ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23c04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ001341.1|HVACYLCOA Hordeum vulgare mRNA for putative acyl-... 1086 0.0
2emb|X84055.1|HVCDR29 H.vulgare cdr29 gene 468 e-128
3gb|BT009170.1| Triticum aestivum clone wl1n.pk0102.e8:fis, full ... 291 1e-75
4gb|AY104290.1| Zea mays PCO085555 mRNA sequence 278 2e-71
5gb|AY105897.1| Zea mays PCO085554 mRNA sequence 264 3e-67
6ref|XM_476282.1| Oryza sativa (japonica cultivar-group), predic... 252 1e-63
7dbj|AK100758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
8dbj|AK098983.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
9dbj|AK104349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
10dbj|AK059993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 246 7e-62
11dbj|AK060849.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 3e-61
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
13dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
14ref|NM_129124.3| Arabidopsis thaliana ACX5 (ACYL-COA OXIDASE 5);... 54 5e-04
15gb|AY096691.1| Arabidopsis thaliana putative acyl-CoA oxidase (A... 54 5e-04
16gb|AY074357.1| Arabidopsis thaliana putative acyl-CoA oxidase (A... 54 5e-04
17gb|AF404403.1|AF404403 Glycine max acyl-CoA oxidase (ACX1;1) mRN... 50 0.009
18ref|NM_117778.3| Arabidopsis thaliana ACX1 (ACYL-COA OXIDASE 1) ... 46 0.13
19gb|BT001067.1| Arabidopsis thaliana At4g16760/dl4405c mRNA, comp... 46 0.13
20emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA ... 46 0.13
21emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, ... 46 0.13
22gb|AY058849.1| Arabidopsis thaliana AT4g16760/dl4405c mRNA, comp... 46 0.13
23dbj|AK221943.1| Arabidopsis thaliana mRNA for hypothetical prote... 46 0.13
24gb|AF057044.1|AF057044 Arabidopsis thaliana acyl-CoA oxidase (AC... 46 0.13
25dbj|AK048137.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 44 0.52
26gb|AC152417.3| Mus musculus BAC clone RP23-56I21 from chromosome... 44 0.52
27emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f2... 44 0.52
28gb|AC132135.3| Mus musculus BAC clone RP23-268C21 from 10, compl... 44 0.52
29gb|AC159614.7| Mus musculus chromosome 1, clone RP24-305O23, com... 42 2.1
30gb|AC119408.23| Medicago truncatula clone mth2-5f18, complete se... 42 2.1
31gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete seq... 42 2.1
32emb|BX829266.1|CNS0A3HA Arabidopsis thaliana Full-length cDNA Co... 42 2.1
33gb|L43668.1|CHKMCW178 Gallus domesticus DNA microsatellite marke... 42 2.1
34gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, compl... 40 8.2
35gb|AY752879.1| Drosophila melanogaster TAF-like protein mRNA, co... 40 8.2
36gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete s... 40 8.2
37gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome... 40 8.2
38gb|AC126944.3| Mus musculus BAC clone RP23-19A4 from chromosome ... 40 8.2
39gb|AC144866.2| Xenopus tropicalis clone ISB-367O10, complete seq... 40 8.2
40gb|DQ453548.1| Ovis aries myogenin gene, exons 1 through 3 and p... 40 8.2
41gb|AC144820.2| Xenopus tropicalis clone ISB-286C6, complete sequ... 40 8.2
42emb|AL034549.19|HS1125A11 Human DNA sequence from clone RP5-1125... 40 8.2
43emb|AL021938.1|HS232K4 Human DNA sequence from clone RP1-232K4 o... 40 8.2
44gb|AF170880.3| Streptomyces spheroides novobiocin biosynthetic g... 40 8.2
45gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome... 40 8.2
46emb|AJ292466.1|HSA292466 Homo sapiens mRNA for WDR9 protein (WDR... 40 8.2
47emb|AJ292465.1|HSA292465 Homo sapiens mRNA for WDR9 protein (WDR... 40 8.2
48emb|AJ238214.2|HSA238214 Homo sapiens mRNA originating from the ... 40 8.2
49gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswe... 40 8.2
50emb|CR612626.1| full-length cDNA clone CS0DI018YG11 of Placenta ... 40 8.2
51ref|NM_141054.1| Drosophila melanogaster CG11308-RA (sa), mRNA 40 8.2
52gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park C... 40 8.2
53gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell... 40 8.2
54dbj|AB080587.1| Homo sapiens WDR9 mRNA for WD repeat protein, WD... 40 8.2
55dbj|AB080586.1| Homo sapiens WDR9 mRNA for WD repeat protein, WD... 40 8.2
56gb|BT023594.1| Drosophila melanogaster IP09318 full insert cDNA 40 8.2
57gb|BC064602.1| Homo sapiens bromodomain and WD repeat domain con... 40 8.2
58gb|AF263245.1|AF263245 Micromonospora megalomicea subsp. nigra m... 40 8.2
59ref|NM_001007246.1| Homo sapiens bromodomain and WD repeat domai... 40 8.2
60ref|NM_033656.2| Homo sapiens bromodomain and WD repeat domain c... 40 8.2
61ref|NM_018963.3| Homo sapiens bromodomain and WD repeat domain c... 40 8.2
62gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75... 40 8.2
63dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.2
64gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.2
65gb|AC132111.4| Mus musculus BAC clone RP24-200H19 from 14, compl... 40 8.2

>emb|AJ001341.1|HVACYLCOA Hordeum vulgare mRNA for putative acyl-CoA oxidase
          Length = 2273

 Score = 1086 bits (548), Expect = 0.0
 Identities = 590/600 (98%), Gaps = 3/600 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            |||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||
Sbjct: 1232 ctgaactgtttgcggtctatgttcctgcctgcacctatgaaggag-caatg-cgttttgc 1289

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 1349

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 ctgtcggcaccgtagctcacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 1409

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 taaatacagccgaagactgg-tcaatcctgctgccgtaaaggaggtgtttgaagctaggg 1468

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 1528

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1529 gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 1588

                                                                        
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctggccctggggtgaaggagc 422
            |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 1589 ttgtgaccaagtttatcgagaagatcgaggaggacatccctggccctggggtgaaggagc 1648

                                                                        
Query: 423  agcctcagaagctgtgcagcatctacgcgctccacctcctgcacaagcacctgggcgact 482
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1649 agcttcagaagctgtgcagcatctacgcgctccacctcctgcacaagcacctgggcgact 1708

                                                                        
Query: 483  tcctgtcgacggggtgcgtcacggccaggcagggcgcgctggccaatgagcagctcggca 542
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 ccctgtcgacggggtgcgtcacggccaggcagggcgcgctggccaatgagcagctcggca 1768

