ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23c09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1006 Score = 363 bits (183), Expect = 4e-97 Identities = 410/482 (85%), Gaps = 3/482 (0%) Strand = Plus / Plus Query: 102 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 161 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 49 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 108 Query: 162 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 221 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 109 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 168 Query: 222 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 281 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 169 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 228 Query: 282 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 341 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 229 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 288 Query: 342 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 401 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 289 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 348 Query: 402 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 461 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 349 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 408 Query: 462 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 520 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 409 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 467 Query: 521 gctgga-taaatagaagccgccctgngaaagtttagtgatggccctttcttccttggcca 579 || || |||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 468 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 527 Query: 580 gt 581 || Sbjct: 528 gt 529
>dbj|AK065887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J05, full insert sequence Length = 1252 Score = 363 bits (183), Expect = 4e-97 Identities = 410/482 (85%), Gaps = 3/482 (0%) Strand = Plus / Plus Query: 102 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 161 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 222 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 281 Query: 162 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 221 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 282 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 341 Query: 222 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 281 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 342 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 401 Query: 282 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 341 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 402 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 461 Query: 342 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 401 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 462 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 521 Query: 402 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 461 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 522 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 581 Query: 462 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 520 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 582 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 640 Query: 521 gctgga-taaatagaagccgccctgngaaagtttagtgatggccctttcttccttggcca 579 || || |||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 641 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 700 Query: 580 gt 581 || Sbjct: 701 gt 702
>dbj|AK061849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F06, full insert sequence Length = 1029 Score = 363 bits (183), Expect = 4e-97 Identities = 410/482 (85%), Gaps = 3/482 (0%) Strand = Plus / Plus Query: 102 cccccttcgctgacctccacctccgagcccccgccactcttcgacggcacgaccaggttg 161 |||||||| ||||||||| | || |||||||| || |||||||| || || ||||||||| Sbjct: 98 cccccttccctgacctcctcatcggagccccctcccctcttcgatggaaccaccaggttg 157 Query: 162 tatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaattacaagggt 221 || ||||| || |||||||| |||||||||||||| |||||||||||||| ||||||||| Sbjct: 158 tacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaactacaagggt 217 Query: 222 ttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggtacaag 281 ||||| || ||||||||||| ||||| | ||||||||||||||||| || ||||||||| Sbjct: 218 ttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggtacaag 277 Query: 282 gagaaggtttacccacagaacaaggtgccttcactggagcataataaccaagtgaaagga 341 ||||||||||||||| |||||||||| |||||||| ||||| || || || ||||||||| Sbjct: 278 gagaaggtttacccagagaacaaggtaccttcacttgagcacaacaatcaggtgaaagga 337 Query: 342 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 401 || |||||||||||||||||||||||||||| ||||||||| || || ||||| || ||| Sbjct: 338 gaaagcttggatttggtcaagtacattgacaccaatttcgaagggccagcattactccct 397 Query: 402 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 461 |||||||||| ||| ||||||| | |||||||| |||| ||| || |||| |||||| Sbjct: 398 gatgattctgagaagcagcagttcgctgaggagcttcttgcgtacactgatgcgttcaac 457 Query: 462 aaagcactatactcatccataacctccaagggagatgt-tgcagaggaaactgttgctgc 520 |||||| |||||||||||| | ||||||||||||| ||| || || |||||||||| Sbjct: 458 aaagcatcgtactcatccatagtcgccaagggagatgtgtgc-gatgaggctgttgctgc 516 Query: 521 gctgga-taaatagaagccgccctgngaaagtttagtgatggccctttcttccttggcca 579 || || |||||||||| || ||| |||||| | |||||||| |||||||||||||| Sbjct: 517 tcttgacaaaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggcca 576 Query: 580 gt 581 || Sbjct: 577 gt 578
>gb|AY111952.1| Zea mays CL5438_1 mRNA sequence Length = 1008 Score = 210 bits (106), Expect = 4e-51 Identities = 199/230 (86%) Strand = Plus / Plus Query: 147 ggcacgaccaggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgcc 206 ||||| ||||||||||| || || |||| ||||||| ||||||||||||||||||||| Sbjct: 108 ggcaccaccaggttgtacgtggcctatctttgcccgttcgcgcagcgcgcttggattgct 167 Query: 207 aggaattacaagggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacagg 266 || || ||||||||| | || |||||||| |||||||| || ||||||| || |||||| Sbjct: 168 agaaactacaagggtctacaggacaagattaagatagttgccatcgatctcgctgacagg 227 Query: 267 cccgcctggtacaaggagaaggtttacccacagaacaaggtgccttcactggagcataat 326 || || |||||||||||||||||||| ||| | |||||||||||||| || ||||| | Sbjct: 228 ccagcgtggtacaaggagaaggtttatccagaaaacaaggtgccttctctagagcacgac 287 Query: 327 aaccaagtgaaaggagagagcttggatttggtcaagtacattgacagcaa 376 ||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 288 aaccaggtgaaaggagagagcttggatttggttaagtacattgacagcaa 337
