A_BRARE (Q9PWM3) Homeobox protein Hox-C4a (Hox-C4)| Length = 268 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G K+ R A +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 151 GAEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWK 210
>HXB4_FUGRU (O13074) Homeobox protein Hox-B4 (HOXB-4)| Length = 251 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 160 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 219
>HXD11_HETFR (Q9IA15) Homeobox protein Hox-D11| Length = 265 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 2/71 (2%) Frame = +1 Query: 226 AMSCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRR 399 ++S L +K+R Q+R LER F + ++ E++ +++R L L RQV +WFQNR Sbjct: 186 SLSTALRCRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR- 244 Query: 400 ARWKTKQLERD 432 R K K+L RD Sbjct: 245 -RMKEKKLSRD 254
>HXA4_HUMAN (Q00056) Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4)| Length = 320 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQV +WFQNRR +WK Sbjct: 212 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 271
>HXB4_XENLA (P09070) Homeobox protein Hox-B4 (Xhox-1A)| Length = 232 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/47 (44%), Positives = 28/47 (59%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 151 QQVLELEKEFHYNRYLTRRRRVEIAHTLRLSERQIKIWFQNRRMKWK 197
>HME60_APIME (P09075) Homeobox protein E60 (Fragment)| Length = 109 Score = 47.4 bits (111), Expect = 2e-05 Identities = 20/47 (42%), Positives = 32/47 (68%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L+R F + L R+ +++RDLGL+ Q+ +WFQN+RA+ K Sbjct: 30 EQLARLKREFAENRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAKIK 76
>HM09_CAEEL (P56407) Homeobox protein ceh-9| Length = 147 Score = 47.4 bits (111), Expect = 2e-05 Identities = 21/54 (38%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 +QV LE+ FEA L ++ +A+ L + QV +WFQNRR +WK + E++ Sbjct: 80 KQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKKIESEKE 133
>HXB4A_BRARE (P22574) Homeobox protein Hox-B4a (Hox-B4) (Zf-13)| Length = 246 Score = 47.4 bits (111), Expect = 2e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 148 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWK 207
>HXC5_MOUSE (P32043) Homeobox protein Hox-C5 (Hox-3.4) (Hox-6.2)| Length = 222 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +1 Query: 229 MSCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 MS GK+ R + Q LE+ F + L R+ IA +L L+ RQ+ +WFQNRR Sbjct: 149 MSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRM 208 Query: 403 RWK 411 +WK Sbjct: 209 KWK 211
>HXC5_HUMAN (Q00444) Homeobox protein Hox-C5 (Hox-3D) (CP11)| Length = 222 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +1 Query: 229 MSCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 MS GK+ R + Q LE+ F + L R+ IA +L L+ RQ+ +WFQNRR Sbjct: 149 MSHETDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRM 208 Query: 403 RWK 411 +WK Sbjct: 209 KWK 211
>HXA4_HETFR (Q9IA22) Homeobox protein Hox-A4| Length = 247 Score = 47.4 bits (111), Expect = 2e-05 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQV +WFQNRR +WK Sbjct: 146 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWK 205
>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)| Length = 251 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 159 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 218
>HXC5A_BRARE (P09074) Homeobox protein Hox-C5a (Hox-C5) (Hox-3.4) (Zf-25)| Length = 232 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +1 Query: 229 MSCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 MS GK+ R + Q LE+ F + L R+ IA +L L+ RQ+ +WFQNRR Sbjct: 159 MSHESDGKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRM 218 Query: 403 RWK 411 +WK Sbjct: 219 KWK 221
>HXB5_XENLA (P09019) Homeobox protein Hox-B5 (XlHbox-4) (Xhox-1B) (Fragment)| Length = 230 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 152 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 211
>HXC4_ORYLA (Q9PVS4) Homeobox protein Hox-C4| Length = 261 Score = 47.0 bits (110), Expect = 3e-05 Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G K+ R A +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 151 GTEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWK 210
>GBX2_HUMAN (P52951) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 348 Score = 47.0 bits (110), Expect = 3e-05 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 3/112 (2%) Frame = +1 Query: 85 PAGSKESPEPGEKLAFAEKENLL--AAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGGKKR 258 P G +ES + ++ +NL AA+ + S G ++R Sbjct: 192 PKGKEESFSLESDVDYSSDDNLTGQAAHKEEDPGHALEETPPSSGAAGSTTSTGKNRRRR 251 Query: 259 R-LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ LE+ F L +++IA L L QV +WFQNRRA+WK Sbjct: 252 TAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>HMEN_ARTSF (Q05640) Homeobox protein engrailed| Length = 349 Score = 47.0 bits (110), Expect = 3e-05 Identities = 20/47 (42%), Positives = 29/47 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L+ F + L R+ +AR+LGLH Q+ +WFQN RA+ K Sbjct: 259 EQLSRLKHEFNENRYLTERRRQDLARELGLHENQIKIWFQNNRAKLK 305
>HXD4_MOUSE (P10628) Homeobox protein Hox-D4 (Hox-4.2) (Hox-5.1)| Length = 250 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 149 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208
>HXC4_RAT (P18865) Homeobox protein Hox-C4 (R3) (Fragment)| Length = 76 Score = 47.0 bits (110), Expect = 3e-05 Identities = 21/47 (44%), Positives = 28/47 (59%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 21 QQVLELEKEFHYNRYLTRRRRIEIAHSLCLSERQIKIWFQNRRMKWK 67
>HXB4_MOUSE (P10284) Homeobox protein Hox-B4 (Hox-2.6)| Length = 250 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 158 GGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKWK 217
>HXD4_HUMAN (P09016) Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13)| Length = 255 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 151 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 210
>HXD4_CHICK (P17278) Homeobox protein Hox-D4 (Chox-A)| Length = 235 Score = 47.0 bits (110), Expect = 3e-05 Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 4/60 (6%) Frame = +1 Query: 244 GGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG+ +R +QV LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 141 GGEPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 200
>HXD11_HUMAN (P31277) Homeobox protein Hox-D11 (Hox-4F)| Length = 338 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F + ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 277 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 327
>HXB5A_BRARE (P09014) Homeobox protein Hox-B5a (Hox-B5) (Zf-21)| Length = 275 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 197 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 256
>HXC11_HUMAN (O43248) Homeobox protein Hox-C11| Length = 304 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F + ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 243 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLSRD 293
>HXA5_MORSA (Q9PWD3) Homeobox protein Hox-A5| Length = 281 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 202 GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 261 Query: 412 TKQLERDFN 438 + N Sbjct: 262 KDNKLKSMN 270
>HXA5A_BRARE (Q9YGT6) Homeobox protein Hox-A5a| Length = 227 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 149 GPEGKRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWK 208 Query: 412 TKQLERDFN 438 + N Sbjct: 209 KDNKLKSMN 217
>HM05_CAEEL (P20269) Homeobox protein ceh-5| Length = 148 Score = 46.6 bits (109), Expect = 4e-05 Identities = 22/47 (46%), Positives = 27/47 (57%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ LE SF L +A++A LGL QV VWFQNRR + K Sbjct: 45 EQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTKQK 91