                                                                        
Query: 543  agctctacgcccaagtgcgtcctaacgcggtggcgctggtggacgcgtttgactacacgg 602
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1769 agctctacgcccaagtgcgtcctaacgcggtggcgctggtggacgcgtttgactacacgg 1828



to top

>emb|X84055.1|HVCDR29 H.vulgare cdr29 gene
          Length = 1180

 Score =  468 bits (236), Expect = e-128
 Identities = 283/300 (94%), Gaps = 9/300 (3%)
 Strand = Plus / Plus

                                                                       
Query: 3   ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
           |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| 
Sbjct: 142 ctgaactgtttgcggtctatgttcctgcctgcacctatgaaggagacaatgtcgttttga 201

                                                                       
Query: 63  tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
           ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 202 tgttgcatgttgcaaggtttttgatgaagaccgtctctcaggtggccactaggaaccaac 261

                                                                       
Query: 123 ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 262 ctgtcggcaccgtagcttacatgggcaacatacatcacttgatgcaatgcaaaagcgctg 321

                                                                       
Query: 183 taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 322 taaatacagccgaagactggctcaatcctgctaccgtaaagaaggtgtttgaagctaggg 381

                                                                       
Query: 243 ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
           |||||||||||||||||||||||||         ||||||||||||||||||||||||||
Sbjct: 382 ccctgaggatggccgtgaactgtgc---------cagcaaggcgccaagccaagaagaag 432



 Score =  270 bits (136), Expect = 5e-69
 Identities = 168/176 (95%), Gaps = 2/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 302 ggtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatc 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 491 ggtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtc-agctgatc 549

                                                                       
Query: 362 attgtgaccaagtttatcgagaagatgcaggaggacatccctggccctggggtgaaggag 421
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 attgtgaccaaattcatcgagaagatgcaggaggacatccctggccctggggtgaaggag 609

                                                                   
Query: 422 cagcctcagaagctgtgcagcatctacgcgctccacctcctgc-acaagcacctgg 476
           ||||  |||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 610 cagctccagaagctgtgcagcatctacgcgctccacctactcctacaagcacctgg 665



to top

>gb|BT009170.1| Triticum aestivum clone wl1n.pk0102.e8:fis, full insert mRNA sequence
          Length = 2379

 Score =  291 bits (147), Expect = 1e-75
 Identities = 474/583 (81%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| ||||||| |||||||||||||| |||||   ||||||||||||| | ||| |||
Sbjct: 1339 ctgaattgtttgctgtctatgttcctgcttgcacttatgaaggagacaatattgttctgc 1398

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            | ||||||||||||||| || | ||||||||||| |||||  || |  |||| || ||||
Sbjct: 1399 ttttgcaggttgcaaggattctaatgaagaccgtatctcaattgacatctggaaagcaac 1458

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            |||| || ||  | ||||||||||||||  ||||  |  |||||||||||||| | ||||
Sbjct: 1459 ctgttggtacaatggcttacatgggcaatgtacaatatctgatgcaatgcaaatgtgctg 1518

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            | || ||||||||||| ||||| || |||| |||| || | |||| |||||||||  |||
Sbjct: 1519 ttaacacagccgaagattggcttaaccctgttgccatacaagaggcgtttgaagcccggg 1578

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            | || |||||||| || |||||||||||||||||  || | ||  ||| |||||||||||
Sbjct: 1579 ctctcaggatggcagtaaactgtgcccagaacataggccaagcagcaaaccaagaagaag 1638

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            |||||| |||||  || ||||||||||| |||||||| || |||||| ||||| || |||
Sbjct: 1639 gtttctatgagcggtcccctgatttgctagaggctgcagtagctcacatccagttggtca 1698

                                                                        
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctggccctggggtgaaggagc 422
            |||| |||||||| || | |||| | ||| ||||||| ||||| ||||| |||||||| |
Sbjct: 1699 ttgtaaccaagttcattgcgaaggtacagcaggacattcctggacctggagtgaaggaac 1758

                                                                        
Query: 423  agcctcagaagctgtgcagcatctacgcgctccacctcctgcacaagcacctgggcgact 482
            |||  ||||| || ||||   |||| || ||| || | || |||||||||||||||||||
Sbjct: 1759 agctccagaacctttgcaatgtctatgccctctacattctccacaagcacctgggcgact 1818

                                                                        
Query: 483  tcctgtcgacggggtgcgtcacggccaggcagggcgcgctggccaatgagcagctcggca 542
            ||||| | || |||||| ||||  ||| |||||| |||||||| || |||||||| ||||
Sbjct: 1819 tcctggcaaccgggtgcatcacacccaagcagggagcgctggcaaacgagcagctgggca 1878

                                                       
Query: 543  agctctacgcccaagtgcgtcctaacgcggtggcgctggtgga 585
            |||| ||||| || |||||||| || || || |||||||||||
Sbjct: 1879 agctttacgcacaggtgcgtccaaatgctgttgcgctggtgga 1921



to top

>gb|AY104290.1| Zea mays PCO085555 mRNA sequence
          Length = 2558

 Score =  278 bits (140), Expect = 2e-71
 Identities = 470/580 (81%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| ||||||| |||||||||||||| |||||   ||||||||||||| | ||| |||
Sbjct: 1405 ctgaattgtttgctgtctatgttcctgcttgcacttatgaaggagacaatattgttctgc 1464

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            | ||||||||||||||| || | ||||||||| | |||||  || |  |||| || ||||
Sbjct: 1465 ttttgcaggttgcaaggattctaatgaagaccttatctcaattgacatctggaaaacaac 1524

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            |||| || ||  | ||||||||||||||  ||||  |  |||||||||||||| | ||||
Sbjct: 1525 ctgttggtacaatggcttacatgggcaatgtacaatatctgatgcaatgcaaatgtgctg 1584

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            | || ||||| ||||| ||||| || |||| |||| || | |||| ||||||||| ||||
Sbjct: 1585 ttaacacagctgaagattggcttaaccctgttgccatacaagaggcgtttgaagccaggg 1644

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            | || |||||||| || |||||||||||||||||  || | ||  ||| |||||||||||
Sbjct: 1645 ctctcaggatggcagtaaactgtgcccagaacataggccaagcagcaaaccaagaagaag 1704

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            |||||| |||||  || ||||||||||| |||||||| || |||||| ||||| || |||
Sbjct: 1705 gtttctatgagcggtcccctgatttgctagaggctgcagtagctcacatccagttggtca 1764

