ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23d03 |
|---|---|
| Clone Library Name | barley_pub |
>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 308 Score = 341 bits (874), Expect = 1e-93 Identities = 172/194 (88%), Positives = 177/194 (91%), Gaps = 1/194 (0%) Frame = +2 Query: 35 MERLQRIFGAGG-MGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 211 MERLQRIFGAGG +G EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF Sbjct: 1 MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 60 Query: 212 VDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 391 VD+YTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW Sbjct: 61 VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 120 Query: 392 LSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNV 571 LSGVDINTQQSFEALN RAVAVV+DPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSN+ Sbjct: 121 LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL 180 Query: 572 GHLK*PSIQALIHG 613 GHL PSIQALIHG Sbjct: 181 GHLNKPSIQALIHG 194
>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome regulatory complex subunit p37B) (Yippee-interacting protein 5) Length = 308 Score = 311 bits (798), Expect = 7e-85 Identities = 156/193 (80%), Positives = 168/193 (87%) Frame = +2 Query: 35 MERLQRIFGAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV 214 M+RL R+ GA EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV Sbjct: 1 MDRLLRLGGAMPQAAPPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV 60 Query: 215 DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWL 394 DDYTV+V+DVFAMPQ+GTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGCWL Sbjct: 61 DDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWL 120 Query: 395 SGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVG 574 SGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFRLINP ++LGQEPRQTTSN+G Sbjct: 121 SGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLG 180 Query: 575 HLK*PSIQALIHG 613 HL+ PS+QALIHG Sbjct: 181 HLQKPSVQALIHG 193
>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 312 Score = 310 bits (795), Expect = 2e-84 Identities = 159/197 (80%), Positives = 166/197 (84%), Gaps = 4/197 (2%) Frame = +2 Query: 35 MERLQRIFGAGG----MGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLML 202 MER R+ G GG G E VYISSLALLKMLKHGRAGVPMEVMGLML Sbjct: 1 MERFLRLGGLGGNLGTFGANPQDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLML 60 Query: 203 GEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGF 382 GEFVDDYTV V+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGF Sbjct: 61 GEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGF 120 Query: 383 GCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTT 562 GCWLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFR INPQ+M L QEPRQTT Sbjct: 121 GCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTT 180 Query: 563 SNVGHLK*PSIQALIHG 613 SN+GHL+ PSIQALIHG Sbjct: 181 SNLGHLQKPSIQALIHG 197
>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (MAD1) Length = 310 Score = 309 bits (792), Expect = 4e-84 Identities = 160/195 (82%), Positives = 168/195 (86%), Gaps = 2/195 (1%) Frame = +2 Query: 35 MERLQRIFGA-GGMGQXXXXXX-XXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 208 M+RL R+ G G+GQ EQVYISSLALLKMLKHGRAGVPMEVMGLMLGE Sbjct: 1 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60 Query: 209 FVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 388 FVDDYTVRV+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGC Sbjct: 61 FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC 120 Query: 389 WLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 568 WLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN M+LG EPRQTTSN Sbjct: 121 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSN 180 Query: 569 VGHLK*PSIQALIHG 613 +GHL PSIQALIHG Sbjct: 181 LGHLNKPSIQALIHG 195
>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome-associated PAD1 homolog 1) Length = 310 Score = 309 bits (792), Expect = 4e-84 Identities = 160/195 (82%), Positives = 168/195 (86%), Gaps = 2/195 (1%) Frame = +2 Query: 35 MERLQRIFGA-GGMGQXXXXXX-XXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 208 M+RL R+ G G+GQ EQVYISSLALLKMLKHGRAGVPMEVMGLMLGE Sbjct: 1 MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60 Query: 209 FVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 388 FVDDYTVRV+DVFAMPQSGTGVSVEAVD VFQ MLDMLKQTGRPEMVVGWYHSHPGFGC Sbjct: 61 FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC 120 Query: 389 WLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 568 WLSGVDINTQQSFEAL+ RAVAVV+DPIQSVKGKVVIDAFRLIN M+LG EPRQTTSN Sbjct: 121 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSN 180 Query: 569 VGHLK*PSIQALIHG 613 +GHL PSIQALIHG Sbjct: 181 LGHLNKPSIQALIHG 195
>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)| Length = 308 Score = 306 bits (783), Expect = 4e-83 Identities = 155/194 (79%), Positives = 164/194 (84%), Gaps = 1/194 (0%) Frame = +2 Query: 35 MERLQRIFGAGGMGQXXXXXX-XXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 211 ME LQR+ MG E VYISSLALLKML+HGR G PMEVMGLMLGEF Sbjct: 1 MESLQRLLQGARMGTGMMGDQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMGLMLGEF 60 Query: 212 VDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 391 VDD+TVRVVDVFAMPQSGTGVSVEAVD VFQ NM+DMLKQTGRPEMVVGWYHSHPGFGCW Sbjct: 61 VDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCW 120 Query: 392 LSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNV 571 LS VDINTQQSFE L PRAVAVV+DPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSN+ Sbjct: 121 LSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSNL 180 Query: 572 GHLK*PSIQALIHG 613 GH+ PSIQALIHG Sbjct: 181 GHINKPSIQALIHG 194
