ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23d06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191060.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1206 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Plus Query: 406 ggcatcctcggcatgttcttcgccgggtgggcggcccgcgtggctgcggatccccagttc 465 |||||||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||| Sbjct: 427 ggcatcctcggcatcttcctcgccgggtgggcggcacgcgtcgccgcggatccgcagttc 486 Query: 466 ccgttcaaggtgctcatggaggagctggtcggcgtcaccgcctgcgtgctcggcgacatg 525 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 487 ccgttcaaggtgctcatggaggagctcgtcggcgtcagcgcctgcgtgctcggcgacatg 546 Query: 526 tcctcccgccccaacttcggcctcaac 552 | |||||||| |||||||| |||||| Sbjct: 547 gcgtcccgcccgaacttcgggctcaac 573
>dbj|AP003570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0432B10 Length = 131918 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 406 ggcatcctcggcatgttcttcgccgggtgggcggcccgcgtggctgcggatccccagttc 465 |||||||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||| Sbjct: 50084 ggcatcctcggcatcttcctcgccgggtgggcggcacgcgtcgccgcggatccgcagttc 50025 Query: 466 ccgttcaaggtgctcatggaggagctggtcggcgtcaccgcctgcgtgctcggcgacatg 525 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 50024 ccgttcaaggtgctcatggaggagctcgtcggcgtcagcgcctgcgtgctcggcgacatg 49965 Query: 526 tcctcccgccccaacttcggcctcaac 552 | |||||||| |||||||| |||||| Sbjct: 49964 gcgtcccgcccgaacttcgggctcaac 49938
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 406 ggcatcctcggcatgttcttcgccgggtgggcggcccgcgtggctgcggatccccagttc 465 |||||||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||| Sbjct: 34552790 ggcatcctcggcatcttcctcgccgggtgggcggcacgcgtcgccgcggatccgcagttc 34552731 Query: 466 ccgttcaaggtgctcatggaggagctggtcggcgtcaccgcctgcgtgctcggcgacatg 525 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 34552730 ccgttcaaggtgctcatggaggagctcgtcggcgtcagcgcctgcgtgctcggcgacatg 34552671 Query: 526 tcctcccgccccaacttcggcctcaac 552 | |||||||| |||||||| |||||| Sbjct: 34552670 gcgtcccgcccgaacttcgggctcaac 34552644
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 406 ggcatcctcggcatgttcttcgccgggtgggcggcccgcgtggctgcggatccccagttc 465 |||||||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||| Sbjct: 4807 ggcatcctcggcatcttcctcgccgggtgggcggcacgcgtcgccgcggatccgcagttc 4748 Query: 466 ccgttcaaggtgctcatggaggagctggtcggcgtcaccgcctgcgtgctcggcgacatg 525 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 4747 ccgttcaaggtgctcatggaggagctcgtcggcgtcagcgcctgcgtgctcggcgacatg 4688 Query: 526 tcctcccgccccaacttcggcctcaac 552 | |||||||| |||||||| |||||| Sbjct: 4687 gcgtcccgcccgaacttcgggctcaac 4661
>dbj|AP003247.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0425G02 Length = 155432 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Minus Query: 406 ggcatcctcggcatgttcttcgccgggtgggcggcccgcgtggctgcggatccccagttc 465 |||||||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||| Sbjct: 128509 ggcatcctcggcatcttcctcgccgggtgggcggcacgcgtcgccgcggatccgcagttc 128450 Query: 466 ccgttcaaggtgctcatggaggagctggtcggcgtcaccgcctgcgtgctcggcgacatg 525 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 128449 ccgttcaaggtgctcatggaggagctcgtcggcgtcagcgcctgcgtgctcggcgacatg 128390 Query: 526 tcctcccgccccaacttcggcctcaac 552 | |||||||| |||||||| |||||| Sbjct: 128389 gcgtcccgcccgaacttcgggctcaac 128363
>dbj|AK121582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037D14, full insert sequence Length = 1404 Score = 196 bits (99), Expect = 5e-47 Identities = 135/147 (91%) Strand = Plus / Plus Query: 406 ggcatcctcggcatgttcttcgccgggtgggcggcccgcgtggctgcggatccccagttc 465 |||||||||||||| ||| |||||||||||||||| ||||| || |||||||| |||||| Sbjct: 406 ggcatcctcggcatcttcctcgccgggtgggcggcacgcgtcgccgcggatccgcagttc 465 Query: 466 ccgttcaaggtgctcatggaggagctggtcggcgtcaccgcctgcgtgctcggcgacatg 525 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 466 ccgttcaaggtgctcatggaggagctcgtcggcgtcagcgcctgcgtgctcggcgacatg 525 Query: 526 tcctcccgccccaacttcggcctcaac 552 | |||||||| |||||||| |||||| Sbjct: 526 gcgtcccgcccgaacttcgggctcaac 552
>gb|BC033201.1| Homo sapiens FLJ35934 protein, mRNA (cDNA clone IMAGE:4869921), partial cds Length = 1396 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 527 cggctgccgccgcccccgcccccgc 551
>dbj|AK093253.1| Homo sapiens cDNA FLJ35934 fis, clone TESTI2011315 Length = 1868 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 1110 cggctgccgccgcccccgcccccgc 1134
>tpg|BK001591.1| TPA: TPA_exp: Homo sapiens chromosome 17 proximal SMS-REP low-copy repeat, genomic sequence Length = 255901 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 213340 cggctgccgccgcccccgcccccgc 213316
>tpg|BK001590.1| TPA: TPA_exp: Homo sapiens chromosome 17 middle SMS-REP low-copy repeat, genomic sequence Length = 240806 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 27188 cggctgccgccgcccccgcccccgc 27212
>gb|AC015818.32| Homo sapiens chromosome 17, clone RP11-434D2, complete sequence Length = 194767 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 148196 cggctgccgccgcccccgcccccgc 148172