                                                                        
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctggccctggggtgaaggagc 422
            |||| |||||||| ||   |||| ||||| ||||||| ||||| ||||| |||||||| |
Sbjct: 1765 ttgtaaccaagttcatttcgaaggtgcagcaggacattcctggacctggagtgaaggaac 1824

                                                                        
Query: 423  agcctcagaagctgtgcagcatctacgcgctccacctcctgcacaagcacctgggcgact 482
            |||  ||||| || ||||   |||| || ||| || | || |||||||||||||||||||
Sbjct: 1825 agctccagaacctttgcaatgtctatgccctctacattctccacaagcacctgggcgact 1884

                                                                        
Query: 483  tcctgtcgacggggtgcgtcacggccaggcagggcgcgctggccaatgagcagctcggca 542
            ||||| | || |||||| ||||  ||| |||||| |||||||| || |||||||| ||||
Sbjct: 1885 tcctggcaaccgggtgcatcacacccaagcagggagcgctggcaaacgagcagctgggca 1944

                                                    
Query: 543  agctctacgcccaagtgcgtcctaacgcggtggcgctggt 582
            |||| ||||| || |||||||| || || || ||||||||
Sbjct: 1945 agctttacgcacaggtgcgtccaaatgctgttgcgctggt 1984



to top

>gb|AY105897.1| Zea mays PCO085554 mRNA sequence
          Length = 2366

 Score =  264 bits (133), Expect = 3e-67
 Identities = 483/600 (80%), Gaps = 6/600 (1%)
 Strand = Plus / Plus

                                                                        
Query: 9    tgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgctgttgc 68
            ||||||||||||||||||| || |||||    ||||||||||| ||||||||||| ||||
Sbjct: 1343 tgtttgcggtctatgttcccgcttgcacttacgaaggagacaacgtcgttttgcttttgc 1402

                                                                        
Query: 69   aggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaacctgtcg 128
            ||||||||||| || | ||||| ||||| |||||| ||||  | ||||| || ||||| |
Sbjct: 1403 aggttgcaaggattctaatgaaaaccgtttctcagttggcatccgggaaacagcctgttg 1462

                                                                        
Query: 129  gcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctgtaaata 188
            ||||  | || |||||||||||  | ||| | |||||||||||||||   ||||| | | 
Sbjct: 1463 gcacaatggcctacatgggcaaagtgcagtatttgatgcaatgcaaatctgctgtcagtt 1522

                                                                        
Query: 189  cagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctagggccctga 248
            |||| ||||| ||||| || |||| |||| || | ||||  |||||||| || || || |
Sbjct: 1523 cagctgaagattggcttaaccctgatgccatacaagaggcatttgaagcaagagcgctca 1582

                                                                        
Query: 249  ggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag------ 302
            | ||||| || ||||||||||||||||| ||| | ||  |||||||||| ||||      
Sbjct: 1583 gaatggcggtaaactgtgcccagaacataagccaagctgcaagccaagaggaagctgcag 1642

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            |||||| |||||  || || |||||||| |||||||| || |||||| |||||||||| |
Sbjct: 1643 gtttctatgagcggtccccagatttgcttgaggctgcggtagctcacatccagctgatta 1702

                                                                        
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctggccctggggtgaaggagc 422
            | ||||||||||| || |||||| ||||  |||| || ||||| |  || |||||||| |
Sbjct: 1703 tcgtgaccaagttcattgagaaggtgcatcaggagattcctggacacggagtgaaggaac 1762

                                                                        
Query: 423  agcctcagaagctgtgcagcatctacgcgctccacctcctgcacaagcacctgggcgact 482
            |||  |||   || |||| | | ||||||||  || |||| |||||||||||||||||||
Sbjct: 1763 agctccaggccctctgcaacgtgtacgcgctgtacatcctccacaagcacctgggcgact 1822

                                                                        
Query: 483  tcctgtcgacggggtgcgtcacggccaggcagggcgcgctggccaatgagcagctcggca 542
            || || |||| |||||| ||||| |||||||||| |||||||| || |||||||| ||||
Sbjct: 1823 tcttggcgactgggtgcatcacgcccaggcagggagcgctggcaaacgagcagctgggca 1882

                                                                        
Query: 543  agctctacgcccaagtgcgtcctaacgcggtggcgctggtggacgcgtttgactacacgg 602
            |||| ||||| || |||||||| ||||| |||||||||||||| |||||  |||||||||
Sbjct: 1883 agctgtacgcgcaggtgcgtccgaacgctgtggcgctggtggatgcgttcaactacacgg 1942



to top

>ref|XM_476282.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2010

 Score =  252 bits (127), Expect = 1e-63
 Identities = 334/403 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| |||||||  ||||||||||||| |||||   ||||||||||||||| |||||||
Sbjct: 1247 ctgaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgc 1306

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            | |||||||||||||||||| | |||||||| || || ||| | ||  |||| || || |
Sbjct: 1307 tattgcaggttgcaaggtttctaatgaagactgtatcccagttagcttctggaaaacagc 1366

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            |||| || ||    ||||||||||||||||||||| ||||||||||||||||| | | ||
Sbjct: 1367 ctgttggtacaacggcttacatgggcaacatacagtacttgatgcaatgcaaatgtggtg 1426

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            |||||||||| ||||| ||||| |||||||||||| ||   ||||| ||||||||| |||
Sbjct: 1427 taaatacagctgaagattggctaaatcctgctgccatacgagaggtatttgaagctcggg 1486

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            | || |||||||| ||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct: 1487 ctctcaggatggcggtgaattgtgcccagaacataaacaaggcgccaagccaagaagaag 1546

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            | || | |||||| || |||||| |||| ||||  || ||||| ||  ||||| |||| |
Sbjct: 1547 ggttttatgagctatcccctgatctgcttgaggtggcggtggcccatatccagttgataa 1606

                                                       
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctgg 405
            |||| |||||||| || |||||  |  || |||||||||||||
Sbjct: 1607 ttgtaaccaagttcatagagaaattagagcaggacatccctgg 1649



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                        
Query: 464  cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
            |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 1708 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 1767

                                                                        
Query: 524  gccaatgagcagctcggcaagctctacgcccaagtgcgtcctaacgcggtggcgctggtg 583
            || || |||||||| || ||||| || || || ||||| || ||||||||||||||||||
Sbjct: 1768 gcaaacgagcagctgggaaagctgtatgcgcaggtgcggccgaacgcggtggcgctggtg 1827

                             
Query: 584  gacgcgtttgactacac 600
            ||||||||  |||||||
Sbjct: 1828 gacgcgttcaactacac 1844



to top

>dbj|AK100758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119B01, full
            insert sequence
          Length = 2636