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 217 agggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggt 276 |||||||||| || ||||||||||| ||||| | ||||||||||||||||| || |||| Sbjct: 9686175 agggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggt 9686116 Query: 277 acaaggagaaggtttacccacagaacaaggt 307 |||||||||||||||||||| |||||||||| Sbjct: 9686115 acaaggagaaggtttacccagagaacaaggt 9686085 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 304 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 363 |||| |||||||| ||||| || || || ||||||||||| ||||||||||||||||||| Sbjct: 9685675 aggtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagt 9685616 Query: 364 acattgacagcaatttcgatggccctgcattgcttcctgatg 405 ||||||||| ||||||||| || || ||||| || ||||||| Sbjct: 9685615 acattgacaccaatttcgaagggccagcattactccctgatg 9685574 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 155 caggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaatta 214 ||||||||| ||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 9686396 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 9686337 Query: 215 caagg 219 ||||| Sbjct: 9686336 caagg 9686332 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 429 gaggagctgcttgtgtataccgatgagttcaataaagcactatactcatccataacctcc 488 |||||||| |||| ||| || |||| |||||| |||||| |||||||||||| | || Sbjct: 9685458 gaggagcttcttgcgtacactgatgcgttcaacaaagcatcgtactcatccatagtcgcc 9685399 Query: 489 aagggagatgt 499 ||||||||||| Sbjct: 9685398 aagggagatgt 9685388 Score = 46.1 bits (23), Expect = 0.13 Identities = 46/54 (85%) Strand = Plus / Minus Query: 528 aaatagaagccgccctgngaaagtttagtgatggccctttcttccttggccagt 581 |||||||||| || ||| |||||| | |||||||| |||||||||||||||| Sbjct: 9685247 aaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggccagt 9685194 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 27860676 gccgccgcagccgctgccgc 27860695 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 ctccacctccgagcccccgccactcttcgacggcacgaccaggt 159 |||| |||| |||||||| | |||||||||||||| ||||||| Sbjct: 9691659 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggt 9691616 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 tgatggccctttcttccttggcca 579 ||||||||| |||||||||||||| Sbjct: 9681201 tgatggcccattcttccttggcca 9681178 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 42 accgtcgccatggccgccgcagccgctgccgc 73 ||||||| ||| |||||||| ||||||||||| Sbjct: 8779895 accgtcgtcatcgccgccgccgccgctgccgc 8779864 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cgtcgccatggccgccgcagccgc 67 |||||||||||||||||| ||||| Sbjct: 577323 cgtcgccatggccgccgccgccgc 577346
>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete sequence Length = 165113 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 217 agggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggt 276 |||||||||| || ||||||||||| ||||| | ||||||||||||||||| || |||| Sbjct: 107074 agggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggt 107015 Query: 277 acaaggagaaggtttacccacagaacaaggt 307 |||||||||||||||||||| |||||||||| Sbjct: 107014 acaaggagaaggtttacccagagaacaaggt 106984 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 304 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 363 |||| |||||||| ||||| || || || ||||||||||| ||||||||||||||||||| Sbjct: 106574 aggtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagt 106515 Query: 364 acattgacagcaatttcgatggccctgcattgcttcctgatg 405 ||||||||| ||||||||| || || ||||| || ||||||| Sbjct: 106514 acattgacaccaatttcgaagggccagcattactccctgatg 106473 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 155 caggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaatta 214 ||||||||| ||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 107295 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 107236 Query: 215 caagg 219 ||||| Sbjct: 107235 caagg 107231 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 429 gaggagctgcttgtgtataccgatgagttcaataaagcactatactcatccataacctcc 488 |||||||| |||| ||| || |||| |||||| |||||| |||||||||||| | || Sbjct: 106357 gaggagcttcttgcgtacactgatgcgttcaacaaagcatcgtactcatccatagtcgcc 106298 Query: 489 aagggagatgt 499 ||||||||||| Sbjct: 106297 aagggagatgt 106287 Score = 46.1 bits (23), Expect = 0.13 Identities = 46/54 (85%) Strand = Plus / Minus Query: 528 aaatagaagccgccctgngaaagtttagtgatggccctttcttccttggccagt 581 |||||||||| || ||| |||||| | |||||||| |||||||||||||||| Sbjct: 106146 aaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggccagt 106093 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 ctccacctccgagcccccgccactcttcgacggcacgaccaggt 159 |||| |||| |||||||| | |||||||||||||| ||||||| Sbjct: 112558 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggt 112515 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 tgatggccctttcttccttggcca 579 ||||||||| |||||||||||||| Sbjct: 102100 tgatggcccattcttccttggcca 102077
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 1e-20 Identities = 82/91 (90%) Strand = Plus / Minus Query: 217 agggtttgcaagacaagatcaagatagtcgcagtcgatcttgcagacaggcccgcctggt 276 |||||||||| || ||||||||||| ||||| | ||||||||||||||||| || |||| Sbjct: 9684296 agggtttgcaggataagatcaagattgtcgcgattgatcttgcagacaggcctgcttggt 9684237 Query: 277 acaaggagaaggtttacccacagaacaaggt 307 |||||||||||||||||||| |||||||||| Sbjct: 9684236 acaaggagaaggtttacccagagaacaaggt 9684206 Score = 99.6 bits (50), Expect = 1e-17 Identities = 89/102 (87%) Strand = Plus / Minus Query: 304 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 363 |||| |||||||| ||||| || || || ||||||||||| ||||||||||||||||||| Sbjct: 9683796 aggtaccttcacttgagcacaacaatcaggtgaaaggagaaagcttggatttggtcaagt 9683737 Query: 364 acattgacagcaatttcgatggccctgcattgcttcctgatg 405 ||||||||| ||||||||| || || ||||| || ||||||| Sbjct: 9683736 acattgacaccaatttcgaagggccagcattactccctgatg 9683695 