ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23c06 |
|---|---|
| Clone Library Name | barley_pub |
>TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein| Length = 507 Score = 119 bits (297), Expect = 9e-27 Identities = 59/127 (46%), Positives = 85/127 (66%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E ++L L+ +++V ++NY++S T +F GHLG+L+LA AS+ GIQ AYG+MLGM Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMA 110 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 SAV+T+CGQAYGA ++ +GI QR+ VL +A + L LY +S PIL + +S IA Sbjct: 111 SAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHE 170 Query: 574 AAIFVYG 594 IF G Sbjct: 171 GQIFARG 177
>YD338_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7 intergenic| region Length = 695 Score = 72.8 bits (177), Expect = 7e-13 Identities = 36/125 (28%), Positives = 67/125 (53%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E R+L + P + +++ + M + GHLG ELAA SL + + + G+ Sbjct: 228 EARVLASYSFPLIFTFLLEQIFPMVCSLTVGHLGKNELAAVSLASMTSNI-TLAIFEGIA 286 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 ++++TLC QAYG+ +F +G+++QR + IP AV++ +S P+L + E+ Sbjct: 287 TSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINL 346 Query: 574 AAIFV 588 + F+ Sbjct: 347 TSRFL 351
>YAO6_SCHPO (Q10085) Hypothetical protein C11D3.06 in chromosome I| Length = 455 Score = 69.3 bits (168), Expect = 8e-12 Identities = 39/125 (31%), Positives = 69/125 (55%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E++ L+ +AP +L Y + + S+ I G LG EL+ A+ + + LG Sbjct: 7 EVKYLLINSAPVILGYALQNSLQTSSVIVTGRLGPSELSVAAFAYMFAMSTGWLIALGGT 66 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 +A +TL +GA K LGI +Q ++L +P+ +++ +S+PILI L ++PE+A A Sbjct: 67 TAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEA 126 Query: 574 AAIFV 588 + F+ Sbjct: 127 SQKFL 131
>YHJ2_YEAST (P38767) Hypothetical 64.2 kDa protein in SLT2-PUT2 intergenic| region Length = 581 Score = 68.6 bits (166), Expect = 1e-11 Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E +++ A P + +++ +S+++ HLGT EL +LG+ + + G+ Sbjct: 164 ETQVITMNALPLIFTFILQNSLSLASIFSVSHLGTKELGGVTLGSMTANITGLAAIQGLC 223 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLA-VLYAFSRPILILLSESPEIAR 570 + ++TLC QAYGA + ++G+ +QR V+ + +P+ V + +S IL L+ E+ Sbjct: 224 TCLDTLCAQAYGAKNYHLVGVLVQRCAVITILAFLPMMYVWFVWSEKILALMIPERELCA 283 Query: 571 AAAIFV 588 AA ++ Sbjct: 284 LAANYL 289 Score = 38.1 bits (87), Expect = 0.019 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Frame = +1 Query: 220 RMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSA 399 R ++ LA P V++ +L IFA HLGT L A S+ T I AY + + + Sbjct: 395 RKMINLAIPGVVMVEAEFLGFEVLTIFASHLGTDALGAQSIVAT-IASLAYQVPFSISVS 453 Query: 400 VETLCGQAYGANKFDMLGIYMQRSTVL-LMATGIPLAVLYAFSRPILILLSESPEIAR 570 T GA+ +D I + S +L + + + + V+ + I L S + + Sbjct: 454 TSTRVANFIGASLYDSCMITCRVSLLLSFVCSSMNMFVICRYKEQIASLFSTESAVVK 511
