Clone Name | bart23c03 |
---|---|
Clone Library Name | barley_pub |
>DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)| (Diglyceride acyltransferase) Length = 345 Score = 34.7 bits (78), Expect = 0.21 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +2 Query: 419 YFPVTLHVEDYKAFDPKRAYVFGYEPHSVLPIG 517 YFP+ LH D ++ Y+FGY PH ++ +G Sbjct: 97 YFPIRLHKTT--ELDSEKNYIFGYHPHGIISLG 127
>ATP6_AEDAL (Q5JCK5) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 226 Score = 31.2 bits (69), Expect = 2.3 Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 2/85 (2%) Frame = +2 Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361 +F +T++ L TLA LWL + + + +F L+P+ M++ + ++ Sbjct: 93 IFTSTSHLTLTLTLAFPLWLSFMLYGWICHTQHMFAHLVPQGTPPMLM--PFMVCIKTIS 150 Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436 + RPG R + + G+ +TL Sbjct: 151 NVIRPGTLAVRLTANMIAGHLLMTL 175
>ZAN_PIG (Q28983) Zonadhesin precursor| Length = 2476 Score = 30.8 bits (68), Expect = 3.1 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +3 Query: 465 PKELTCLVMNRTLFCPSALGPSWTLLDSCHCQRPRFLQAPRC 590 P TCL +N +CPS L + C CQ+ L C Sbjct: 1468 PCPATCLSLNNPSYCPSTL----PCAEGCECQKGHILSGTSC 1505
>ATX3_CAEEL (O17850) Ataxin-3 homolog (EC 3.4.22.-) (Machado-Joseph| disease-like protein) Length = 317 Score = 30.4 bits (67), Expect = 4.0 Identities = 16/37 (43%), Positives = 16/37 (43%) Frame = -1 Query: 556 QWHESNKVQEGPKADGQNRVRFITKHVSSFGVKCFVV 446 QW E N V GPK V VSS G FVV Sbjct: 127 QWFELNSVNRGPKLLSDTYVSMFLHQVSSEGYSIFVV 163
>RPOE1_METJA (Q57840) DNA-directed RNA polymerase subunit E' (EC 2.7.7.6)| Length = 187 Score = 30.4 bits (67), Expect = 4.0 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 416 GYFPVTLHVEDYKAFDPKRAYVFGYEPHSVLPIG 517 G V+ ++DY ++DPKR + G E VL IG Sbjct: 106 GLIHVSQIMDDYVSYDPKREAIIGKETGKVLEIG 139
>ATP6_DROSE (Q7IV45) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 224 Score = 29.6 bits (65), Expect = 6.8 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361 +F +T++ L +LAL LWL + + + +F L+P+ A+++ + ++ Sbjct: 92 IFTSTSHLTLTLSLALPLWLCFMMYGWINHTQHMFAHLVPQGTPAVLM--PFMVCIETIS 149 Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436 + RPG R + + G+ +TL Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174
>ATP6_DROYA (P00851) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 224 Score = 29.3 bits (64), Expect = 8.9 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361 +F +T++ L +LAL LWL + + + +F L+P+ A+++ + ++ Sbjct: 92 IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILM--PFMVCIETIS 149 Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436 + RPG R + + G+ +TL Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174
>ATP6_DROSI (P50269) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 224 Score = 29.3 bits (64), Expect = 8.9 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361 +F +T++ L +LAL LWL + + + +F L+P+ A+++ + ++ Sbjct: 92 IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILM--PFMVCIETIS 149 Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436 + RPG R + + G+ +TL Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174
>ATP6_DROME (P00850) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 224 Score = 29.3 bits (64), Expect = 8.9 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361 +F +T++ L +LAL LWL + + + +F L+P+ A+++ + ++ Sbjct: 92 IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAILM--PFMVCIETIS 149 Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436 + RPG R + + G+ +TL Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174
>ATP6_DROMA (Q7IV55) ATP synthase a chain (EC 3.6.3.14) (ATPase protein 6)| Length = 224 Score = 29.3 bits (64), Expect = 8.9 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +2 Query: 188 VFRATAYSPLRTTLALALWLGAIHFNVLLLLASIF--LLPRRVAAMVLGTQLFFMLVPVN 361 +F +T++ L +LAL LWL + + + +F L+P+ A+++ + ++ Sbjct: 92 IFTSTSHLTLTLSLALPLWLCFMLYGWINHTQHMFAHLVPQGTPAVLM--PFMVCIETIS 149 Query: 362 DKSRPGRKIARFISKYVVGYFPVTL 436 + RPG R + + G+ +TL Sbjct: 150 NIIRPGTLAVRLTANMIAGHLLLTL 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,784,179 Number of Sequences: 219361 Number of extensions: 928502 Number of successful extensions: 3000 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2937 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3000 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)