>HXD11_CHICK (P24342) Homeobox protein Hox-D11 (Chox-4.6) (GHOX-4.6) (Chox-4E)| Length = 280 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F + ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 219 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 269
>HXB5_MOUSE (P09079) Homeobox protein Hox-B5 (Hox-2.1) (MU-1) (H24.1)| Length = 269 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 191 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 250
>HXB5_HUMAN (P09067) Homeobox protein Hox-B5 (Hox-2A) (HHO.C10) (HU-1)| Length = 269 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 191 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 250
>HXD11_MOUSE (P23813) Homeobox protein Hox-D11 (Hox-4.6) (Hox-5.5)| Length = 323 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F + ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 262 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 312
>HM7X_CHICK (P15142) Homeobox protein CHOX-7 (Fragment)| Length = 124 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +1 Query: 238 GLGGKKRR---LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARW 408 G G +RR EQ+ LE+ F L +++IA L L QV +WFQNRRA+W Sbjct: 20 GAGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKW 79 Query: 409 K 411 K Sbjct: 80 K 80
>GBX2_CHICK (O42230) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) Length = 340 Score = 46.6 bits (109), Expect = 4e-05 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = +1 Query: 226 AMSCGLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQN 393 A + GK RR EQ+ LE+ F L +++IA L L QV +WFQN Sbjct: 230 AANAAATGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQN 289 Query: 394 RRARWK 411 RRA+WK Sbjct: 290 RRAKWK 295
>HXB5B_BRARE (P09013) Homeobox protein Hox-B5b (Hox-B5-like) (Zf-54)| Length = 276 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 198 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 257
>HXC5_NOTVI (P31262) Homeobox protein Hox-C5 (NvHbox-3.4) (Fragment)| Length = 71 Score = 46.6 bits (109), Expect = 4e-05 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GK+ R + Q LE+ F + L R+ IA +L L+ RQ+ +WFQNRR +WK Sbjct: 4 GKRSRTSYTRYQTLELEKEFHFNRYLTRRRRIEIANNLCLNERQIKIWFQNRRMKWK 60
>HXB5_CHICK (P14838) Homeobox protein Hox-B5 (Ghox-2.1) (Fragment)| Length = 82 Score = 46.6 bits (109), Expect = 4e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 4 GPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 63
>HXA4_LINSA (P81192) Homeobox protein Hox-A4 (LsHox 4) (Fragment)| Length = 80 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G K+ R A Q+ LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 8 GSESKRSRTAYTRHQILELEKEFHFNRYLTRRRRIEIAHALDLSERQIKIWFQNRRMKWK 67
>HXD11_NOTVI (P31263) Homeobox protein Hox-D11 (NvHox-2)| Length = 277 Score = 46.6 bits (109), Expect = 4e-05 Identities = 24/53 (45%), Positives = 35/53 (66%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F + ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 216 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 266
>HXABB_DANAE (Q9DDU2) Homeobox protein Hox-A11b| Length = 283 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/53 (45%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 222 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 272
>HXABB_BRARE (Q9DDU1) Homeobox protein Hox-A11b (Hox-A11)| Length = 283 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/53 (45%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 222 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKLNRD 272
>HXA5_MOUSE (P09021) Homeobox protein Hox-A5 (Hox-1.3) (M2)| Length = 270 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 192 GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 251
>HXA5_HUMAN (P20719) Homeobox protein Hox-A5 (Hox-1C)| Length = 270 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 192 GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 251
>HXA5_CHICK (Q6B3N0) Homeobox protein Hox-A5| Length = 270 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 192 GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 251
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 5/72 (6%) Frame = +1 Query: 238 GLGGKKRRLA-----LEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 G GG K R A EQ+ +LE F+ L + +A L L QV +WFQNRR Sbjct: 539 GGGGSKPRRARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRT 598 Query: 403 RWKTKQLERDFN 438 +WK + D N Sbjct: 599 KWKKQNPGMDVN 610
>HXA5_AMBME (P50208) Homeobox protein Hox-A5 (Fragment)| Length = 148 Score = 46.2 bits (108), Expect = 5e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 70 GPRGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 129
>HGL2_ARATH (P46607) Homeobox protein GLABRA2 (Homeobox-leucine zipper protein| ATHB-10) (HD-ZIP protein ATHB-10) Length = 745 Score = 46.2 bits (108), Expect = 5e-05 Identities = 22/57 (38%), Positives = 34/57 (59%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 K R +Q+R +E F+ D +++ ++++ LGL PRQV WFQNRR + K Q Sbjct: 102 KYHRHTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQ 158
>HME30_APIME (P09076) Homeobox protein E30 (Fragment)| Length = 109 Score = 46.2 bits (108), Expect = 5e-05 Identities = 20/47 (42%), Positives = 31/47 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L+R F + L R+ +++RDLGL Q+ +WFQN+RA+ K Sbjct: 30 EQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKRAKIK 76
>GBX2_MOUSE (P48031) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (Homeobox protein STRA7) Length = 348 Score = 46.2 bits (108), Expect = 5e-05 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 ++RR A EQ+ LE+ F L +++IA L L QV +WFQNRRA+WK Sbjct: 248 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWK 303
>HXA11_MOUSE (P31311) Homeobox protein Hox-A11 (Hox-1.9)| Length = 313 Score = 46.2 bits (108), Expect = 5e-05 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%) Frame = +1 Query: 238 GLGGKKRR-----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 G GG++ R Q+R LER F ++ E++ +++R L L RQV +WFQNR Sbjct: 235 GSGGQRTRKKRCPYTKYQIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR-- 292 Query: 403 RWKTKQLERD 432 R K K++ RD Sbjct: 293 RMKEKKINRD 302
>MATA1_PICAN (Q707Y6) Mating-type protein A1 (MATa1 transcription factor)| Length = 181 Score = 45.8 bits (107), Expect = 7e-05 Identities = 21/56 (37%), Positives = 34/56 (60%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 K+R + LE++F+ + + + RIAR+ G+ P QV VWF N+RAR K++ Sbjct: 125 KRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARSKSR 180
>HXA5_HETFR (Q9IA23) Homeobox protein Hox-A5| Length = 275 Score = 45.8 bits (107), Expect = 7e-05 Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 197 GPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 256
>HME1A_BRARE (Q04896) Homeobox protein engrailed-1a (Eng1)| Length = 231 Score = 45.8 bits (107), Expect = 7e-05 Identities = 18/47 (38%), Positives = 32/47 (68%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + +R+ +AR+LGL+ Q+ +WFQN+RA+ K Sbjct: 153 EQLQRLKAEFQTSRYITEQRRQALARELGLNESQIKIWFQNKRAKIK 199
>BARH1_RAT (P63156) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 45.8 bits (107), Expect = 7e-05 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 10/118 (8%) Frame = +1 Query: 88 AGSKESPEPGEKLAFAEKENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGG------ 249 +G +PEPG +LA E+ R +S Sbjct: 117 SGQPAAPEPGGRLAAKAGEDFRDKLDKSVSSASSDSEYKVKEEGDREISSSRDSPPVRLK 176 Query: 250 --KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A Q+ LERSFE L + + +A L L QV W+QNRR +WK Sbjct: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234