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 155 caggttgtatgttgcatatcactgcccgtacgcgcagcgcgcttggattgccaggaatta 214 ||||||||| ||||| || |||||||| |||||||||||||| |||||||||||||| || Sbjct: 9684517 caggttgtacgttgcgtaccactgcccttacgcgcagcgcgcgtggattgccaggaacta 9684458 Query: 215 caagg 219 ||||| Sbjct: 9684457 caagg 9684453 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 429 gaggagctgcttgtgtataccgatgagttcaataaagcactatactcatccataacctcc 488 |||||||| |||| ||| || |||| |||||| |||||| |||||||||||| | || Sbjct: 9683579 gaggagcttcttgcgtacactgatgcgttcaacaaagcatcgtactcatccatagtcgcc 9683520 Query: 489 aagggagatgt 499 ||||||||||| Sbjct: 9683519 aagggagatgt 9683509 Score = 46.1 bits (23), Expect = 0.13 Identities = 46/54 (85%) Strand = Plus / Minus Query: 528 aaatagaagccgccctgngaaagtttagtgatggccctttcttccttggccagt 581 |||||||||| || ||| |||||| | |||||||| |||||||||||||||| Sbjct: 9683368 aaatagaagctgctctgtcaaagttcaacgatggcccattcttccttggccagt 9683315 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 27952000 gccgccgcagccgctgccgc 27952019 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 116 ctccacctccgagcccccgccactcttcgacggcacgaccaggt 159 |||| |||| |||||||| | |||||||||||||| ||||||| Sbjct: 9689780 ctccgcctctgagccccctcgcctcttcgacggcaccaccaggt 9689737 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 tgatggccctttcttccttggcca 579 ||||||||| |||||||||||||| Sbjct: 9679322 tgatggcccattcttccttggcca 9679299 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 42 accgtcgccatggccgccgcagccgctgccgc 73 ||||||| ||| |||||||| ||||||||||| Sbjct: 8777730 accgtcgtcatcgccgccgccgccgctgccgc 8777699 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cgtcgccatggccgccgcagccgc 67 |||||||||||||||||| ||||| Sbjct: 577321 cgtcgccatggccgccgccgccgc 577344
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 363 |||||||||| || ||||| | ||||| ||||||||||||||||||||||||| |||| Sbjct: 241428 aggtgccttctctagagcacgacaaccatatgaaaggagagagcttggatttggttaagt 241487 Query: 364 acattgacagcaatttcga 382 | ||||||||||| ||||| Sbjct: 241488 atattgacagcaacttcga 241506 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 261 gacaggcccgcctggtacaaggagaaggtttacccacagaacaaggtg 308 |||||||| || |||||||||||||||||||| ||| | ||||||||| Sbjct: 241257 gacaggccagcgtggtacaaggagaaggtttatccagaaaacaaggtg 241304
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 304 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 363 |||||||||| || ||||| | ||||| ||||||||||||||||||||||||| |||| Sbjct: 226916 aggtgccttctctagagcacgacaaccatatgaaaggagagagcttggatttggttaagt 226975 Query: 364 acattgacagcaatttcga 382 | ||||||||||| ||||| Sbjct: 226976 atattgacagcaacttcga 226994 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 261 gacaggcccgcctggtacaaggagaaggtttacccacagaacaaggtg 308 |||||||| || |||||||||||||||||||| ||| | ||||||||| Sbjct: 226745 gacaggccagcgtggtacaaggagaaggtttatccagaaaacaaggtg 226792
>emb|Y17386.1|TAE17386 Triticum aestivum mRNA for putative In2.1-like protein Length = 1031 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 339 ggagagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgctt 398 |||||||||||||||||| |||||||||| |||| ||||||| | ||||| ||| ||||| Sbjct: 318 ggagagagcttggatttgatcaagtacatcgacaccaatttccaaggcccggcactgctt 377 Query: 399 cct 401 ||| Sbjct: 378 cct 380 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 273 tggtacaaggagaaggtttacccacagaacaaggtgccttcactggagca 322 ||||||||||||||||||||||||||| || ||||||||| |||||||| Sbjct: 252 tggtacaaggagaaggtttacccacagggcacggtgccttccctggagca 301
>ref|XM_493845.1| Oryza sativa (japonica cultivar-group), mRNA Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 186/236 (78%), Gaps = 1/236 (0%) Strand = Plus / Plus Query: 342 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 401 ||||| || |||||| |||||||||| |||||| ||||||| ||||||||| |||| ||| Sbjct: 314 gagagtttagatttgatcaagtacatcgacagccatttcgaaggccctgcactgctccct 373 Query: 402 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 461 || ||| ||| |||| |||||| | || ||||| ||| |||| || ||| ||| | Sbjct: 374 gaagatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttacc 433 Query: 462 aaagcactatactcatccataacctccaagggagatgttgcagaggaaactgttgctgcg 521 |||||||| |||||| || ||| |||||| | |||| | ||| || || |||||||| Sbjct: 434 aaagcactctactcacccttaatctccaaagcagatttgtcagctgagacggttgctgct 493 Query: 522 ctggataa-atagaagccgccctgngaaagtttagtgatggccctttcttccttgg 576 ||||| || |||||||| |||||| ||||| ||||||| || ||||||||||| Sbjct: 494 ctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttccttgg 549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 176 ctgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagat 235 |||||||| || ||||||||||||||| |||||| | |||||| ||||| |||||||| Sbjct: 148 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggacaagat 207 Query: 236 caagatagtcg 246 | || |||||| Sbjct: 208 cgagctagtcg 218
>gb|AF237487.2|AF237487 Oryza sativa XIG mRNA, complete cds Length = 1058 Score = 65.9 bits (33), Expect = 1e-07 Identities = 186/236 (78%), Gaps = 1/236 (0%) Strand = Plus / Plus Query: 342 gagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgcttcct 401 ||||| || |||||| |||||||||| |||||| ||||||| ||||||||| |||| ||| Sbjct: 315 gagagtttagatttgatcaagtacatcgacagccatttcgaaggccctgcactgctccct 374 Query: 402 gatgattctgcaaagaagcagttttccgaggagctgcttgtgtataccgatgagttcaat 461 || ||| ||| |||| |||||| | || ||||| ||| |||| || ||| ||| | Sbjct: 375 gaagatcctgagaagagacagtttgctgatgagcttattgcgtatgccaatgcgtttacc 434 Query: 462 aaagcactatactcatccataacctccaagggagatgttgcagaggaaactgttgctgcg 521 |||||||| |||||| || ||| |||||| | |||| | ||| || || |||||||| Sbjct: 435 aaagcactctactcacccttaatctccaaagcagatttgtcagctgagacggttgctgct 494 Query: 522 ctggataa-atagaagccgccctgngaaagtttagtgatggccctttcttccttgg 576 ||||| || |||||||| |||||| ||||| ||||||| || ||||||||||| Sbjct: 495 ctggacaagatagaagctgccctgtcgaagttcggtgatggtccattcttccttgg 550 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 176 ctgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagat 235 |||||||| || ||||||||||||||| |||||| | |||||| ||||| |||||||| Sbjct: 149 ctgcccgtttgctcagcgcgcttggattatcaggaacttcaagggcttgcaggacaagat 208 Query: 236 caagatagtcg 246 | || |||||| Sbjct: 209 cgagctagtcg 219
