ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart23d01 |
|---|---|
| Clone Library Name | barley_pub |
>GSTO1_RAT (Q9Z339) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (Glutathione-dependent dehydroascorbate reductase) Length = 241 Score = 44.3 bits (103), Expect = 2e-04 Identities = 17/37 (45%), Positives = 27/37 (72%) Frame = +1 Query: 436 CPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 CPF+QR L+ L+ K + +E+ I++ NKP+WF + NP Sbjct: 32 CPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNP 68
>GSTO1_MOUSE (O09131) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (p28) Length = 240 Score = 44.3 bits (103), Expect = 2e-04 Identities = 17/37 (45%), Positives = 27/37 (72%) Frame = +1 Query: 436 CPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 CPF+QR L+ L+ K + +E+ I++ NKP+WF + NP Sbjct: 32 CPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNP 68
>GSTO1_PIG (Q9N1F5) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| (Glutathione-dependent dehydroascorbate reductase) Length = 241 Score = 43.5 bits (101), Expect = 4e-04 Identities = 17/37 (45%), Positives = 26/37 (70%) Frame = +1 Query: 436 CPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 CPF+QR LL L K + +++ I++ NKP+WF + NP Sbjct: 32 CPFAQRTLLVLNAKGIRHQVININLKNKPEWFFQKNP 68
>GSTO1_HUMAN (P78417) Glutathione transferase omega-1 (EC 2.5.1.18) (GSTO 1-1)| Length = 241 Score = 43.1 bits (100), Expect = 5e-04 Identities = 17/37 (45%), Positives = 26/37 (70%) Frame = +1 Query: 436 CPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 CPF++R L L+ K + +E+ I++ NKP+WF K NP Sbjct: 32 CPFAERTRLVLKAKGIRHEVININLKNKPEWFFKKNP 68
>GSTO2_HUMAN (Q9H4Y5) Glutathione transferase omega-2 (EC 2.5.1.18)| Length = 243 Score = 37.0 bits (84), Expect = 0.037 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +1 Query: 436 CPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 CP+S R L L+ K + +E+ I++ NKP+W+ +P Sbjct: 32 CPYSHRTRLVLKAKDIRHEVVNINLRNKPEWYYTKHP 68
>CLIC5_HUMAN (Q9NZA1) Chloride intracellular channel protein 5| Length = 410 Score = 36.2 bits (82), Expect = 0.063 Identities = 17/45 (37%), Positives = 29/45 (64%) Frame = +1 Query: 388 EVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 E+ VKA + +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 176 ELFVKAGIDG-ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 219
>CLIC5_RAT (Q9EPT8) Chloride intracellular channel protein 5| Length = 251 Score = 36.2 bits (82), Expect = 0.063 Identities = 17/45 (37%), Positives = 29/45 (64%) Frame = +1 Query: 388 EVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 E+ VKA + +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 17 ELFVKAGIDG-ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 60
>CLIC5_MOUSE (Q8BXK9) Chloride intracellular channel protein 5| Length = 251 Score = 36.2 bits (82), Expect = 0.063 Identities = 17/45 (37%), Positives = 29/45 (64%) Frame = +1 Query: 388 EVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 E+ VKA + +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 17 ELFVKAGIDG-ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 60
>CLIC4_RAT (Q9Z0W7) Chloride intracellular channel protein 4 (Intracellular| chloride ion channel protein p64H1) Length = 252 Score = 35.8 bits (81), Expect = 0.083 Identities = 18/55 (32%), Positives = 31/55 (56%) Frame = +1 Query: 382 MTEVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 + E+ VKA +++G+CPFSQR+ + L K V + + +D+ KP + P Sbjct: 17 LIELFVKAG-SDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAHLQNLAP 70
>CLIC4_MOUSE (Q9QYB1) Chloride intracellular channel protein 4 (mc3s5/mtCLIC)| Length = 252 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = +1 Query: 382 MTEVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 + E+ VKA +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 17 LIELFVKAG-SDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKP 62