>BARH1_MOUSE (P63157) BarH-like 1 homeobox protein (Bar-class homeodomain| protein MBH2) (BarH-related homeobox protein 1) Length = 327 Score = 45.8 bits (107), Expect = 7e-05 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 10/118 (8%) Frame = +1 Query: 88 AGSKESPEPGEKLAFAEKENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGG------ 249 +G +PEPG +LA E+ R +S Sbjct: 117 SGQPAAPEPGGRLAAKAGEDFRDKLDKSVSSASSDSEYKVKEEGDREISSSRDSPPVRLK 176 Query: 250 --KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A Q+ LERSFE L + + +A L L QV W+QNRR +WK Sbjct: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234
>BARH1_HUMAN (Q9BZE3) BarH-like 1 homeobox protein| Length = 327 Score = 45.8 bits (107), Expect = 7e-05 Identities = 33/118 (27%), Positives = 45/118 (38%), Gaps = 10/118 (8%) Frame = +1 Query: 88 AGSKESPEPGEKLAFAEKENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGG------ 249 +G +PEPG +LA E+ R +S Sbjct: 117 SGQPAAPEPGGRLAAKAAEDFRDKLDKSGSNASSDSEYKVKEEGDREISSSRDSPPVRLK 176 Query: 250 --KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A Q+ LERSFE L + + +A L L QV W+QNRR +WK Sbjct: 177 KPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWK 234
>Y749_MIMIV (Q5UP03) Putative homeobox protein R749| Length = 224 Score = 45.8 bits (107), Expect = 7e-05 Identities = 23/61 (37%), Positives = 37/61 (60%) Frame = +1 Query: 250 KKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 K+ RL+ E+ LE + +N PE + +A+ +G PRQV +WFQN+R + K LE+ Sbjct: 164 KRVRLSDEERNILESQYSKNNFPSPEIRDELAKKIGKTPRQVQIWFQNKRCK-DRKNLEK 222 Query: 430 D 432 + Sbjct: 223 N 223
>GBX2_XENLA (Q91907) Homeobox protein GBX-2 (Gastrulation and brain-specific| homeobox protein 2) (XGBX-2) Length = 340 Score = 45.8 bits (107), Expect = 7e-05 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 ++RR A EQ+ LE+ F L +++IA L L QV +WFQNRRA+WK Sbjct: 240 RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHVLKLSEVQVKIWFQNRRAKWK 295
>BAGP_DROME (P22809) Homeobox protein bagpipe (NK-3)| Length = 382 Score = 45.8 bits (107), Expect = 7e-05 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Frame = +1 Query: 238 GLGGKKRRLAL---EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARW 408 GL KKR A QV LER F L ++ +A+ L L QV +WFQNRR + Sbjct: 171 GLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKT 230 Query: 409 KTKQLER 429 K KQ+++ Sbjct: 231 KRKQIQQ 237
>DBX1_MOUSE (P52950) Homeobox protein DBX1| Length = 335 Score = 45.4 bits (106), Expect = 9e-05 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%) Frame = +1 Query: 247 GKKRRLALEQV--RALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 G RR V +ALE++F+ + + ++A LGL QV +WFQNRR +W+ + Sbjct: 181 GMLRRAVFSDVQRKALEKTFQKQKYISKPDRKKLASKLGLKDSQVKIWFQNRRMKWRNSK 240
>HXABA_BRARE (Q9DDU0) Homeobox protein Hox-A11a| Length = 284 Score = 45.4 bits (106), Expect = 9e-05 Identities = 24/53 (45%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F ++ E++ +++R L L RQV +WFQNR R K K+L RD Sbjct: 223 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKMWFQNR--RMKEKKLNRD 273
>PAX6_XENLA (P55864) Paired box protein Pax-6| Length = 422 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 273
>PAX6_RAT (P63016) Paired box protein Pax-6 (Oculorhombin)| Length = 422 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 273
>PAX6_MOUSE (P63015) Paired box protein Pax-6 (Oculorhombin)| Length = 422 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 273
>PAX6_HUMAN (P26367) Paired box protein Pax-6 (Oculorhombin) (Aniridia type II| protein) Length = 422 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 273
>HXB1_MOUSE (P17919) Homeobox protein Hox-B1 (Hox-2.9)| Length = 297 Score = 45.4 bits (106), Expect = 9e-05 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +1 Query: 244 GGKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQL 423 GG + Q+ LE+ F + L R+ IA L L+ QV +WFQNRR + K ++ Sbjct: 200 GGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 259 Query: 424 E 426 E Sbjct: 260 E 260
>HXA11_CHICK (P31258) Homeobox protein Hox-A11 (Ghox-1I) (Chox-1.9)| Length = 297 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/53 (43%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F ++ E++ +++R L L RQV +WFQNR R K K++ RD Sbjct: 236 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKINRD 286
>HME2B_XENLA (P52730) Homeobox protein engrailed-2-B (En-2B) (EN2 MABEN)| Length = 265 Score = 45.4 bits (106), Expect = 9e-05 Identities = 18/47 (38%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + L +R+ +A++LGL+ Q+ +WFQN+RA+ K Sbjct: 186 EQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAKIK 232
>HME2A_BRARE (P09015) Homeobox protein engrailed-2a (Zf-En-2) (Eng2)| Length = 265 Score = 45.4 bits (106), Expect = 9e-05 Identities = 18/47 (38%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + L +R+ +A++LGL+ Q+ +WFQN+RA+ K Sbjct: 186 EQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAKIK 232
>HXC6B_BRARE (Q9PWM5) Homeobox protein Hox-C6b| Length = 227 Score = 45.4 bits (106), Expect = 9e-05 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 G G +RR + Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 130 GYGSDRRRGRQIYSRYQTLELEKEFHYNRYLTRRRRIEIANTLCLSERQIKIWFQNRRMK 189 Query: 406 WK 411 WK Sbjct: 190 WK 191
>HME2_CHICK (Q05917) Homeobox protein engrailed-2 (Gg-En-2)| Length = 288 Score = 45.4 bits (106), Expect = 9e-05 Identities = 18/47 (38%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + L +R+ +A++LGL+ Q+ +WFQN+RA+ K Sbjct: 209 EQLQRLKAEFQTNRYLTEQRRQSLAQELGLNESQIKIWFQNKRAKIK 255
>PAX6_CHICK (P47237) Paired box protein Pax-6 (Fragment)| Length = 216 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 20 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 73
>HXA2_RAT (P31246) Homeobox protein Hox-A2 (Hox-1.11)| Length = 372 Score = 45.4 bits (106), Expect = 9e-05 Identities = 39/117 (33%), Positives = 47/117 (40%), Gaps = 8/117 (6%) Frame = +1 Query: 85 PAGSKESPEPGEKLAFAE----KENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGGK 252 PAGS+ SP P L E KE A ++ G GG Sbjct: 79 PAGSRGSPVPARALQPPEYPWMKEKKAAKKTALPPAAASTGPACLGHKESLEIADGSGGG 138 Query: 253 KRRLALE----QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 RRL Q+ LE+ F + L R+ IA L L RQV VWFQNRR + K Sbjct: 139 SRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 195
>PAX6_COTJA (P47238) Paired box protein Pax-6 (Pax-QNR)| Length = 416 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 220 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 273
>HXA2_HUMAN (O43364) Homeobox protein Hox-A2| Length = 376 Score = 45.4 bits (106), Expect = 9e-05 Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 5/114 (4%) Frame = +1 Query: 85 PAGSKESPE-PGEKLAFAEKENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGGKKRR 261 PAG+ + PE P K A K+ L ++ G GG RR Sbjct: 86 PAGALQPPEYPWMKEKKAAKKTALLPAAAAAATAAATGPACLSHKESLEIADGSGGGSRR 145 Query: 262 LALE----QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 L Q+ LE+ F + L R+ IA L L RQV VWFQNRR + K Sbjct: 146 LRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 199
>HXD4A_BRARE (O57374) Homeobox protein Hox-D4a (Hox-D4)| Length = 236 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +QV LE+ F + L R+ A L L RQ+ +WFQNRR +WK Sbjct: 156 QQVLELEKEFHFNRYLTRRRRIESAHTLSLSERQIKIWFQNRRMKWK 202
>HXA11_HUMAN (P31270) Homeobox protein Hox-A11 (Hox-1I)| Length = 313 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/53 (43%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+R LER F ++ E++ +++R L L RQV +WFQNR R K K++ RD Sbjct: 252 QIRELEREFFFSVYINKEKRLQLSRMLNLTDRQVKIWFQNR--RMKEKKINRD 302
>BARH1_DROME (Q24255) Homeobox protein B-H1 (Homeobox protein BarH1)| Length = 544 Score = 45.4 bits (106), Expect = 9e-05 Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRRLAL----EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 GL K+R+ Q++ LE+SFE L + + +A L L QV W+QNRR + Sbjct: 294 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTK 353 Query: 406 WK 411 WK Sbjct: 354 WK 355