 Score =  252 bits (127), Expect = 1e-63
 Identities = 334/403 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| |||||||  ||||||||||||| |||||   ||||||||||||||| |||||||
Sbjct: 1411 ctgaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgc 1470

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            | |||||||||||||||||| | |||||||| || || ||| | ||  |||| || || |
Sbjct: 1471 tattgcaggttgcaaggtttctaatgaagactgtatcccagttagcttctggaaaacagc 1530

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            |||| || ||    ||||||||||||||||||||| ||||||||||||||||| | | ||
Sbjct: 1531 ctgttggtacaacggcttacatgggcaacatacagtacttgatgcaatgcaaatgtggtg 1590

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            |||||||||| ||||| ||||| |||||||||||| ||   ||||| ||||||||| |||
Sbjct: 1591 taaatacagctgaagattggctaaatcctgctgccatacgagaggtatttgaagctcggg 1650

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            | || |||||||| ||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct: 1651 ctctcaggatggcggtgaattgtgcccagaacataaacaaggcgccaagccaagaagaag 1710

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            | || | |||||| || |||||| |||| ||||  || ||||| ||  ||||| |||| |
Sbjct: 1711 ggttttatgagctatcccctgatctgcttgaggtggcggtggcccatatccagttgataa 1770

                                                       
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctgg 405
            |||| |||||||| || |||||  |  || |||||||||||||
Sbjct: 1771 ttgtaaccaagttcatagagaaattagagcaggacatccctgg 1813



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                        
Query: 464  cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
            |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 1872 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 1931

                                                                        
Query: 524  gccaatgagcagctcggcaagctctacgcccaagtgcgtcctaacgcggtggcgctggtg 583
            || || |||||||| || ||||| || || || ||||| || ||||||||||||||||||
Sbjct: 1932 gcaaacgagcagctgggaaagctgtatgcgcaggtgcggccgaacgcggtggcgctggtg 1991

                             
Query: 584  gacgcgtttgactacac 600
            ||||||||  |||||||
Sbjct: 1992 gacgcgttcaactacac 2008



to top

>dbj|AK098983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M04, full
            insert sequence
          Length = 2385

 Score =  252 bits (127), Expect = 1e-63
 Identities = 334/403 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| |||||||  ||||||||||||| |||||   ||||||||||||||| |||||||
Sbjct: 1354 ctgaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgc 1413

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            | |||||||||||||||||| | |||||||| || || ||| | ||  |||| || || |
Sbjct: 1414 tattgcaggttgcaaggtttctaatgaagactgtatcccagttagcttctggaaaacagc 1473

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            |||| || ||    ||||||||||||||||||||| ||||||||||||||||| | | ||
Sbjct: 1474 ctgttggtacaacggcttacatgggcaacatacagtacttgatgcaatgcaaatgtggtg 1533

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            |||||||||| ||||| ||||| |||||||||||| ||   ||||| ||||||||| |||
Sbjct: 1534 taaatacagctgaagattggctaaatcctgctgccatacgagaggtatttgaagctcggg 1593

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            | || |||||||| ||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct: 1594 ctctcaggatggcggtgaattgtgcccagaacataaacaaggcgccaagccaagaagaag 1653

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            | || | |||||| || |||||| |||| ||||  || ||||| ||  ||||| |||| |
Sbjct: 1654 ggttttatgagctatcccctgatctgcttgaggtggcggtggcccatatccagttgataa 1713

                                                       
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctgg 405
            |||| |||||||| || |||||  |  || |||||||||||||
Sbjct: 1714 ttgtaaccaagttcatagagaaattagagcaggacatccctgg 1756



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                        
Query: 464  cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
            |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 1815 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 1874

                                                                        
Query: 524  gccaatgagcagctcggcaagctctacgcccaagtgcgtcctaacgcggtggcgctggtg 583
            || || |||||||| || ||||| || || || ||||| || ||||||||||||||||||
Sbjct: 1875 gcaaacgagcagctgggaaagctgtatgcgcaggtgcggccgaacgcggtggcgctggtg 1934

                             
Query: 584  gacgcgtttgactacac 600
            ||||||||  |||||||
Sbjct: 1935 gacgcgttcaactacac 1951



to top

>dbj|AK104349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F12, full
           insert sequence
          Length = 1045

 Score =  246 bits (124), Expect = 7e-62
 Identities = 322/388 (82%)
 Strand = Plus / Plus

                                                                       
Query: 18  tctatgttcctgcctgcaccactgaaggagacaatgtcgttttgctgttgcaggttgcaa 77
           ||||||||||||| |||||   ||||||||||||||| |||||||| |||||||||||||
Sbjct: 6   tctatgttcctgcttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaa 65

                                                                       
Query: 78  ggtttttgatgaagaccgtctctcaggtggccactgggaaccaacctgtcggcaccgtag 137
           ||||| | |||||||| || || ||| | ||  |||| || || ||||| || ||    |
Sbjct: 66  ggtttctaatgaagactgtatcccagttagcttctggaaaacagcctgttggtacaacgg 125

                                                                       
Query: 138 cttacatgggcaacatacagcacttgatgcaatgcaaaagcgctgtaaatacagccgaag 197
           |||||||||||||||||||| ||||||||||||||||| | | |||||||||||| ||||
Sbjct: 126 cttacatgggcaacatacagtacttgatgcaatgcaaatgtggtgtaaatacagctgaag 185

                                                                       
Query: 198 actggctcaatcctgctgccgtaaaggaggtgtttgaagctagggccctgaggatggccg 257
           | ||||| |||||||||||| ||   ||||| ||||||||| |||| || |||||||| |
Sbjct: 186 attggctaaatcctgctgccatacgagaggtatttgaagctcgggctctcaggatggcgg 245

                                                                       
Query: 258 tgaactgtgcccagaacatcagcaaggcgccaagccaagaagaaggtttctctgagctct 317
           |||| |||||||||||||| | |||||||||||||||||||||||| || | |||||| |
Sbjct: 246 tgaattgtgcccagaacataaacaaggcgccaagccaagaagaagggttttatgagctat 305

                                                                       
Query: 318 cacctgatttgctcgaggctgccgtggctcacgtccagctgatcattgtgaccaagttta 377
           | |||||| |||| ||||  || ||||| ||  ||||| |||| ||||| |||||||| |
Sbjct: 306 cccctgatctgcttgaggtggcggtggcccatatccagttgataattgtaaccaagttca 365

                                       
Query: 378 tcgagaagatgcaggaggacatccctgg 405
           | |||||  |  || |||||||||||||
Sbjct: 366 tagagaaattagagcaggacatccctgg 393



