ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23d09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene) Length = 915 Score = 410 bits (207), Expect = e-111 Identities = 293/324 (90%) Strand = Plus / Plus Query: 6 atggcgccgctcccaccctggaggccagggtgcctcctacccctcctctccgtcgtcgct 65 |||||||||||| || || ||||||||| |||||||| ||||||||||||||| ||| Sbjct: 1 atggcgccgctcgcagcccggaggccagcctgcctcctggccctcctctccgtcgccgcg 60 Query: 66 gccttattcctaaccccgccggccttggcggcnnnnnnnaagaccggccaggtgacggtg 125 ||||||||||| |||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 61 gccttattcctgaccccgacggccttggcggcggggggaaagaccggccaggtgacggtg 120 Query: 126 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 185 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 121 ttctggggacggaacaaggccgagggctccctgcgtgaggcctgcgactccggtatgtac 180 Query: 186 accatggtcaccatgtccttcctcgacgtctttggcgccaatggcaagtaccaccccgag 245 |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||| ||| Sbjct: 181 accatggtcaccatgtccttgctcgacgtcttcggcgccaacggcaagtaccacctcgac 240 Query: 246 gtctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 241 ctctccggccatgacctctcctccgtcggcgccgacatcaagcactgccagtccaagggc 300 Query: 306 gtccccgtctccctctccatcggc 329 ||||| |||||||||||||||||| Sbjct: 301 gtccctgtctccctctccatcggc 324
>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III, complete cds Length = 934 Score = 339 bits (171), Expect = 3e-90 Identities = 207/219 (94%) Strand = Plus / Plus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 114 aagaccggccaggtgacggtgttctggggccggaacaaggccgaggggtccctgcgcgag 173 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgcc 224 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 174 gcctgcgactccggcatgtacaccatggtcaccatgtctttcctcgacgtctttggcgcc 233 Query: 225 aatggcaagtaccaccccgaggtctccggccacgacctgtcctccgtcggcgccgacatc 284 || || |||||||||| ||| |||||||||||||||| ||| ||||||||||||||||| Sbjct: 234 aaaggaaagtaccacctcgacctctccggccacgacctctccgccgtcggcgccgacatc 293 Query: 285 aagcactgccagttcaagggcgtccccgtctccctctcc 323 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 294 aagcactgccagtccaagggcgtccccgtctccctctcc 332 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 aatggcgccgctcccaccctggaggccag 33 ||||||||||||| ||||| ||||||||| Sbjct: 14 aatggcgccgctcgcacccgggaggccag 42
>ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 109 bits (55), Expect = 6e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 114 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 173 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 115 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 174 Query: 174 tccggcatgtacaccatggtcaccatgtccttcctcgacgtct 216 ||||| |||||||||||||| ||||||||||||| |||||| Sbjct: 175 accggcttgtacaccatggtcgtcatgtccttcctcaacgtct 217 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||| |||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 275 tcggcggcgacgtcaagcactgccagcgcaagggcgtcctcgtctccctcgccatcggc 333
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 6e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 114 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 173 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 26161676 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 26161735 Query: 174 tccggcatgtacaccatggtcaccatgtccttcctcgacgtct 216 ||||| |||||||||||||| ||||||||||||| |||||| Sbjct: 26161736 accggcttgtacaccatggtcgtcatgtccttcctcaacgtct 26161778 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||| |||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 26161836 tcggcggcgacgtcaagcactgccagcgcaagggcgtcctcgtctccctcgccatcggc 26161894 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 454150 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 454091 Query: 328 gc 329 || Sbjct: 454090 gc 454089 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 ||||||||||||||||||||||| |||| Sbjct: 7138586 cgtcggcgccgacatcaagcactaccag 7138559
>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full insert sequence Length = 1165 Score = 109 bits (55), Expect = 6e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 114 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 173 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 163 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 222 Query: 174 tccggcatgtacaccatggtcaccatgtccttcctcgacgtct 216 ||||| |||||||||||||| ||||||||||||| |||||| Sbjct: 223 accggcttgtacaccatggtcgtcatgtccttcctcaacgtct 265 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||| |||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 323 tcggcggcgacgtcaagcactgccagcgcaagggcgtcctcgtctccctcgccatcggc 381
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 109 bits (55), Expect = 6e-21 Identities = 91/103 (88%) Strand = Plus / Plus Query: 114 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 173 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 53534 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 53593 Query: 174 tccggcatgtacaccatggtcaccatgtccttcctcgacgtct 216 ||||| |||||||||||||| ||||||||||||| |||||| Sbjct: 53594 accggcttgtacaccatggtcgtcatgtccttcctcaacgtct 53636 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||| |||| |||||||||||||| ||||||||||| |||||||||| |||||||| Sbjct: 53694 tcggcggcgacgtcaagcactgccagcgcaagggcgtcctcgtctccctcgccatcggc 53752