>ref|NM_207453.1| Homo sapiens FLJ35934 protein (FLJ35934), mRNA Length = 1868 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 1110 cggctgccgccgcccccgcccccgc 1134
>emb|AL353997.3|HS37N07 Homo sapiens chromosome 17 from PAC RPCI-1 37N07 map 17p11.2 region D17S842-D17S953, complete sequence Length = 175103 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 304 cggctgccgccgcccccgcccccgc 328 ||||||||||||||||||||||||| Sbjct: 81060 cggctgccgccgcccccgcccccgc 81084
>ref|XM_472832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2280 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 2002 ctgccgccgcccccgcccccgc 2023
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgcgc 330 |||||||||||||||||||||| Sbjct: 129588 gccgccgcccccgcccccgcgc 129567
>ref|XM_755396.1| Ustilago maydis 521 hypothetical protein (UM04342.1) partial mRNA Length = 3324 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 2168 ctgccgccgcccccgcccccgc 2147
>emb|AL731567.6| Human DNA sequence from clone RP11-67C2 on chromosome 10 Contains the ALOX5 gene for arachidonate 5-lipoxygenase, a novel gene, the 3' end of a gene for cellular modulator of immune recognition (c-MIR) and five CpG islands, complete sequence Length = 129266 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ccggctgccgccgcccccgcccccgc 328 ||||||||| |||||||||||||||| Sbjct: 34438 ccggctgcccccgcccccgcccccgc 34413
>gb|AY341851.1| Oryza sativa (japonica cultivar-group) WRKY10 mRNA, complete cds Length = 2531 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 2083 ctgccgccgcccccgcccccgc 2104
>gb|AY341843.1| Oryza sativa (japonica cultivar-group) WRKY2 mRNA, complete cds Length = 3152 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 2739 ctgccgccgcccccgcccccgc 2760
>tpg|BK005038.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 35 (WRKY35) gene, complete cds Length = 3290 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 3012 ctgccgccgcccccgcccccgc 3033
>gb|AC023192.8| Homo sapiens chromosome 18, clone RP11-562H1, complete sequence Length = 167944 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 306 gctgccgccgcccccgcccccg 327 |||||||||||||||||||||| Sbjct: 59742 gctgccgccgcccccgcccccg 59721
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 23555614 ctgccgccgcccccgcccccgc 23555593 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gaggcgacggcggccgcgcag 406 ||||||||||||||||||||| Sbjct: 13205609 gaggcgacggcggccgcgcag 13205629
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgcgc 330 |||||||||||||||||||||| Sbjct: 13446125 gccgccgcccccgcccccgcgc 13446104 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cggaggcgacggcggccgcgc 404 ||||||||||||||||||||| Sbjct: 21287116 cggaggcgacggcggccgcgc 21287136 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 29520343 gccgccgcccccgcccccgc 29520324 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 18922985 gccgccgcccccgcccccgc 18923004
>dbj|AK066463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F17, full insert sequence Length = 3421 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgcgc 330 |||||||||||||||||||||| Sbjct: 77 gccgccgcccccgcccccgcgc 98
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgc 328 |||||||||||||||||||||| Sbjct: 111517 ctgccgccgcccccgcccccgc 111496
>gb|M38191.1|HUMLIPO5 Human 5-lipoxygenase gene, exon 1 Length = 2189 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ccggctgccgccgcccccgcccccgc 328 ||||||||| |||||||||||||||| Sbjct: 1708 ccggctgcccccgcccccgcccccgc 1683
>gb|J04520.1|HUMLIPOX Human 5-lipoxygenase protein gene, exon 1, clone lambda-1x12A Length = 877 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 303 ccggctgccgccgcccccgcccccgc 328 ||||||||| |||||||||||||||| Sbjct: 396 ccggctgcccccgcccccgcccccgc 371
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cggaggcgacggcggccgcgc 404 ||||||||||||||||||||| Sbjct: 73722 cggaggcgacggcggccgcgc 73742
>ref|XM_481779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 744 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgccccc 326 ||||||||||||||||||||| Sbjct: 336 gctgccgccgcccccgccccc 356
>ref|XM_475307.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 840 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cggaggcgacggcggccgcgc 404 ||||||||||||||||||||| Sbjct: 132 cggaggcgacggcggccgcgc 112
>ref|XM_471677.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gaggcgacggcggccgcgcag 406 ||||||||||||||||||||| Sbjct: 101 gaggcgacggcggccgcgcag 121
>ref|XM_616638.2| PREDICTED: Bos taurus similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC536506), mRNA Length = 3963 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgcg 329 ||||||||||||||||||||| Sbjct: 333 gccgccgcccccgcccccgcg 353
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 cggaggcgacggcggccgcgc 404 ||||||||||||||||||||| Sbjct: 4438 cggaggcgacggcggccgcgc 4458
>ref|XM_752520.1| Ustilago maydis 521 hypothetical protein (UM01466.1) partial mRNA Length = 1584 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 cggccttcaccgccgcgaggt 148 ||||||||||||||||||||| Sbjct: 213 cggccttcaccgccgcgaggt 233
>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12 Length = 333800 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 ctcgactcctccggccgcttcgccc 190 |||||| |||||||||||||||||| Sbjct: 92965 ctcgacacctccggccgcttcgccc 92989