>PMPM_PSEAE (Q9I3Y3) Multidrug resistance protein pmpM (H(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 477 Score = 49.7 bits (117), Expect = 6e-06 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 2/129 (1%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E++ L+ LAAP ++ + M + AG +LAA +LGN+ I + + LM G Sbjct: 17 ELKELLTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNS-IWIPMFLLMTGTL 75 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPL--AVLYAFSRPILILLSESPEIA 567 A Q +GA G ++++ L + G PL AVL+ S PIL L+ PE+ Sbjct: 76 LATTAKVAQRHGAGDQPGTGPLVRQALWLALLIG-PLSGAVLWWLSEPILGLMKVRPELI 134 Query: 568 RAAAIFVYG 594 + +++ G Sbjct: 135 GPSLLYLKG 143
>NORM_AZOSE (Q5NYX9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 463 Score = 49.3 bits (116), Expect = 8e-06 Identities = 30/110 (27%), Positives = 57/110 (51%) Frame = +1 Query: 238 AAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVETLCG 417 A P ++ +++ M ++ + G GTL+LAA ++G +G+ + L++G+ AV Sbjct: 26 AWPVLVAQLLSMSMLIADTVITGRYGTLDLAAVAVG-SGVYISIVMLLVGVLQAVAPTVA 84 Query: 418 QAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIA 567 +GA + D +G +Q+ L + +P L AF +L L S ++A Sbjct: 85 HHFGARRVDAIGPALQQGFWLALMLALPGIALLAFPGFLLELSSVPADVA 134
>NORM_PSEAE (Q9HTR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 488 Score = 48.1 bits (113), Expect = 2e-05 Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 5/138 (3%) Frame = +1 Query: 193 MLAATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTG---IQV 363 M + + VE++ ++RLA P + + M + + G LG LAA LG + Sbjct: 1 MSSPSLVELKAILRLAGPLIAAQLAYVAMVFTDTVMMGKLGPDALAAGGLGAVSYAFVST 60 Query: 364 FAYGLMLGMGS--AVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPIL 537 F G++ +G+ A+ C A GA G+++ L +A G+ L L RP+L Sbjct: 61 FCVGVVAAVGNLVAIRHGCDDAAGAAAAARSGLWV--GAALALAAGLLLWNL----RPLL 114 Query: 538 ILLSESPEIARAAAIFVY 591 ++ ++P+ A F++ Sbjct: 115 LVFGQAPQTVDGAMQFLH 132
>NORM_PSEPK (Q88CB9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 462 Score = 47.4 bits (111), Expect = 3e-05 Identities = 36/132 (27%), Positives = 57/132 (43%) Frame = +1 Query: 193 MLAATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAY 372 M A E++ L+RLA P + + + LM ++ + + LA LG F Sbjct: 1 MHVAPTTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYS-FVS 59 Query: 373 GLMLGMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSE 552 LG+ +AV TL GAN + Q L A + A++ P+L+L + Sbjct: 60 IFCLGVIAAVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQ 119 Query: 553 SPEIARAAAIFV 588 PE +AA F+ Sbjct: 120 KPENVASAAEFL 131 Score = 31.6 bits (70), Expect = 1.8 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 2/124 (1%) Frame = +1 Query: 178 PWARRMLAATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGI 357 P + + + +R L RL P YM+ + + G LG+ ELAA + + Sbjct: 222 PLRKGLSRPSLAALRELWRLGLPIGGTYMVEVGLFAFAALCMGVLGSTELAAHQI---AL 278 Query: 358 QVFAYGLML--GMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRP 531 Q+ + M+ G+ AV G YGA G + + + G +++AF+ Sbjct: 279 QIVSTAFMVPTGLSYAVTMRVGLYYGA------GNLLAARSAGRVGIGFGAMIMFAFATL 332 Query: 532 ILIL 543 L+L Sbjct: 333 FLLL 336
>NORM_BURPS (Q63S57) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 468 Score = 45.8 bits (107), Expect = 9e-05 Identities = 31/113 (27%), Positives = 50/113 (44%) Frame = +1 Query: 232 RLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVETL 411 RLAAP + + MS++ + G LG LAA LG + L+ G+ ++V Sbjct: 26 RLAAPLAIAQLSQMAMSVTDTVLLGSLGPDALAAGGLG-ANLSFVVVTLLQGVLTSVSVS 84 Query: 412 CGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIAR 570 A GA D + L + +P L +F++P+L+ E +AR Sbjct: 85 VAHARGAMAEDRVPHIYWTGFALSLLLAVPAFALLSFAQPLLLAFGEPAALAR 137
