ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart23b09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock protein-1, complete cds Length = 1029 Score = 337 bits (170), Expect = 8e-90 Identities = 189/194 (97%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 8 tcggcggcgcaagatgcggggcgagggtcaagggaaccgtgaagtggttcaacgtcacca 67 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 49 tcggcggcgcaagatg-ggggagagggtcaagggaaccgtgaagtggttcaacgtcacca 107 Query: 68 aggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccg 127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 aggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccg 167 Query: 128 ccatcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagttcgatgtca 187 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 168 ccatcaagtccgacggctaccgcagcctcaacgagaacgacaccgtcgagttcgaggtca 227 Query: 188 tcaccggcgacgac 201 |||||||||||||| Sbjct: 228 tcaccggcgacgac 241
>dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock domain protein 3, complete cds Length = 1025 Score = 305 bits (154), Expect = 3e-80 Identities = 185/194 (95%), Gaps = 1/194 (0%) Strand = Plus / Plus Query: 8 tcggcggcgcaagatgcggggcgagggtcaagggaaccgtgaagtggttcaacgtcacca 67 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31 tcggcggcgcaagatg-ggggagagggtcaagggaaccgtgaagtggttcaacgtcacca 89 Query: 68 aggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccg 127 ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||| Sbjct: 90 aggggttcggcttcatctccccggacgacggcggcgaggaccttttcgtccaccagtccg 149 Query: 128 ccatcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagttcgatgtca 187 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| | | Sbjct: 150 ccatcaagtccgacggctaccgcagcctcaacgagaacgacgccgtcgagttcgagataa 209 Query: 188 tcaccggcgacgac 201 |||||||||||||| Sbjct: 210 tcaccggcgacgac 223
>dbj|AB161682.1| Triticum aestivum WCSP2 mRNA for cold shock domain protein 2, complete cds Length = 990 Score = 295 bits (149), Expect = 3e-77 Identities = 183/193 (94%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 9 cggcggcgcaagatgcggggcgagggtcaagggaaccgtgaagtggttcaacgtcaccaa 68 ||||||||||||||| || | ||| | ||||| |||||||||||||||||||| ||||| Sbjct: 47 cggcggcgcaagatg-ggtgagagactgaagggtaccgtgaagtggttcaacgtgaccaa 105 Query: 69 ggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 ggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgc 165 Query: 129 catcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagttcgatgtcat 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 166 catcaaggccgacggctaccgcagcctcaacgagaacgacgtcgtcgagttcgaggtcat 225 Query: 189 caccggcgacgac 201 ||||||||||||| Sbjct: 226 caccggcgacgac 238
>dbj|AB158409.1| Triticum aestivum GRP mRNA for putative glycine-rich protein, complete cds Length = 996 Score = 295 bits (149), Expect = 3e-77 Identities = 183/193 (94%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 9 cggcggcgcaagatgcggggcgagggtcaagggaaccgtgaagtggttcaacgtcaccaa 68 ||||||||||||||| || | ||| | ||||| |||||||||||||||||||| ||||| Sbjct: 47 cggcggcgcaagatg-ggtgagagactgaagggtaccgtgaagtggttcaacgtgaccaa 105 Query: 69 ggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106 ggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgc 165 Query: 129 catcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagttcgatgtcat 188 ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 166 catcaaggccgacggctaccgcagcctcaacgagaacgacgtcgtcgagttcgaggtcat 225 Query: 189 caccggcgacgac 201 ||||||||||||| Sbjct: 226 caccggcgacgac 238
>ref|XM_479920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 165 bits (83), Expect = 6e-38 Identities = 134/151 (88%) Strand = Plus / Plus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 150 cagcctcaacgagaacgacgtcgtcgagttc 180 |||||||||||| |||||||||||||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttc 251
>ref|XM_507115.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.112 mRNA Length = 984 Score = 165 bits (83), Expect = 6e-38 Identities = 134/151 (88%) Strand = Plus / Plus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 150 cagcctcaacgagaacgacgtcgtcgagttc 180 |||||||||||| |||||||||||||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttc 251