>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11| Length = 311 Score = 283 bits (723), Expect = 4e-76 Identities = 144/196 (73%), Positives = 161/196 (82%), Gaps = 3/196 (1%) Frame = +2 Query: 35 MERLQRIF---GAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLG 205 M+RLQR+ + +G E VYISSLALLKMLKH RAGVPMEVMGLMLG Sbjct: 1 MDRLQRLMMSQRSNMIGAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLG 60 Query: 206 EFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFG 385 +FVD+YTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFG Sbjct: 61 DFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFG 120 Query: 386 CWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTS 565 CWLS VD++TQ+SFE LN RAVAVV+DPIQSVKGKVVIDAFRLI+P T++ QEPRQTTS Sbjct: 121 CWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVVRNQEPRQTTS 180 Query: 566 NVGHLK*PSIQALIHG 613 NVG L P+IQ+LIHG Sbjct: 181 NVGLLNKPNIQSLIHG 196
>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)| Length = 306 Score = 279 bits (713), Expect = 5e-75 Identities = 144/193 (74%), Positives = 156/193 (80%) Frame = +2 Query: 35 MERLQRIFGAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV 214 MERLQR+ +G E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFV Sbjct: 1 MERLQRLMMNSKVGSADTGRDDTK--ETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFV 58 Query: 215 DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWL 394 DDYTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWL Sbjct: 59 DDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWL 118 Query: 395 SGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVG 574 S VD+NTQ+SFE LN RAVAVV+DPIQSVKGKVVIDAFRLI+ ++ EPRQTTSN G Sbjct: 119 SSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTG 178 Query: 575 HLK*PSIQALIHG 613 L +IQALIHG Sbjct: 179 LLNKANIQALIHG 191
>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11| Length = 306 Score = 277 bits (709), Expect = 2e-74 Identities = 143/193 (74%), Positives = 157/193 (81%) Frame = +2 Query: 35 MERLQRIFGAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV 214 MERLQR+ +G E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFV Sbjct: 1 MERLQRLMMNTKVG--AADANKDDTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFV 58 Query: 215 DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWL 394 D+YTV VVDVFAMPQSGTGVSVEAVD VFQ M+DMLKQTGR +MVVGWYHSHPGFGCWL Sbjct: 59 DEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWL 118 Query: 395 SGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNVG 574 S VD+NTQ+SFE LN RAVAVV+DPIQSVKGKVVIDAFRLI+ ++ QEPRQTTSN G Sbjct: 119 SSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNQEPRQTTSNSG 178 Query: 575 HLK*PSIQALIHG 613 + +IQALIHG Sbjct: 179 LMNKANIQALIHG 191
>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III| Length = 319 Score = 251 bits (640), Expect = 2e-66 Identities = 125/198 (63%), Positives = 150/198 (75%), Gaps = 5/198 (2%) Frame = +2 Query: 35 MERLQRIFGAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFV 214 M+RL R Q E V ISSLALLKML+H R+G+P+EVMGLMLG+FV Sbjct: 1 MDRLIRSLLMNQNKQATDKLDHPDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFV 60 Query: 215 DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWL 394 DDYT+ V DVFAMPQSGT V+VE+VD V+QT +D+LK GR E VVGWYHSHPGFGCWL Sbjct: 61 DDYTINVTDVFAMPQSGTSVTVESVDPVYQTKHMDLLKLVGRTENVVGWYHSHPGFGCWL 120 Query: 395 SGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMML-----GQEPRQT 559 S VD+NTQQSFEAL+PRAVAVV+DPIQSVKGKV++DAFR +NP + + EPRQT Sbjct: 121 SSVDVNTQQSFEALHPRAVAVVVDPIQSVKGKVMLDAFRSVNPLNLQIRPLAPTAEPRQT 180 Query: 560 TSNVGHLK*PSIQALIHG 613 TSN+GHL PS+ +++HG Sbjct: 181 TSNLGHLTKPSLISVVHG 198
>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (Dch5) (JAB1 homolog) Length = 327 Score = 131 bits (329), Expect = 2e-30 Identities = 66/136 (48%), Positives = 95/136 (69%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEA 286 + + IS+LALLKM+ H R+G +EVMGLMLG+ V+D T+ V+D FA+P GT V+ +A Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGK-VEDNTMIVMDAFALPVEGTETRVNAQA 108 Query: 287 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 + + T ++ K+ GR E VGWYHSHPG+GCWLSG+D++TQ + VA+V+D Sbjct: 109 QAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVD 168 Query: 467 PIQSVK-GKVVIDAFR 511 P+++V GKV + AFR Sbjct: 169 PVRTVSAGKVCLGAFR 184
>CSN5_USTMA (Q4P804) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 406 Score = 126 bits (317), Expect = 4e-29 Identities = 66/137 (48%), Positives = 94/137 (68%), Gaps = 4/137 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF-VDDYTVRVVDVFAMPQSGTGVSVEAV 289 ++V IS++AL+KM+ H R+G E+MGLM G+ V++ T+ V+D FA+P GT V A Sbjct: 59 QKVRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQ 118 Query: 290 DHVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 463 + ++ LD K+ GR E VVGWYHSHPG+GCWLSG+D+NTQ++ + VA+VI Sbjct: 119 NEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVI 178 Query: 464 DPIQSV-KGKVVIDAFR 511 DP +++ GKV I AFR Sbjct: 179 DPNRTISSGKVDIGAFR 195