>NORM_BURVI (Q9F5N7) Multidrug resistance protein norM (Multidrug-efflux| transporter) Length = 462 Score = 45.8 bits (107), Expect = 9e-05 Identities = 33/113 (29%), Positives = 50/113 (44%) Frame = +1 Query: 232 RLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVETL 411 RLAAP + + MS++ + G LG LAA LG V ++ G+ S+V Sbjct: 25 RLAAPLAIAQLSQMAMSVTDTVLLGSLGPDSLAAGGLGANFFFVIV-TVLQGVLSSVSVS 83 Query: 412 CGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIAR 570 A GA + VL + IP V + S P+L++ E P +A+ Sbjct: 84 VAHARGAQAEHRVPHIYWTGFVLSVLLAIPAVVALSLSEPLLLMFHEPPTLAQ 136
>NORM_BURMA (Q62LW6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 468 Score = 44.7 bits (104), Expect = 2e-04 Identities = 31/113 (27%), Positives = 50/113 (44%) Frame = +1 Query: 232 RLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVETL 411 RLAAP + + MS++ + G LG LAA LG + L+ G+ ++V Sbjct: 26 RLAAPLAIAQLSQMAMSVTDTVLLGSLGPDALAAGGLG-ANLFFVVVTLLQGVLTSVSVS 84 Query: 412 CGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIAR 570 A GA D + L + +P L +F++P+L+ E +AR Sbjct: 85 VAHARGAMAEDRVPHIYWTGFALSLLLAVPAFALLSFAQPLLLAFGEPAALAR 137
>NORM_XYLFT (Q879Z5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/126 (26%), Positives = 61/126 (48%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E+R + LA P VL ++ L+ + AGH T+ LAA+++G T + + +G Sbjct: 29 EVRPTLLLALPLVLGHVSTGLIGFVLNVIAGHHSTVTLAASTIG-TALLWLPMLVPMGTL 87 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 ++ L Q +GA + +G +++ L M G+ + + +L L P+I Sbjct: 88 ISLTVLVSQLHGAERERDIGPLFRQALWLAMLLGLVMFTFLSVVPALLPLFGIVPDIVPG 147 Query: 574 AAIFVY 591 AA F++ Sbjct: 148 AAKFLH 153
>NORM_XYLFA (Q9PA34) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 44.7 bits (104), Expect = 2e-04 Identities = 33/126 (26%), Positives = 61/126 (48%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E+R + LA P VL ++ L+ + AGH T+ LAA+++G T + + +G Sbjct: 29 EVRPTLLLALPLVLGHVSTGLIGFVLNVIAGHHSTVTLAASTIG-TALLWLPMLVPMGTL 87 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 ++ L Q +GA + +G +++ L M G+ + + +L L P+I Sbjct: 88 ISLTVLVSQLHGAERERDIGPLFRQALWLAMLLGLVMFTFLSVVPALLPLFGIVPDIVPG 147 Query: 574 AAIFVY 591 AA F++ Sbjct: 148 AAKFLH 153
>NORM_BRAJA (Q89W72) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 466 Score = 44.7 bits (104), Expect = 2e-04 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 1/123 (0%) Frame = +1 Query: 229 VRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQV-FAYGLMLGMGSAVE 405 +RLA P +L + M + G LG +AAA+L +T V F +GL G+ +AV Sbjct: 30 LRLAVPMMLTQLGQIAMITTDLALIGRLGEDAVAAAALAHTVYFVSFTFGL--GLMAAVS 87 Query: 406 TLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARAAAIF 585 L QA+GA + ++ + + +P+ + ILI L + P+ A A + Sbjct: 88 PLVAQAFGAGDVRRIRRALRVGLWVALLISLPMMASPLYGEHILIALGQVPQSAALAQRY 147 Query: 586 VYG 594 + G Sbjct: 148 LNG 150