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 165 bits (83), Expect = 6e-38 Identities = 134/151 (88%) Strand = Plus / Minus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 1639560 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 1639501 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 1639500 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 1639441 Query: 150 cagcctcaacgagaacgacgtcgtcgagttc 180 |||||||||||| |||||||||||||||| Sbjct: 1639440 cagcctcaacgacggcgacgtcgtcgagttc 1639410 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Plus Query: 95 acggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||||||||||| ||||| Sbjct: 5852438 acggcggcgaggacctcttcgtccactagtcc 5852469
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 165 bits (83), Expect = 6e-38 Identities = 134/151 (88%) Strand = Plus / Minus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 39060 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 39001 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 39000 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 38941 Query: 150 cagcctcaacgagaacgacgtcgtcgagttc 180 |||||||||||| |||||||||||||||| Sbjct: 38940 cagcctcaacgacggcgacgtcgtcgagttc 38910
>dbj|AK101577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050L02, full insert sequence Length = 984 Score = 165 bits (83), Expect = 6e-38 Identities = 134/151 (88%) Strand = Plus / Plus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 150 cagcctcaacgagaacgacgtcgtcgagttc 180 |||||||||||| |||||||||||||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttc 251
>dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A08, full insert sequence Length = 963 Score = 165 bits (83), Expect = 6e-38 Identities = 134/151 (88%) Strand = Plus / Plus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||||||||| ||| |||||||||||||||||||||| |||| Sbjct: 101 gagggtgaaggggacggtgaagtggttcgacgccaccaaggggttcggcttcatcacccc 160 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||||| ||||||| |||||||||||||| ||| | ||||||||||||||||||| Sbjct: 161 cgacgacggcggcgaggatctcttcgtccaccaatcctcgctcaagtccgacggctaccg 220 Query: 150 cagcctcaacgagaacgacgtcgtcgagttc 180 |||||||||||| |||||||||||||||| Sbjct: 221 cagcctcaacgacggcgacgtcgtcgagttc 251
>ref|XM_463912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1219 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 139 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 198 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 199 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 243
>ref|XM_506692.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.21 mRNA Length = 1250 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 137 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 196 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 197 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 241
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 1104156 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 1104097 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 1104096 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 1104052
>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1020_C02 Length = 124578 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 56680 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 56621 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 56620 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 56576
>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0088N06 Length = 123454 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 92864 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 92805 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 92804 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 92760
>dbj|AK119758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F11, full insert sequence Length = 1219 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 139 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 198 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 199 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 243
>dbj|AK070711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061H10, full insert sequence Length = 1250 Score = 153 bits (77), Expect = 2e-34 Identities = 98/105 (93%) Strand = Plus / Plus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||| Sbjct: 137 gtgaagtggttcaacgacaccaaggggttcggcttcatctcccccgacgacggcagcgag 196 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgc 150 || |||||||||||||||||| |||||||| ||||||||| |||| Sbjct: 197 gatctcttcgtccaccagtcctccatcaaggccgacggcttccgc 241
>gb|BT016623.1| Zea mays clone Contig456 mRNA sequence Length = 1039 Score = 111 bits (56), Expect = 8e-22 Identities = 101/116 (87%) Strand = Plus / Plus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||||| |||||||| ||||| |||||| |||| || || || || ||| Sbjct: 89 gtgaagtggttcaacggaaccaagggcttcggtttcatcacccccgacgatgggagtgag 148 Query: 106 gacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 161 ||||| |||||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct: 149 gacctgttcgtccaccagtcatccatcaagtccgacggctaccgcagtcttaacga 204