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 304 aggtgccttcactggagcataataaccaagtgaaaggagagagcttggatttggtcaagt 363 |||||||| || | ||||||||||||| ||||| |||||||||| | || || | |||| Sbjct: 20765 aggtgcctgcattagagcataataaccgagtgataggagagagccttgacctgattaagt 20824 Query: 364 acattgacagcaatttcga 382 |||| |||| ||||||||| Sbjct: 20825 acatcgacaccaatttcga 20843
>emb|X58573.1|ZMIN21 Maize In2-1 mRNA Length = 906 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 273 tggtacaaggagaaggtttacccacagaacaaggtgccttcactggagca 322 ||||||||||| ||||||||| ||||| || ||||||||| |||||||| Sbjct: 237 tggtacaaggacaaggtttacgcacagggcacggtgccttccctggagca 286
>ref|NM_120357.3| Arabidopsis thaliana unknown protein AT5G02790 mRNA, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 264 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 310 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 244 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 290
>gb|AY140069.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 955 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 264 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 310 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 213 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 259
>gb|AY085126.1| Arabidopsis thaliana clone 13224 mRNA, complete sequence Length = 987 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 264 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 310 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 245 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 291
>gb|BT002166.1| Arabidopsis thaliana unknown protein (not annotated) mRNA, complete cds Length = 763 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 264 aggcccgcctggtacaaggagaaggtttacccacagaacaaggtgcc 310 ||||| || |||||||||||||| || || ||| ||||||||||||| Sbjct: 196 aggcctgcttggtacaaggagaaagtatatccagagaacaaggtgcc 242
>ref|XM_493843.1| Oryza sativa (japonica cultivar-group), mRNA Length = 885 Score = 44.1 bits (22), Expect = 0.51 Identities = 64/78 (82%) Strand = Plus / Plus Query: 339 ggagagagcttggatttggtcaagtacattgacagcaatttcgatggccctgcattgctt 398 |||||||| ||||||||| |||||||||| |||| ||| || | ||||| |||| | Sbjct: 265 ggagagagtttggatttgatcaagtacatagacatcaactttgcaggccccagattgact 324 Query: 399 cctgatgattctgcaaag 416 ||||||||||||| |||| Sbjct: 325 cctgatgattctgaaaag 342 Score = 44.1 bits (22), Expect = 0.51 Identities = 52/62 (83%) Strand = Plus / Plus Query: 177 tgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagatc 236 ||||| || ||||| || || ||||| || ||||| |||||||||||||| || |||||| Sbjct: 106 tgcccatatgcgcaacgggcatggatcgcaaggaactacaagggtttgcaggagaagatc 165 Query: 237 aa 238 || Sbjct: 166 aa 167 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 tgatggccctttcttccttggcca 579 ||||||||| |||||||||||||| Sbjct: 483 tgatggcccattcttccttggcca 506
>ref|XM_478397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1617 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 43 ccgtcgccatggccgccgcagccgctgccg 72 ||||||||||||||||||| ||||| |||| Sbjct: 188 ccgtcgccatggccgccgccgccgccgccg 217
>gb|AC112633.6| Rattus norvegicus 11 BAC CH230-200K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230130 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgcaccggt 79 ||||||||||||||||||||| |||| Sbjct: 110263 gccgccgcagccgctgccgcagcggt 110238
>gb|BT025043.1| Drosophila melanogaster IP16421 full insert cDNA Length = 2570 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tggccgccgcagccgctgccgc 73 |||||||||||||||||||||| Sbjct: 1440 tggccgccgcagccgctgccgc 1461
>gb|AY332468.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase (GST) mRNA, complete cds Length = 1092 Score = 44.1 bits (22), Expect = 0.51 Identities = 52/62 (83%) Strand = Plus / Plus Query: 177 tgcccgtacgcgcagcgcgcttggattgccaggaattacaagggtttgcaagacaagatc 236 ||||| || ||||| || || ||||| || ||||| |||||||||||||| || |||||| Sbjct: 144 tgcccatatgcgcaacgggcatggatcgcaaggaactacaagggtttgcaggagaagatc 203 Query: 237 aa 238 || Sbjct: 204 aa 205 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 556 tgatggccctttcttccttggcca 579 ||||||||| |||||||||||||| Sbjct: 521 tgatggcccattcttccttggcca 544
>ref|XM_967227.1| PREDICTED: Tribolium castaneum similar to CG9151-PA, isoform A (LOC661038), mRNA Length = 1149 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 48 gccatggccgccgcagccgctgccgc 73 |||||||||||||| ||||||||||| Sbjct: 610 gccatggccgccgccgccgctgccgc 635
>ref|NM_169216.1| Drosophila melanogaster Pox meso CG9610-RB, transcript variant B (Poxm), mRNA Length = 1769 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tggccgccgcagccgctgccgc 73 |||||||||||||||||||||| Sbjct: 1444 tggccgccgcagccgctgccgc 1465
>ref|NM_079552.1| Drosophila melanogaster Pox meso CG9610-RA, transcript variant A (Poxm), mRNA Length = 1209 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tggccgccgcagccgctgccgc 73 |||||||||||||||||||||| Sbjct: 884 tggccgccgcagccgctgccgc 905
>gb|DQ311293.1| Bombyx mori NADH dehydrogenase (ubiquinone) Fe-S protein 8 mRNA, complete cds Length = 1532 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 282 gagaaggtttacccacagaaca 303 |||||||||||||||||||||| Sbjct: 190 gagaaggtttacccacagaaca 211
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone BACR33N15, complete sequence Length = 187701 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 52 tggccgccgcagccgctgccgc 73 |||||||||||||||||||||| Sbjct: 140914 tggccgccgcagccgctgccgc 140935
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 43 ccgtcgccatggccgccgcagccgctgccg 72 ||||||||||||||||||| ||||| |||| Sbjct: 19692464 ccgtcgccatggccgccgccgccgccgccg 19692435 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ccatggccgccgcagccgctgccg 72 ||||||||||||||||||| |||| Sbjct: 25993909 ccatggccgccgcagccgccgccg 25993932
>ref|XM_221668.3| PREDICTED: Rattus norvegicus oligodendrocyte transcription factor 2 (predicted) (Olig2_predicted), mRNA Length = 1048 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgcaccggt 79 ||||||||||||||||||||| |||| Sbjct: 760 gccgccgcagccgctgccgcagcggt 785