>ref|XM_859467.1| PREDICTED: Canis familiaris hypothetical protein LOC609518 (LOC609518), mRNA Length = 1299 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 tgccgccgcccccgcccccgc 328 ||||||||||||||||||||| Sbjct: 380 tgccgccgcccccgcccccgc 360
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 ggcgacggcggccgcgcaggc 408 ||||||||||||||||||||| Sbjct: 262953 ggcgacggcggccgcgcaggc 262973
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 tccggccgcttcgccccgctc 195 ||||||||||||||||||||| Sbjct: 213229 tccggccgcttcgccccgctc 213209
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 gagctggtcggcgtcaccgcc 507 ||||||||||||||||||||| Sbjct: 130152 gagctggtcggcgtcaccgcc 130132
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgcg 329 ||||||||||||||||||||| Sbjct: 86174 gccgccgcccccgcccccgcg 86154
>gb|AF177934.1| Canis familiaris prostaglandin E2 receptor EP4 subtype mRNA, complete cds Length = 3103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 303 ccggctgccgccgcccccgcccccgcgct 331 ||||| |||||||||||| |||||||||| Sbjct: 1013 ccggccgccgccgccccctcccccgcgct 1041
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 393 cggcggccgcgcaggcatcctcggc 417 |||||||||||| |||||||||||| Sbjct: 1309653 cggcggccgcgccggcatcctcggc 1309677
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgccccc 326 ||||||||||||||||||||| Sbjct: 15461848 gctgccgccgcccccgccccc 15461868
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 ccggctgccgccgcccccgcccccg 327 ||||||||||||||| ||||||||| Sbjct: 19144481 ccggctgccgccgccgccgcccccg 19144505 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 303 ccggctgccgccgcccccgcccccgcgc 330 ||||| ||||||||||||||| |||||| Sbjct: 10876713 ccggccgccgccgcccccgccgccgcgc 10876740 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 6990988 gccgccgcccccgcccccgc 6991007
>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23, complete sequence Length = 165683 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 gaggcgacggcggccgcgcag 406 ||||||||||||||||||||| Sbjct: 137819 gaggcgacggcggccgcgcag 137839
>ref|NM_001003054.1| Canis familiaris prostaglandin E receptor 4 (subtype EP4) (PTGER4), mRNA Length = 3103 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 303 ccggctgccgccgcccccgcccccgcgct 331 ||||| |||||||||||| |||||||||| Sbjct: 1013 ccggccgccgccgccccctcccccgcgct 1041
>dbj|AP005470.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0043B22 Length = 158857 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 303 ccggctgccgccgcccccgcccccg 327 ||||||||||||||| ||||||||| Sbjct: 47966 ccggctgccgccgccgccgcccccg 47990
>dbj|AP004645.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_B10 Length = 148508 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgccccc 326 ||||||||||||||||||||| Sbjct: 9606 gctgccgccgcccccgccccc 9626
>dbj|AP004553.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1790_D02 Length = 162928 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgccccc 326 ||||||||||||||||||||| Sbjct: 147424 gctgccgccgcccccgccccc 147444
>dbj|AK102974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115K22, full insert sequence Length = 1088 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 384 cggaggcgacggcggccgcgc 404 ||||||||||||||||||||| Sbjct: 227 cggaggcgacggcggccgcgc 207
>ref|XM_476041.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3198 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 66 gccgccgcccccgcccccgc 85
>ref|XM_468556.1| Oryza sativa (japonica cultivar-group), mRNA Length = 5910 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 92 gccgccgcccccgcccccgc 73
>ref|XM_464419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 228 gccgccgcccccgcccccgc 209
>ref|XM_450999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 247 gccgccgcccccgcccccgc 266
>ref|XM_469544.1| Oryza sativa (japonica cultivar-group), mRNA Length = 717 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 201 gccgccgcccccgcccccgc 182
>ref|NM_017861.1| Homo sapiens phosphatidylinositol glycan, class X (PIGX), mRNA Length = 1876 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccacggccttcaccgccgcg 144 |||||||||||||||||||| Sbjct: 169 ccacggccttcaccgccgcg 188
>ref|NM_173159.1| Homo sapiens neuronal PAS domain protein 3 (NPAS3), transcript variant 2, mRNA Length = 2763 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2277 gccgccgcccccgcccccgc 2258
>ref|NM_022123.1| Homo sapiens neuronal PAS domain protein 3 (NPAS3), transcript variant 1, mRNA Length = 3428 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2295 gccgccgcccccgcccccgc 2276
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01, complete sequence Length = 164709 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 90363 gccgccgcccccgcccccgc 90382
>gb|AC137104.11| Mus musculus chromosome 1, clone RP23-241K20, complete sequence Length = 171622 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 21143 gccgccgcccccgcccccgc 21162
>gb|AC124110.8| Mus musculus chromosome 1, clone RP24-343C13, complete sequence Length = 149487 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 127185 gccgccgcccccgcccccgc 127204