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 83.8 bits (42), Expect = 2e-13 Identities = 123/150 (82%) Strand = Plus / Minus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||| | || ||| |||||| ||||||||||||||| | || Sbjct: 9401819 gagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatcactcc 9401760 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||| | |||||||||||||| ||||||||||| || |||||| ||||| ||| || Sbjct: 9401759 cgacgacgacggcgaggacctcttcatccaccagtcctccctcaagttcgacgactatcg 9401700 Query: 150 cagcctcaacgagaacgacgtcgtcgagtt 179 |||||||| || | ||| ||| ||||||| Sbjct: 9401699 gagcctcaatgacagcgatgtcatcgagtt 9401670
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 83.8 bits (42), Expect = 2e-13 Identities = 123/150 (82%) Strand = Plus / Minus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||| | || ||| |||||| ||||||||||||||| | || Sbjct: 99219 gagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatcactcc 99160 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||| | |||||||||||||| ||||||||||| || |||||| ||||| ||| || Sbjct: 99159 cgacgacgacggcgaggacctcttcatccaccagtcctccctcaagttcgacgactatcg 99100 Query: 150 cagcctcaacgagaacgacgtcgtcgagtt 179 |||||||| || | ||| ||| ||||||| Sbjct: 99099 gagcctcaatgacagcgatgtcatcgagtt 99070
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 83.8 bits (42), Expect = 2e-13 Identities = 123/150 (82%) Strand = Plus / Minus Query: 30 gagggtcaagggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||| ||||| || |||||| | || ||| |||||| ||||||||||||||| | || Sbjct: 9399940 gagggtgaaggggacggtgaagggttttgacgccaccaatgggttcggcttcatcactcc 9399881 Query: 90 ggaggacggcagcgaggacctcttcgtccaccagtccgccatcaagtccgacggctaccg 149 || |||| | |||||||||||||| ||||||||||| || |||||| ||||| ||| || Sbjct: 9399880 cgacgacgacggcgaggacctcttcatccaccagtcctccctcaagttcgacgactatcg 9399821 Query: 150 cagcctcaacgagaacgacgtcgtcgagtt 179 |||||||| || | ||| ||| ||||||| Sbjct: 9399820 gagcctcaatgacagcgatgtcatcgagtt 9399791
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 79.8 bits (40), Expect = 3e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 47 tgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgagg 106 ||||| ||||| ||| |||||| ||||||||||||||| | || || ||||| | |||| Sbjct: 158214 tgaaggggttcgacgccaccaatgggttcggcttcatcactcccgacaacggcggtgagg 158155 Query: 107 acctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 158 ||||||||||||||| |||| || |||||| |||| |||| || |||||||| Sbjct: 158154 acctcttcgtccaccggtcctccctcaagttcgacagctatcggagcctcaa 158103
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 79.8 bits (40), Expect = 3e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 47 tgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgagg 106 ||||| ||||| ||| |||||| ||||||||||||||| | || || ||||| | |||| Sbjct: 20910 tgaaggggttcgacgccaccaatgggttcggcttcatcactcccgacaacggcggtgagg 20851 Query: 107 acctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 158 ||||||||||||||| |||| || |||||| |||| |||| || |||||||| Sbjct: 20850 acctcttcgtccaccggtcctccctcaagttcgacagctatcggagcctcaa 20799
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 3e-12 Identities = 94/112 (83%) Strand = Plus / Minus Query: 47 tgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgagg 106 ||||| ||||| ||| |||||| ||||||||||||||| | || || ||||| | |||| Sbjct: 25916682 tgaaggggttcgacgccaccaatgggttcggcttcatcactcccgacaacggcggtgagg 25916623 Query: 107 acctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaa 158 ||||||||||||||| |||| || |||||| |||| |||| || |||||||| Sbjct: 25916622 acctcttcgtccaccggtcctccctcaagttcgacagctatcggagcctcaa 25916571
>ref|NM_193345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 531 Score = 75.8 bits (38), Expect = 5e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 70 gggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgcc 129 |||||| |||||||| | || || || ||||||||||| |||||| ||||||||||| || Sbjct: 286 gggttcagcttcatcactcccgacgatggcagcgaggatctcttcatccaccagtcctcc 345 Query: 130 atcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagtt 179 |||||| ||| ||||| || ||||||||||| |||| ||| ||||||| Sbjct: 346 ctcaagttcgatggctatcggagcctcaacgacgacgatgtcatcgagtt 395