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 464 cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
           |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 452 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 511

                                                                       
Query: 524 gccaatgagcagctcggcaagctctacgcccaagtgcgtcctaacgcggtggcgctggtg 583
           || || |||||||| || ||||| || || || ||||| || ||||||||||||||||||
Sbjct: 512 gcaaacgagcagctgggaaagctgtatgcgcaggtgcggccgaacgcggtggcgctggtg 571

                            
Query: 584 gacgcgtttgactacac 600
           ||||||||  |||||||
Sbjct: 572 gacgcgttcaactacac 588



to top

>dbj|AK059993.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D08, full
           insert sequence
          Length = 1045

 Score =  246 bits (124), Expect = 7e-62
 Identities = 322/388 (82%)
 Strand = Plus / Plus

                                                                       
Query: 18  tctatgttcctgcctgcaccactgaaggagacaatgtcgttttgctgttgcaggttgcaa 77
           ||||||||||||| |||||   ||||||||||||||| |||||||| |||||||||||||
Sbjct: 6   tctatgttcctgcttgcacttatgaaggagacaatgttgttttgctattgcaggttgcaa 65

                                                                       
Query: 78  ggtttttgatgaagaccgtctctcaggtggccactgggaaccaacctgtcggcaccgtag 137
           ||||| | |||||||| || || ||| | ||  |||| || || ||||| || ||    |
Sbjct: 66  ggtttctaatgaagactgtatcccagttagcttctggaaaacagcctgttggtacaacgg 125

                                                                       
Query: 138 cttacatgggcaacatacagcacttgatgcaatgcaaaagcgctgtaaatacagccgaag 197
           |||||||||||||||||||| ||||||||||||||||| | | |||||||||||| ||||
Sbjct: 126 cttacatgggcaacatacagtacttgatgcaatgcaaatgtggtgtaaatacagctgaag 185

                                                                       
Query: 198 actggctcaatcctgctgccgtaaaggaggtgtttgaagctagggccctgaggatggccg 257
           | ||||| |||||||||||| ||   ||||| ||||||||| |||| || |||||||| |
Sbjct: 186 attggctaaatcctgctgccatacgagaggtatttgaagctcgggctctcaggatggcgg 245

                                                                       
Query: 258 tgaactgtgcccagaacatcagcaaggcgccaagccaagaagaaggtttctctgagctct 317
           |||| |||||||||||||| | |||||||||||||||||||||||| || | |||||| |
Sbjct: 246 tgaattgtgcccagaacataaacaaggcgccaagccaagaagaagggttttatgagctat 305

                                                                       
Query: 318 cacctgatttgctcgaggctgccgtggctcacgtccagctgatcattgtgaccaagttta 377
           | |||||| |||| ||||  || ||||| ||  ||||| |||| ||||| |||||||| |
Sbjct: 306 cccctgatctgcttgaggtggcggtggcccatatccagttgataattgtaaccaagttca 365

                                       
Query: 378 tcgagaagatgcaggaggacatccctgg 405
           | |||||  |  || |||||||||||||
Sbjct: 366 tagagaaattagagcaggacatccctgg 393



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                       
Query: 464 cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
           |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 452 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 511

                                                                       
Query: 524 gccaatgagcagctcggcaagctctacgcccaagtgcgtcctaacgcggtggcgctggtg 583
           || || |||||||| || ||||| || || || ||||| || ||||||||||||||||||
Sbjct: 512 gcaaacgagcagctgggaaagctgtatgcgcaggtgcggccgaacgcggtggcgctggtg 571

                            
Query: 584 gacgcgtttgactacac 600
           ||||||||  |||||||
Sbjct: 572 gacgcgttcaactacac 588



to top

>dbj|AK060849.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E06, full
            insert sequence
          Length = 2445

 Score =  244 bits (123), Expect = 3e-61
 Identities = 333/403 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| |||||||  ||||||||||||| |||||   ||||||||||||||| ||||| |
Sbjct: 1414 ctgaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttac 1473

                                                                        
Query: 63   tgttgcaggttgcaaggtttttgatgaagaccgtctctcaggtggccactgggaaccaac 122
            | |||||||||||||||||| | |||||||| || || ||| | ||  |||| || || |
Sbjct: 1474 tattgcaggttgcaaggtttctaatgaagactgtatcccagttagcttctggaaaacagc 1533

                                                                        
Query: 123  ctgtcggcaccgtagcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctg 182
            |||| || ||    ||||||||||||||||||||| ||||||||||||||||| | | ||
Sbjct: 1534 ctgttggtacaacggcttacatgggcaacatacagtacttgatgcaatgcaaatgtggtg 1593

                                                                        
Query: 183  taaatacagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctaggg 242
            |||||||||| ||||| ||||| |||||||||||| ||   ||||| ||||||||| |||
Sbjct: 1594 taaatacagctgaagattggctaaatcctgctgccatacgagaggtatttgaagctcggg 1653

                                                                        
Query: 243  ccctgaggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaag 302
            | || |||||||| ||||| |||||||||||||| | |||||||||||||||||||||||
Sbjct: 1654 ctctcaggatggcggtgaattgtgcccagaacataaacaaggcgccaagccaagaagaag 1713

                                                                        
Query: 303  gtttctctgagctctcacctgatttgctcgaggctgccgtggctcacgtccagctgatca 362
            | || | |||||| || |||||| |||| ||||  || ||||| ||  ||||| |||| |
Sbjct: 1714 ggttttatgagctatcccctgatctgcttgaggtggcggtggcccatatccagttgataa 1773

                                                       
Query: 363  ttgtgaccaagtttatcgagaagatgcaggaggacatccctgg 405
            |||| |||||||| || |||||  |  || |||||||||||||
Sbjct: 1774 ttgtaaccaagttcatagagaaattagagcaggacatccctgg 1816



 Score =  121 bits (61), Expect = 3e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                        
Query: 464  cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
            |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 1875 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 1934

                                                                        
Query: 524  gccaatgagcagctcggcaagctctacgcccaagtgcgtcctaacgcggtggcgctggtg 583
            || || |||||||| || ||||| || || || ||||| || ||||||||||||||||||
Sbjct: 1935 gcaaacgagcagctgggaaagctgtatgcgcaggtgcggccgaacgcggtggcgctggtg 1994

                             
Query: 584  gacgcgtttgactacac 600
            ||||||||  |||||||
Sbjct: 1995 gacgcgttcaactacac 2011



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  115 bits (58), Expect = 2e-22
 Identities = 103/118 (87%)
 Strand = Plus / Plus