>gb|AC119947.14| Mus musculus chromosome 19, clone RP24-446G1, complete sequence Length = 142066 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cgccgcccccgcccccgcgc 330 |||||||||||||||||||| Sbjct: 28681 cgccgcccccgcccccgcgc 28700
>gb|AC137000.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035I01, complete sequence Length = 147813 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 4845 gccgccgcccccgcccccgc 4826
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 gctgccgccgcccccgcccccgcg 329 |||||||||||||||||| ||||| Sbjct: 2538736 gctgccgccgcccccgccgccgcg 2538713
>ref|XM_369631.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG05833.4) partial mRNA Length = 2151 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 190 ccgctccgggccgcccccaccgcc 213 ||||||| |||||||||||||||| Sbjct: 1045 ccgctcctggccgcccccaccgcc 1068
>gb|AC116774.9| Mus musculus chromosome 3, clone RP24-361N19, complete sequence Length = 147728 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||||||||||||||| |||||| Sbjct: 34996 ctgccgccgcccccgccgccgcgc 34973
>ref|NM_005806.2| Homo sapiens oligodendrocyte lineage transcription factor 2 (OLIG2), mRNA Length = 2505 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 994 ctgccgccgcccccgccccc 975
>gb|AC163769.4| Pan troglodytes BAC clone CH251-59O12 from chromosome unknown, complete sequence Length = 185010 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 25586 gccgccgcccccgcccccgc 25605
>gb|AY157024.2| Homo sapiens peroxisome proliferative activated receptor gamma (PPARG) gene, complete cds Length = 148828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 1909 gccgccgcccccgcccccgc 1928
>ref|NM_002958.2| Homo sapiens RYK receptor-like tyrosine kinase (RYK), transcript variant 2, mRNA Length = 2951 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgcccc 325 |||||||||||||||||||| Sbjct: 220 gctgccgccgcccccgcccc 239
>ref|NM_001005861.1| Homo sapiens RYK receptor-like tyrosine kinase (RYK), transcript variant 1, mRNA Length = 2960 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgcccc 325 |||||||||||||||||||| Sbjct: 220 gctgccgccgcccccgcccc 239
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 ccgcccccgcccccgcgctc 332 |||||||||||||||||||| Sbjct: 2293242 ccgcccccgcccccgcgctc 2293223
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence Length = 378763 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 60167 gccgccgcccccgcccccgc 60186
>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence Length = 178233 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||| |||||||||||||||||| Sbjct: 119152 ctgcccccgcccccgcccccgcgc 119129
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 28622623 gccgccgcccccgcccccgc 28622642 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ggctgccgccgcccccgcccccgc 328 ||||| |||||||||||||||||| Sbjct: 14844172 ggctgacgccgcccccgcccccgc 14844149 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 11657312 gccgccgcccccgcccccgc 11657331
>ref|XM_848443.1| PREDICTED: Canis familiaris similar to glucocorticoid induced gene 1 (LOC610881), mRNA Length = 1568 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 507 gccgccgcccccgcccccgc 526
>gb|BC022542.1| Homo sapiens phosphatidylinositol glycan, class X, mRNA (cDNA clone MGC:26804 IMAGE:4797783), complete cds Length = 1906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccacggccttcaccgccgcg 144 |||||||||||||||||||| Sbjct: 199 ccacggccttcaccgccgcg 218
>ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomatosis polyposis coli 2 (LOC485084), mRNA Length = 7620 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgcgctc 332 ||||||||| |||||||||||||| Sbjct: 4737 gccgccgccgccgcccccgcgctc 4714
>ref|XM_542190.2| PREDICTED: Canis familiaris similar to Muellerian inhibiting factor precursor (MIS) (Anti-Muellerian hormone) (AMH) (Mullerian inhibiting substance) (LOC485072), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gccgcccccgcccccgcgct 331 |||||||||||||||||||| Sbjct: 869 gccgcccccgcccccgcgct 850
>emb|AJ849710.1| Ceratosolen bisulcatus microsatellite DNA, clone WCB3-61 Length = 490 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 274 gccgccgcccccgcccccgc 255
>ref|XM_849796.1| PREDICTED: Canis familiaris similar to HMG-box transcription factor TCF-3 (LOC612070), mRNA Length = 2313 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 420 gccgccgcccccgcccccgc 401
>gb|AY464467.1| Candida cylindracea lipase mRNA, partial cds Length = 1647 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gccgcccccaccgccaacctcgcc 222 ||||||||||||||||| |||||| Sbjct: 43 gccgcccccaccgccaagctcgcc 66
>emb|X67021.1|MCVMDBP Murine cytomegalovirus genes for major binding protein and ICP18.5 protein Length = 8238 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 6429 ctgccgccgcccccgccccc 6410
>gb|AC126038.4| Mus musculus BAC clone RP24-230C18 from chromosome 8, complete sequence Length = 196490 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 131310 gccgccgcccccgcccccgc 131291