>CLIC4_HUMAN (Q9Y696) Chloride intracellular channel protein 4 (Intracellular| chloride ion channel protein p64H1) Length = 252 Score = 35.4 bits (80), Expect = 0.11 Identities = 17/47 (36%), Positives = 29/47 (61%) Frame = +1 Query: 382 MTEVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 + E+ VKA +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 17 LIELFVKAG-SDGESIGNCPFSQRLFMILWLKGVVFSVTTVDLKRKP 62
>CLIC2_HUMAN (O15247) Chloride intracellular channel protein 2 (XAP121)| Length = 247 Score = 35.0 bits (79), Expect = 0.14 Identities = 17/53 (32%), Positives = 31/53 (58%) Frame = +1 Query: 388 EVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 E+ VKA +++G+CPF QR+ + L K V + + +D++ KP+ + P Sbjct: 15 ELFVKAG-SDGESIGNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAP 66
>CLIC2_RAT (Q5M883) Chloride intracellular channel protein 2| Length = 245 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/53 (33%), Positives = 30/53 (56%) Frame = +1 Query: 388 EVCVKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 E+ VKA +++G+CPF QR+ + L K V + + ID + KP+ + P Sbjct: 15 ELFVKAG-SDGESIGNCPFCQRLFMILWLKGVKFNVTTIDTARKPEELKDLAP 66
>CLIC5_BOVIN (P35526) Chloride intracellular channel protein 5 (Chlorine channel| protein p64) Length = 437 Score = 34.7 bits (78), Expect = 0.18 Identities = 16/42 (38%), Positives = 27/42 (64%) Frame = +1 Query: 397 VKAAVGHPDTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 VKA + +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 205 VKAGIDG-ESIGNCPFSQRLFMILWLKGVVFNVTTVDLKRKP 245
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 33.9 bits (76), Expect = 0.31 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +1 Query: 421 DTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 415 ESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKP 448
>CLIC6_RAT (Q811Q2) Chloride intracellular channel 6| Length = 612 Score = 33.9 bits (76), Expect = 0.31 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +1 Query: 421 DTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 390 ESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKP 423
>CLIC6_MOUSE (Q8BHB9) Chloride intracellular channel 6| Length = 596 Score = 33.9 bits (76), Expect = 0.31 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +1 Query: 421 DTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 374 ESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKP 407
>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6| Length = 704 Score = 33.9 bits (76), Expect = 0.31 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +1 Query: 421 DTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKP 522 +++G+CPFSQR+ + L K V + + +D+ KP Sbjct: 482 ESIGNCPFSQRLFMILWLKGVIFNVTTVDLKRKP 515
>CLIC1_PIG (Q29238) Chloride intracellular channel protein 1 (Nuclear chloride| ion channel 27) (Fragment) Length = 109 Score = 32.3 bits (72), Expect = 0.92 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 427 LGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 +G+CPFSQR+ + L K V + + +D + + K+ P Sbjct: 20 IGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP 59
>CLIC1_MOUSE (Q9Z1Q5) Chloride intracellular channel protein 1 (Nuclear chloride| ion channel 27) (NCC27) Length = 240 Score = 32.3 bits (72), Expect = 0.92 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 427 LGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 +G+CPFSQR+ + L K V + + +D + + K+ P Sbjct: 20 IGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP 59
>CLIC1_HUMAN (O00299) Chloride intracellular channel protein 1 (Nuclear chloride| ion channel 27) (NCC27) (Chloride channel ABP) (Regulatory nuclear chloride ion channel protein) (hRNCC) Length = 240 Score = 32.3 bits (72), Expect = 0.92 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 427 LGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 +G+CPFSQR+ + L K V + + +D + + K+ P Sbjct: 20 IGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCP 59