>NORM_RHOPA (Q6NB79) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 474 Score = 43.5 bits (101), Expect = 5e-04 Identities = 33/132 (25%), Positives = 60/132 (45%) Frame = +1 Query: 199 AATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGL 378 +A E+ + LA P L + M + G LG +AAA+L + + + + Sbjct: 23 SAWRTELIETLWLAWPMALTQLGQIAMMTTDLALIGRLGDAAVAAAALAHF-VLFSTFTM 81 Query: 379 MLGMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESP 558 LG+ SAV L QA+GA + ++ + G+PL + + +L+ L ++P Sbjct: 82 GLGLVSAVTPLAAQAFGARAPRQVRASLRVGLWAGVIAGVPLTLGQLYGEELLVALGQNP 141 Query: 559 EIARAAAIFVYG 594 +R A ++ G Sbjct: 142 ATSRLAGDYLDG 153
>NORM_IDILO (Q5QWR6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 462 Score = 43.1 bits (100), Expect = 6e-04 Identities = 32/123 (26%), Positives = 57/123 (46%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E L +L P ++ + LMS+ + AG G L+LAA S+G + I V A L+ G+ Sbjct: 10 EFNKLAKLTGPILVAQLTQMLMSVVDTVMAGRKGALDLAAVSVGGS-IFVPATLLVFGLA 68 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 A+ + G+N + +Q+ G+ + ++ S P L+ + E + RA Sbjct: 69 LALAPIISHLDGSNSHRRIANILQQGLYACAIVGV-ITLIGMSSAPWLLDIMEVEDDFRA 127 Query: 574 AAI 582 + Sbjct: 128 ITL 130
>NORM_DEIRA (Q9RY44) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 451 Score = 42.4 bits (98), Expect = 0.001 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 5/115 (4%) Frame = +1 Query: 202 ATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLM 381 +T E+R L+RLA P V+ +++ G LG ELAAA+ N + + ++ Sbjct: 10 STTAELRALLRLAGPVVVSQFAANALALIATAVIGRLGERELAAAAYANAAYYL-VFIMV 68 Query: 382 LGMGSAVETLCGQAYGANKFDMLGIYMQ-----RSTVLLMATGIPLAVLYAFSRP 531 +G+ +V QA+GA D G+ R +LL A +PL +F P Sbjct: 69 VGVMLSVAPRVAQAHGAG--DARGVARALGGGLRLALLLSAVMLPLMWALSFVLP 121
>NORM_PSESM (Q88BA2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 42.0 bits (97), Expect = 0.001 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E+ +++RLA P + M + LM + + G +G LA LG ++ +G+ Sbjct: 8 ELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFISF-FCVGVM 66 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPL--AVLYAFSRPILILLSESPEIA 567 +AV TL +GA D G+ L +A G+ L A+L PIL+ L ++ Sbjct: 67 AAVGTLVSIRHGAG--DSEGVTRLTQAGLWLAWGMALIAALLLWNLEPILLQLGQAEANV 124 Query: 568 RAAAIFV 588 AA F+ Sbjct: 125 HMAAQFL 131
>NORM_XANAC (Q8PG07) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 40.8 bits (94), Expect = 0.003 Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 3/131 (2%) Frame = +1 Query: 208 AVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGI---QVFAYGL 378 A E+R LA P VL ++ L+ + AGH GT LAA ++G + + + G Sbjct: 15 ASEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLPMLVPIGT 74 Query: 379 MLGMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESP 558 ++ + ++V Q GA + +G +++ L + + V + P+L +P Sbjct: 75 LISLTASV----SQLLGAGREREIGPLFRQALWLSLGLSALMFVFLSVVPPLLPTFGIAP 130 Query: 559 EIARAAAIFVY 591 +I A F++ Sbjct: 131 DIVPGATAFLH 141
>MDTK_ERWCT (Q6D5W6) Multidrug resistance protein mdtK (Multidrug-efflux| transporter) Length = 457 Score = 40.8 bits (94), Expect = 0.003 Identities = 32/130 (24%), Positives = 61/130 (46%), Gaps = 4/130 (3%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNT---GIQVFAYGLML 384 E R L LA P ++ + M + I AG ++AA ++G + +F +GL+L Sbjct: 7 EARKLSALAVPVIIAQVSQTSMGVVDTIMAGAYSATDMAAVAVGTSIWLPAILFGHGLLL 66 Query: 385 GMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGI-PLAVLYAFSRPILILLSESPE 561 + V Q G+ + D + +++S L + + VLY I ++ ++SPE Sbjct: 67 ALTPVV----AQLNGSGRRDRISHQVRQSFFLAAIISVLTMLVLYQGEYAINLMSNDSPE 122 Query: 562 IARAAAIFVY 591 +A A +++ Sbjct: 123 LAAKAIGYLH 132