>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) (Kip1 C-terminus-interacting protein 2) Length = 333 Score = 124 bits (312), Expect = 2e-28 Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +2 Query: 125 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 298 IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 56 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 114 Query: 299 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 478 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 115 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 174 Query: 479 VK-GKVVIDAFR 511 + GKV + AFR Sbjct: 175 ISAGKVNLGAFR 186
>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) Length = 333 Score = 124 bits (312), Expect = 2e-28 Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +2 Query: 125 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 298 IS+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 56 ISALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 114 Query: 299 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 478 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 115 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 174 Query: 479 VK-GKVVIDAFR 511 + GKV + AFR Sbjct: 175 ISAGKVNLGAFR 186
>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 124 bits (311), Expect = 2e-28 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +2 Query: 125 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 298 +S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 57 VSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 115 Query: 299 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 478 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 116 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175 Query: 479 VK-GKVVIDAFR 511 + GKV + AFR Sbjct: 176 ISAGKVNLGAFR 187
>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 332 Score = 124 bits (311), Expect = 2e-28 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +2 Query: 125 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 298 +S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 55 VSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113 Query: 299 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 478 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173 Query: 479 VK-GKVVIDAFR 511 + GKV + AFR Sbjct: 174 ISAGKVNLGAFR 185
>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 124 bits (310), Expect = 3e-28 Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 3/132 (2%) Frame = +2 Query: 125 ISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEAVDHV 298 +S+LALLKM+ H R+G +EVMGLMLG+ VD T+ ++D FA+P GT V+ +A + Sbjct: 55 LSALALLKMVMHARSGGNLEVMGLMLGK-VDGETMIIMDSFALPVEGTETRVNAQAAAYE 113 Query: 299 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 478 + ++ KQ GR E +GWYHSHPG+GCWLSG+D++TQ + VAVVIDP ++ Sbjct: 114 YMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173 Query: 479 VK-GKVVIDAFR 511 + GKV + AFR Sbjct: 174 ISAGKVNLGAFR 185
>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 469 Score = 122 bits (305), Expect = 1e-27 Identities = 62/136 (45%), Positives = 92/136 (67%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEA 286 ++ YISSLAL KM H ++G +EVMG+M G+ + + ++ V+DV+ +P GT V+ +A Sbjct: 61 KKTYISSLALCKMSVHAKSGGAIEVMGMMTGKIIKN-SIIVMDVYPLPVEGTETRVNAQA 119 Query: 287 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 + + L+ LKQ GR E +VGWYHSHPG+GCWLSG+D+ TQ + +A+VID Sbjct: 120 EGYEYMVQYLENLKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVID 179 Query: 467 PIQSV-KGKVVIDAFR 511 P+++ +GKV I AFR Sbjct: 180 PMKTEDQGKVEIGAFR 195
>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)| (Signalosome subunit 5a) (Jun activation domain-binding homolog 2) Length = 358 Score = 121 bits (303), Expect = 2e-27 Identities = 67/136 (49%), Positives = 89/136 (65%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 ++V IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A D Sbjct: 57 KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 115 Query: 293 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 ++ K GR E VVGWYHSHPG+GCWLSG+D++TQ+ + +AVVID Sbjct: 116 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 175 Query: 467 PIQSVK-GKVVIDAFR 511 P ++V GKV I AFR Sbjct: 176 PTRTVSAGKVEIGAFR 191
>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)| (Signalosome subunit 5b) (Jun activation domain-binding homolog 1) Length = 357 Score = 120 bits (302), Expect = 2e-27 Identities = 66/136 (48%), Positives = 88/136 (64%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 ++V+IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGD-TIIVMDAFALPVEGTETRVNAQS 115 Query: 293 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 ++ K GR E VVGWYHSHPG+GCWLSG+D++TQ + +AVVID Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175 Query: 467 PIQSVK-GKVVIDAFR 511 P ++V GKV I AFR Sbjct: 176 PTRTVSAGKVEIGAFR 191
>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (JAB1 homolog) Length = 368 Score = 119 bits (297), Expect = 9e-27 Identities = 62/136 (45%), Positives = 90/136 (66%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTG--VSVEA 286 +Q+ IS++ALLKM H + G +E+MGL+ G +D + ++DVFA+P GT V+ +A Sbjct: 54 KQIKISAIALLKMTMHAKRGGNLEIMGLLQGR-IDANSFIILDVFALPVEGTETRVNAQA 112 Query: 287 VDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 + + T +M GR E VVGWYHSHPG+GCWLSG+D++TQ + VA+VID Sbjct: 113 QAYEYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVID 172 Query: 467 PIQSVK-GKVVIDAFR 511 P++++ GKV I AFR Sbjct: 173 PLRTMSAGKVDIGAFR 188