>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 26.6 bits (57), Expect(2) = 1.0 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 Query: 223 VTHSLADFDFHDHRP 179 +THSL +F DHRP Sbjct: 231 ITHSLCTLEFEDHRP 245 Score = 24.3 bits (51), Expect(2) = 1.0 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 80 LPKMAHLEHPIPWHGSPKQPSHP 12 LP +HL P+ G P++PS P Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278
>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA| ligase) (GlnRS) Length = 580 Score = 26.6 bits (57), Expect(2) = 1.0 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -2 Query: 223 VTHSLADFDFHDHRP 179 +THSL +F DHRP Sbjct: 231 ITHSLCTLEFEDHRP 245 Score = 24.3 bits (51), Expect(2) = 1.0 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -1 Query: 80 LPKMAHLEHPIPWHGSPKQPSHP 12 LP +HL P+ G P++PS P Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278
>CLIC1_RABIT (Q95MF9) Chloride intracellular channel protein 1| Length = 240 Score = 32.0 bits (71), Expect = 1.2 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 427 LGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 +G+CPFSQR+ + L K V + + +D + + K+ P Sbjct: 20 IGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVHKLCP 59
>CLIC3_HUMAN (O95833) Chloride intracellular channel protein 3| Length = 236 Score = 31.6 bits (70), Expect = 1.6 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +1 Query: 421 DTLGDCPFSQRVLLTLEEKKVPYEMKLIDVSNKPD 525 +++G CP QR+ + L K VP+ + +D PD Sbjct: 17 ESVGHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPD 51
>SSPA_HAEDU (Q7VLK4) Stringent starvation protein A homolog| Length = 214 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = +1 Query: 442 FSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 +S +V + L EK VPYE++ I+ + + FL++NP Sbjct: 21 YSHQVRIVLAEKGVPYELENINPNTISEDFLELNP 55
>PTP3_YEAST (P40048) Tyrosine-protein phosphatase 3 (EC 3.1.3.48)| (Protein-tyrosine phosphatase 3) (PTPase 3) Length = 928 Score = 30.8 bits (68), Expect = 2.7 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 433 DCPFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 D +++LLT +++ PYE+ I V N PD +NP Sbjct: 732 DAILIRQILLTYHDQEKPYELLQIQVKNWPDLGTLLNP 769
>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)| Length = 224 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +1 Query: 439 PFSQRVLLTLEEKKVPYEMKLIDVSNKPDWFLKINP 546 PFS+RV + L+ K +PYE + NK L +NP Sbjct: 16 PFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNP 51
>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin| heavy chain A; Activation peptide; Plasmin heavy chain A, short form; Plasmin light chain B] Length = 812 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/55 (32%), Positives = 22/55 (40%) Frame = +3 Query: 105 PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 269 P AGL R P K W T R W+ + K+C T AP+ G E Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478
>IN21_MAIZE (P49248) IN2-1 protein| Length = 243 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +1 Query: 436 CPFSQRVLLTLEEKKVPYEMKL--IDVSNKPDWF 531 CPF+QR +T K + +M+L ID+ +KP W+ Sbjct: 41 CPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWY 74
>LIGF_PSEPA (P30347) Protein ligF| Length = 257 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = +1 Query: 445 SQRVLLTLEEKKVPYEMKLIDVSN---KPDWFLKINP 546 S + L TL EK + +E +D S DWF KINP Sbjct: 14 SLKPLATLYEKGLEFEQVFVDPSKFEQHSDWFKKINP 50
>GST3_SCHPO (Q9P6M1) Glutathione S-transferase III (EC 2.5.1.18) (GST-III)| Length = 242 Score = 29.3 bits (64), Expect = 7.8 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%) Frame = +1 Query: 445 SQRVLLTLEEKKVPYEMKLID--VSNKPDWFLKINP 546 S R++ LEE KVPYE+K+ D P + K++P Sbjct: 12 STRIVWMLEELKVPYEIKVYDRVDGRAPPAYTKLSP 47 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,315,383 Number of Sequences: 219361 Number of extensions: 1269984 Number of successful extensions: 3782 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 3649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3780 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