                                                                          
Query: 188    acagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctagggccctg 247
              ||||| ||||| ||||| |||||||||||| ||   ||||| ||||||||| |||| || 
Sbjct: 230449 acagctgaagattggctaaatcctgctgccatacgagaggtatttgaagctcgggctctc 230508

                                                                        
Query: 248    aggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaaggtt 305
              |||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 230509 aggatggcggtgaattgtgcccagaacataaacaaggcgccaagccaagaagaaggtt 230566



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                          
Query: 464    cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
              |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 230971 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 231030

                                     
Query: 524    gccaatgagcagctcggcaagct 546
              || || |||||||| || |||||
Sbjct: 231031 gcaaacgagcagctgggaaagct 231053



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                     
Query: 137    gcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctgtaaatacag 191
              ||||||||||||||||||||| ||||||||||||||||| | | |||||||||||
Sbjct: 230248 gcttacatgggcaacatacagtacttgatgcaatgcaaatgtggtgtaaatacag 230302



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                          
Query: 3      ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
              ||||| |||||||  ||||||||||||| |||||   ||||||||||||||| |||||||
Sbjct: 229951 ctgaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgc 230010

                         
Query: 63     tgttgcaggtt 73
              | |||||||||
Sbjct: 230011 tattgcaggtt 230021



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                          
Query: 557    gtgcgtcctaacgcggtggcgctggtggacgcgtttgactacac 600
              ||||| || ||||||||||||||||||||||||||  |||||||
Sbjct: 231137 gtgcggccgaacgcggtggcgctggtggacgcgttcaactacac 231180



to top

>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0075G19
          Length = 163558

 Score =  115 bits (58), Expect = 2e-22
 Identities = 103/118 (87%)
 Strand = Plus / Plus

                                                                         
Query: 188   acagccgaagactggctcaatcctgctgccgtaaaggaggtgtttgaagctagggccctg 247
             ||||| ||||| ||||| |||||||||||| ||   ||||| ||||||||| |||| || 
Sbjct: 95345 acagctgaagattggctaaatcctgctgccatacgagaggtatttgaagctcgggctctc 95404

                                                                       
Query: 248   aggatggccgtgaactgtgcccagaacatcagcaaggcgccaagccaagaagaaggtt 305
             |||||||| ||||| |||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 95405 aggatggcggtgaattgtgcccagaacataaacaaggcgccaagccaagaagaaggtt 95462



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 72/83 (86%)
 Strand = Plus / Plus

                                                                         
Query: 464   cacaagcacctgggcgacttcctgtcgacggggtgcgtcacggccaggcagggcgcgctg 523
             |||||||| ||||| |||||||||||||||||| || |||| || |||||||| ||||||
Sbjct: 95867 cacaagcatctgggtgacttcctgtcgacggggagcatcacagcaaggcagggagcgctg 95926

                                    
Query: 524   gccaatgagcagctcggcaagct 546
             || || |||||||| || |||||
Sbjct: 95927 gcaaacgagcagctgggaaagct 95949



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/55 (92%)
 Strand = Plus / Plus

                                                                    
Query: 137   gcttacatgggcaacatacagcacttgatgcaatgcaaaagcgctgtaaatacag 191
             ||||||||||||||||||||| ||||||||||||||||| | | |||||||||||
Sbjct: 95144 gcttacatgggcaacatacagtacttgatgcaatgcaaatgtggtgtaaatacag 95198



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                         
Query: 3     ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
             ||||| |||||||  ||||||||||||| |||||   ||||||||||||||| |||||||
Sbjct: 94847 ctgaattgtttgctatctatgttcctgcttgcacttatgaaggagacaatgttgttttgc 94906

                        
Query: 63    tgttgcaggtt 73
             | |||||||||
Sbjct: 94907 tattgcaggtt 94917



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 557   gtgcgtcctaacgcggtggcgctggtggacgcgtttgactacac 600
             ||||| || ||||||||||||||||||||||||||  |||||||
Sbjct: 96033 gtgcggccgaacgcggtggcgctggtggacgcgttcaactacac 96076



to top

>ref|NM_129124.3| Arabidopsis thaliana ACX5 (ACYL-COA OXIDASE 5); acyl-CoA oxidase/
            oxidoreductase AT2G35690 (ACX5) mRNA, complete cds
          Length = 2377

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| ||||||| || ||||||||||| |||||    || ||||||||||| || ||||
Sbjct: 1440 ctgaattgtttgctgtatatgttcctgcttgcacatacgagggagacaatgttgtgttgc 1499

                                           
Query: 63   tgttgcaggttgcaaggtttttgatgaagac 93
             ||| |||||||| || ||| ||||||||||
Sbjct: 1500 agttacaggttgctagatttctgatgaagac 1530



to top

>gb|AY096691.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA,
            complete cds
          Length = 2026

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| ||||||| || ||||||||||| |||||    || ||||||||||| || ||||
Sbjct: 1232 ctgaattgtttgctgtatatgttcctgcttgcacatacgagggagacaatgttgtgttgc 1291

                                           
Query: 63   tgttgcaggttgcaaggtttttgatgaagac 93
             ||| |||||||| || ||| ||||||||||
Sbjct: 1292 agttacaggttgctagatttctgatgaagac 1322



to top

>gb|AY074357.1| Arabidopsis thaliana putative acyl-CoA oxidase (At2g35690) mRNA,
            complete cds
          Length = 2393

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                        
Query: 3    ctgaactgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgc 62
            ||||| ||||||| || ||||||||||| |||||    || ||||||||||| || ||||
Sbjct: 1440 ctgaattgtttgctgtatatgttcctgcttgcacatacgagggagacaatgttgtgttgc 1499

                                           
Query: 63   tgttgcaggttgcaaggtttttgatgaagac 93
             ||| |||||||| || ||| ||||||||||
Sbjct: 1500 agttacaggttgctagatttctgatgaagac 1530



to top

>gb|AF404403.1|AF404403 Glycine max acyl-CoA oxidase (ACX1;1) mRNA, complete cds
          Length = 2263

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 58/69 (84%)
 Strand = Plus / Plus

                                                                        
Query: 11   tttgcggtctatgttcctgcctgcaccactgaaggagacaatgtcgttttgctgttgcag 70
            ||||| || |||||||||||||||||   ||||||||||||||| ||  | ||||| |||
Sbjct: 1379 tttgctgtttatgttcctgcctgcacgtatgaaggagacaatgttgtgcttctgttacag 1438

                     
Query: 71   gttgcaagg 79
            || ||||||
Sbjct: 1439 gtggcaagg 1447



to top

>ref|NM_117778.3| Arabidopsis thaliana ACX1 (ACYL-COA OXIDASE 1) AT4G16760 (ACX1) mRNA,
            complete cds
          Length = 2456