>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 336 Score = 117 bits (294), Expect = 2e-26 Identities = 61/136 (44%), Positives = 87/136 (63%), Gaps = 3/136 (2%) Frame = +2 Query: 119 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 298 V ISS+A++KM+ H R+G +EVMG+M G +++ T+ + D + +P GT V A D Sbjct: 44 VRISSVAMIKMVMHARSGGNLEVMGMMQG-YIEGSTMVITDAYRLPVEGTETRVNAQDEA 102 Query: 299 --FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 + L + ++ R E V+GWYHSHPG+GCWLSG+D+ TQ + N VAVVIDP Sbjct: 103 NEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPD 162 Query: 473 QSV-KGKVVIDAFRLI 517 ++V + KV I AFR I Sbjct: 163 RTVSQNKVEIGAFRTI 178
>CSN5_EMENI (Q5BBF1) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 335 Score = 117 bits (292), Expect = 3e-26 Identities = 65/136 (47%), Positives = 86/136 (63%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 + V IS++ALLKM+ H R+G +EVMGLM G + + T V D F +P GT V A D Sbjct: 49 KSVRISAVALLKMVMHARSGGSLEVMGLMQGYILPN-TFVVTDAFRLPVEGTETRVNAQD 107 Query: 293 HV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 + + L ++ GR E VGWYHSHPG+GCWLSG+D++TQ + P VAVVID Sbjct: 108 EANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVID 166 Query: 467 PIQSVK-GKVVIDAFR 511 P +++ GKV I AFR Sbjct: 167 PERTISAGKVDIGAFR 182
>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 340 Score = 115 bits (288), Expect = 1e-25 Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 + V IS+ AL+KM H R+G +EVMGLM G D T V D F +P GT V A D Sbjct: 50 KHVRISATALIKMTMHARSGGNLEVMGLMQGYTQGD-TFIVTDAFRLPVEGTETRVNAQD 108 Query: 293 HV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 + LD+ + GR E VVGWYHSHPG+GCWLSG+D++T+ + +AVVID Sbjct: 109 EANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVID 168 Query: 467 PIQSV-KGKVVIDAFR 511 P +++ GKV I AFR Sbjct: 169 PDRTINSGKVDIGAFR 184
>CSN5_YARLI (Q6C703) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 354 Score = 115 bits (288), Expect = 1e-25 Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 3/134 (2%) Frame = +2 Query: 119 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDH- 295 V +SS+AL+KM H R+G +EVMG+M G+ + + T V+D + +P GT V A Sbjct: 56 VLVSSIALVKMAMHARSGGAIEVMGMMTGKILPN-TFVVMDCYPLPVEGTETRVNAQQEG 114 Query: 296 -VFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 F L LK GR E +VGWYHSHPG+GCWLSG+D++TQ + +AVV+DP Sbjct: 115 IEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPN 174 Query: 473 QSVK-GKVVIDAFR 511 +++ GKV I AFR Sbjct: 175 RTISAGKVEIGAFR 188
>CSN5_CRYNE (Q5KAB0) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 371 Score = 115 bits (287), Expect = 1e-25 Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 3/134 (2%) Frame = +2 Query: 119 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 298 V IS++AL+KM+ H R+G E+MG+M G+ V D T ++DV A+P GT V A + Sbjct: 51 VKISAVALIKMVTHARSGGIYEIMGIMYGK-VRDGTFWIMDVAALPVQGTETRVNAGNEA 109 Query: 299 --FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 + N + G+ E++ GWYHSHPG+GCWLSG+D+NTQ + + N +AVVIDP Sbjct: 110 MEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPN 169 Query: 473 QSVK-GKVVIDAFR 511 ++V GKV I AFR Sbjct: 170 RTVSAGKVEIGAFR 183
>CSN5_ASPFU (Q4WZP2) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 334 Score = 112 bits (280), Expect = 9e-25 Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 3/136 (2%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 + + IS++AL+KM H R+G +EVMGLM G + + T V D F +P GT V A + Sbjct: 49 KSIRISAVALIKMTMHARSGGSLEVMGLMQGYILPE-TFVVTDAFRLPVEGTETRVNAQE 107 Query: 293 HV--FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 + + L + GR E VGWYHSHPG+GCWLSG+D+ T Q + L VAVVID Sbjct: 108 EANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTT-QDMQQLGGPFVAVVID 166 Query: 467 PIQSVK-GKVVIDAFR 511 P +++ GKV I AFR Sbjct: 167 PERTISAGKVDIGAFR 182
>CSN5_CANAL (Q59PG6) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 213 Score = 108 bits (269), Expect = 2e-23 Identities = 54/140 (38%), Positives = 90/140 (64%), Gaps = 7/140 (5%) Frame = +2 Query: 122 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVF 301 YISSLAL+KM H + G +E+MG+++G+ + +++ V+D + +P GT V A + + Sbjct: 76 YISSLALMKMCTHAQTGGSIEIMGMLVGK-ISGHSIIVMDTYRLPVEGTETRVNAQNEAY 134 Query: 302 QTNMLDMLKQTGR------PEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVI 463 T M++ L + + E +VGWYH HP +GCWL G+D++TQ + L +A+V+ Sbjct: 135 -TYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVV 193 Query: 464 DPIQSVK-GKVVIDAFRLIN 520 DP++++K GKV I AFR ++ Sbjct: 194 DPVKTLKQGKVEIGAFRNVS 213
>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 299 Score = 107 bits (268), Expect = 2e-23 Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 3/134 (2%) Frame = +2 Query: 119 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 298 V IS++ALLKML+H G+P+EVMG + G+ V+ ++ ++D FA+P GT V A + Sbjct: 35 VKISAVALLKMLRHVSQGMPLEVMGYVQGK-VEGASLIILDSFALPVEGTETRVNAHEEA 93 Query: 299 --FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 + + K R E V+GWYHSHP +GCWLSGVD+ TQ+ + VAVV+DP Sbjct: 94 QEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPK 153 Query: 473 QSVKGKVV-IDAFR 511 +S++ V I AFR Sbjct: 154 RSLESPYVNIGAFR 167
>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 420 Score = 99.4 bits (246), Expect = 8e-21 Identities = 57/158 (36%), Positives = 86/158 (54%), Gaps = 3/158 (1%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 ++ +S+LA +K+L+H G MEV+G++LG +V D + VVD + +P GT V A Sbjct: 71 QKAALSALACMKILRHAFDGGDMEVLGMLLG-YVQDEMIVVVDSYRLPVEGTETRVNAQM 129 Query: 293 HVFQTNMLDMLKQTGRPE--MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVID 466 ++ + + +T PE +VGWYHSHPG+GCWLSG+D TQ + +A+V+D Sbjct: 130 ESYEYTVQYL--ETAVPEGLAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVD 187 Query: 467 PIQS-VKGKVVIDAFRLINPQTMMLGQEPRQTTSNVGH 577 P +S G + I AFR + S GH Sbjct: 188 PKRSKASGVIDIGAFRTMPETADTRSVSSHSNASRYGH 225