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 107 bits (54), Expect = 2e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 14490753 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 14490694 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgt 214 |||||||||||||| | ||||||||||||| ||||||||||||| |||| Sbjct: 14490693 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgt 14490644 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||| ||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 14490590 tcggcgacgacatcaagcactgccagttcatcggcgtcccggtgtcgctctccatcggc 14490532 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 11388347 ccgtcggcgccgacatcaagcactgccagt 11388376 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 cccctcctctccgtcgtcgctgcc 68 ||||||||||||||||||| |||| Sbjct: 15503978 cccctcctctccgtcgtcgttgcc 15503955
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 107 bits (54), Expect = 2e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 83927 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 83868 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgt 214 |||||||||||||| | ||||||||||||| ||||||||||||| |||| Sbjct: 83867 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgt 83818 Score = 69.9 bits (35), Expect = 5e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||| ||||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct: 83764 tcggcgacgacatcaagcactgccagttcatcggcgtcccggtgtcgctctccatcggc 83706
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 85.7 bits (43), Expect = 8e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| | Sbjct: 60905 tctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtaca 60964 Query: 307 tccccgtctccctctccatcggc 329 ||||||| ||||||||||||| Sbjct: 60965 tccccgtgctcctctccatcggc 60987 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 75794 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 75853 Query: 328 gc 329 || Sbjct: 75854 gc 75855 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 67353 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 67412 Query: 328 gc 329 || Sbjct: 67413 gc 67414 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 123 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 182 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 60784 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 60843 Query: 183 tacaccatggtcaccatgtccttcctcgacgtctt 217 |||||| |||| ||| |||||||||| |||||| Sbjct: 60844 tacacctccgtcatcatctccttcctcgccgtctt 60878 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 81668 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 81726 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 57891 ccgtcggcgccgacatcaagcactgccagt 57920 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 84428 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 84369 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 209 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 84368 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 84324 Score = 56.0 bits (28), Expect = 7e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 270 gtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||| ||||||||||||||| |||| | |||||||| ||||||| ||||| Sbjct: 87166 gtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggc 87107 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 |||||||||||||||||||||||||||| Sbjct: 84267 cgtcggcgccgacatcaagcactgccag 84240 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 51246 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 51187 Query: 307 tc 308 || Sbjct: 51186 tc 51185 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggcgtc 308 |||||||||||||||| |||||||||| |||||||||| Sbjct: 55926 cgtcggcgccgacatccgccactgccagtccaagggcgtc 55887 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgcca 295 ||||||||||||| ||||||||||||| Sbjct: 88736 cgtcggcgccgacgtcaagcactgcca 88710 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| Sbjct: 63730 tctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcgcaagggc 63788
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 85.7 bits (43), Expect = 8e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| | Sbjct: 28101638 tctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtaca 28101697 Query: 307 tccccgtctccctctccatcggc 329 ||||||| ||||||||||||| Sbjct: 28101698 tccccgtgctcctctccatcggc 28101720 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28117239 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28117298 Query: 328 gc 329 || Sbjct: 28117299 gc 28117300 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28108798 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28108857 Query: 328 gc 329 || Sbjct: 28108858 gc 28108859 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 123 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 182 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28101517 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28101576 Query: 183 tacaccatggtcaccatgtccttcctcgacgtctt 217 |||||| |||| ||| |||||||||| |||||| Sbjct: 28101577 tacacctccgtcatcatctccttcctcgccgtctt 28101611 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 28123113 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 28123171 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 28098624 ccgtcggcgccgacatcaagcactgccagt 28098653 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28125873 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28125814 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 209 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28125813 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28125769 Score = 56.0 bits (28), Expect = 