>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
 Frame = +3

Query: 375 GETTKMVESLSRDTWQHFKTGPSFTEAAMGRL----AQGTKVLAEGGYEKIFKQTFEILP 542
           G   K V+  S+  W   K   SFT   +G+      QGTK+ +EG   ++F+ +   L 
Sbjct: 14  GGKKKAVDPFSKKDWYDVKAPGSFTNRNVGKTLVSRTQGTKIASEGLKHRVFEVSLADLQ 73

Query: 543 DEQ 551
           +++
Sbjct: 74  NDE 76

>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +3

Query: 375 GETTKMVESLSRDTWQHFKTGPSFTEAAMGRL----AQGTKVLAEGGYEKIFK 521
           G   K+V+  ++  W   K   SFT   +G+      QGTK+ +EG   ++F+
Sbjct: 14  GGKKKIVDPFAKKDWYDIKAPSSFTHRNVGKTLVSRTQGTKIASEGLKHRVFE 66

>LEXA2_NOCFA (Q5YT43) LexA repressor 2 (EC 3.4.21.88)|
          Length = 243

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/84 (27%), Positives = 38/84 (45%)
 Frame = +3

Query: 303 PASSSSKGAVEAMKDTLSRWGKSMGETTKMVESLSRDTWQHFKTGPSFTEAAMGRLAQGT 482
           P +   +G  EA++   +  G ++ E   + E   R T       P+F    +GR+A G 
Sbjct: 83  PRAVDVRGLDEAVRAVTALPGAALEEPDTLAEDTGRPT-------PTFVPV-LGRIAAGG 134

Query: 483 KVLAEGGYEKIFKQTFEILPDEQL 554
            +LAE   E +F    E++ D  L
Sbjct: 135 PILAEQAVEDVFPLPRELVGDGSL 158

>HIS4_CARHZ (Q3AD49) 1-(5-phosphoribosyl)-5-[(5-|
           phosphoribosylamino)methylideneamino]
           imidazole-4-carboxamide isomerase (EC 5.3.1.16)
           (Phosphoribosylformimino-5-aminoimidazole carboxamide
           ribotide isomerase)
          Length = 243

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 366 KSMGETTKMVESLSRDTWQHFKTGPSFTEAAMGRLAQGTKVLAEGG 503
           K MG TT +   ++RD      TGP+F E     +  G KV+A GG
Sbjct: 156 KEMGVTTIIYTDIARDG---SLTGPNFNETLKLAIDTGLKVIASGG 198

>KGUA_MYCLE (Q9CCQ7) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 210

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 338 DEGHALQVGEVHGGDHQDGREPQPRHVAA 424
           D+G  L+  E+HGG H+ G   +P  VAA
Sbjct: 84  DQGALLEWAEIHGGMHRSGTLAEPVRVAA 112

>PRY1_YEAST (P47032) Protein PRY1 precursor (Pathogen related in Sc 1)|
          Length = 299

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +3

Query: 207 KTVTWSEKLTSESPTHVPXXXXXXXSQYVSRGPASSSSKGAVEAMKDTLSRWGKSMGETT 386
           +T T  E L   S            +  V+   ASS+S   + A+K+  S WGK+   TT
Sbjct: 48  QTRTTYETLAPASTATPTSTATALVAPPVAPSSASSNSDVVLSALKNLASVWGKTTDSTT 107

Query: 387 KMVESLS 407
            +  S S
Sbjct: 108 TLTSSES 114

>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)|
          Length = 1285

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +3

Query: 246  PTHVPXXXXXXXSQYVSRGPASSSSKGAVEAMKDTLSRW 362
            P   P       S+++SRGPA  ++K A    K  LS+W
Sbjct: 1042 PKMTPEQMAKEMSEFLSRGPAVLATKAAAGTKKYDLSKW 1080

>KGUA_MYCTU (P0A5I4) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 208

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 338 DEGHALQVGEVHGGDHQDGREPQPRHVAA 424
           D+G  L+  E+HGG H+ G   QP   AA
Sbjct: 82  DQGELLEWAEIHGGLHRSGTLAQPVRAAA 110

>KGUA_MYCBO (P0A5I5) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 208

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 338 DEGHALQVGEVHGGDHQDGREPQPRHVAA 424
           D+G  L+  E+HGG H+ G   QP   AA
Sbjct: 82  DQGELLEWAEIHGGLHRSGTLAQPVRAAA 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,801,387
Number of Sequences: 219361
Number of extensions: 649219
Number of successful extensions: 2376
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2375
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)