>NORM_XANCP (Q8P4E6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 39.7 bits (91), Expect = 0.007 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 3/131 (2%) Frame = +1 Query: 208 AVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGI---QVFAYGL 378 A E+R LA P VL ++ L+ + AGH GT LAA ++G + + + G Sbjct: 15 AAEVRTTGLLALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLPMLVPIGT 74 Query: 379 MLGMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESP 558 ++ + ++V Q GA + +G +++ L + G + P+L +P Sbjct: 75 LISLTASV----SQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVPPLLPTFGIAP 130 Query: 559 EIARAAAIFVY 591 +I A F++ Sbjct: 131 DIVPGATDFLH 141
>NORM_BRUSU (Q8G2I1) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 37.0 bits (84), Expect = 0.043 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLML--- 384 EM + ++L P + + ++ + IF G LG LA+A L + F + LM+ Sbjct: 23 EMVVALKLGWPLIFTNLSQAALTATDVIFIGRLGADTLASALLATS----FYHTLMIFSM 78 Query: 385 GMGSAVETLCGQAYGANKFDMLGIY--MQRSTVLLMATGIPLAVLYAFSRPILILLSESP 558 G+ SAV + A G N+ + + +++ + IPL V+ I + L + P Sbjct: 79 GLVSAVMPMIAIALGKNRHSVRDVRRTVRQGFWSAIMIVIPLWVVLWHCEEIFLFLGQRP 138 Query: 559 EIARAAAIFVY 591 +IA + F++ Sbjct: 139 DIAARSTDFMH 149
>NORM_BRUME (Q8YFD7) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 37.0 bits (84), Expect = 0.043 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLML--- 384 EM + ++L P + + ++ + IF G LG LA+A L + F + LM+ Sbjct: 23 EMVVALKLGWPLIFTNLSQAALTATDVIFIGRLGADTLASALLATS----FYHTLMIFSM 78 Query: 385 GMGSAVETLCGQAYGANKFDMLGIY--MQRSTVLLMATGIPLAVLYAFSRPILILLSESP 558 G+ SAV + A G N+ + + +++ + IPL V+ I + L + P Sbjct: 79 GLVSAVMPMIAIALGKNRHSVRDVRRTVRQGFWSAIMIVIPLWVVLWHCEEIFLFLGQRP 138 Query: 559 EIARAAAIFVY 591 +IA + F++ Sbjct: 139 DIAARSTDFMH 149
>NORM_CHRVO (Q7NXN3) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 465 Score = 36.6 bits (83), Expect = 0.056 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 3/139 (2%) Frame = +1 Query: 187 RRMLAATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVF 366 R A E R + LA P ++ + S + AG +GT +LAA SLG + + Sbjct: 7 RASRAEILAEARQIAGLALPMMVAQIAQVATSFVDTVMAGRVGTDDLAAVSLG-ASVFIT 65 Query: 367 AYGLMLGMGSAVETLCGQAYGANKFDMLGIYMQRSTVL---LMATGIPLAVLYAFSRPIL 537 Y ++G+ +A+ + G+ D + L LM + ++ P+ Sbjct: 66 VYVTLMGVVAALNPILSHHLGSR--DRRAFSRDAAQGLWFGLMLGALGAGLMLLLEAPLR 123 Query: 538 ILLSESPEIARAAAIFVYG 594 L P++ +F+ G Sbjct: 124 HWLHLPPDVTDKVMLFITG 142
>YPNP_BACSU (P54181) Hypothetical protein ypnP| Length = 445 Score = 36.2 bits (82), Expect = 0.074 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 1/116 (0%) Frame = +1 Query: 217 MRMLVRLAAPAVLVYMINYLMSMSTQIFAGHL-GTLELAAASLGNTGIQVFAYGLMLGMG 393 ++ LV + P +L + ++ G+L G L AA++ +T I + +LG+ Sbjct: 12 LKQLVLFSMPIMLGNALQVSFQFIDSLWIGNLLGAKALGAAAVSST-IVLTVLSFILGLN 70 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPE 561 +A T+ Q G + + Y+ VLL I F +L+ L ++PE Sbjct: 71 NATLTILSQQKGKDDIKGMASYINAFVVLLTGLSIGFGAAGFFLSELLLRLLKTPE 126