7e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 270 gtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||| ||||||||||||||| |||| | |||||||| ||||||| ||||| Sbjct: 28128611 gtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggc 28128552 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 |||||||||||||||||||||||||||| Sbjct: 28125712 cgtcggcgccgacatcaagcactgccag 28125685 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 28091979 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 28091920 Query: 307 tc 308 || Sbjct: 28091919 tc 28091918 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggcgtc 308 |||||||||||||||| |||||||||| |||||||||| Sbjct: 28096659 cgtcggcgccgacatccgccactgccagtccaagggcgtc 28096620 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgcca 295 ||||||||||||| ||||||||||||| Sbjct: 28130181 cgtcggcgccgacgtcaagcactgcca 28130155 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| Sbjct: 28105175 tctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcgcaagggc 28105233 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggc 305 ||||||| ||||||||||||||||||| ||||||| Sbjct: 28104485 cgtcggcaacgacatcaagcactgccagcgcaagggc 28104521
>dbj|AK073800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D20, full insert sequence Length = 1106 Score = 85.7 bits (43), Expect = 8e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| | Sbjct: 314 tctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtaca 373 Query: 307 tccccgtctccctctccatcggc 329 ||||||| ||||||||||||| Sbjct: 374 tccccgtgctcctctccatcggc 396 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 123 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 182 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 193 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 252 Query: 183 tacaccatggtcaccatgtccttcctcgacgtctt 217 |||||| |||| ||| |||||||||| |||||| Sbjct: 253 tacacctccgtcatcatctccttcctcgccgtctt 287
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 85.7 bits (43), Expect = 8e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| | Sbjct: 28086516 tctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtaca 28086575 Query: 307 tccccgtctccctctccatcggc 329 ||||||| ||||||||||||| Sbjct: 28086576 tccccgtgctcctctccatcggc 28086598 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28102117 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28102176 Query: 328 gc 329 || Sbjct: 28102177 gc 28102178 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28093676 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28093735 Query: 328 gc 329 || Sbjct: 28093736 gc 28093737 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 123 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 182 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28086395 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28086454 Query: 183 tacaccatggtcaccatgtccttcctcgacgtctt 217 |||||| |||| ||| |||||||||| |||||| Sbjct: 28086455 tacacctccgtcatcatctccttcctcgccgtctt 28086489 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 28107991 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 28108049 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 28083502 ccgtcggcgccgacatcaagcactgccagt 28083531 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28110751 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28110692 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 209 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28110691 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28110647 Score = 56.0 bits (28), Expect = 7e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 270 gtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||| ||||||||||||||| |||| | |||||||| ||||||| ||||| Sbjct: 28113489 gtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggc 28113430 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 |||||||||||||||||||||||||||| Sbjct: 28110590 cgtcggcgccgacatcaagcactgccag 28110563 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 28076857 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 28076798 Query: 307 tc 308 || Sbjct: 28076797 tc 28076796 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggcgtc 308 |||||||||||||||| |||||||||| |||||||||| Sbjct: 28081537 cgtcggcgccgacatccgccactgccagtccaagggcgtc 28081498 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgcca 295 ||||||||||||| ||||||||||||| Sbjct: 28115059 cgtcggcgccgacgtcaagcactgcca 28115033 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| Sbjct: 28090053 tctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcgcaagggc 28090111 Score = 42.1 bits (21), Expect = 1.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggc 305 ||||||| ||||||||||||||||||| ||||||| Sbjct: 28089363 cgtcggcaacgacatcaagcactgccagcgcaagggc 28089399
>dbj|D55708.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1049 Score = 85.7 bits (43), Expect = 8e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| | Sbjct: 256 tctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaagtaca 315 Query: 307 tccccgtctccctctccatcggc 329 ||||||| ||||||||||||| Sbjct: 316 tccccgtgctcctctccatcggc 338 Score = 69.9 bits (35), Expect = 5e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 123 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 182 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 135 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 194 Query: 183 tacaccatggtcaccatgtccttcctcgacgtctt 217 |||||| |||| ||| |||||||||| |||||| Sbjct: 195 tacacctccgtcatcatctccttcctcgccgtctt 229