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 43 ccgtcgccatggccgccgcagccgctgccg 72 ||||||||||||||||||| ||||| |||| Sbjct: 24470 ccgtcgccatggccgccgccgccgccgccg 24441
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 43 ccgtcgccatggccgccgcagccgctgccg 72 ||||||||||||||||||| ||||| |||| Sbjct: 131114 ccgtcgccatggccgccgccgccgccgccg 131085
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete sequence Length = 244757 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 52 tggccgccgcagccgctgccgc 73 |||||||||||||||||||||| Sbjct: 120967 tggccgccgcagccgctgccgc 120946
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 110951 ggccgccgcagccgctgccgc 110931
>gb|AC102525.8| Mus musculus chromosome 8, clone RP24-133K20, complete sequence Length = 162463 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 154924 ggccgccgcagccgctgccgc 154904
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 43 ccgtcgccatggccgccgcagccgc 67 |||||| |||||||||||||||||| Sbjct: 2006105 ccgtcggcatggccgccgcagccgc 2006129
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 gaccgtcgccatggccgccgc 61 ||||||||||||||||||||| Sbjct: 1174716 gaccgtcgccatggccgccgc 1174696
>ref|NM_009233.1| Mus musculus SRY-box containing gene 1 (Sox1), mRNA Length = 1176 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 1092 ggccgccgcagccgctgccgc 1072
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 136988 ggccgccgcagccgctgccgc 137008
>emb|X94126.1|MMSOX1 M.musculus SOX1 gene Length = 2376 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 1527 ggccgccgcagccgctgccgc 1507
>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09, complete sequence Length = 123375 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgca 74 ||||||||||||||||||||| Sbjct: 25565 gccgccgcagccgctgccgca 25585
>emb|AJ010302.1|RSP010302 Rhodobacter sphaeroides photosynthetic gene cluster Length = 40707 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 ccgtcgccatggccgccgcagccgc 67 |||||| |||||||||||||||||| Sbjct: 15098 ccgtcggcatggccgccgcagccgc 15074
>gb|DQ027015.1| Chlamydomonas reinhardtii MCD1 (MCD1) mRNA, complete cds Length = 5213 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgca 74 ||||||||||||||||||||| Sbjct: 2865 gccgccgcagccgctgccgca 2885
>gb|AC023741.4| Drosophila melanogaster X BAC RP98-23O9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 73851 ggccgccgcagccgctgccgc 73871
>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187921 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 9045 ggccgccgcagccgctgccgc 9065
>gb|AC104376.6| Homo sapiens chromosome 8, clone CTD-2242O8, complete sequence Length = 203348 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 tgaaaggagagagcttggatt 354 ||||||||||||||||||||| Sbjct: 74320 tgaaaggagagagcttggatt 74300
>ref|NM_167335.1| Drosophila melanogaster Smrter CG4013-RC, transcript variant C (Smr), mRNA Length = 13475 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 2216 ggccgccgcagccgctgccgc 2196
>ref|NM_167334.1| Drosophila melanogaster Smrter CG4013-RB, transcript variant B (Smr), mRNA Length = 12702 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 1443 ggccgccgcagccgctgccgc 1423
>ref|NM_080536.2| Drosophila melanogaster Smrter CG4013-RA, transcript variant A (Smr), mRNA Length = 12622 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 1363 ggccgccgcagccgctgccgc 1343
>gb|AF195122.1| Rhodobacter sphaeroides photosynthetic gene cluster, partial sequence Length = 66280 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 ccgtcgccatggccgccgcagccgc 67 |||||| |||||||||||||||||| Sbjct: 40150 ccgtcggcatggccgccgcagccgc 40126
>tpg|BK005744.1| TPA: TPA_exp: Drosophila melanogaster dosage compensation complex binding fragment 12, complete sequence Length = 5163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 2234 ggccgccgcagccgctgccgc 2254
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgca 74 ||||||||||||||||||||| Sbjct: 8412190 gccgccgcagccgctgccgca 8412210
>gb|AC023842.5|AC023842 Homo sapiens chromosome 8, clone RP11-374M4, complete sequence Length = 187351 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 tgaaaggagagagcttggatt 354 ||||||||||||||||||||| Sbjct: 9732 tgaaaggagagagcttggatt 9752
>gb|AC157276.2| Mus musculus BAC clone RP23-426N20 from chromosome 12, complete sequence Length = 220385 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 392 attgcttcctgatgattctgcaaag 416 |||||||| |||||||||||||||| Sbjct: 41328 attgcttcatgatgattctgcaaag 41352
>dbj|AB108672.1| Mus musculus Sox1 mRNA for transcriptional factor SOX1, complete cds Length = 1220 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 1131 ggccgccgcagccgctgccgc 1111
>dbj|AK120819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015E20, full insert sequence Length = 2975 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgca 74 ||||||||||||||||||||| Sbjct: 386 gccgccgcagccgctgccgca 406
>dbj|AK120245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044J21, full insert sequence Length = 5429 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgca 74 ||||||||||||||||||||| Sbjct: 395 gccgccgcagccgctgccgca 415
>gb|AF175223.1|AF175223 Drosophila melanogaster SANT domain protein SMRTER (Smrter) mRNA, complete cds Length = 11296 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 756 ggccgccgcagccgctgccgc 736
>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete sequence Length = 302665 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccgc 73 ||||||||||||||||||||| Sbjct: 90972 ggccgccgcagccgctgccgc 90992
>gb|AY665388.1| Drosophila lutescens CG4928 mRNA, partial cds Length = 1545 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 1480 gccgccgcagccgctgccgc 1499
>gb|AY665386.1| Drosophila teissieri CG4928 mRNA, partial cds Length = 1542 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 1477 gccgccgcagccgctgccgc 1496
>ref|NM_187466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1560 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 42 accgtcgccatggccgccgcagccgctgccgc 73 ||||||| ||| |||||||| ||||||||||| Sbjct: 213 accgtcgtcatcgccgccgccgccgctgccgc 182