>PAX6_ORYLA (O73917) Paired box protein Pax-6| Length = 437 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 239 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 292
>PAX6_BRARE (P26630) Paired box protein Pax[Zf-a] (Pax-6)| Length = 437 Score = 45.4 bits (106), Expect = 9e-05 Identities = 20/54 (37%), Positives = 33/54 (61%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 EQ+ ALE+ FE + D + R+A + L ++ VWF NRRA+W+ ++ R+ Sbjct: 239 EQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRN 292
>HXB8_PIG (P09078) Homeobox protein Hox-B8 (Hox-2.4) (Fragment)| Length = 93 Score = 45.4 bits (106), Expect = 9e-05 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 Q LE+ F+ + L +R ++ LGL RQ+ +WFQNRR +WK ++ Sbjct: 18 QTLELEKEFQCNPYLTCKRWIEVSHALGLTERQIKIWFQNRRMKWKKRE 66
>HMENA_MYXGL (P31535) Homeobox protein engrailed-like A (EN-A) (Fragment)| Length = 60 Score = 45.4 bits (106), Expect = 9e-05 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +Q+ L F+A+ L ER+ +AR+L L+ Q+ +WFQN+RA+ K Sbjct: 2 DQLARLRAEFQANRYLTEERRQNLARELSLNEAQIKIWFQNKRAKIK 48
>HXA4A_BRARE (Q9PWL5) Homeobox protein Hox-A4a (Zf-26) (Hoxx4)| Length = 244 Score = 45.1 bits (105), Expect = 1e-04 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +Q LE+ F + L R+ IA + L RQV +WFQNRR +WK Sbjct: 157 QQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWK 203
>EMX1_HUMAN (Q04741) Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty| spiracles-like protein 1) Length = 257 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/53 (39%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+ LER+FE ++ + + ++A L L QV VWFQNRR ++K ++LE + Sbjct: 170 QLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEE 222
>HXB8A_BRARE (Q8AWZ0) Homeobox protein Hox-B8a (Hox-B8)| Length = 245 Score = 45.1 bits (105), Expect = 1e-04 Identities = 23/71 (32%), Positives = 37/71 (52%) Frame = +1 Query: 223 RAMSCGLGGKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRA 402 R + G ++ + Q LE+ F + L +R+ ++ LGL RQV +WFQNRR Sbjct: 139 RPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRM 198 Query: 403 RWKTKQLERDF 435 +WK + + F Sbjct: 199 KWKKENNKDKF 209
>HXB7A_BRARE (Q8AWY9) Homeobox protein Hox-B7a (Hox-B7)| Length = 227 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/53 (39%), Positives = 28/53 (52%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK + D Sbjct: 156 QTLELEKEFHFNRYLSRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENKSTD 208
>HOXE_CHICK (Q91975) Homeobox protein CHOX-E (CHOX E) (Fragment)| Length = 157 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/50 (36%), Positives = 31/50 (62%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 +Q +ALE+ F+ + + ++A +LGL QV +WFQNRR +W+ + Sbjct: 19 DQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNRRMKWRNSK 68
>HXA4_MORSA (Q9PWD2) Homeobox protein Hox-A4| Length = 248 Score = 45.1 bits (105), Expect = 1e-04 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +Q LE+ F + L R+ IA + L RQV +WFQNRR +WK Sbjct: 159 QQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVKIWFQNRRMKWK 205
>HME2B_BRARE (P31533) Homeobox protein engrailed-2b (Zf-En-1) (Eng3)| Length = 261 Score = 45.1 bits (105), Expect = 1e-04 Identities = 18/47 (38%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + L +R+ +A++LGL+ Q+ +WFQN+RA+ K Sbjct: 182 EQLQRLKNEFQNNRYLTEQRRQALAQELGLNESQIKIWFQNKRAKIK 228
>HM1_CHICK (P13544) Homeobox protein CHOX-1 (Fragment)| Length = 67 Score = 45.1 bits (105), Expect = 1e-04 Identities = 22/52 (42%), Positives = 29/52 (55%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLER 429 Q+ LE+ F L R+ +AR L L QV VWFQNRR + K ++ ER Sbjct: 12 QLTELEKEFHFSRYLSRARRLEVARSLRLRDAQVKVWFQNRRMKQKKRERER 63
>EMX1_MOUSE (Q04742) Homeobox protein EMX1 (Empty spiracles homolog 1) (Empty| spiracles-like protein 1) (Fragment) Length = 66 Score = 45.1 bits (105), Expect = 1e-04 Identities = 21/53 (39%), Positives = 34/53 (64%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+ LER+FE ++ + + ++A L L QV VWFQNRR ++K ++LE + Sbjct: 12 QLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEE 64
>HXD8_CHICK (P23459) Homeobox protein Hox-D8 (Chox-M)| Length = 188 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDF 435 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK + + F Sbjct: 106 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF 159
>HOX1_HALRO (P28468) Homeobox protein AHox1| Length = 741 Score = 44.7 bits (104), Expect = 2e-04 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%) Frame = +1 Query: 250 KKRR------LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 KKRR +L Q R LE+SF++ + + ++A L L QV +WFQNRR +W+ Sbjct: 642 KKRRKWNRAVFSLMQRRGLEKSFQSQKYVAKPERRKLADALSLTDAQVKIWFQNRRMKWR 701
>HXC6_SHEEP (P49925) Homeobox protein Hox-C6| Length = 153 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 G G +RR + Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 54 GYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMK 113 Query: 406 WK 411 WK Sbjct: 114 WK 115
>HXA5_RAT (P52949) Homeobox protein Hox-A5 (Hox-1.3) (Fragment)| Length = 233 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 171 GPEGKRARTCYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 230
>HXC6_MOUSE (P10629) Homeobox protein Hox-C6 (Hox-3.3) (Hox-6.1)| Length = 235 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 G G +RR + Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 136 GYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMK 195 Query: 406 WK 411 WK Sbjct: 196 WK 197
>HXC6_HUMAN (P09630) Homeobox protein Hox-C6 (Hox-3C) (HHO.C8) (CP25)| Length = 235 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 G G +RR + Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 136 GYGADRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMK 195 Query: 406 WK 411 WK Sbjct: 196 WK 197
>HXB8_MOUSE (P09632) Homeobox protein Hox-B8 (Hox-2.4)| Length = 243 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDF 435 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK + + F Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF 210
>HXB8_HUMAN (P17481) Homeobox protein Hox-B8 (Hox-2D) (Hox-2.4)| Length = 243 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDF 435 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK + + F Sbjct: 157 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF 210
>HXC6A_BRARE (P15862) Homeobox protein Hox-C6a (Hox-C6) (Zf-61)| Length = 231 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 G G +RR + Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 137 GYGSDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMK 196 Query: 406 WK 411 WK Sbjct: 197 WK 198
>HM01_CAEEL (P53547) Homeobox protein ceh-1 (Fragment)| Length = 132 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/56 (39%), Positives = 29/56 (51%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFN 438 EQ+ ALE F+ L + +A L L QV +WFQNRR +WK +D N Sbjct: 11 EQLVALENKFKTSRYLSVVERLNLAIQLQLSETQVKIWFQNRRTKWKKHNPGQDAN 66
>OTP_MOUSE (O09113) Homeobox protein orthopedia| Length = 325 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/56 (39%), Positives = 32/56 (57%) Frame = +1 Query: 253 KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 + R Q+ LERSF + D + +A +GL +V VWFQNRRA+WK ++ Sbjct: 108 RTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRK 163
>PAX6_DROME (O18381) Paired box protein Pax-6 (Protein eyeless)| Length = 857 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/54 (35%), Positives = 34/54 (62%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 +Q+ +LE+ FE + D + R+A +GL ++ VWF NRRA+W+ ++ R+ Sbjct: 440 DQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRREEKLRN 493