>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 373 Score = 93.6 bits (231), Expect = 4e-19 Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 1/136 (0%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVD 292 ++ IS LA KML H G +EVMG+++G +D V V D +++P GT V A Sbjct: 64 QKCLISRLATTKMLSHAVDGGDIEVMGMLVGYTSNDMIV-VKDCYSLPVQGTETRVNAHM 122 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 ++ + + + + +VGWYHSHPG+GCWLS +DI TQ + +A+V+DP Sbjct: 123 ESYEYMVQYLDAFVTKEDKIVGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDPK 182 Query: 473 QSVKGKVV-IDAFRLI 517 +S+ G + I AFR + Sbjct: 183 KSLSGNTLDIGAFRTL 198
>CSN5_YEAST (Q12468) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 455 Score = 83.6 bits (205), Expect = 4e-16 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 13/150 (8%) Frame = +2 Query: 119 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEA---- 286 V IS L+ K+ + G +E+MG+++G + D V V+D F +P GT V A Sbjct: 86 VLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIV-VMDCFNLPVVGTETRVNAQLES 144 Query: 287 -------VDHVFQTNML-DMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNP 442 +D ++ N D G VVGW+HSHPG+ CWLS +DI TQ + Sbjct: 145 YEYMVQYIDEMYNHNDGGDGRDYKGAKLNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQD 204 Query: 443 RAVAVVIDPIQSVKGKVV-IDAFRLINPQT 529 VA+V+DP++S++ K++ + AFR I ++ Sbjct: 205 PYVAIVVDPLKSLEDKILRMGAFRTIESKS 234
>CSN5_CANGA (Q6FT36) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 465 Score = 82.0 bits (201), Expect = 1e-15 Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 8/146 (5%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSV---- 280 + V +S LA K+L H G +EVMG++LG + + T + D F +P GT V Sbjct: 72 QNVLLSKLACSKILCHATKGGNIEVMGMLLGNVIGN-TFVIFDCFELPVEGTETMVNAHM 130 Query: 281 EAVDHVFQTNMLDMLKQTGRPEM---VVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAV 451 E+ +++ Q + + R E ++GWYHSHPG+ CWLS +D+ TQ + + Sbjct: 131 ESYEYMVQFYHEMVERSYTRNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYL 190 Query: 452 AVVIDPIQSVKG-KVVIDAFRLINPQ 526 A+V+DP +S KV I +FR Q Sbjct: 191 AIVVDPHKSKNDQKVRIGSFRTYQDQ 216
>BRCC3_MOUSE (P46737) BRCA1/BRCA2-containing complex subunit 3| Length = 291 Score = 61.6 bits (148), Expect = 2e-09 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 33/171 (19%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDY---------------------TV 229 + V++ S A L L H + EVMGL +GE DD T+ Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDIRSDSKFTYTGTEMRTVQEKMDTI 69 Query: 230 RVVDVFAM--------PQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFG 385 R+V + ++ + +S E + T + + TGRP VVGWYHSHP Sbjct: 70 RIVHIHSVIILRRSDKRKDRVEISPEQLSAA-STEAERLAELTGRPMRVVGWYHSHPHIT 128 Query: 386 CWLSGVDINTQQSFEALNPRAVAVV----IDPIQSVKGKVVIDAFRLINPQ 526 W S VD+ TQ ++ ++ V ++ I+ + G+V+ F+ I Q Sbjct: 129 VWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQ 179
>BRCC3_HUMAN (P46736) BRCA1/BRCA2-containing complex subunit 3| Length = 316 Score = 60.8 bits (146), Expect = 3e-09 Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 33/171 (19%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDD--------YT-------------V 229 + V++ S A L L H + EVMGL +GE DD YT V Sbjct: 10 QAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTRSDSKFAYTGTEMRTVAEKVDAV 69 Query: 230 RVVDVFAM--------PQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFG 385 R+V + ++ + +S E + T + + TGRP VVGWYHSHP Sbjct: 70 RIVHIHSVIILRRSDKRKDRVEISPEQLSAA-STEAERLAELTGRPMRVVGWYHSHPHIT 128 Query: 386 CWLSGVDINTQQSFEALNPRAVAVV----IDPIQSVKGKVVIDAFRLINPQ 526 W S VD+ TQ ++ ++ V ++ I+ + G+V+ F+ I Q Sbjct: 129 VWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQAQ 179
>IF33_HUMAN (O15372) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h) Length = 352 Score = 58.2 bits (139), Expect = 2e-08 Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 2/165 (1%) Frame = +2 Query: 59 GAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVR 232 GA G G+ +QV I L +LK++KH + G EV+ G++LG V+D + Sbjct: 20 GAAGKGKGKGGSGDSAV-KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLE 77 Query: 233 VVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 412 + + F PQ T + + +Q M+ L+ + VGWY S +G +++ ++ Sbjct: 78 ITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLD 135 Query: 413 TQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQE 547 +Q S++ +V ++ DPI++ +G + + A+RL P+ M + +E Sbjct: 136 SQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLMEVCKE 179
>IF33_BOVIN (Q56JZ5) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) Length = 352 Score = 58.2 bits (139), Expect = 2e-08 Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 2/165 (1%) Frame = +2 Query: 59 GAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVR 232 GA G G+ +QV I L +LK++KH + G EV+ G++LG V+D + Sbjct: 20 GAAGKGKGKGGSGDSAV-KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLE 77 Query: 233 VVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 412 + + F PQ T + + +Q M+ L+ + VGWY S +G +++ ++ Sbjct: 78 ITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLD 135 Query: 413 TQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQE 547 +Q S++ +V ++ DPI++ +G + + A+RL P+ M + +E Sbjct: 136 SQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLMEVCKE 179