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 5e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 70 gggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgcc 129 |||||| |||||||| | || || || ||||||||||| |||||| ||||||||||| || Sbjct: 20288751 gggttcagcttcatcactcccgacgatggcagcgaggatctcttcatccaccagtcctcc 20288810 Query: 130 atcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagtt 179 |||||| ||| ||||| || ||||||||||| |||| ||| ||||||| Sbjct: 20288811 ctcaagttcgatggctatcggagcctcaacgacgacgatgtcatcgagtt 20288860 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 103 gaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 161 ||||||||||||||| |||||| | || ||| ||||||||||||||| ||||||||||| Sbjct: 12355041 gaggacctcttcgtcaaccagtactccctcatgtccgacggctaccggagcctcaacga 12354983
>dbj|AP004231.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0026J14 Length = 163496 Score = 75.8 bits (38), Expect = 5e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 70 gggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtccgcc 129 |||||| |||||||| | || || || ||||||||||| |||||| ||||||||||| || Sbjct: 54784 gggttcagcttcatcactcccgacgatggcagcgaggatctcttcatccaccagtcctcc 54843 Query: 130 atcaagtccgacggctaccgcagcctcaacgagaacgacgtcgtcgagtt 179 |||||| ||| ||||| || ||||||||||| |||| ||| ||||||| Sbjct: 54844 ctcaagttcgatggctatcggagcctcaacgacgacgatgtcatcgagtt 54893
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 73.8 bits (37), Expect = 2e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||||||||| Sbjct: 1569266 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaggacggcagc 1569325 Query: 103 g 103 | Sbjct: 1569326 g 1569326 Score = 60.0 bits (30), Expect = 3e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 2921641 accgtgaagtggttcaacgatgccaagggcttcggcttcatcaccccgga 2921592
>gb|AE011765.1| Xanthomonas axonopodis pv. citri str. 306, section 143 of 469 of the complete genome Length = 10446 Score = 73.8 bits (37), Expect = 2e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||||||||| Sbjct: 2586 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaggacggcagc 2645 Query: 103 g 103 | Sbjct: 2646 g 2646
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 73.8 bits (37), Expect = 2e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||||||||||||| Sbjct: 1972271 accgtcaagtggttcaacgacgccaagggatttggcttcatctctccggaggacggcagc 1972330 Query: 103 g 103 | Sbjct: 1972331 g 1972331 Score = 46.1 bits (23), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||| |||| ||||||| |||||||||||| ||||||| Sbjct: 2882360 gtgaagtggtttaacgatgccaagggcttcggcttcatcaccccgga 2882314
>ref|NM_183796.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 103 gaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 161 ||||||||||||||| |||||| | || ||| ||||||||||||||| ||||||||||| Sbjct: 835 gaggacctcttcgtcaaccagtactccctcatgtccgacggctaccggagcctcaacga 893
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 69.9 bits (35), Expect = 3e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 103 gaggacctcttcgtccaccagtccgccatcaagtccgacggctaccgcagcctcaacga 161 ||||||||||||||| |||||| | || ||| ||||||||||||||| ||||||||||| Sbjct: 40686 gaggacctcttcgtcaaccagtactccctcatgtccgacggctaccggagcctcaacga 40628
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 65.9 bits (33), Expect = 4e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || || |||||||| ||||||||||||||| Sbjct: 1950247 accgtcaagtggttcaacgacgccaagggatttggtttcatctctccggaggacggcagc 1950306 Query: 103 g 103 | Sbjct: 1950307 g 1950307 Score = 46.1 bits (23), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||| |||| ||||||| |||||||||||| ||||||| Sbjct: 2860505 gtgaagtggtttaacgatgccaagggcttcggcttcatcaccccgga 2860459
>gb|AE005954.1| Caulobacter crescentus CB15 section 280 of 359 of the complete genome Length = 10098 Score = 65.9 bits (33), Expect = 4e-08 Identities = 69/81 (85%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggc 99 ||||||||||||||||||||| ||||||||| |||||||||||| || || ||||| Sbjct: 9966 ggaaccgtgaagtggttcaactccaccaagggcttcggcttcatccaacccgacaacggc 9907 Query: 100 agcgaggacctcttcgtccac 120 ||| |||| ||||||||||| Sbjct: 9906 ggcgcggacatcttcgtccac 9886
>gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 136 of 460 of the complete genome Length = 11820 Score = 65.9 bits (33), Expect = 4e-08 Identities = 54/61 (88%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||| ||||||||| Sbjct: 926 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaagacggcagc 985 Query: 103 g 103 | Sbjct: 986 g 986