>dbj|AK058882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B10, full insert sequence Length = 1019 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 290 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 349 Query: 328 gc 329 || Sbjct: 350 gc 351
>dbj|AB027426.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-g), partial cds, clone:C63579 Length = 383 Score = 83.8 bits (42), Expect = 3e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 245 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 304 Query: 328 gc 329 || Sbjct: 305 gc 306
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 79.8 bits (40), Expect = 5e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 122 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 181 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 59972 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 60031 Query: 182 gtacaccatggtcaccatgtccttcctc 209 |||| || |||| ||| ||||||||| Sbjct: 60032 ctacaacaccgtcatcatctccttcctc 60059 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 15063 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 15004 Query: 307 tccccgtctccctctccatcggc 329 ||| |||| |||| |||||||| Sbjct: 15003 tcctcgtcctcctcgccatcggc 14981 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 146 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 205 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 15167 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 15108 Query: 206 cctc 209 |||| Sbjct: 15107 cctc 15104 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaaggg 304 ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 71257 tctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtccaaggg 71314 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 129 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 188 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 93520 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 93579 Query: 189 atggtcaccatgtccttcctc 209 | |||| ||| ||||||||| Sbjct: 93580 accgtcatcatttccttcctc 93600 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 93662 ccgtcggccccgacatcaagtactgccaatccaagggc 93699 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 127 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 179 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 71134 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 71186
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 5e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 122 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 181 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 8848047 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 8848106 Query: 182 gtacaccatggtcaccatgtccttcctc 209 |||| || |||| ||| ||||||||| Sbjct: 8848107 ctacaacaccgtcatcatctccttcctc 8848134 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 8803138 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 8803079 Query: 307 tccccgtctccctctccatcggc 329 ||| |||| |||| |||||||| Sbjct: 8803078 tcctcgtcctcctcgccatcggc 8803056 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 146 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 205 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 8803242 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 8803183 Query: 206 cctc 209 |||| Sbjct: 8803182 cctc 8803179 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaaggg 304 ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 8859332 tctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtccaaggg 8859389 Score = 50.1 bits (25), Expect = 0.005 Identities = 67/81 (82%) Strand = Plus / Plus Query: 129 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 188 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 8881595 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 8881654 Query: 189 atggtcaccatgtccttcctc 209 | |||| ||| ||||||||| Sbjct: 8881655 accgtcatcatttccttcctc 8881675 Score = 44.1 bits (22), Expect = 0.28 Identities = 34/38 (89%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 8881737 ccgtcggccccgacatcaagtactgccaatccaagggc 8881774 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 127 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 179 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 8859209 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 8859261
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 135580 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 135521 Query: 307 tccccgtctccctctccatcggc 329 ||| |||| |||| |||||||| Sbjct: 135520 tcctcgtcctcctcgccatcggc 135498 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Minus Query: 146 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 205 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 135684 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 135625 Query: 206 cctc 209 |||| Sbjct: 135624 cctc 135621
>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full insert sequence Length = 1176 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 363 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 421
>dbj|AK065866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045O11, full insert sequence Length = 1198 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 288 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 347 Query: 307 tccccgtctccctctccatcggc 329 ||| |||| |||| |||||||| Sbjct: 348 tcctcgtcctcctcgccatcggc 370 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 146 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 205 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 184 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 243 Query: 206 cctc 209 |||| Sbjct: 244 cctc 247