>IF33_MOUSE (Q91WK2) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p40 subunit) (eIF3h) Length = 352 Score = 57.8 bits (138), Expect = 3e-08 Identities = 46/165 (27%), Positives = 85/165 (51%), Gaps = 2/165 (1%) Frame = +2 Query: 59 GAGGMGQXXXXXXXXXXXEQVYISSLALLKMLKHGRA-GVPMEVM-GLMLGEFVDDYTVR 232 G GG G +QV I L +LK++KH + G EV+ G++LG V+D + Sbjct: 27 GKGGSGDSAV--------KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVED-RLE 77 Query: 233 VVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDIN 412 + + F PQ T + + +Q M+ L+ + VGWY S +G +++ ++ Sbjct: 78 ITNCFPFPQH-TEDDADFDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLD 135 Query: 413 TQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLINPQTMMLGQE 547 +Q S++ +V ++ DPI++ +G + + A+RL P+ M + +E Sbjct: 136 SQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRL-TPKLMEVCKE 179
>RPN8_NEUCR (Q8WZY4) 26S proteasome regulatory subunit rpn-8| Length = 352 Score = 56.6 bits (135), Expect = 6e-08 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 7/137 (5%) Frame = +2 Query: 119 VYISSLALLKMLKH-----GRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 V ++ L LL ++ H V+G++LG+ D VRV + FA+P + S Sbjct: 16 VSVAPLVLLSVVDHYNRTQANKSKSKRVVGVLLGQN-DGKNVRVSNSFAVPFEEDDKDPS 74 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 457 V +DH + +M DM K+ E ++GWYHS P L D++ + F+ P + V Sbjct: 75 VWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPK----LRASDLDINELFKRYTPNPLLV 130 Query: 458 VIDPIQSVKGKVVIDAF 508 ++D +Q + V DA+ Sbjct: 131 IVD-VQPKETGVPTDAY 146
>MYSM1_CHICK (Q5F3F2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 832 Score = 53.9 bits (128), Expect = 4e-07 Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 1/122 (0%) Frame = +2 Query: 116 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVD 292 QV +SS ALL M H + EV+GL+ G + + D V V TG+ E +D Sbjct: 578 QVKVSSEALLIMDLHSHVSMA-EVIGLLGGRYSEADKVVEVCAAEPCNSLSTGLQCE-MD 635 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 V QT + L G V+GWYHSHP F S DI+TQ +++ R A+ I I Sbjct: 636 PVSQTQASETLAARGYS--VIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIGMI 693 Query: 473 QS 478 S Sbjct: 694 VS 695
>PSD7_HUMAN (P51665) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog) Length = 324 Score = 53.5 bits (127), Expect = 5e-07 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 9/127 (7%) Frame = +2 Query: 113 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVVDV---FAMP--QSG 265 ++V + L LL ++ H G+ G V+G++LG + +V+DV FA+P + Sbjct: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS----WQKKVLDVSNSFAVPFDEDD 62 Query: 266 TGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPR 445 SV +DH + NM M K+ E +VGWYH+ P L DI + + P Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPN 118 Query: 446 AVAVVID 466 +V V+ID Sbjct: 119 SVLVIID 125
>PSD7_DROME (P26270) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Proteasome subunit p39B) (Protein Mov34) Length = 337 Score = 53.5 bits (127), Expect = 5e-07 Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 6/123 (4%) Frame = +2 Query: 116 QVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 +V + L LL ++ H G+ G V+G++LG + + V + FA+P + S Sbjct: 9 KVIVHPLVLLSVVDHFNRMGKIGNQKRVVGVLLGCWRSKGVLDVSNSFAVPFDEDDKDKS 68 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 457 V +DH + NM M K+ E VVGWYH+ P L DI + P +V V Sbjct: 69 VWFLDHDYLENMYGMFKKVNARERVVGWYHTGPK----LHQNDIAINELVRRYCPNSVLV 124 Query: 458 VID 466 +ID Sbjct: 125 IID 127
>PSD7_MOUSE (P26516) 26S proteasome non-ATPase regulatory subunit 7 (26S| proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein) Length = 321 Score = 53.5 bits (127), Expect = 5e-07 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 9/127 (7%) Frame = +2 Query: 113 EQVYISSLALLKMLKH----GRAGVPMEVMGLMLGEFVDDYTVRVVDV---FAMP--QSG 265 ++V + L LL ++ H G+ G V+G++LG + +V+DV FA+P + Sbjct: 7 QKVVVHPLVLLSVVDHFNRIGKVGNQKRVVGVLLGS----WQKKVLDVSNSFAVPFDEDD 62 Query: 266 TGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPR 445 SV +DH + NM M K+ E +VGWYH+ P L DI + + P Sbjct: 63 KDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPK----LHKNDIAINELMKRYCPN 118 Query: 446 AVAVVID 466 +V V+ID Sbjct: 119 SVLVIID 125
>RPN8_ASHGO (Q75F44) 26S proteasome regulatory subunit RPN8| Length = 326 Score = 51.2 bits (121), Expect = 2e-06 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Frame = +2 Query: 113 EQVYISSLALLKMLKH-GRAGVP--MEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 EQV ++ L LL +L H R P +G++LG+ T++V + FA+P + Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGS-TIKVTNSFALPFEEDEKNPD 64 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 376 V +DH + NM DM K+ E ++GWYHS P Sbjct: 65 VWFLDHNYIENMNDMCKKINAKEKMIGWYHSGP 97
>RPN8_SCHPO (O74440) 26S proteasome regulatory subunit rpn8| Length = 324 Score = 51.2 bits (121), Expect = 2e-06 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 5/123 (4%) Frame = +2 Query: 113 EQVYISSLALLKML---KHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 +QV + L LL + G V+G++LG+ D V V + +A+P + S Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGD-VVNVANSYAIPFEEDEKNAS 73 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 457 V +DH F +M +M K+ E +VGWYH+ P L D+ + P V V Sbjct: 74 VWFLDHNFMESMNEMFKKINANEKLVGWYHTGP----QLRPSDLEINNLLKKYIPNPVLV 129 Query: 458 VID 466 +ID Sbjct: 130 IID 132