>NORM_AGRT5 (Q8UDF5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 465 Score = 36.2 bits (82), Expect = 0.074 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 4/126 (3%) Frame = +1 Query: 226 LVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVE 405 ++RL P + + + + I G +GT++LAA + + A+ + LG+ A Sbjct: 250 VLRLGLPISITILAEVTLFAAASILMGQIGTVQLAAHGIA-LQLASIAFMIPLGLSQAAT 308 Query: 406 TLCGQAYGANKFDMLGIYMQRSTVLL--MATGIPL--AVLYAFSRPILILLSESPEIARA 573 G A G F L R+++++ +A GI L +L+A L P++ A Sbjct: 309 VRVGVARGQGDFKNL----IRASIMIYAIACGIALCGGILFAAVPEFLAKWFLDPKLPEA 364 Query: 574 AAIFVY 591 A + Y Sbjct: 365 AEVLAY 370
>NORM_RHIME (Q92PZ0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 35.8 bits (81), Expect = 0.096 Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Frame = +1 Query: 220 RMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG-- 393 R + L P + + ++ + + G LG +LAA L QVF + G G Sbjct: 22 RASLYLGVPFIGAQLAQLAINTTDVLMVGQLGATQLAAIILAT---QVFFTIFIFGSGFA 78 Query: 394 SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEIARA 573 +AV + QA G + ++ +++ G+ A + + PIL+ + PE+A Sbjct: 79 NAVVPMVAQAQGRGDQVSVRRSVRMGMWVVLLYGVLTAPVLWMAEPILLFAGQKPEVAAL 138 Query: 574 AAIFVY 591 A +++ Sbjct: 139 AGEYLH 144 Score = 35.4 bits (80), Expect = 0.13 Identities = 24/96 (25%), Positives = 46/96 (47%) Frame = +1 Query: 226 LVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVE 405 +V L P + + + + G +GT+ELAA + + A+ + LG+ A Sbjct: 250 VVHLGIPISVTILAEVSLFTVASLLMGTIGTIELAAHGIALQFASI-AFMIPLGLAQAGT 308 Query: 406 TLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVL 513 G AYG+ DM+G+ +R+ + ++ G+ A + Sbjct: 309 VRIGLAYGSG--DMVGV--KRAAIAVLTLGVGFAAV 340
>NORM_ACIAD (Q6FEY7) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 449 Score = 35.8 bits (81), Expect = 0.096 Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 1/133 (0%) Frame = +1 Query: 196 LAATAVEMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYG 375 +A E++ L L P ++ + + I AGHL +LAA ++G G+ + Sbjct: 4 VAGFRFELKQLFHLMWPILITQFAQAGLGLIDTIMAGHLSANDLAAIAVG-VGLWMPVML 62 Query: 376 LMLGMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSES 555 L + A L +A GA + + + +++S + ++ G+ +A+L P L+ + Sbjct: 63 LFSAIMIATTPLVAEAKGARTPEHIPVIVRQSLWVAVSLGV-IAMLILQLMPFLLPILGV 121 Query: 556 PE-IARAAAIFVY 591 PE + A +F++ Sbjct: 122 PESLQPKAGLFLH 134
>NORM_PHOLL (Q7N1G0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 33.9 bits (76), Expect = 0.37 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNT---GIQVFAYGLML 384 E++ L+ + P ++ + MS + +GH T +LAA +LG++ I V YG ++ Sbjct: 9 ELKQLLFFSFPIIVSQIARTAMSFVDIVMSGHYATADLAAVTLGSSIWFPIFVLGYGTII 68 Query: 385 GMGSAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVL 513 + + V Q D L Y+ + +L IP+ +L Sbjct: 69 MLAADVAKQKAQHDDEGIKDSLKNYLFLAVIL----SIPIIIL 107