>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full insert sequence Length = 1234 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 364 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 422
>dbj|AK062114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C02, full insert sequence Length = 1199 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 287 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 346 Query: 307 tccccgtctccctctccatcggc 329 ||| |||| |||| |||||||| Sbjct: 347 tcctcgtcctcctcgccatcggc 369 Score = 56.0 bits (28), Expect = 7e-05 Identities = 55/64 (85%) Strand = Plus / Plus Query: 146 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 205 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 183 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 242 Query: 206 cctc 209 |||| Sbjct: 243 cctc 246
>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1220 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 338 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 396
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C60571 Length = 1220 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 350 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 408
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C11701 Length = 1171 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 308 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 366
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C12269 Length = 1214 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 348 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 406
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C3540 Length = 1229 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 347 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 405
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds,clone:C10295 Length = 1199 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 329 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 387
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase homologue (OsChib3H-a)H-, complete cds, clone:C60129 Length = 1187 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||||||||||||||| |||| | || ||||| ||||||||||||| Sbjct: 332 tcggcgccgacatcaagcactgccagtccaagaacatcttcgtcttcctctccatcggc 390
>ref|XM_476387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 197 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 256 Query: 328 gc 329 || Sbjct: 257 gc 258
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 76056 ccgtcggcgccgacatcaagcactgccagt 76085
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 56314 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 56255 Query: 328 gc 329 || Sbjct: 56254 gc 56253
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full insert sequence Length = 1008 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 226 ccgtcggcgccgacatcaagcactgccagt 255
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full insert sequence Length = 1150 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 273 ccgtcggcgccgacatcaagcactgccagt 302
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 60.0 bits (30), Expect = 5e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 ||||||| |||||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 8062 ccgtcggtgccgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 8003 Query: 328 gc 329 || Sbjct: 8002 gc 8001
>dbj|AB027427.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-h), partial cds, clone:S2321 Length = 500 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagcactgccagt 297 |||||||||||||||||||||||||||||| Sbjct: 300 ccgtcggcgccgacatcaagcactgccagt 329
>dbj|AK106678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A12, full insert sequence Length = 938 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 762 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 703 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 209 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 702 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 658 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 |||||||||||||||||||||||||||| Sbjct: 601 cgtcggcgccgacatcaagcactgccag 574
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full insert sequence Length = 1161 Score = 58.0 bits (29), Expect = 2e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 105 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 164 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 175 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 234 Query: 165 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 209 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 235 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 279 Score = 56.0 bits (28), Expect = 7e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgccag 296 |||||||||||||||||||||||||||| Sbjct: 336 cgtcggcgccgacatcaagcactgccag 363
>dbj|AK102505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E15, full insert sequence Length = 1166 Score = 56.0 bits (28), Expect = 7e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 270 gtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||| ||||||||||||||| |||| | |||||||| ||||||| ||||| Sbjct: 287 gtcggcgccgacgtcaagcactgccagtccaagaacatccccgtcctcctctccgtcggc 346