>HXA7_XENLA (P09071) Homeobox protein Hox-A7 (XlHbox-3) (Xhox-36)| Length = 209 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK + E Sbjct: 133 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 183
>HXA2_MOUSE (P31245) Homeobox protein Hox-A2 (Hox-1.11) (Hox1.11)| Length = 372 Score = 44.7 bits (104), Expect = 2e-04 Identities = 39/117 (33%), Positives = 47/117 (40%), Gaps = 8/117 (6%) Frame = +1 Query: 85 PAGSKESPEPGEKLAFAE----KENLLAAYMDHXXXXXXXXXXXXXXXXXRAMSCGLGGK 252 PAGS+ SP P L E KE A ++ G GG Sbjct: 79 PAGSRGSPVPAGALQPPEYPWMKEKKAAKKTALPPAAASTGPACLGHKESLEIADGSGGG 138 Query: 253 KRRLALE----QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 RRL Q+ LE+ F + L R+ IA L L RQV VWFQNRR + K Sbjct: 139 SRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHK 195
>HXA7_CHICK (Q90VZ9) Homeobox protein Hox-A7| Length = 219 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK + E Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 190
>HXB8_RAT (P18863) Homeobox protein Hox-B8 (R1A) (Fragment)| Length = 92 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDF 435 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK + + F Sbjct: 22 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF 75
>HXA7_SHEEP (Q28600) Homeobox protein Hox-A7 (Fragment)| Length = 71 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/51 (41%), Positives = 28/51 (54%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK + E Sbjct: 15 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKE 65
>HXA4_SHEEP (Q28598) Homeobox protein Hox-A4 (Fragment)| Length = 87 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +QV LE+ F + L R+ IA L L QV +WFQNRR +WK Sbjct: 5 QQVLELEKEFHFNRYLTRRRRIEIAHTLCLSEAQVKIWFQNRRMKWK 51
>HMEN_SCHAM (P14150) Segmentation polarity homeobox protein engrailed (G-EN)| (Fragment) Length = 93 Score = 44.7 bits (104), Expect = 2e-04 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L+ F + L R+ +AR+LGL+ Q+ +WFQN+RA+ K Sbjct: 44 EQLARLKHEFTENRYLTERRRQELARELGLNEAQIKIWFQNKRAKIK 90
>HMEN_LAMPL (P31534) Homeobox protein engrailed-like (EN) (Fragment)| Length = 60 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/47 (42%), Positives = 30/47 (63%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L F+A L ER+ +AR+L L+ Q+ +WFQN+RA+ K Sbjct: 2 EQLCRLRAEFQASRYLTEERRTALARELRLNEAQIKIWFQNKRAKIK 48
>HXD8_HETFR (Q9IA12) Homeobox protein Hox-D8| Length = 240 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/54 (38%), Positives = 31/54 (57%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDF 435 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK + + F Sbjct: 158 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKF 211
>HXDDA_BRARE (Q90472) Homeobox protein Hox-D13a (Hox-D13)| Length = 256 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 G+K+R+ Q++ LER + + E + RIA L RQV +WFQNRR + K + Sbjct: 191 GRKKRVPYTKFQLKELEREYNTTKFITKENRRRIASSTNLSERQVTIWFQNRRVKDKKR 249
>HXA1A_BRARE (Q98SI1) Homeobox protein Hox-A1a (Hox-A1)| Length = 329 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%) Frame = +1 Query: 223 RAMSCGLGGK----KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQ 390 +A G GG+ + + +Q+ LE+ F + L R+ IA L L+ QV +WFQ Sbjct: 215 KAGEYGFGGQPNTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQ 274 Query: 391 NRRARWKTKQLE 426 NRR + K ++ E Sbjct: 275 NRRMKQKKREKE 286
>HXB13_HUMAN (Q92826) Homeobox protein Hox-B13| Length = 284 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q+R LER + A+ + +++ +I+ L RQ+ +WFQNRR + K Sbjct: 216 GRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEK 272
>CDX4_HUMAN (O14627) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 284 Score = 44.3 bits (103), Expect = 2e-04 Identities = 19/40 (47%), Positives = 28/40 (70%) Frame = +1 Query: 286 LERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 LE+ F + + +RK+ +A +LGL RQV +WFQNRRA+ Sbjct: 188 LEKEFHCNRYITIQRKSELAVNLGLSERQVKIWFQNRRAK 227
>HM13_CAEEL (P17488) Homeobox protein ceh-13| Length = 202 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = +1 Query: 244 GGKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQL 423 G + Q+ LE+ F ++ R+ IA +L L QV +WFQNRR + K ++ Sbjct: 115 GTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKREK 174 Query: 424 ERDF 435 E+ F Sbjct: 175 EKAF 178
>OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP)| Length = 364 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/56 (39%), Positives = 32/56 (57%) Frame = +1 Query: 253 KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 + R Q+ LER+F + D + IA +GL +V VWFQNRRA+WK ++ Sbjct: 120 RTRFTPAQLNELERNFAKTHYPDIFMREEIAMRVGLTESRVQVWFQNRRAKWKKRK 175
>ESX1L_HUMAN (Q8N693) Extraembryonic, spermatogenesis, homeobox 1-like protein| Length = 406 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +1 Query: 250 KKRRLALEQ--VRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 ++RR A Q ++ LE F+ D + R+A L L +V VWFQNRRA+WK Q Sbjct: 140 RRRRTAFTQFQLQELENFFDESQYPDVVARERLAARLNLTEDRVQVWFQNRRAKWKRNQ 198
>LIN39_CAEEL (P34684) Homeobox protein lin-39 (Abnormal cell lineage protein 39)| Length = 253 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = +1 Query: 244 GGKKRRLAL--EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTK 417 G K++R A QV LE+ F L +R+ +A L L RQV +WFQNRR + K + Sbjct: 164 GEKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQVKIWFQNRRMKHKKE 223 Query: 418 QLER 429 ++ Sbjct: 224 NKDK 227
>HXC8_MOUSE (P09025) Homeobox protein Hox-C8 (Hox-3.1) (M31)| Length = 242 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 205
>HXC8_HUMAN (P31273) Homeobox protein Hox-C8 (Hox-3A)| Length = 242 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 205
>HXC8_CHICK (Q9YH13) Homeobox protein Hox-C8 (cHoxc-8)| Length = 242 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK Sbjct: 160 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 205
>HXB13_MOUSE (P70321) Homeobox protein Hox-B13| Length = 286 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q+R LER + A+ + +++ +I+ L RQ+ +WFQNRR + K Sbjct: 218 GRKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEK 274
>HOX3_BRAFL (P50901) Homeobox protein HOX3| Length = 411 Score = 44.3 bits (103), Expect = 2e-04 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R A Q+ LE+ F + L R+ +A L L RQ+ +WFQNRR ++K Sbjct: 132 GAAGKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMAAMLNLTERQIKIWFQNRRMKYK 191 Query: 412 TKQ 420 +Q Sbjct: 192 KEQ 194
>HXBAA_BRARE (Q9PWL7) Homeobox protein Hox-B10a (Hox-B10) (Fragment)| Length = 85 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = +1 Query: 229 MSCGLGGKKR-RLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 +S G KKR + Q+ LE+ F + L ER+ I+R + L RQV +WFQNRR + Sbjct: 7 LSAKAGRKKRCPYSKHQILELEKEFLFNMYLTRERRLEISRSINLTDRQVKIWFQNRRMK 66 Query: 406 WK 411 K Sbjct: 67 LK 68
>HXB6_CHICK (P14839) Homeobox protein Hox-B6 (GHOX-2.2) (Fragment)| Length = 84 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 18 QTLELEKEFHFNRYLTRRRRIEIAHSLCLTERQIKIWFQNRRMKWK 63
>HXC8_RAT (P18866) Homeobox protein Hox-C8 (R4) (Fragment)| Length = 108 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 28/46 (60%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L +R+ ++ LGL RQV +WFQNRR +WK Sbjct: 26 QTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 71
>HXA7_MORSA (Q9PWD4) Homeobox protein Hox-A7| Length = 225 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/51 (41%), Positives = 27/51 (52%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLE 426 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK E Sbjct: 137 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDHKE 187