>NIP71_ARATH (Q8LAI1) Probable aquaporin NIP7.1 (NOD26-like intrinsic protein| 7.1) Length = 275 Score = 33.9 bits (76), Expect = 0.37 Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 7/152 (4%) Frame = +1 Query: 154 SILSDESVPWARRMLAATAVEMRM------LVRLAAPAVLVYMINYLMSMSTQIFAGHLG 315 S L DE P +R+ ++ + + L +L++ + ++S STQ+ GH+G Sbjct: 19 STLRDEDHPSRQRLFGCLPYDIDLNPLRIVMAELVGTFILMFSVCGVIS-STQLSGGHVG 77 Query: 316 TLELAAASLGNTGIQVFAYGLMLGMG-SAVETLCGQAYGANKFDMLGIYMQRSTVLLMAT 492 LE A + + + V++ G + G + T+ +G + + +Y+ T+ A Sbjct: 78 LLEYAVTAGLSVVVVVYSIGHISGAHLNPSITIAFAVFGGFPWSQVPLYITAQTLGATAA 137 Query: 493 GIPLAVLYAFSRPILILLSESPEIARAAAIFV 588 + +Y + I ++ P ++ +A FV Sbjct: 138 TLVGVSVYGVNADI---MATKPALSCVSAFFV 166
>NORM_CAUCR (P58163) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 33.1 bits (74), Expect = 0.62 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%) Frame = +1 Query: 226 LVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVF---AYGLMLGMGS 396 L+RLA P VL + +M ++ I GH +L ++ VF GL++G Sbjct: 32 LLRLAGPVVLSRLGIMVMGLTDAIVVGHFSAQQLGYHAMAWAPSSVFVTATVGLLVG--- 88 Query: 397 AVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILI 540 V+ + +A GA G ++R V G L A P+ + Sbjct: 89 -VQVMTARAMGAGNPHETGAVLRRGLVYAGWLGFGSMALLALFGPMFL 135
>Y709_METJA (Q58119) Hypothetical protein MJ0709| Length = 450 Score = 32.7 bits (73), Expect = 0.81 Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 14/135 (10%) Frame = +1 Query: 226 LVRLAAPAVLVYM---INYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGS 396 L+R+ P+ L+ + +++ + S + G L A G I F + MLG+ S Sbjct: 237 LIRVGIPSALIEITVAVSFFIMTSIIMMVGDSRGL---AVYTGALRITEFGFIPMLGLAS 293 Query: 397 AVETLCGQAYGANKFDML----------GIYMQRSTV-LLMATGIPLAVLYAFSRPILIL 543 ++ G YGA F+ L G+ M+ V L+M LA L+ +++ + + Sbjct: 294 GATSVIGATYGARSFEKLKTAYFYTIKIGVLMEIIIVALIMLLSPILAYLFTYTKTSMGI 353 Query: 544 LSESPEIARAAAIFV 588 E + R +++ Sbjct: 354 HEELVKALRIVPLYL 368
>NORM_THEMA (Q9WZS2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 464 Score = 32.7 bits (73), Expect = 0.81 Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%) Frame = +1 Query: 268 NYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLM--LGMGSAVETLCGQAYG-ANK 438 N++ S +FA L A + GI V + M G+ A+ TL G+ G NK Sbjct: 257 NFVFSTGVLMFANILLIAGAEAYAGHRIGINVESLSFMPAFGISVAITTLVGRYNGMGNK 316 Query: 439 FDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEI 564 +LG+ Q + L+ +++ F P++ + + P+I Sbjct: 317 EHVLGVIRQGWILSLLFQVTVGIIIFLFPEPLIRIFTSDPQI 358 Score = 31.6 bits (70), Expect = 1.8 Identities = 26/100 (26%), Positives = 39/100 (39%) Frame = +1 Query: 226 LVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVE 405 L++LA PA+ ++ L M+ F GH ++ L N V L+ A Sbjct: 22 LIKLALPAMGENVLQMLFGMADTAFLGHYSWKAMSGVGLSNQVFWVVQVVLIAASMGATV 81 Query: 406 TLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFS 525 T+ A GA + S L + TG+ L L S Sbjct: 82 TI-ANAIGAGNRKAVRSLAWNSVFLAIFTGVILTALTPLS 120
>NORM_VIBF1 (Q5E4Y6) Multidrug resistance protein norM (Na(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 460 Score = 32.7 bits (73), Expect = 0.81 Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 2/119 (1%) Frame = +1 Query: 214 EMRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMG 393 E+ L++L+ P ++ + M + AG + ++AA ++ + V+ ++ G+G Sbjct: 7 EIVRLIKLSTPVLIASVAQTGMGFVDTVMAGGVSATDMAAVAIAAS---VWLPSVLFGVG 63 Query: 394 --SAVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILILLSESPEI 564 A+ + Q G+ K + + + L + T IP+ ++ + I+ + PE+ Sbjct: 64 LLMALVPVVAQLNGSGKSKKVPFEIHQGVYLALLTSIPIMLVLYNAGFIIAAMDVEPEL 122
>KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A member 5| (Voltage-gated potassium channel subunit Kv1.5) (HK2) (HPCN1) Length = 613 Score = 31.6 bits (70), Expect = 1.8 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +1 Query: 4 SALRPPPQETEAGIRPRTPMDSKLQTPLLPPP 99 S +RP P + G+RP P+ +L P PPP Sbjct: 62 SGVRPLPPLPDPGVRPLPPLPEELPRPRRPPP 93
>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) Length = 476 Score = 30.0 bits (66), Expect = 5.3 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = +3 Query: 384 WHGECGGDSMRAGVRREQVRHA---GHLHATLHCPAHGH 491 WHG S G RE++ H GH H +LH HGH Sbjct: 79 WHGHA--HSHDHGHSREELHHGHSHGHSHDSLHHGGHGH 115
>NORM_SYNY3 (Q55364) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 461 Score = 29.6 bits (65), Expect = 6.9 Identities = 27/109 (24%), Positives = 49/109 (44%) Frame = +1 Query: 217 MRMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGS 396 ++ L+ + P + ++ Y + ++ F G LGT LAA + + + V + + L M Sbjct: 240 LQQLLWVGGPIGIAAVLEYGLYLTASFFMGALGTPILAAHQVVSQTVLVL-FMVPLAMSY 298 Query: 397 AVETLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPILIL 543 A GQ +G + + R L+ I LAVL+ + I +L Sbjct: 299 AATVRVGQWFGQQHWPQI-----RQAALV---SIGLAVLFMLTAGIALL 339
>MAO1_BACSU (P54572) Probable NAD-dependent malic enzyme 1 (EC 1.1.1.38)| (NAD-ME 1) Length = 439 Score = 29.6 bits (65), Expect = 6.9 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 17/120 (14%) Frame = +1 Query: 274 LMSMSTQIFAGHLGTLELAAASLGNTGI---------QVFAYGLMLGMG-----SAVETL 411 +++++ I A ++L A +G G+ AYG+ G SA+ L Sbjct: 241 VVTLAAAISACRSAGVDLKEAKVGQIGLGAAGVAICRMFMAYGVNAVYGTDKSESAMNRL 300 Query: 412 CGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRP---ILILLSESPEIARAAAI 582 + YG + M+ +++ TG+P + AF R IL L + PEI AA+ Sbjct: 301 --EQYGGQAVSSIEELMETCDIVIATTGVPGLIKPAFVRSGQVILALSNPKPEIEPEAAL 358
>NORM_HAEDU (Q7VMB5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 463 Score = 29.6 bits (65), Expect = 6.9 Identities = 24/104 (23%), Positives = 52/104 (50%) Frame = +1 Query: 226 LVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLGMGSAVE 405 L +L P + + M ++ + AG + +++A ++ N+ I + +LG+ +A+ Sbjct: 15 LFKLTVPIFISQLSASGMGLADIVMAGLVSDDDVSAIAVSNS-IYFPLFLFVLGVLNAIT 73 Query: 406 TLCGQAYGANKFDMLGIYMQRSTVLLMATGIPLAVLYAFSRPIL 537 GAN+ +++ +++ L+ A IPL V++ S IL Sbjct: 74 PTVSYLNGANQRNLIAHQIRQGFWLVWAFVIPLIVVFLNSHWIL 117
>PPOC_TOBAC (O24163) Protoporphyrinogen oxidase, chloroplast precursor (EC| 1.3.3.4) (PPO I) (Protoporphyrinogen IX oxidase isozyme I) (PPX I) Length = 548 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 220 RMLVRLAAPAVLVYMINYLMSMSTQIFAGHLGTLELAAASLGNTGIQVFAYGLMLG 387 +ML++ A LV + Q GHL TL A A++ + G++ GL LG Sbjct: 464 KMLIKPKAQDPLVVGVRVWPQAIPQFLVGHLDTLSTAKAAMNDNGLE----GLFLG 515 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,444,497 Number of Sequences: 219361 Number of extensions: 839441 Number of successful extensions: 3316 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 3132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3308 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