>ref|XM_483351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 317 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 375
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 25755530 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 25755588 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Minus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||| |||||||||||| | ||| | || |||||| ||||||||||||| Sbjct: 25771872 tcggcgccgacaacaagcactgccaatccaaacacatctccgtcttcctctccatcggc 25771814 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccag 296 |||||||||| ||| | || |||||||||||||||||| ||||||||| Sbjct: 25752393 tctccggccatgacgtcaccgccgtcggcgccgacatcatccactgccag 25752344
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 27741 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 27799 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Minus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||| |||||||||||| | ||| | || |||||| ||||||||||||| Sbjct: 44083 tcggcgccgacaacaagcactgccaatccaaacacatctccgtcttcctctccatcggc 44025 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccag 296 |||||||||| ||| | || |||||||||||||||||| ||||||||| Sbjct: 24604 tctccggccatgacgtcaccgccgtcggcgccgacatcatccactgccag 24555
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 133278 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 133336 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Minus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccag 296 |||||||||| ||| | || |||||||||||||||||| ||||||||| Sbjct: 130141 tctccggccatgacgtcaccgccgtcggcgccgacatcatccactgccag 130092
>dbj|AK073267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L23, full insert sequence Length = 1368 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 317 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 375
>dbj|D55709.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1191 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 296 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 354
>dbj|AB027425.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-d), complete cds, clone:C12856 Length = 1284 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 271 tcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 ||||||||||||||| |||||||| ||||||| |||| |||| ||||||||||||| Sbjct: 317 tcggcgccgacatcacccactgccatttcaaggccgtctacgtcctcctctccatcggc 375
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840850 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840791 Query: 328 gc 329 || Sbjct: 10840790 gc 10840789 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 tcctacccctcctctccgtcgtcg 63 |||| ||||||||||||||||||| Sbjct: 3257666 tcctccccctcctctccgtcgtcg 3257643
>dbj|AK122053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G24, full insert sequence Length = 2161 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 1146 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 1205 Query: 307 tc 308 || Sbjct: 1206 tc 1207
>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full insert sequence Length = 1152 Score = 52.0 bits (26), Expect = 0.001 Identities = 50/58 (86%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaaggg 304 ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| |||||| Sbjct: 283 tctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtccaaggg 340 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 127 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 179 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 160 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 212
>dbj|AK073757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O15, full insert sequence Length = 1281 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 266 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 325 Query: 307 tc 308 || Sbjct: 326 tc 327
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840549 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840490 Query: 328 gc 329 || Sbjct: 10840489 gc 10840488 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 tcctacccctcctctccgtcgtcg 63 |||| ||||||||||||||||||| Sbjct: 3257611 tcctccccctcctctccgtcgtcg 3257588
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Minus Query: 268 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 327 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 107199 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 107140 Query: 328 gc 329 || Sbjct: 107139 gc 107138
>dbj|D55714.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1167 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 246 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 305 Query: 307 tc 308 || Sbjct: 306 tc 307
>dbj|AB027423.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), partial cds, clone:C62532 Length = 989 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 228 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 287 Query: 307 tc 308 || Sbjct: 288 tc 289
>dbj|AB027422.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C62515 Length = 996 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 232 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 291 Query: 307 tc 308 || Sbjct: 292 tc 293
>dbj|AB027421.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C60416 Length = 1416 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 306 |||||||||||||||| | |||||||||||||||| |||||||||| |||||||| Sbjct: 242 tctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtccaagggcg 301 Query: 307 tc 308 || Sbjct: 302 tc 303