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 8    ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
            |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 1402 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 1448



to top

>gb|BT001067.1| Arabidopsis thaliana At4g16760/dl4405c mRNA, complete cds
          Length = 1995

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 8    ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
            |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 1237 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 1283



to top

>emb|Z97341.2|ATFCA6 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 6
          Length = 213788

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 8      ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
              |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 190922 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 190876



to top

>emb|AL161544.2|ATCHRIV44 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 44
          Length = 198735

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 8      ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
              |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 168850 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 168804



to top

>gb|AY058849.1| Arabidopsis thaliana AT4g16760/dl4405c mRNA, complete cds
          Length = 2341

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 8    ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
            |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 1370 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 1416



to top

>dbj|AK221943.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-46-G04
          Length = 1482

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 8   ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
           |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 504 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 550



to top

>gb|AF057044.1|AF057044 Arabidopsis thaliana acyl-CoA oxidase (ACX1) mRNA, complete cds
          Length = 2300

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 8    ctgtttgcggtctatgttcctgcctgcaccactgaaggagacaatgt 54
            |||||||| || |||||||||||||||||    ||||||||||||||
Sbjct: 1313 ctgtttgctgtatatgttcctgcctgcacatacgaaggagacaatgt 1359



to top

>dbj|AK048137.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130036O09 product:unclassifiable, full
            insert sequence
          Length = 2993

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 191  gccgaagactggctcaatcctg 212
            ||||||||||||||||||||||
Sbjct: 2823 gccgaagactggctcaatcctg 2802



to top

>gb|AC152417.3| Mus musculus BAC clone RP23-56I21 from chromosome 10, complete sequence
          Length = 233783

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 191    gccgaagactggctcaatcctg 212
              ||||||||||||||||||||||
Sbjct: 108307 gccgaagactggctcaatcctg 108328



to top

>emb|CT573502.2| Medicago truncatula chromosome 5 clone mte1-69f21, COMPLETE SEQUENCE
          Length = 89977

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 11    tttgcggtctatgttcctgcctgcaccactgaaggagacaat 52
             ||||| || |||||||||||||||||   |||||||||||||
Sbjct: 15675 tttgcagtttatgttcctgcctgcacatatgaaggagacaat 15716



to top

>gb|AC132135.3| Mus musculus BAC clone RP23-268C21 from 10, complete sequence
          Length = 168874

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 191   gccgaagactggctcaatcctg 212
             ||||||||||||||||||||||
Sbjct: 86641 gccgaagactggctcaatcctg 86662



to top

>gb|AC159614.7| Mus musculus chromosome 1, clone RP24-305O23, complete sequence
          Length = 156924

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 407    cctggggtgaaggagcagcct 427
              |||||||||||||||||||||
Sbjct: 107561 cctggggtgaaggagcagcct 107541



to top

>gb|AC119408.23| Medicago truncatula clone mth2-5f18, complete sequence
          Length = 120127

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 11   tttgcggtctatgttcctgcctgcaccactgaaggagacaa 51
            ||||| |||||||||||| |||||||   ||||||||||||
Sbjct: 6788 tttgcagtctatgttcctacctgcacatatgaaggagacaa 6828



to top

>gb|AC149079.7| Medicago truncatula clone mth2-75i8, complete sequence
          Length = 121295

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 11    tttgcggtctatgttcctgcctgcaccactgaaggagacaa 51
             ||||| |||||||||||| |||||||   ||||||||||||
Sbjct: 93623 tttgcagtctatgttcctacctgcacatatgaaggagacaa 93663



to top

>emb|BX829266.1|CNS0A3HA Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTSIL85ZH08 of Silique of strain col-0 of
          Arabidopsis thaliana (thale cress)
          Length = 965

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                       
Query: 8  ctgtttgcggtctatgttcctgcctgcac 36
          |||||||| || |||||||||||||||||
Sbjct: 62 ctgtttgctgtatatgttcctgcctgcac 90



to top

>gb|L43668.1|CHKMCW178 Gallus domesticus DNA microsatellite marker MCW178
          Length = 496

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 219 taaaggaggtgtttgaagcta 239
           |||||||||||||||||||||
Sbjct: 439 taaaggaggtgtttgaagcta 419



to top

>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    gggtgaaggagcagcctcag 430
              ||||||||||||||||||||
Sbjct: 156166 gggtgaaggagcagcctcag 156147



to top

>gb|AY752879.1| Drosophila melanogaster TAF-like protein mRNA, complete cds
          Length = 907

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 244 cctgaggatggccgtgaactgtgc 267
           ||||||||||| ||||||||||||
Sbjct: 831 cctgaggatgggcgtgaactgtgc 808



to top

>gb|AC146867.3| Xenopus tropicalis clone CH216-119B15, complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 268  ccagaacatcagcaaggcgc 287
            ||||||||||||||||||||
Sbjct: 2571 ccagaacatcagcaaggcgc 2552



to top

>gb|AC132140.3| Mus musculus BAC clone RP23-82C19 from chromosome 19, complete sequence
          Length = 278583

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 401    cctggccctggggtgaagga 420
              ||||||||||||||||||||
Sbjct: 227961 cctggccctggggtgaagga 227980



to top

>gb|AC126944.3| Mus musculus BAC clone RP23-19A4 from chromosome 19, complete sequence
          Length = 184164

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 401   cctggccctggggtgaagga 420
             ||||||||||||||||||||
Sbjct: 14588 cctggccctggggtgaagga 14607



to top

>gb|AC144866.2| Xenopus tropicalis clone ISB-367O10, complete sequence
          Length = 57987

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   ccagaacatcagcaaggcgc 287
             ||||||||||||||||||||
Sbjct: 33030 ccagaacatcagcaaggcgc 33011



to top

>gb|DQ453548.1| Ovis aries myogenin gene, exons 1 through 3 and partial cds
          Length = 1884

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 222  aggaggtgtttgaagctagggccc 245
            |||||||||||||| |||||||||
Sbjct: 1372 aggaggtgtttgaaactagggccc 1395



to top

>gb|AC144820.2| Xenopus tropicalis clone ISB-286C6, complete sequence
          Length = 103933

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   ccagaacatcagcaaggcgc 287
             ||||||||||||||||||||
Sbjct: 34019 ccagaacatcagcaaggcgc 34000



to top

>emb|AL034549.19|HS1125A11 Human DNA sequence from clone RP5-1125A11 on chromosome 20q11.1-11.23
             Contains the TPM5P gene for tropomyosin 5 pseudogene, a
             novel gene, the 3' end of a novel gene, the 5' end of the
             RALY gene for RNA binding protein (autoantigenic,
             hnRNP-associated with lethal yellow), a Down syndrome
             critical region gene 5 (DSCR5) pseudogene and two CpG
             islands, complete sequence
          Length = 155567