>ref|XM_546938.2| PREDICTED: Canis familiaris similar to adaptor protein with pleckstrin homology and src homology 2 domains (LOC489820), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 250 gccgccgcccccgcccccgc 269
>ref|XM_855855.1| PREDICTED: Canis familiaris similar to Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14), transcript variant 4 (LOC489671), mRNA Length = 1553 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 1232 gccgccgcccccgcccccgc 1251
>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06, complete sequence Length = 135774 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 58154 gccgccgcccccgcccccgc 58135
>emb|X66006.1|CCLIP3 C.cylindracea LIP3 gene Length = 1855 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 gccgcccccaccgccaacctcgcc 222 ||||||||||||||||| |||||| Sbjct: 126 gccgcccccaccgccaagctcgcc 149
>emb|AL512343.21| Human DNA sequence from clone RP11-396C23 on chromosome 1 Contains the H3F3A gene for H3 histone, family 3A, a nove gene and four CpG islands, complete sequence Length = 105087 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 cgcccccgcccccgcgctcc 333 |||||||||||||||||||| Sbjct: 85326 cgcccccgcccccgcgctcc 85307
>emb|AL356285.9| Human DNA sequence from clone RP11-569O4 on chromosome 13 Contains the 5' end of the XPO4 gene for likely ortholog of mouse exportin 4, a CCR4-NOT transcription complex, subunit 4 (CNOT4) (NOT4, NOT4H, CLONE243) pseudogene, a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)(HNRNPA1) pseudogene, a pseudogene similar to part of peptidylprolyl isomerase A (cyclophilin A) (PPIA), a Laminin receptor 1 (67kD, ribosomal protein SA)(LAMR1)(LRP, p40, RPSA, 37LRP, LAMBR) pseudogene, the 3' end of the LATS2 gene for LATS, large tumor suppressor, homolog 2 (LATS (large tumor suppressor, Drosophila) homolog 2), two novel genes and three CpG islands, complete sequence Length = 183597 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ccggctgccgccgcccccgcccccgcgc 330 |||||||| |||||||||||||| |||| Sbjct: 58801 ccggctgcggccgcccccgccccagcgc 58774
>emb|AL158052.10| Human DNA sequence from clone RP11-570J20 on chromosome 9q33.1-34.12 Contains three novel genes, the 3' end of the LHX2 gene for LIM homeobox protein 2 and four CpG islands, complete sequence Length = 221887 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 18175 gccgccgcccccgcccccgc 18194
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 46407 gccgccgcccccgcccccgc 46426
>gb|AY673990.1| Canis familiaris Mullerian inhibiting substance (Mis) gene, exon 5 and partial cds Length = 689 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gccgcccccgcccccgcgct 331 |||||||||||||||||||| Sbjct: 227 gccgcccccgcccccgcgct 208
>emb|X69970.1|HSHRYK H.sapiens mRNA for h-ryk Length = 2563 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgcccc 325 |||||||||||||||||||| Sbjct: 220 gctgccgccgcccccgcccc 239
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgcgctc 332 |||||||||||||| ||||||||| Sbjct: 98784 gccgccgcccccgcgcccgcgctc 98761
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgcgctc 332 |||||||||||||| ||||||||| Sbjct: 277042 gccgccgcccccgcgcccgcgctc 277019
>gb|BC047511.1| Homo sapiens oligodendrocyte lineage transcription factor 2, mRNA (cDNA clone MGC:51023 IMAGE:5300879), complete cds Length = 2501 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 990 ctgccgccgcccccgccccc 971
>gb|BC036245.1| Homo sapiens oligodendrocyte lineage transcription factor 2, mRNA (cDNA clone MGC:39835 IMAGE:5303546), complete cds Length = 3275 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 1764 ctgccgccgcccccgccccc 1745
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgcgctc 332 ||||||||||||||| |||||||| Sbjct: 11582 gccgccgcccccgcctccgcgctc 11605
>dbj|AK091462.1| Homo sapiens cDNA FLJ34143 fis, clone FCBBF3011570, highly similar to PROTEIN KINASE C-BINDING PROTEIN RACK17 Length = 3259 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 1764 ctgccgccgcccccgccccc 1745
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 62320 gccgccgcccccgcccccgc 62339
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 67549 gccgccgcccccgcccccgc 67530
>emb|CR597514.1| full-length cDNA clone CS0DF037YG05 of Fetal brain of Homo sapiens (human) Length = 1759 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 39 gccgccgcccccgcccccgc 20
>dbj|AK142777.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930008M11 product:RIKEN cDNA A630025O09 gene, full insert sequence Length = 4585 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgccgcccccgcccccgcgc 330 |||||||||||||||||||| Sbjct: 20 cgccgcccccgcccccgcgc 1
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ggctgccgccgcccccgcccccgc 328 ||||| |||||||||||||||||| Sbjct: 88596 ggctgacgccgcccccgcccccgc 88619
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ggtcggcgtcaccgcctgcg 511 |||||||||||||||||||| Sbjct: 2814439 ggtcggcgtcaccgcctgcg 2814458
>dbj|AK143370.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330018H16 product:unclassifiable, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 877 gccgccgcccccgcccccgc 858