>ref|NM_190327.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1638 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accgtcgccatggccgccgc 61 |||||||||||||||||||| Sbjct: 1237 accgtcgccatggccgccgc 1256
>ref|NM_191857.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 447 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 303 gccgccgcagccgctgccgc 284
>ref|XM_469421.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2667 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 30 gccgccgcagccgctgccgc 49
>gb|AC145322.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0096N19, complete sequence Length = 178671 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 47 cgccatggccgccgcagccgctgccgcaccgg 78 ||||||||||||||| ||||| ||| |||||| Sbjct: 103798 cgccatggccgccgccgccgcggcctcaccgg 103829
>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16 map S2606, complete sequence Length = 124140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 104806 gccgccgcagccgctgccgc 104825
>ref|XM_587292.2| PREDICTED: Bos taurus GABA transporter GAT-1 homolog (LOC407118), mRNA Length = 4183 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 gaagcagttttccgaggagc 435 |||||||||||||||||||| Sbjct: 2645 gaagcagttttccgaggagc 2626
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggccgccgcagccgctgcc 71 |||||||||||||||||||| Sbjct: 175085 tggccgccgcagccgctgcc 175066
>ref|XM_868658.1| PREDICTED: Bos taurus similar to Tumor suppressor candidate 2 (PDGFA-associated protein 2) (Fus-1 protein) (Fusion 1 protein) (LOC616600), mRNA Length = 736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 130 gccgccgcagccgctgccgc 111
>ref|XM_618161.2| PREDICTED: Bos taurus similar to serine palmitoyltransferase, long chain base subunit 2 (LOC537972), mRNA Length = 2387 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccg 72 |||||||||||||||||||| Sbjct: 453 ggccgccgcagccgctgccg 472
>ref|XM_848207.1| PREDICTED: Canis familiaris similar to guanine nucleotide exchange factor p532 (LOC610665), mRNA Length = 2031 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ggccgccgcagccgctgccg 72 |||||||||||||||||||| Sbjct: 13 ggccgccgcagccgctgccg 32
>ref|XM_849545.1| PREDICTED: Canis familiaris similar to RAP2B, member of RAS oncogene family (LOC611828), mRNA Length = 874 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 cgctgacctccacctccgagcccc 132 ||||||||||| |||||||||||| Sbjct: 685 cgctgacctccccctccgagcccc 708
>emb|CR727101.2|CNS0GNZ7 Tetraodon nigroviridis full-length cDNA Length = 1043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctccccgaaagaaaatctgc 102 |||||||||||||||||||| Sbjct: 30 ctccccgaaagaaaatctgc 11
>emb|CR727021.2|CNS0GNWZ Tetraodon nigroviridis full-length cDNA Length = 1057 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctccccgaaagaaaatctgc 102 |||||||||||||||||||| Sbjct: 45 ctccccgaaagaaaatctgc 26
>emb|CR713421.2|CNS0GDFD Tetraodon nigroviridis full-length cDNA Length = 881 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctccccgaaagaaaatctgc 102 |||||||||||||||||||| Sbjct: 45 ctccccgaaagaaaatctgc 26
>emb|CR700619.2|CNS0G3JR Tetraodon nigroviridis full-length cDNA Length = 1036 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctccccgaaagaaaatctgc 102 |||||||||||||||||||| Sbjct: 25 ctccccgaaagaaaatctgc 6
>gb|BT010241.1| Drosophila melanogaster RE43738 full insert cDNA Length = 3133 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2075 gccgccgcagccgctgccgc 2056
>gb|AC084859.7| Homo sapiens chromosome 11, clone CTC-497E21, complete sequence Length = 172345 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 gaaaggagagagcttggatt 354 |||||||||||||||||||| Sbjct: 57047 gaaaggagagagcttggatt 57028
>gb|BC047888.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone IMAGE:5496307), containing frame-shift errors Length = 1920 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 99 gccgccgcagccgctgccgc 80
>emb|AL662864.14| Human DNA sequence from clone RP11-493K23 on chromosome X Contains two novel genes, two novel genes similar to poly(A) binding protein cytoplasmic 1 (LOC340530, LOC340529) and two CpG islands, complete sequence Length = 120769 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 88733 gccgccgcagccgctgccgc 88752 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 12236 gccgccgcagccgctgccgc 12217
>gb|BC038988.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone IMAGE:5787152), containing frame-shift errors Length = 1911 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 86 gccgccgcagccgctgccgc 67
>gb|BT010035.1| Drosophila melanogaster LD47819 full insert cDNA Length = 6628 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 3112 gccgccgcagccgctgccgc 3131
>emb|X76210.1|DMUBXGENE D.melanogaster mRNA for homeotic ultrabithorax protein Length = 4543 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2302 gccgccgcagccgctgccgc 2283
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 catggccgccgcagccgctg 69 |||||||||||||||||||| Sbjct: 39695 catggccgccgcagccgctg 39714
>emb|AL162973.1|ATF9G14 Arabidopsis thaliana DNA chromosome 5, BAC clone F9G14 (ESSA project) Length = 104769 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 264 aggcccgcctggtacaaggagaaggtttacccacagaacaaggt 307 ||||| || |||||||||||||| || || ||| |||||||||| Sbjct: 29009 aggcctgcttggtacaaggagaaagtatatccagagaacaaggt 29052
>emb|CR392021.10| Zebrafish DNA sequence from clone CH211-126H20 in linkage group 5, complete sequence Length = 182008 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 caggaattacaagggtttgc 225 |||||||||||||||||||| Sbjct: 98146 caggaattacaagggtttgc 98127
>gb|BC035266.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone MGC:42948 IMAGE:4837491), complete cds Length = 3255 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 116 gccgccgcagccgctgccgc 97
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accgtcgccatggccgccgc 61 |||||||||||||||||||| Sbjct: 110255 accgtcgccatggccgccgc 110274
>ref|NM_206497.1| Drosophila melanogaster Ultrabithorax CG10388-RF, transcript variant F (Ubx), mRNA Length = 4627 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2200 gccgccgcagccgctgccgc 2181