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 422   cagcctcagaagctgtgcag 441
             ||||||||||||||||||||
Sbjct: 32781 cagcctcagaagctgtgcag 32762



to top

>emb|AL021938.1|HS232K4 Human DNA sequence from clone RP1-232K4 on chromosome 6p22.3 Contains the
              3'end of the JMJ gene for jumonji protein and 2 CpG
              islands, complete sequence
          Length = 198161

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ttgctgttgcaggttgcaag 78
              ||||||||||||||||||||
Sbjct: 194125 ttgctgttgcaggttgcaag 194106



to top

>gb|AF170880.3| Streptomyces spheroides novobiocin biosynthetic gene cluster,
            complete sequence
          Length = 25617

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 568  cgcggtggcgctggtggacg 587
            ||||||||||||||||||||
Sbjct: 3450 cgcggtggcgctggtggacg 3431



to top

>gb|AC165259.2| Mus musculus BAC clone RP23-146P7 from chromosome 17, complete sequence
          Length = 252045

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    ggggtgaaggagcagcctca 429
              ||||||||||||||||||||
Sbjct: 104265 ggggtgaaggagcagcctca 104284



to top

>emb|AJ292466.1|HSA292466 Homo sapiens mRNA for WDR9 protein (WDR9 gene), form B
          Length = 7939

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 209 gctccagctcctgcaccagcacctgggc 182



to top

>emb|AJ292465.1|HSA292465 Homo sapiens mRNA for WDR9 protein (WDR9 gene), form A
          Length = 7925

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 209 gctccagctcctgcaccagcacctgggc 182



to top

>emb|AJ238214.2|HSA238214 Homo sapiens mRNA originating from the Down syndrome chromosomal
           region-2 (21q22.3) encoding hypothetical protein
          Length = 12935

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 229 gctccagctcctgcaccagcacctgggc 202



to top

>gb|AC010049.7| Drosophila melanogaster 3L BAC RPCI98-3O18 (Roswell Park Cancer
             Institute Drosophila BAC library) complete sequence
          Length = 168058

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   cctgaggatggccgtgaactgtgc 267
             ||||||||||| ||||||||||||
Sbjct: 43338 cctgaggatgggcgtgaactgtgc 43361



to top

>emb|CR612626.1| full-length cDNA clone CS0DI018YG11 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1176

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 615 gctccagctcctgcaccagcacctgggc 588



to top

>ref|NM_141054.1| Drosophila melanogaster CG11308-RA (sa), mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 244 cctgaggatggccgtgaactgtgc 267
           ||||||||||| ||||||||||||
Sbjct: 752 cctgaggatgggcgtgaactgtgc 729



to top

>gb|AC084200.22| Homo sapiens 12q BAC RP11-654D12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 191886

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 451   gctccacctcctgcacaagcacctgggc 478
             |||||| ||||||||| |||||||||||
Sbjct: 91893 gctccagctcctgcaccagcacctgggc 91866



to top

>gb|AC099553.1| Drosophila melanogaster 3L BAC RP98-25G5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 177608

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    cctgaggatggccgtgaactgtgc 267
              ||||||||||| ||||||||||||
Sbjct: 112244 cctgaggatgggcgtgaactgtgc 112267



to top

>dbj|AB080587.1| Homo sapiens WDR9 mRNA for WD repeat protein, WDR9-form2, complete
           cds
          Length = 7633

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 229 gctccagctcctgcaccagcacctgggc 202



to top

>dbj|AB080586.1| Homo sapiens WDR9 mRNA for WD repeat protein, WDR9-form1, complete
           cds
          Length = 9380

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 229 gctccagctcctgcaccagcacctgggc 202



to top

>gb|BT023594.1| Drosophila melanogaster IP09318 full insert cDNA
          Length = 973

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 244 cctgaggatggccgtgaactgtgc 267
           ||||||||||| ||||||||||||
Sbjct: 794 cctgaggatgggcgtgaactgtgc 771



to top

>gb|BC064602.1| Homo sapiens bromodomain and WD repeat domain containing 1,
           transcript variant 3, mRNA (cDNA clone IMAGE:5785347),
           complete cds
          Length = 2488

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 261 gctccagctcctgcaccagcacctgggc 234



to top

>gb|AF263245.1|AF263245 Micromonospora megalomicea subsp. nigra megalomicin biosynthetic gene
             cluster, partial sequence
          Length = 47981

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   ccaggcagggcgcgctggcc 526
             ||||||||||||||||||||
Sbjct: 38821 ccaggcagggcgcgctggcc 38840



to top

>ref|NM_001007246.1| Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1),
           transcript variant 3, mRNA
          Length = 2488

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 269 gctccagctcctgcaccagcacctgggc 242



to top

>ref|NM_033656.2| Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1),
           transcript variant 2, mRNA
          Length = 13003

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 269 gctccagctcctgcaccagcacctgggc 242



to top

>ref|NM_018963.3| Homo sapiens bromodomain and WD repeat domain containing 1 (BRWD1),
           transcript variant 1, mRNA
          Length = 8670

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 451 gctccacctcctgcacaagcacctgggc 478
           |||||| ||||||||| |||||||||||
Sbjct: 269 gctccagctcctgcaccagcacctgggc 242



to top

>gb|AE003594.3| Drosophila melanogaster chromosome 3L, section 75 of 83 of the complete
              sequence
          Length = 314904

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    cctgaggatggccgtgaactgtgc 267
              ||||||||||| ||||||||||||
Sbjct: 139940 cctgaggatgggcgtgaactgtgc 139963



to top

>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete
              sequence
          Length = 147533

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    gctgccgtggctcacgtcca 354
              ||||||||||||||||||||
Sbjct: 110494 gctgccgtggctcacgtcca 110513



to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     catcagcaaggcgccaagcc 293
               ||||||||||||||||||||
Sbjct: 3003518 catcagcaaggcgccaagcc 3003499



to top

>gb|AC132111.4| Mus musculus BAC clone RP24-200H19 from 14, complete sequence
          Length = 174164

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 244   cctgaggatggccgtgaact 263
             ||||||||||||||||||||
Sbjct: 96473 cctgaggatggccgtgaact 96454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,889,178
Number of Sequences: 3902068
Number of extensions: 4889178
Number of successful extensions: 98943
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98668
Number of HSP's gapped (non-prelim): 253
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top