>OTP_DROME (P56672) Homeobox protein orthopedia| Length = 264 Score = 44.3 bits (103), Expect = 2e-04 Identities = 22/56 (39%), Positives = 31/56 (55%) Frame = +1 Query: 253 KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 + R Q+ LER F + D + IA +GL +V VWFQNRRA+WK ++ Sbjct: 10 RTRFTPAQLNELERCFSKTHYPDIFMREEIAMRIGLTESRVQVWFQNRRAKWKKRK 65
>HXC13_MOUSE (P50207) Homeobox protein Hox-C13| Length = 328 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q++ LE+ + A + E++ RI+ L RQV +WFQNRR + K Sbjct: 258 GRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEK 314
>HXB7_MOUSE (P09024) Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (MH-22B)| Length = 217 Score = 43.9 bits (102), Expect = 3e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 193
>HXB7_HUMAN (P09629) Homeobox protein Hox-B7 (Hox-2C) (HHO.C1)| Length = 217 Score = 43.9 bits (102), Expect = 3e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 193
>BARH2_DROME (Q24256) Homeobox protein B-H2 (Homeobox protein BarH2)| Length = 645 Score = 43.9 bits (102), Expect = 3e-04 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%) Frame = +1 Query: 229 MSCGLGGKKRRLAL----EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNR 396 +S L K+R+ Q++ LE+SFE L + + +A L L QV W+QNR Sbjct: 372 LSLSLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNR 431 Query: 397 RARWK 411 R +WK Sbjct: 432 RTKWK 436
>SCR_DROME (P09077) Homeotic protein Sex combs reduced| Length = 417 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFN 438 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK + N Sbjct: 335 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMN 389
>HXC6_XENLA (P02832) Homeobox protein Hox-C6 (XlHbox-1) (AC1) [Contains:| Homeobox protein Hox-C6 PRII; Homeobox protein Hox-C6 PRI] Length = 234 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = +1 Query: 238 GLGGKKRR----LALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 G G +RR + Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 136 GYGTDRRRGRQIYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMK 195 Query: 406 WK 411 WK Sbjct: 196 WK 197
>HXB7B_XENLA (P04476) Homeobox protein Hox-B7 B (XlHbox-2 B) (P52)| Length = 220 Score = 43.9 bits (102), Expect = 3e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 149 QTLELEKEFHFNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWK 194
>HM19_CAEEL (P26797) Homeobox protein ceh-19| Length = 199 Score = 43.9 bits (102), Expect = 3e-04 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = +1 Query: 253 KRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQL 423 ++ + Q+ LE F+ D L ++ ++++ L L Q+ WFQNRR +WK KQL Sbjct: 98 RQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIKTWFQNRRTKWK-KQL 153
>HME1_HUMAN (Q05925) Homeobox protein engrailed-1 (Hu-En-1)| Length = 392 Score = 43.9 bits (102), Expect = 3e-04 Identities = 17/47 (36%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+A+ + +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 313 EQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIK 359
>UNC4_CAEEL (P29506) Homeobox protein unc-4 (Homeobox protein ceh-4)| (Uncoordinated protein 4) Length = 252 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/53 (39%), Positives = 32/53 (60%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+ LE +FEA + D + +A L L +V VWFQNRRA+W+ ++ R+ Sbjct: 99 QLEELESAFEASHYPDVFMREALAMRLDLLESRVQVWFQNRRAKWRKREQNRN 151
>HXC13_HUMAN (P31276) Homeobox protein Hox-C13 (Hox-3G)| Length = 330 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q++ LE+ + A + E++ RI+ L RQV +WFQNRR + K Sbjct: 260 GRKKRVPYTKVQLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEK 316
>HME1_MOUSE (P09065) Homeobox protein engrailed-1 (Mo-En-1)| Length = 401 Score = 43.9 bits (102), Expect = 3e-04 Identities = 17/47 (36%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+A+ + +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 322 EQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIK 368
>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)| Length = 232 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/47 (44%), Positives = 26/47 (55%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ ALE F A L + +A L L QV +WFQNRR +WK Sbjct: 75 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 121
>HME1B_XENLA (P31538) Homeobox protein engrailed-1-B (En-1B) (Fragment)| Length = 171 Score = 43.9 bits (102), Expect = 3e-04 Identities = 17/47 (36%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+A+ + +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 92 EQLQRLKAEFQANRYITEQRRQTLAQELSLNESQIKIWFQNKRAKIK 138
>SMOX2_SCHMA (Q26601) Homeobox protein engrailed-like SMOX-2| Length = 524 Score = 43.9 bits (102), Expect = 3e-04 Identities = 19/46 (41%), Positives = 30/46 (65%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q++ L + FE + LD R+ ++A +L L QV +WFQN+RA+ K Sbjct: 434 QLKRLSQEFEKNRYLDELRRKKLATELDLRESQVKIWFQNKRAKTK 479
>HXB6_MOUSE (P09023) Homeobox protein Hox-B6 (Hox-2.2) (MH-22A)| Length = 224 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = +1 Query: 232 SCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 S G G++ R Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 141 SFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 200 Query: 406 WK 411 WK Sbjct: 201 WK 202
>HXB6_HUMAN (P17509) Homeobox protein Hox-B6 (Hox-2B) (Hox-2.2) (HU-2)| Length = 224 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Frame = +1 Query: 232 SCGLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 S G G++ R Q LE+ F + L R+ IA L L RQ+ +WFQNRR + Sbjct: 141 SFGPSGRRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 200 Query: 406 WK 411 WK Sbjct: 201 WK 202
>HMEN_DROME (P02836) Segmentation polarity homeobox protein engrailed| Length = 552 Score = 43.9 bits (102), Expect = 3e-04 Identities = 18/47 (38%), Positives = 31/47 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L+R F + L R+ +++ +LGL+ Q+ +WFQN+RA+ K Sbjct: 464 EQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIK 510
>HXCDB_BRARE (Q6JIY4) Homeobox protein Hox-C13b| Length = 273 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q++ LE+ + A + +R+ RI+ L RQV +WFQNRR + K Sbjct: 201 GRKKRVPYTKIQLKELEKEYAASKFITKDRRRRISATTSLSERQVTIWFQNRRVKEK 257
>HXB1_HUMAN (P14653) Homeobox protein Hox-B1 (Hox-2I)| Length = 301 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +1 Query: 238 GLG---GKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARW 408 GLG G + Q+ LE+ F + L R+ IA L L+ QV +WFQNRR + Sbjct: 199 GLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQ 258 Query: 409 KTKQLE 426 K ++ E Sbjct: 259 KKRERE 264
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 43.9 bits (102), Expect = 3e-04 Identities = 18/47 (38%), Positives = 31/47 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ L+R F + L R+ +++ +LGL+ Q+ +WFQN+RA+ K Sbjct: 496 EQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIK 542
>SCR_APIME (P15859) Homeobox protein H55 (Fragment)| Length = 86 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFN 438 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK + N Sbjct: 19 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMN 73
>HXA5_SHEEP (Q28599) Homeobox protein Hox-A5 (Fragment)| Length = 49 Score = 43.9 bits (102), Expect = 3e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 1 QTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK 46
>HME1A_XENLA (P31537) Homeobox protein engrailed-1-A (En-1A) (Fragment)| Length = 60 Score = 43.9 bits (102), Expect = 3e-04 Identities = 17/47 (36%), Positives = 33/47 (70%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+A+ + +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 2 EQLQRLKAEFQANRYITEQRRQSLAQELSLNESQIKIWFQNKRAKIK 48
>HMA2_HELTR (P17138) Homeobox protein HTR-A2 (Fragment)| Length = 60 Score = 43.9 bits (102), Expect = 3e-04 Identities = 18/46 (39%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q+ LE+ F D + R+ +A L L R + +WFQNRR +WK Sbjct: 12 QLFELEKEFHFDKYISRPRRVELASSLNLTERHIKIWFQNRRMKWK 57