>ref|NM_169730.1| Drosophila melanogaster Ultrabithorax CG10388-RC, transcript variant C (Ubx), mRNA Length = 4678 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2251 gccgccgcagccgctgccgc 2232
>ref|NM_169729.1| Drosophila melanogaster Ultrabithorax CG10388-RE, transcript variant E (Ubx), mRNA Length = 4702 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2275 gccgccgcagccgctgccgc 2256
>ref|NM_169728.1| Drosophila melanogaster Ultrabithorax CG10388-RD, transcript variant D (Ubx), mRNA Length = 4651 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2224 gccgccgcagccgctgccgc 2205
>ref|NM_167685.1| Drosophila melanogaster CG12701-RB, transcript variant B (CG12701), mRNA Length = 6597 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 3099 gccgccgcagccgctgccgc 3118
>ref|NM_167521.2| Drosophila melanogaster hangover CG32575-RA, transcript variant A (hang), mRNA Length = 6907 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggccgccgcagccgctgcc 71 |||||||||||||||||||| Sbjct: 1571 tggccgccgcagccgctgcc 1552
>ref|NM_167520.2| Drosophila melanogaster hangover CG32575-RB, transcript variant B (hang), mRNA Length = 6860 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggccgccgcagccgctgcc 71 |||||||||||||||||||| Sbjct: 1571 tggccgccgcagccgctgcc 1552
>gb|AC003105.3| Arabidopsis thaliana chromosome 2 clone F18A8 map B68, complete sequence Length = 95167 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 atgttgcagaggaaactgtt 515 |||||||||||||||||||| Sbjct: 11056 atgttgcagaggaaactgtt 11075
>ref|NM_134512.4| Drosophila melanogaster CG12701-RA, transcript variant A (CG12701), mRNA Length = 6610 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 3112 gccgccgcagccgctgccgc 3131
>ref|NM_080504.2| Drosophila melanogaster Ultrabithorax CG10388-RA, transcript variant A (Ubx), mRNA Length = 4729 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2302 gccgccgcagccgctgccgc 2283
>ref|NM_080500.2| Drosophila melanogaster Ultrabithorax CG10388-RB, transcript variant B (Ubx), mRNA Length = 4600 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 2173 gccgccgcagccgctgccgc 2154
>ref|NM_079985.2| Drosophila melanogaster bonus CG5206-RA (bon), mRNA Length = 5789 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccatggccgccgcagccgc 67 |||||||||||||||||||| Sbjct: 2660 gccatggccgccgcagccgc 2641
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 42 accgtcgccatggccgccgcagccgctgccgc 73 ||||||| ||| |||||||| ||||||||||| Sbjct: 23048 accgtcgtcatcgccgccgccgccgctgccgc 23017
>dbj|AK046537.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:B330018M03 product:Hypothetical fibronectin type III structure containing protein, full insert sequence Length = 2144 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 87 gccgccgcagccgctgccgc 68
>gb|AF210315.1|AF210315 Drosophila melanogaster bonus (bon) mRNA, complete cds Length = 5811 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccatggccgccgcagccgc 67 |||||||||||||||||||| Sbjct: 2672 gccatggccgccgcagccgc 2653
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 176488 gccgccgcagccgctgccgc 176469
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 47 cgccatggccgccgcagccgctgccgcaccgg 78 ||||||||||||||| ||||| ||| |||||| Sbjct: 4727876 cgccatggccgccgccgccgcggcctcaccgg 4727845
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accgtcgccatggccgccgc 61 |||||||||||||||||||| Sbjct: 39308549 accgtcgccatggccgccgc 39308568 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 30334667 gccgccgcagccgctgccgc 30334686 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accgtcgccatggccgccgc 61 |||||||||||||||||||| Sbjct: 1136614 accgtcgccatggccgccgc 1136633
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggccgccgcagccgctgcc 71 |||||||||||||||||||| Sbjct: 79131 tggccgccgcagccgctgcc 79112
>gb|BC091649.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone IMAGE:6650796), partial cds Length = 1910 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 83 gccgccgcagccgctgccgc 64
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone BACR48P17, complete sequence Length = 176195 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 59848 gccgccgcagccgctgccgc 59829
>gb|AC011616.5|AC011616 Drosophila melanogaster, chromosome 3R, region 89D-89E, BAC clone BACR48L13, complete sequence Length = 168666 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 141579 gccgccgcagccgctgccgc 141598
>gb|AC007771.7|AC007771 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR26M03, complete sequence Length = 197071 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccatggccgccgcagccgc 67 |||||||||||||||||||| Sbjct: 18470 gccatggccgccgcagccgc 18451
>gb|AC007757.5|AC007757 Drosophila melanogaster, chromosome 3R, region 92E-92F, BAC clone BACR13J19, complete sequence Length = 170939 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccatggccgccgcagccgc 67 |||||||||||||||||||| Sbjct: 130442 gccatggccgccgcagccgc 130423
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 122986 gccgccgcagccgctgccgc 123005
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 20394 gccgccgcagccgctgccgc 20413
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gccgcagccgctgccgcacc 76 |||||||||||||||||||| Sbjct: 171782 gccgcagccgctgccgcacc 171763
>gb|AC013394.12| Homo sapiens chromosome 15, clone RP11-437B10, complete sequence Length = 182320 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 158796 gccgccgcagccgctgccgc 158777
>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551C06 Length = 149829 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accgtcgccatggccgccgc 61 |||||||||||||||||||| Sbjct: 89795 accgtcgccatggccgccgc 89814
>ref|NM_178699.2| Mus musculus RIKEN cDNA B930041F14 gene (B930041F14Rik), mRNA Length = 2144 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 87 gccgccgcagccgctgccgc 68
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ccatggccgccgcagccgctgccg 72 ||||||||||||||||||| |||| Sbjct: 70921 ccatggccgccgcagccgccgccg 70944
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ccatggccgccgcagccgctgccg 72 ||||||||||||||||||| |||| Sbjct: 27471 ccatggccgccgcagccgccgccg 27494