>IF33_ARATH (Q9C5Z2) Eukaryotic translation initiation factor 3 subunit 3| (eIF-3 gamma) (eIF3 p38 subunit) (eIF3h) Length = 337 Score = 51.2 bits (121), Expect = 2e-06 Identities = 37/132 (28%), Positives = 61/132 (46%) Frame = +2 Query: 119 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHV 298 V I LA+LK++KH + P V G +LG V + V + F P +EA Sbjct: 25 VQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGS-VLEVTNCFPFPVRDDDEEIEADGAN 83 Query: 299 FQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQS 478 +Q M+ L++ VGWY S G + + I T +++ R V ++ DP ++ Sbjct: 84 YQLEMMRCLREVNVDNNTVGWYQS-TVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKA 142 Query: 479 VKGKVVIDAFRL 514 G + + A +L Sbjct: 143 DLGVLALKALKL 154
>MYSM1_HUMAN (Q5VVJ2) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 828 Score = 50.8 bits (120), Expect = 3e-06 Identities = 44/122 (36%), Positives = 59/122 (48%), Gaps = 1/122 (0%) Frame = +2 Query: 116 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVD 292 QV ++S ALL M H + EV+GL+ G + + D V V TG+ E +D Sbjct: 576 QVKVASEALLIMDLHAHVSMA-EVIGLLGGRYSEVDKVVEVCAAEPCNSLSTGLQCE-MD 633 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 V QT + L G V+GWYHSHP F S DI+TQ +++ R A I I Sbjct: 634 PVSQTQASETLAVRGFS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 691 Query: 473 QS 478 S Sbjct: 692 VS 693
>RPN8_YEAST (Q08723) 26S proteasome regulatory subunit RPN8| Length = 337 Score = 49.7 bits (117), Expect = 7e-06 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVPME---VMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 E+V I+ L LL L H E +G++LG+ + T+RV + FA+P + Sbjct: 5 EKVTIAPLVLLSALDHYERTQTKENKRCVGVILGD-ANSSTIRVTNSFALPFEEDEKNSD 63 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 376 V +DH + NM +M K+ E ++GWYHS P Sbjct: 64 VWFLDHNYIENMNEMCKKINAKEKLIGWYHSGP 96
>MYSM1_MOUSE (Q69Z66) Protein MYSM1 (Myb-like, SWIRM and MPN domain-containing| protein 1) Length = 819 Score = 49.3 bits (116), Expect = 9e-06 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 1/122 (0%) Frame = +2 Query: 116 QVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD-DYTVRVVDVFAMPQSGTGVSVEAVD 292 QV +++ ALL M H + EV+GL+ G + + D + V TG+ E +D Sbjct: 567 QVKVAAEALLIMNLHAHVSMA-EVIGLLGGRYSEADKVLEVCAAEPCNSLSTGLQCE-MD 624 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 V QT + L G V+GWYHSHP F S DI+TQ +++ R A I I Sbjct: 625 PVSQTQASETLALRGYS--VIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGMI 682 Query: 473 QS 478 S Sbjct: 683 VS 684
>RPN8_CANGA (Q6FMD8) 26S proteasome regulatory subunit RPN8| Length = 329 Score = 47.0 bits (110), Expect = 4e-05 Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%) Frame = +2 Query: 113 EQVYISSLALLKMLKH-GRAGVP--MEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 + V I+ L LL +L H R P +G++LG+ + T+RV + FA+P + Sbjct: 6 DNVTIAPLVLLSVLDHYERTNTPEGKRCVGVILGDSQTN-TIRVTNSFALPFEEDEKNSD 64 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHP 376 V +DH + +M +M K+ E ++GWYHS P Sbjct: 65 VWFLDHNYIESMNEMCKKINAKEKLIGWYHSGP 97
>STALP_MOUSE (Q76N33) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) (AMSH family protein) (AMSH-FP) Length = 436 Score = 46.6 bits (109), Expect = 6e-05 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +2 Query: 179 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 355 +E G++ G+ +++T+ V V VE V+ +F Q + + Sbjct: 291 IETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEELFNV-------QDQHGLLTL 343 Query: 356 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 520 GW H+HP +LS VD++T S++ + P A+A+V P G FRL N Sbjct: 344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
>STALP_HUMAN (Q96FJ0) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 45.8 bits (107), Expect = 1e-04 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%) Frame = +2 Query: 179 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 355 +E G++ G+ +++T+ V V +E V+ +F Q + + Sbjct: 291 IETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNV-------QDQHDLLTL 343 Query: 356 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 520 GW H+HP +LS VD++T S++ + P A+A+V P G FRL N Sbjct: 344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLPEAIAIVCSPKHKDTG-----IFRLTN 393
>STALP_PONPY (Q5R558) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 43.9 bits (102), Expect = 4e-04 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%) Frame = +2 Query: 179 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 355 +E G++ G+ +++T+ V V VE V+ +F Q + + Sbjct: 291 IETCGILCGKLTHNEFTITHVIVPKQSAGPDYCDVENVEELFNV-------QDQHDLLTL 343 Query: 356 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPIQSVKGKVVIDAFRLIN 520 GW H+HP +LS VD++T S++ + A+A+V P G FRL N Sbjct: 344 GWIHTHPTQTAFLSSVDLHTHCSYQLMLSEAIAIVCSPKHKDTG-----IFRLTN 393
>PSD7_ARATH (O24412) Probable 26S proteasome non-ATPase regulatory subunit 7| (26S proteasome regulatory subunit rpn8) (MOV34 protein) Length = 308 Score = 43.5 bits (101), Expect = 5e-04 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 5/123 (4%) Frame = +2 Query: 113 EQVYISSLALLKMLKHGRAGVP---MEVMGLMLGEFVDDYTVRVVDVFAMP--QSGTGVS 277 E+V + L LL ++ H V+G++LG V V + +A+P + S Sbjct: 15 EKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRG-VVDVTNSYAVPFEEDDKDPS 73 Query: 278 VEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAV 457 + +DH + +M M K+ E VVGWY + P L D++ F P V V Sbjct: 74 IWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPK----LRENDLDVHALFNGYVPNPVLV 129 Query: 458 VID 466 +ID Sbjct: 130 IID 132