>NKX12_MOUSE (P42580) NK1 transcription factor-related protein 2 (Homeobox| protein SAX-1) (NKX-1.1) Length = 305 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/47 (44%), Positives = 26/47 (55%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ+ ALE F A L + +A L L QV +WFQNRR +WK Sbjct: 166 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK 212
>HM30_CAEEL (Q22909) Homeobox protein ceh-30| Length = 299 Score = 43.9 bits (102), Expect = 3e-04 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%) Frame = +1 Query: 232 SCGLGGKKRRLALE-QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARW 408 SC K R + + Q++ LE +FE L + + +A +GL QV W+QNRR +W Sbjct: 153 SCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKW 212 Query: 409 K 411 K Sbjct: 213 K 213
>HMX_STRPU (Q26656) Homeobox protein Hmx (SpHmx) (H6-like) (Fragment)| Length = 405 Score = 43.9 bits (102), Expect = 3e-04 Identities = 21/46 (45%), Positives = 27/46 (58%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 QV LE +FE L +A +A +L L QV +WFQNRR +WK Sbjct: 264 QVFQLESTFEVKRYLSSSERAGLAANLHLTETQVKIWFQNRRNKWK 309
>HXA7_MOUSE (P02830) Homeobox protein Hox-A7 (Hox-1.1) (M6-12) (M6)| Length = 229 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 140 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 185
>HXA6_HETFR (Q9IA24) Homeobox protein Hox-A6| Length = 229 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 162 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 207
>HXA7_HETFR (Q9IA25) Homeobox protein Hox-A7| Length = 208 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 146 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 191
>HXA6_CHICK (Q5YLH5) Homeobox protein Hox-A6| Length = 231 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 164 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 209
>ANTP_DROSU (Q24645) Homeotic protein antennapedia| Length = 394 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 324 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 369
>BARH2_HUMAN (Q9NY43) BarH-like 2 homeobox protein| Length = 387 Score = 43.5 bits (101), Expect = 4e-04 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A Q+ LERSFE L + + +A L L QV W+QNRR +WK Sbjct: 233 RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 288
>HXA6_MOUSE (P09092) Homeobox protein Hox-A6 (Hox-1.2) (M5-4)| Length = 232 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 165 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 210
>HXA7_HUMAN (P31268) Homeobox protein Hox-A7 (Hox-1A) (Hox 1.1)| Length = 230 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 141 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 186
>DTH1_DUGTI (Q00400) Homeobox protein DTH-1| Length = 533 Score = 43.5 bits (101), Expect = 4e-04 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%) Frame = +1 Query: 241 LGGKKRRLAL---EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +G K++R L +Q+ LER F L + +A +GL P QV +WFQN R + K Sbjct: 374 IGKKRKRRVLFSKKQILELERHFRQKKYLSAPEREHLANLIGLSPTQVKIWFQNHRYKMK 433 Query: 412 TKQLER 429 E+ Sbjct: 434 RAHHEK 439
>HXB7_RAT (P18864) Homeobox protein Hox-B7| Length = 219 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 193
>HXB6A_BRARE (P15861) Homeobox protein Hox-B6a (Hox-B6) (Zf-22)| Length = 228 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 161 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 206
>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)| Length = 606 Score = 43.5 bits (101), Expect = 4e-04 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +1 Query: 238 GLGGKKRRLAL----EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 GL K+R+ Q++ LE+SFE L + + +A L L QV W+QNRR + Sbjct: 326 GLSKKQRKARTAFTDHQLQTLEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTK 385 Query: 406 W 408 W Sbjct: 386 W 386
>DLX2B_BRARE (Q98876) Homeobox protein Dlx2b (DLX-5) (Distal-less homeobox| protein 2b) Length = 276 Score = 43.5 bits (101), Expect = 4e-04 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR----WKTKQLERD 432 Q+ AL+R F+ L +A +A LGL QV +WFQNRR++ WK ++ D Sbjct: 136 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKLWKNGEIPAD 192
>BARH2_RAT (O88181) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 43.5 bits (101), Expect = 4e-04 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A Q+ LERSFE L + + +A L L QV W+QNRR +WK Sbjct: 230 RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 285
>BARH2_MOUSE (Q8VIB5) BarH-like 2 homeobox protein (Bar-class homeodomain| protein MBH1) (Homeobox protein B-H1) Length = 384 Score = 43.5 bits (101), Expect = 4e-04 Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Frame = +1 Query: 250 KKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +K R A Q+ LERSFE L + + +A L L QV W+QNRR +WK Sbjct: 230 RKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWK 285
>SMOX4_SCHMA (Q26603) Homeobox protein SMOX-4 (Fragment)| Length = 98 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQL 423 Q+ LER F L + +A++L L +QV +WFQNRR RW+ + L Sbjct: 48 QLICLEREFSHIQYLSRIDRIHLAQNLNLTEKQVKIWFQNRRVRWRKRNL 97
>HXC12_MOUSE (P31313) Homeobox protein Hox-C12 (Hox-3.8) (Fragment)| Length = 60 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 31/46 (67%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q+R LER F + ++ E++ +++R L L RQV +WFQNRR + K Sbjct: 12 QIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEK 57
>HMSA_SALSA (P09636) Homeobox protein S12-A (Fragment)| Length = 75 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 12 QTLELEKEFHFNRYLTRRRRVEIAHVLCLTERQIKIWFQNRRMKWK 57
>HM90_APIME (P15860) Homeobox protein H90 (Fragment)| Length = 74 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 19 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 64
>CDX4_MOUSE (Q07424) Homeobox protein CDX-4 (Caudal-type homeobox protein 4)| Length = 282 Score = 43.5 bits (101), Expect = 4e-04 Identities = 19/40 (47%), Positives = 27/40 (67%) Frame = +1 Query: 286 LERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 LE+ F + + RK+ +A +LGL RQV +WFQNRRA+ Sbjct: 186 LEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAK 225
>CDX2_MESAU (Q04649) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| Length = 313 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/40 (50%), Positives = 25/40 (62%) Frame = +1 Query: 286 LERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 LE+ F + RKA +A LGL RQV +WFQNRRA+ Sbjct: 200 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 239
>CDX2_HUMAN (Q99626) Homeobox protein CDX-2 (Caudal-type homeobox protein 2)| (CDX-3) Length = 313 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/40 (50%), Positives = 25/40 (62%) Frame = +1 Query: 286 LERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRAR 405 LE+ F + RKA +A LGL RQV +WFQNRRA+ Sbjct: 201 LEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK 240
>HXB7_BOVIN (Q9TT89) Homeobox protein Hox-B7| Length = 217 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 148 QTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 193
>HXA6_HUMAN (P31267) Homeobox protein Hox-A6 (Hox-1B)| Length = 233 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 166 QTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK 211
>ANTP_DROME (P02833) Homeotic protein antennapedia| Length = 378 Score = 43.5 bits (101), Expect = 4e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 308 QTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWK 353
>DLX2_HUMAN (Q07687) Homeobox protein DLX-2| Length = 328 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q+ AL+R F+ L +A +A LGL QV +WFQNRR+++K Sbjct: 163 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFK 208