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 65.9 bits (33), Expect = 4e-08 Identities = 54/61 (88%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || ||||||||||| ||||| ||||||||| Sbjct: 3540661 accgtcaagtggttcaacgacgccaagggatttggcttcatctcaccggaagacggcagc 3540602 Query: 103 g 103 | Sbjct: 3540601 g 3540601 Score = 48.1 bits (24), Expect = 0.010 Identities = 36/40 (90%) Strand = Plus / Minus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||| ||||||| |||||||||||| Sbjct: 3387316 cgtgaagtggttcaacgatgccaagggcttcggcttcatc 3387277 Score = 48.1 bits (24), Expect = 0.010 Identities = 42/48 (87%) Strand = Plus / Plus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 2221578 cgtgaagtggttcaatgatgccaagggcttcggcttcatcaccccgga 2221625
>gb|AY157846.2| Chlamydomonas reinhardtii putative nucleic acid binding protein (Nab1) gene, complete cds Length = 4339 Score = 61.9 bits (31), Expect = 7e-07 Identities = 43/47 (91%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||||||| ||||||||||||| |||||| || |||||||||||| Sbjct: 538 agggaaccgtaaagtggttcaacgccaccaaaggcttcggcttcatc 584
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 548783 accgtgaagtggttcaacgcaaccaaagggttcggcttcatc 548742 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||||| |||||||||| |||||| || |||||||||||| Sbjct: 624210 accgtgaaatggttcaacgccaccaaaggtttcggcttcatc 624251 Score = 44.1 bits (22), Expect = 0.16 Identities = 64/78 (82%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 |||||||| ||||||||| || ||||| |||||||||||| |||| || || ||| || Sbjct: 2119532 accgtgaaatggttcaacagtacgaagggcttcggcttcatcgcccccgatgatggcggc 2119591 Query: 103 gaggacctcttcgtccac 120 ||||| | ||||||||| Sbjct: 2119592 aaggacgttttcgtccac 2119609
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 60.0 bits (30), Expect = 3e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccac 120 |||||||||||||||||| ||||||| ||||||||| ||| ||||||||||| Sbjct: 2312652 aaggggttcggcttcatcgccccggatgacggcagcaccgacgtcttcgtccac 2312705 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacg 61 |||||||||||||||||||||| Sbjct: 1869038 ggaaccgtgaagtggttcaacg 1869017
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 3903319 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 3903364 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggaaccgtgaagtggttcaa 59 |||||||||||||||||||| Sbjct: 3613284 ggaaccgtgaagtggttcaa 3613303
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 60.0 bits (30), Expect = 3e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||| ||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 1679620 accgttaagtggttcaacgacgccaagggcttcggcttcatcaccccgga 1679669 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Plus Query: 52 tggttcaacgtcaccaaggggttcggcttcatc 84 |||||||||| | ||||||| |||||||||||| Sbjct: 2109891 tggttcaacgacgccaagggcttcggcttcatc 2109923
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 306461 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 306506 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 40 ggaaccgtgaagtggttcaacg 61 |||||||||||||||||||||| Sbjct: 274 ggaaccgtgaagtggttcaacg 295
>gb|DQ122905.1| Chlamydomonas incerta putative nucleic acid-binding protein (nab1) mRNA, partial cds Length = 711 Score = 60.0 bits (30), Expect = 3e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 |||||||||| ||||||||||||| ||| || || |||||||||||| | || | | | Sbjct: 56 agggaaccgtaaagtggttcaacgccactaaaggcttcggcttcatcacgcctggtggtg 115 Query: 98 gcagcgaggacctcttcgtccaccag 123 || ||||||||||||| ||||||||| Sbjct: 116 gcggcgaggacctctttgtccaccag 141
>gb|AE011876.1| Xanthomonas axonopodis pv. citri str. 306, section 254 of 469 of the complete genome Length = 10716 Score = 60.0 bits (30), Expect = 3e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||||||||||| ||||||| |||||||||||| ||||||| Sbjct: 6046 accgtgaagtggttcaacgatgccaagggcttcggcttcatcaccccgga 5997
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||||||| |||||||| | |||||||||| Sbjct: 2051855 gggaaccgtgaagtggttcaacgcgaccaagggctacggcttcatc 2051810
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||||||||||||||||| | | ||||| |||||||||||| ||| ||| ||||| || Sbjct: 296129 accgtgaagtggttcaacgacgcgaagggcttcggcttcatcacccaggacgacggtggc 296070 Query: 103 gaggac 108 |||||| Sbjct: 296069 gaggac 296064 Score = 58.0 bits (29), Expect = 1e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgag 105 |||||||||||||| | | | ||||| |||||||||||||||| ||| | ||| ||||| Sbjct: 1475167 gtgaagtggttcaatgacgcgaagggcttcggcttcatctcccaggacggtggcggcgag 1475108 Query: 106 gacctcttcgtccacca 122 ||| | ||||||||||| Sbjct: 1475107 gacgtgttcgtccacca 1475091 Score = 54.0 bits (27), Expect = 2e-04 Identities = 84/103 (81%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||||||||||||||||| | ||||| |||||||||||| ||| ||| | |||| || Sbjct: 3618871 accgtgaagtggttcaacgatgcgaagggcttcggcttcatcacccaggacggcggcggc 3618812 Query: 103 gaggacctcttcgtccaccagtccgccatcaagtccgacggct 145 |||||| | ||| |||||| |||||||| || |||| |||| Sbjct: 3618811 gaggacgtgttctgccaccacaccgccatccaggccgagggct 3618769 Score = 48.1 bits (24), Expect = 0.010 Identities = 45/52 (86%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggagg 94 ||||||||||||||||||| | | ||||| | ||| |||||||||| ||||| Sbjct: 1431466 accgtgaagtggttcaacgacgcgaagggttacggtttcatctcccaggagg 1431517 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 1137017 accgtgaagtggttcaacgatgcgaagggcttcggcttcatc 1136976