>dbj|AK032034.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330554B22 product:DJ846F13.1 (PHOSPHATIDIC ACID PHOSPHATASE TYPE 2C) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 2688 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||||||||||||||| |||||| Sbjct: 363 ctgccgccgcccccgccgccgcgc 386
>dbj|AK076176.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732405N23 product:DJ846F13.1 (PHOSPHATIDIC ACID PHOSPHATASE TYPE 2C) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 4046 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||||||||||||||| |||||| Sbjct: 127 ctgccgccgcccccgccgccgcgc 150
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ccgccgcccccgcccccgcg 329 |||||||||||||||||||| Sbjct: 12379 ccgccgcccccgcccccgcg 12398
>dbj|AK082692.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230088A04 product:DJ846F13.1 (PHOSPHATIDIC ACID PHOSPHATASE TYPE 2C) (FRAGMENT) homolog [Homo sapiens], full insert sequence Length = 3564 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||||||||||||||| |||||| Sbjct: 258 ctgccgccgcccccgccgccgcgc 281
>emb|CR353285.1| Gallus gallus finished cDNA, clone ChEST53k20 Length = 993 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ggctgccgccgcccccgcccccgc 328 ||||||||||||| |||||||||| Sbjct: 24 ggctgccgccgccgccgcccccgc 47
>gb|AF327876.1|AF327876 Chlamydomonas reinhardtii PF6 protein gene, promoter and complete cds Length = 11462 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 8026 gccgccgcccccgcccccgc 8045
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||| |||||||||||||||||| Sbjct: 18704772 ctgcccccgcccccgcccccgcgc 18704749
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 11604219 gccgccgcccccgcccccgc 11604200
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 18035862 gccgccgcccccgcccccgc 18035843
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 28713947 gccgccgcccccgcccccgc 28713966 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ggctgccgccgcccccgcccccgc 328 ||||| |||||||||||||||||| Sbjct: 14838706 ggctgacgccgcccccgcccccgc 14838683 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 11654075 gccgccgcccccgcccccgc 11654094
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 35808931 gccgccgcccccgcccccgc 35808912 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 27375361 gccgccgcccccgcccccgc 27375342 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 19749170 gccgccgcccccgcccccgc 19749151 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 5075217 gccgccgcccccgcccccgc 5075236
>gb|AC093628.3| Homo sapiens BAC clone RP11-98N20 from 4, complete sequence Length = 159991 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 43782 gccgccgcccccgcccccgc 43801
>gb|AC109826.4| Homo sapiens BAC clone RP11-764D5 from 2, complete sequence Length = 87746 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgccccgctccgggccgccc 205 |||||||||||||||||||| Sbjct: 24520 cgccccgctccgggccgccc 24539
>dbj|AP000041.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 12/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 49502 ctgccgccgcccccgccccc 49483
>gb|AC096967.18| Homo sapiens 3 BAC RP11-200A1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123251 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gctgccgccgcccccgcccc 325 |||||||||||||||||||| Sbjct: 51266 gctgccgccgcccccgcccc 51247
>gb|AF202732.1| Rattus norvegicus cAMP-specific phosphodiesterase isoform PDE4B1 (Pde4b) mRNA, complete cds Length = 3022 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgccgcccccgcccccgcgc 330 |||||||||||||||||||| Sbjct: 34 cgccgcccccgcccccgcgc 15
>gb|AF164438.1|AF164438 Homo sapiens basic-helix-loop-helix-PAS protein (MOP6) mRNA, complete cds Length = 3428 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2295 gccgccgcccccgcccccgc 2276
>gb|AF190427.1|AF190427 Colletotrichum lindemuthianum putative GAL4-like transcriptional activator (CLTA1) gene, complete cds Length = 4130 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2002 gccgccgcccccgcccccgc 2021
>emb|BX936113.1| Gallus gallus finished cDNA, clone ChEST485h7 Length = 948 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ggctgccgccgcccccgcccccgc 328 ||||||||||||| |||||||||| Sbjct: 1 ggctgccgccgccgccgcccccgc 24
>gb|AY205563.1| Chlamydomonas reinhardtii genomic sequence Length = 7479 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 4575 gccgccgcccccgcccccgc 4594
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 5136851 gccgccgcccccgcccccgc 5136832
>gb|AC090882.10| Oryza sativa chromosome 3 BAC OSJNBa0014G15 genomic sequence, complete sequence Length = 158839 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 76273 gccgccgcccccgcccccgc 76254
>gb|AC091492.2| Homo sapiens chromosome 3 clone RP11-335I9 map 3p, complete sequence Length = 180963 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 138031 gccgccgcccccgcccccgc 138050
>gb|AY157302.1| Homo sapiens neuronal PAS3 transcript variant 1 (NPAS3) mRNA, complete cds Length = 3404 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2284 gccgccgcccccgcccccgc 2265
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccgcccccacggccttcacc 138 |||||||||||||||||||| Sbjct: 1699780 ccgcccccacggccttcacc 1699799