>HXB7A_XENLA (Q91771) Homeobox protein Hox-B7 A (XlHbox-2 A) (MM3)| Length = 220 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/46 (43%), Positives = 26/46 (56%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q LE+ F + L R+ IA L L RQ+ +WFQNRR +WK Sbjct: 151 QTLELEKEFHFNRYLTRRRRIEIAHVLCLTERQIKIWFQNRRMKWK 196
>BSH_DROME (Q04787) Brain-specific homeobox protein| Length = 427 Score = 43.1 bits (100), Expect = 5e-04 Identities = 24/55 (43%), Positives = 29/55 (52%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFN 438 Q+ LE+ FE L + +A LGL QV WFQNRR + K KQL R N Sbjct: 283 QLSGLEKRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHK-KQLRRRDN 336
>HME2_HUMAN (P19622) Homeobox protein engrailed-2 (Hu-En-2)| Length = 333 Score = 43.1 bits (100), Expect = 5e-04 Identities = 17/47 (36%), Positives = 32/47 (68%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + L +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 254 EQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIK 300
>EMX2_HUMAN (Q04743) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 252 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/53 (37%), Positives = 33/53 (62%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+ LE +FE ++ + + ++A L L QV VWFQNRR ++K ++LE + Sbjct: 165 QLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEE 217
>GSC_HUMAN (P56915) Homeobox protein goosecoid| Length = 257 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 EQ+ ALE F+ D + ++AR + L +V VWF+NRRA+W+ ++ Sbjct: 170 EQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQK 219
>GSC_CHICK (P53545) Homeobox protein goosecoid| Length = 245 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 EQ+ ALE F+ D + ++AR + L +V VWF+NRRA+W+ ++ Sbjct: 160 EQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQK 209
>HXD13_HETFR (Q9IA17) Homeobox protein Hox-D13| Length = 284 Score = 43.1 bits (100), Expect = 5e-04 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q++ LER + + + E++ RI+ L RQV +WFQNRR + K Sbjct: 217 GRKKRVPYTKTQLKELEREYATNKFITKEKRRRISTATNLTERQVTIWFQNRRVKEK 273
>HXADA_BRARE (Q6W990) Homeobox protein Hox-A13a| Length = 310 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q++ LER + + + +++ RI+ L RQV +WFQNRR + K Sbjct: 244 GRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAQTNLSERQVTIWFQNRRVKEK 300
>HXC1A_BRARE (Q98SH9) Homeobox protein Hox-C1a| Length = 302 Score = 43.1 bits (100), Expect = 5e-04 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = +1 Query: 244 GGKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 GG + +Q+ LE+ F + L R+ IA L L QV +WFQNRR + K Sbjct: 216 GGSRTNFTTKQLTELEKEFHFNKYLTRARRIEIANPLQLSETQVKIWFQNRRMKQK 271
>EMX2_MOUSE (Q04744) Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty| spiracles-like protein 2) Length = 253 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/53 (37%), Positives = 33/53 (62%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERD 432 Q+ LE +FE ++ + + ++A L L QV VWFQNRR ++K ++LE + Sbjct: 166 QLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEE 218
>DLX2_MOUSE (P40764) Homeobox protein DLX-2 (Homeobox protein TES-1)| Length = 332 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q+ AL+R F+ L +A +A LGL QV +WFQNRR+++K Sbjct: 166 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFK 211
>HXA7_RAT (P09634) Homeobox protein Hox-A7 (Hox-1.1) (R5) (Fragment)| Length = 105 Score = 43.1 bits (100), Expect = 5e-04 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +1 Query: 238 GLGGKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G GK+ R Q LE+ F + L R IA L L RQ+ +WFQNRR +WK Sbjct: 2 GPDGKRGRQTYTRYQTLELEKEFHFNRYLTRRRAVEIAHALCLTERQIKIWFQNRRMKWK 61
>HXA5_SALSA (P09637) Homeobox protein Hox-A5 (S12-B) (Fragment)| Length = 78 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/55 (36%), Positives = 29/55 (52%) Frame = +1 Query: 247 GKKRRLALEQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+ + Q LE+ F + L R+ +A L L RQ+ +WFQNRR +WK Sbjct: 3 GRGQTYTRYQTLELEKEFHFNRYLTRRRRIEMAHALCLSERQIKIWFQNRRMKWK 57
>HMEN_HELTR (P23397) Homeobox protein Ht-En (Fragment)| Length = 98 Score = 43.1 bits (100), Expect = 5e-04 Identities = 17/47 (36%), Positives = 31/47 (65%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 +Q+ L+R F + L +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 13 DQLARLKREFSENKYLTEQRRTCLAKELNLNESQIKIWFQNKRAKMK 59
>GSC_MOUSE (Q02591) Homeobox protein goosecoid| Length = 256 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 EQ+ ALE F+ D + ++AR + L +V VWF+NRRA+W+ ++ Sbjct: 170 EQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQK 219
>DLX2A_BRARE (P50574) Homeobox protein Dlx2a (DLX-2) (Distal-less homeobox gene| 2a) Length = 270 Score = 43.1 bits (100), Expect = 5e-04 Identities = 20/46 (43%), Positives = 29/46 (63%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 Q+ AL+R F+ L +A +A LGL QV +WFQNRR+++K Sbjct: 134 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFK 179
>HME2_MOUSE (P09066) Homeobox protein engrailed-2 (Mo-En-2)| Length = 324 Score = 43.1 bits (100), Expect = 5e-04 Identities = 17/47 (36%), Positives = 32/47 (68%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 EQ++ L+ F+ + L +R+ +A++L L+ Q+ +WFQN+RA+ K Sbjct: 245 EQLQRLKAEFQTNRYLTEQRRQSLAQELSLNESQIKIWFQNKRAKIK 291
>GSC_BRARE (P53544) Homeobox protein goosecoid (ZGSC)| Length = 240 Score = 43.1 bits (100), Expect = 5e-04 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = +1 Query: 271 EQVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 EQ+ ALE F+ D + ++AR + L +V VWF+NRRA+W+ ++ Sbjct: 156 EQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQK 205
>HXA13_MOUSE (Q62424) Homeobox protein Hox-A13 (Hox-1.10)| Length = 386 Score = 42.7 bits (99), Expect = 6e-04 Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +1 Query: 247 GKKRRLALE--QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G+K+R+ Q++ LER + + + +++ RI+ L RQV +WFQNRR + K Sbjct: 320 GRKKRVPYTKVQLKELEREYATNKFITKDKRRRISATTNLSERQVTIWFQNRRVKEK 376
>BARX1_HUMAN (Q9HBU1) Homeobox protein BarH-like 1| Length = 225 Score = 42.7 bits (99), Expect = 6e-04 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 244 GGKKRRLALE-QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G + R + E Q+ LE+ FE L + +A LGL QV W+QNRR +WK Sbjct: 113 GRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 169
>BARX1_CHICK (Q9W6D8) Homeobox protein BarH-like 1 (Fragment)| Length = 207 Score = 42.7 bits (99), Expect = 6e-04 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 244 GGKKRRLALE-QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 411 G + R + E Q+ LE+ FE L + +A LGL QV W+QNRR +WK Sbjct: 95 GRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWK 151
>HXD8_MOUSE (P23463) Homeobox protein Hox-D8 (Hox-4.3) (Hox-5.4)| Length = 289 Score = 42.7 bits (99), Expect = 6e-04 Identities = 20/54 (37%), Positives = 30/54 (55%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDF 435 Q LE+ F + L +R+ ++ L L RQV +WFQNRR +WK + + F Sbjct: 206 QTLELEKEFLFNPYLTRKRRIEVSHTLALTERQVKIWFQNRRMKWKKENNKDKF 259
>RX_DUGJA (O97039) Retinal homeobox protein Rax (DjRax) (Fragment)| Length = 268 Score = 42.7 bits (99), Expect = 6e-04 Identities = 19/49 (38%), Positives = 30/49 (61%) Frame = +1 Query: 274 QVRALERSFEADNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQ 420 Q+ LER+FE + D + +A + L +V VWFQNRRA+W+ ++ Sbjct: 98 QLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRRQE 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,357,967 Number of Sequences: 219361 Number of extensions: 438335 Number of successful extensions: 3163 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 3119 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3163 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
