ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23c03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1... 35 0.21
2ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 31 2.3
3ZAN_PIG (Q28983) Zonadhesin precursor 31 3.1
4ATX3_CAEEL (O17850) Ataxin-3 homolog (EC 3.4.22.-) (Machado-Jose... 30 4.0
5RPOE1_METJA (Q57840) DNA-directed RNA polymerase subunit E' (EC ... 30 4.0
6ATP6_DROSE (Q7IV45) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 30 6.8
7ATP6_DROYA (P00851) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 29 8.9
8ATP6_DROSI (P50269) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 29 8.9
9ATP6_DROME (P00850) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 29 8.9
10ATP6_DROMA (Q7IV55) ATP synthase a chain (EC 3.6.3.14) (ATPase p... 29 8.9

>DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 345

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 419 YFPVTLHVEDYKAFDPKRAYVFGYEPHSVLPIG 517
           YFP+ LH       D ++ Y+FGY PH ++ +G
Sbjct: 97  YFPIRLHKTT--ELDSEKNYIFGYHPHGIISLG 127



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>ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 226

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
 Frame = +2

Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361
           +F +T++  L  TLA  LWL  + +  +     +F  L+P+    M++       +  ++
Sbjct: 93  IFTSTSHLTLTLTLAFPLWLSFMLYGWICHTQHMFAHLVPQGTPPMLM--PFMVCIKTIS 150

Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436
           +  RPG    R  +  + G+  +TL
Sbjct: 151 NVIRPGTLAVRLTANMIAGHLLMTL 175



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>ZAN_PIG (Q28983) Zonadhesin precursor|
          Length = 2476

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +3

Query: 465  PKELTCLVMNRTLFCPSALGPSWTLLDSCHCQRPRFLQAPRC 590
            P   TCL +N   +CPS L       + C CQ+   L    C
Sbjct: 1468 PCPATCLSLNNPSYCPSTL----PCAEGCECQKGHILSGTSC 1505



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>ATX3_CAEEL (O17850) Ataxin-3 homolog (EC 3.4.22.-) (Machado-Joseph|
           disease-like protein)
          Length = 317

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/37 (43%), Positives = 16/37 (43%)
 Frame = -1

Query: 556 QWHESNKVQEGPKADGQNRVRFITKHVSSFGVKCFVV 446
           QW E N V  GPK      V      VSS G   FVV
Sbjct: 127 QWFELNSVNRGPKLLSDTYVSMFLHQVSSEGYSIFVV 163



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>RPOE1_METJA (Q57840) DNA-directed RNA polymerase subunit E' (EC 2.7.7.6)|
          Length = 187

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 416 GYFPVTLHVEDYKAFDPKRAYVFGYEPHSVLPIG 517
           G   V+  ++DY ++DPKR  + G E   VL IG
Sbjct: 106 GLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIG 139



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>ATP6_DROSE (Q7IV45) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 224

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +2

Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361
           +F +T++  L  +LAL LWL  + +  +     +F  L+P+   A+++       +  ++
Sbjct: 92  IFTSTSHLTLTLSLALPLWLCFMMYGWINHTQHMFAHLVPQGTPAVLM--PFMVCIETIS 149

Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436
           +  RPG    R  +  + G+  +TL
Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174



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>ATP6_DROYA (P00851) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 224

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +2

Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361
           +F +T++  L  +LAL LWL  + +  +     +F  L+P+   A+++       +  ++
Sbjct: 92  IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILM--PFMVCIETIS 149

Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436
           +  RPG    R  +  + G+  +TL
Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174



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>ATP6_DROSI (P50269) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 224

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +2

Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361
           +F +T++  L  +LAL LWL  + +  +     +F  L+P+   A+++       +  ++
Sbjct: 92  IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILM--PFMVCIETIS 149

Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436
           +  RPG    R  +  + G+  +TL
Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174



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>ATP6_DROME (P00850) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 224

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +2

Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361
           +F +T++  L  +LAL LWL  + +  +     +F  L+P+   A+++       +  ++
Sbjct: 92  IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILM--PFMVCIETIS 149

Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436
           +  RPG    R  +  + G+  +TL
Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174



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>ATP6_DROMA (Q7IV55) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)|
          Length = 224

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
 Frame = +2

Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361
           +F +T++  L  +LAL LWL  + +  +     +F  L+P+   A+++       +  ++
Sbjct: 92  IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAVLM--PFMVCIETIS 149

Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436
           +  RPG    R  +  + G+  +TL
Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,784,179
Number of Sequences: 219361
Number of extensions: 928502
Number of successful extensions: 3000
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3000
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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