>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0026C08 Length = 155316 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 28984 gccgccgcccccgcccccgc 28965
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 87516 gccgccgcccccgcccccgc 87497
>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1197_E09 Length = 67368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 21299 gccgccgcccccgcccccgc 21280
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 3121078 gccgccgcccccgcccccgc 3121097
>dbj|AP005413.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0055N24 Length = 142702 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 303 ccggctgccgccgcccccgcccccgcgc 330 ||||| ||||||||||||||| |||||| Sbjct: 103079 ccggccgccgccgcccccgccgccgcgc 103106
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 11775 gccgccgcccccgcccccgc 11794
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 50415 gccgccgcccccgcccccgc 50434
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 90294 gccgccgcccccgcccccgc 90275
>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G07 Length = 149119 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 57721 gccgccgcccccgcccccgc 57702
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 35715 gccgccgcccccgcccccgc 35734
>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1136H02 Length = 145086 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 105928 gccgccgcccccgcccccgc 105909
>gb|AF221520.1|AF221520 Homo sapiens basic helix-loop-helix protein class B 1 (BHLHB1) mRNA, partial cds Length = 2435 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 940 ctgccgccgcccccgccccc 921
>emb|AL954213.1| Pan troglodytes chromosome 22 clone RP43-040C07 map 22q22.11, complete sequence Length = 156234 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 31802 ctgccgccgcccccgccccc 31783
>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete sequence Length = 192328 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 185268 ctgccgccgcccccgccccc 185249
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 79646 gccgccgcccccgcccccgc 79627
>dbj|AK121067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061B11, full insert sequence Length = 725 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 334 gccgccgcccccgcccccgc 353
>dbj|AK121149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H05, full insert sequence Length = 3565 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 109 gccgccgcccccgcccccgc 128
>dbj|AK120919.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035A16, full insert sequence Length = 2633 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 278 gccgccgcccccgcccccgc 259
>dbj|AK119852.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-F10, full insert sequence Length = 3552 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 306 gctgccgccgcccccgcccccgcg 329 ||||||||||| |||||||||||| Sbjct: 2397 gctgccgccgctcccgcccccgcg 2420
>dbj|AK120193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035P19, full insert sequence Length = 2499 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 138 gccgccgcccccgcccccgc 157
>dbj|AK111881.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050A01, full insert sequence Length = 1125 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 112 gccgccgcccccgcccccgc 131
>gb|AC006450.13|AC006450 Homo sapiens chromosome 9, clone RP11-85O21, complete sequence Length = 177555 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 33096 gccgccgcccccgcccccgc 33077
>dbj|AK107823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-G03, full insert sequence Length = 880 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 108 gccgccgcccccgcccccgc 127
>emb|AJ337954.1|HSA337954 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CK22R Length = 788 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 35 ctgccgccgcccccgccccc 16
>dbj|AK101845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069I15, full insert sequence Length = 1496 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 98 gccgccgcccccgcccccgc 117
>dbj|AK067425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C17, full insert sequence Length = 2359 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ccggctgccgccgcccccgcccccgcgc 330 ||||| ||||||||||||||| |||||| Sbjct: 133 ccggccgccgccgcccccgccgccgcgc 106
>dbj|AK064760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-H01, full insert sequence Length = 989 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 ggctgccgccgcccccgcccccgc 328 ||||| |||||||||||||||||| Sbjct: 94 ggctgacgccgcccccgcccccgc 71
>dbj|AK064365.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-C02, full insert sequence Length = 1546 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 146 gccgccgcccccgcccccgc 165
>emb|AL157689.3|CNS01RG1 Human chromosome 14 DNA sequence BAC R-1075M22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216457 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 91234 gccgccgcccccgcccccgc 91215
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgcgctc 332 ||||||||||||||| |||||||| Sbjct: 2643 gccgccgcccccgcctccgcgctc 2666