>STABP_XENLA (Q63ZM7) STAM-binding protein-like (EC 3.1.2.15)| Length = 416 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 1/98 (1%) Frame = +2 Query: 179 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 355 +E G++ G+ + +++TV V V + E+ + +F L Q + + + Sbjct: 271 VETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELF-------LIQDQQGLITL 323 Query: 356 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 469 GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 324 GWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 361
>STABP_HUMAN (O95630) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 42.4 bits (98), Expect = 0.001 Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 1/98 (1%) Frame = +2 Query: 179 MEVMGLMLGEFV-DDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVV 355 +E G++ G+ + +++T+ V + + E + +F L Q + + + Sbjct: 279 VETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELF-------LIQDQQGLITL 331 Query: 356 GWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 469 GW H+HP +LS VD++T S++ + P +VA+V P Sbjct: 332 GWIHTHPTQTAFLSSVDLHTHCSYQMMLPESVAIVCSP 369
>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 357 Score = 42.4 bits (98), Expect = 0.001 Identities = 30/86 (34%), Positives = 47/86 (54%) Frame = +2 Query: 185 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 364 V+G +LG VD ++V V + F++P + + V AVD F NM ++ K+ E+++GWY Sbjct: 116 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 173 Query: 365 HSHPGFGCWLSGVDINTQQSFEALNP 442 + G V I+ S EA NP Sbjct: 174 AT--GHDITEHSVLIHEYYSREAPNP 197
>STABP_RAT (Q8R424) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +2 Query: 347 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 469 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 329 LTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 369
>STABP_MOUSE (Q9CQ26) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 41.2 bits (95), Expect = 0.002 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +2 Query: 347 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 469 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 329 LTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 369
>IF35_MOUSE (Q9DCH4) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f) Length = 361 Score = 41.2 bits (95), Expect = 0.002 Identities = 29/86 (33%), Positives = 47/86 (54%) Frame = +2 Query: 185 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 364 V+G +LG VD ++V V + F++P + + V AVD F NM ++ K+ E+++GWY Sbjct: 120 VIGTLLGT-VDKHSVEVTNCFSVPHNESEDEV-AVDMEFAKNMYELHKKVSPNELILGWY 177 Query: 365 HSHPGFGCWLSGVDINTQQSFEALNP 442 + G V I+ S E+ NP Sbjct: 178 AT--GHDITEHSVLIHEYYSRESPNP 201
>STABP_BRARE (Q6TH47) STAM-binding protein-like (EC 3.1.2.15)| Length = 418 Score = 40.8 bits (94), Expect = 0.003 Identities = 15/41 (36%), Positives = 27/41 (65%) Frame = +2 Query: 347 MVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDP 469 + +GW H+HP +LS VD++T S++ + P ++A+V P Sbjct: 323 ITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPESIAIVCSP 363
>IF35_ARATH (O04202) Eukaryotic translation initiation factor 3 subunit 5| (eIF-3 epsilon) (eIF3 p32 subunit) (eIF3f) Length = 293 Score = 38.5 bits (88), Expect = 0.016 Identities = 22/65 (33%), Positives = 35/65 (53%) Frame = +2 Query: 185 VMGLMLGEFVDDYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWY 364 V+G +LG + D TV + + +A+P + + V AVD + NML + E +VGWY Sbjct: 52 VIGTLLGSILPDGTVDIRNSYAVPHNESSDQV-AVDIDYHHNMLASHLKVNSKETIVGWY 110 Query: 365 HSHPG 379 + G Sbjct: 111 STGAG 115
>GCH1_RALSO (Q8XZK8) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)| Length = 209 Score = 32.3 bits (72), Expect = 1.1 Identities = 27/81 (33%), Positives = 32/81 (39%) Frame = -2 Query: 439 VQSFKTLLSIDIDTR*PATKTRMRVIPPYHHFWPAGLLEHVEHVGLEDVVDGLDTDPCPA 260 VQS I+IDT KT RV W LL DG D DP A Sbjct: 34 VQSLLEASGIEIDTA-HTGKTAQRV----RELWQRRLL------------DGYDIDPAEA 76 Query: 259 LRHGEDVDHPDRVVVDELAEH 197 L HG + D V++ +A H Sbjct: 77 LGHGFEDPRRDMVIIRSIAVH 97
>ARGD_METJA (Q58131) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 398 Score = 30.8 bits (68), Expect = 3.3 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +2 Query: 269 GVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRA 448 G + ++ + F L L T +P+ G+Y PGF ++ DI + EA+ + Sbjct: 128 GGEIISMYNAFHGRTLTTLAATPKPKYQDGFYPLPPGFK-YVPFNDIEALK--EAITDKT 184 Query: 449 VAVVIDPIQSVKGKVVID 502 A++I+P+Q G V D Sbjct: 185 AAIMIEPVQGEGGIHVAD 202
>DNAA_NEIMB (Q9JXS7) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +2 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 473 QSVKGK 490 Q +KGK Sbjct: 288 QFIKGK 293
>DNAA_NEIMA (Q9JW45) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +2 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 473 QSVKGK 490 Q +KGK Sbjct: 288 QFIKGK 293
>DNAA_NEIG1 (Q5FAJ2) Chromosomal replication initiator protein dnaA| Length = 518 Score = 30.4 bits (67), Expect = 4.3 Identities = 20/66 (30%), Positives = 32/66 (48%) Frame = +2 Query: 293 HVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNPRAVAVVIDPI 472 H+ Q ++LK RP+ V + HS ++ V NT F+ + ++ID I Sbjct: 230 HLVQAVGNELLKN--RPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDI 287 Query: 473 QSVKGK 490 Q +KGK Sbjct: 288 QFIKGK 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,634,435 Number of Sequences: 219361 Number of extensions: 1591383 Number of successful extensions: 4633 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 4480 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4601 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