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 accgtcgccatggccgccgc 61 |||||||||||||||||||| Sbjct: 105928 accgtcgccatggccgccgc 105947
>gb|AC005776.1|AC005776 Homo sapiens chromosome 19, cosmid R28550, complete sequence Length = 40883 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 21367 gccgccgcagccgctgccgc 21386
>ref|XM_554136.1| Anopheles gambiae str. PEST ENSANGP00000028767 (ENSANGG00000002343), partial mRNA Length = 549 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 455 gccgccgcagccgctgccgc 436
>ref|XM_319410.2| Anopheles gambiae str. PEST ENSANGP00000002836 (ENSANGG00000002343), partial mRNA Length = 1545 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 1451 gccgccgcagccgctgccgc 1432
>dbj|AK106206.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-G02, full insert sequence Length = 1044 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cgtcgccatggccgccgcagccgc 67 |||||||||||||||||| ||||| Sbjct: 60 cgtcgccatggccgccgccgccgc 83
>dbj|AK066971.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089C22, full insert sequence Length = 4127 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 98 gccgccgcagccgctgccgc 117
>dbj|AK066769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082M21, full insert sequence Length = 831 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cgtcgccatggccgccgcagccgc 67 |||||||||||||||||| ||||| Sbjct: 51 cgtcgccatggccgccgccgccgc 74
>dbj|AK066190.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056G16, full insert sequence Length = 807 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cgtcgccatggccgccgcagccgc 67 |||||||||||||||||| ||||| Sbjct: 58 cgtcgccatggccgccgccgccgc 81
>gb|AF132475.1|AF132475 Arabidopsis thaliana cultivar Col-0 heme oxygenase 1 (HO1) gene, nuclear gene encoding chloroplast protein, complete cds Length = 3270 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 atgttgcagaggaaactgtt 515 |||||||||||||||||||| Sbjct: 361 atgttgcagaggaaactgtt 380
>gb|AE003731.3| Drosophila melanogaster chromosome 3R, section 69 of 118 of the complete sequence Length = 230001 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 gccatggccgccgcagccgc 67 |||||||||||||||||||| Sbjct: 84685 gccatggccgccgcagccgc 84666
>gb|AE003714.2| Drosophila melanogaster chromosome 3R, section 52 of 118 of the complete sequence Length = 231130 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 90150 gccgccgcagccgctgccgc 90169
>gb|AF099983.1|DSIMUBX4 Drosophila simulans Ultrabithorax gene, exon 4 and complete cds Length = 397 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 339 gccgccgcagccgctgccgc 320
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete sequence Length = 207432 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 79987 gccgccgcagccgctgccgc 79968
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tggccgccgcagccgctgcc 71 |||||||||||||||||||| Sbjct: 98413 tggccgccgcagccgctgcc 98394
>emb|X05727.1|DMUBX5 Drosophila melanogaster Ubx gene for Ultrabithorax, exon 4 Length = 3236 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 1953 gccgccgcagccgctgccgc 1934
>emb|AL670236.9| Mouse DNA sequence from clone RP23-242K15 on chromosome 4, complete sequence Length = 232950 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 1016 gccgccgcagccgctgccgc 997
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 47 cgccatggccgccgcagccgctgccgcaccgg 78 ||||||||||||||| ||||| ||| |||||| Sbjct: 4746660 cgccatggccgccgccgccgcggcctcaccgg 4746629
>gb|L48177.1|L48177 Drosophila melanogaster DNA sequence (P1 DS03126 (D5)), complete sequence Length = 97852 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 8526 gccgccgcagccgctgccgc 8545
>emb|AL135750.5|HSO20 Homo sapiens chromosome X sequence from BAC CEPHB20O20 region PHKA1-DXS227 map Xq13, complete sequence Length = 115637 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 92169 gccgccgcagccgctgccgc 92188 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 15729 gccgccgcagccgctgccgc 15710
>gb|AC132365.4| Mus musculus BAC clone RP23-459M5 from 6, complete sequence Length = 162524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 tggccctttcttccttggcc 578 |||||||||||||||||||| Sbjct: 135280 tggccctttcttccttggcc 135299
>gb|BC067129.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone IMAGE:6138785), partial cds Length = 1888 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 67 gccgccgcagccgctgccgc 48
>gb|U31961.1|DMU31961 Drosophila melanogaster bithorax complex (BX-C), complete sequence Length = 338234 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 318494 gccgccgcagccgctgccgc 318475
>gb|AC163341.5| Mus musculus BAC clone RP24-138G13 from chromosome 6, complete sequence Length = 179417 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 tggccctttcttccttggcc 578 |||||||||||||||||||| Sbjct: 34998 tggccctttcttccttggcc 35017
>emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on chromosome 4, complete sequence Length = 193847 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gccgccgcagccgctgccgc 73 |||||||||||||||||||| Sbjct: 192863 gccgccgcagccgctgccgc 192844
>emb|AL645508.14| Mouse DNA sequence from clone RP23-170H12 on chromosome 4, complete sequence Length = 207485 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 attgcttcctgatgattctg 411 |||||||||||||||||||| Sbjct: 139921 attgcttcctgatgattctg 139902
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 cgtcgccatggccgccgcagccgc 67 |||||||||||||||||| ||||| Sbjct: 38595 cgtcgccatggccgccgccgccgc 38572
>dbj|AB021857.1| Arabidopsis thaliana HY1 gene for plastid heme oxygenase, complete cds Length = 2867 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 atgttgcagaggaaactgtt 515 |||||||||||||||||||| Sbjct: 284 atgttgcagaggaaactgtt 303 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,853,095 Number of Sequences: 3902068 Number of extensions: 4853095 Number of successful extensions: 98936 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 155 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97738 Number of HSP's gapped (non-prelim): 1198 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