>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 314652 ctgccgccgcccccgccccc 314633
>gb|U48250.1|HSU48250 Human protein kinase C-binding protein RACK17 mRNA, partial cds Length = 2085 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 870 ctgccgccgcccccgccccc 851
>gb|AC005943.1|AC005943 Homo sapiens chromosome 19, cosmid R30538, complete sequence Length = 42301 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 8638 gccgccgcccccgcccccgc 8657
>dbj|AB053222.1| Homo sapiens gene for N-acetylglucosaminyltransferase IVa, partial cds Length = 12562 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cgccccgctccgggccgccc 205 |||||||||||||||||||| Sbjct: 5101 cgccccgctccgggccgccc 5082
>dbj|AB055962.1| Homo sapiens NPAS3 mRNA, complete cds Length = 2802 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2316 gccgccgcccccgcccccgc 2297
>dbj|AB054576.1| Homo sapiens NPAS3v mRNA for NPAS3 variant, complete cds Length = 2763 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2277 gccgccgcccccgcccccgc 2258
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 86786 ctgccgccgcccccgccccc 86805
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgccccgctccgggccgccc 205 |||||||||||||||||||| Sbjct: 3258325 cgccccgctccgggccgccc 3258344
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 11610659 gccgccgcccccgcccccgc 11610640
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||| |||||||||||||||||| Sbjct: 18864173 ctgcccccgcccccgcccccgcgc 18864150
>emb|AL807387.10| Mouse DNA sequence from clone RP23-24J10 on chromosome 4, complete sequence Length = 241148 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 108738 gccgccgcccccgcccccgc 108757
>emb|AJ010303.1|SHK010303 Suid herpesvirus 1 putative UL47 and UL46 genes and partial gB gene, strain Kaplan Length = 5317 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ccgccgcccccgcccccgcg 329 |||||||||||||||||||| Sbjct: 814 ccgccgcccccgcccccgcg 833
>emb|BX295537.1| Platypus DNA sequence from clone XX-200B24, complete sequence Length = 137155 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 gccgcccccgcccccgcgct 331 |||||||||||||||||||| Sbjct: 15144 gccgcccccgcccccgcgct 15125
>gb|AC147247.5| Mus musculus BAC clone RP23-468K14 from 8, complete sequence Length = 184377 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 124246 gccgccgcccccgcccccgc 124265
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccgcccccacggccttcacc 138 |||||||||||||||||||| Sbjct: 1388013 ccgcccccacggccttcacc 1388032
>gb|BC031879.1| Mus musculus RIKEN cDNA 4833424O15 gene, mRNA (cDNA clone MGC:30408 IMAGE:4527789), complete cds Length = 2555 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 307 ctgccgccgcccccgcccccgcgc 330 ||||||||||||||||| |||||| Sbjct: 227 ctgccgccgcccccgccgccgcgc 250
>ref|NM_213964.1| Sus scrofa huntingtin (HDH), mRNA Length = 12709 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 295 gccgccgcccccgcccccgc 314
>gb|AC144455.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0086G17, complete sequence Length = 134631 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 104613 gccgccgcccccgcccccgc 104594
>gb|AC093174.2| Homo sapiens chromosome 3 clone RP11-167M22 map 3p, complete sequence Length = 135675 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 18013 gccgccgcccccgcccccgc 18032
>gb|M90413.1|STMHRDD Streptomyces aureofaciens principal sigma- like factor (hrdD) gene, complete cds Length = 1998 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 1743 gccgccgcccccgcccccgc 1762
>dbj|AP000287.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:Q77A10, complete sequence Length = 22275 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 2267 ctgccgccgcccccgccccc 2248
>dbj|AP000185.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 12/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 55478 ctgccgccgcccccgccccc 55459
>dbj|AB054575.1| Homo sapiens mRNA for NPAS3 (MOP6), complete cds Length = 2926 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 2271 gccgccgcccccgcccccgc 2252
>dbj|AB016793.1| Sus scrofa mRNA for huntingtin, complete cds Length = 12749 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gccgccgcccccgcccccgc 328 |||||||||||||||||||| Sbjct: 295 gccgccgcccccgcccccgc 314
>dbj|AP000109.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 12/20 Length = 100000 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctgccgccgcccccgccccc 326 |||||||||||||||||||| Sbjct: 55478 ctgccgccgcccccgccccc 55459 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,698,753 Number of Sequences: 3902068 Number of extensions: 2698753 Number of successful extensions: 84364 Number of sequences better than 10.0: 187 Number of HSP's better than 10.0 without gapping: 198 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80743 Number of HSP's gapped (non-prelim): 3612 length of query: 552 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 529 effective length of database: 17,143,297,704 effective search space: 9068804485416 effective search space used: 9068804485416 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