>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase inhibitor protein Length = 2143 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgccagt 297 |||||| |||||||||||||||||||||| Sbjct: 1266 cgtcggtgccgacatcaagcactgccagt 1294
>ref|NM_186678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 897 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 ||||||||||||||||||||||| |||| Sbjct: 778 cgtcggcgccgacatcaagcactaccag 751
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 48.1 bits (24), Expect = 0.018 Identities = 27/28 (96%) Strand = Plus / Minus Query: 269 cgtcggcgccgacatcaagcactgccag 296 ||||||||||||||||||||||| |||| Sbjct: 165275 cgtcggcgccgacatcaagcactaccag 165248
>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full insert sequence Length = 1317 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggcgtc 308 |||||||||||||||| |||||||||| |||||||||| Sbjct: 347 cgtcggcgccgacatccgccactgccagtccaagggcgtc 386
>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c), complete cds, clone:C12024 Length = 1148 Score = 48.1 bits (24), Expect = 0.018 Identities = 36/40 (90%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgccagttcaagggcgtc 308 |||||||||||||||| |||||||||| |||||||||| Sbjct: 299 cgtcggcgccgacatccgccactgccagtccaagggcgtc 338
>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full insert sequence Length = 1076 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| Sbjct: 297 tctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcgcaagggc 355
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full insert sequence Length = 1162 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgcca 295 ||||||||||||| ||||||||||||| Sbjct: 312 cgtcggcgccgacgtcaagcactgcca 338
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full insert sequence Length = 1193 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgcca 295 ||||||||||||| ||||||||||||| Sbjct: 316 cgtcggcgccgacgtcaagcactgcca 342
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full insert sequence Length = 1153 Score = 46.1 bits (23), Expect = 0.070 Identities = 26/27 (96%) Strand = Plus / Plus Query: 269 cgtcggcgccgacatcaagcactgcca 295 ||||||||||||| ||||||||||||| Sbjct: 303 cgtcggcgccgacgtcaagcactgcca 329
>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1145 Score = 46.1 bits (23), Expect = 0.070 Identities = 50/59 (84%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 305 |||||||||||||||| | ||||||| ||||||||||||||||||| ||||||| Sbjct: 275 tctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcgcaagggc 333
>ref|XM_483350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 894 Score = 44.1 bits (22), Expect = 0.28 Identities = 43/50 (86%) Strand = Plus / Plus Query: 247 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccag 296 |||||||||| ||| | || |||||||||||||||||| ||||||||| Sbjct: 245 tctccggccatgacgtcaccgccgtcggcgccgacatcatccactgccag 294
>gb|AC139154.3| Mus musculus chromosome 7 clone RP24-356B8, complete sequence Length = 164774 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 atcaagcactgccagttcaag 302 ||||||||||||||||||||| Sbjct: 129440 atcaagcactgccagttcaag 129420
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 268 ccgtcggcgccgacatcaagc 288 ||||||||||||||||||||| Sbjct: 2649855 ccgtcggcgccgacatcaagc 2649875
>gb|AC149062.3| Mus musculus BAC clone RP23-183E20 from 7, complete sequence Length = 229956 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 atcaagcactgccagttcaag 302 ||||||||||||||||||||| Sbjct: 134029 atcaagcactgccagttcaag 134049
>gb|AC156398.13| Mus musculus 6 BAC RP24-279F16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 170925 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 ctggaggccagggtgcctcctacc 46 |||||||||| ||||||||||||| Sbjct: 130939 ctggaggccaaggtgcctcctacc 130962
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 282 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||||||| || |||| || |||| ||||||||||||| Sbjct: 7513706 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggc 7513753
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 45 cccctcctctccgtcgtcgctgcc 68 ||||||||||||||||||| |||| Sbjct: 171493 cccctcctctccgtcgtcgttgcc 171470
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 4.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 282 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggc 329 |||||||||||||||| || |||| || |||| ||||||||||||| Sbjct: 107412 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggc 107459
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 tcctacccctcctctccgtcgtcg 63 |||| ||||||||||||||||||| Sbjct: 48052 tcctccccctcctctccgtcgtcg 48029
>gb|AY745934.1| Mus musculus clone 14-5B4-2 MMuLV retroviral integration site genomic sequence Length = 931 Score = 40.1 bits (20), Expect = 4.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ctggaggccagggtgcctcctacc 46 |||||||||| ||||||||||||| Sbjct: 244 ctggaggccaaggtgcctcctacc 221 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,975,901 Number of Sequences: 3902068 Number of extensions: 1975901 Number of successful extensions: 41275 Number of sequences better than 10.0: 76 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40762 Number of HSP's gapped (non-prelim): 483 length of query: 329 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 307 effective length of database: 17,147,199,772 effective search space: 5264190330004 effective search space used: 5264190330004 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