>gb|AF098529.1|AF098529 Myxococcus xanthus CspB (cspB) gene, complete cds Length = 825 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||| | ||||||||||||| |||||| Sbjct: 245 accgtgaagtggttcaacgacgccaaggggttcggattcatc 286
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1450531 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1450575 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||| ||||||||| ||||||||| Sbjct: 1228943 aagtggttcaaccgcaccaagggtttcggcttc 1228911
>gb|AE009494.1| Brucella melitensis 16M chromosome I, section 51 of 195 of the complete sequence Length = 10029 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 296 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 252
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| || ||||||||||||| ||||||||| |||||||||||| Sbjct: 2052416 ggaacggtcaagtggttcaacgccaccaagggcttcggcttcatc 2052460 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||| ||||||||| ||||||||| Sbjct: 118599 aagtggttcaaccgcaccaagggcttcggcttc 118631
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1468594 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1468638 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||| ||||||||| ||||||||| Sbjct: 1247052 aagtggttcaaccgcaccaagggtttcggcttc 1247020
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 |||||| ||||||||||||||| ||||||||| ||||||||||| Sbjct: 1465748 gggaacagtgaagtggttcaacaccaccaagggcttcggcttcat 1465792 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||| ||||||||| ||||||||| Sbjct: 1244202 aagtggttcaaccgcaccaagggtttcggcttc 1244170
>dbj|AP006113.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT45A24, TM0197, complete sequence Length = 112846 Score = 56.0 bits (28), Expect = 4e-05 Identities = 70/84 (83%) Strand = Plus / Plus Query: 66 caaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtc 125 |||||| |||||||||||| || || |||||| | || || |||||||||||||| || Sbjct: 106960 caagggtttcggcttcatcaagcccgatgacggcggagaagatctcttcgtccaccaatc 107019 Query: 126 cgccatcaagtccgacggctaccg 149 | |||||| |||||||||||||| Sbjct: 107020 ctccatcagatccgacggctaccg 107043
>gb|AF317639.1| Marsilea strigosa microsatellite IIIB8 sequence Length = 430 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||| ||||||||| |||||||||||| Sbjct: 64 gtgaagtggttcaacagcaccaagggcttcggcttcatc 26
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 54.0 bits (27), Expect = 2e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggac 108 ||||||||||||| | | ||||| ||||||||||| | ||||| || ||||||||||| Sbjct: 2658257 aagtggttcaacgactcgaagggcttcggcttcattactccggacgatggcagcgaggat 2658316 Query: 109 ctcttcg 115 ||||||| Sbjct: 2658317 ctcttcg 2658323 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| ||||||||||||| | ||||||| ||||| |||||| Sbjct: 1088053 accgtaaagtggttcaacgactccaagggcttcggtttcatc 1088012 Score = 40.1 bits (20), Expect = 2.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||| | | ||||||| ||||| |||||| ||||||| Sbjct: 2055899 aagtggttcaatgactccaagggcttcggtttcatcaccccgga 2055856
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||||||||||||| ||||||||| ||||| |||||| Sbjct: 4757570 gtgaagtggttcaacgccaccaagggcttcggtttcatc 4757608 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Plus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggg 71 |||||||||||||||||| |||| |||||||| Sbjct: 4127930 gggaaccgtgaagtggtttaacgcgaccaaggg 4127962
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 54.0 bits (27), Expect = 2e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggac 108 ||||||| ||||| ||| ||||| |||||||||||| ||||||| |||| || ||||| Sbjct: 69712 aagtggtacaacgccacgaagggcttcggcttcatcaccccggaatccggcggcaaggac 69771 Query: 109 ctcttcgtcca 119 |||||||||| Sbjct: 69772 atcttcgtcca 69782 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||| ||| ||||| ||||| |||||| Sbjct: 903515 aagtggttcaacgccacgaagggcttcggtttcatc 903480
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 88 ||||| |||||||||||| | ||||||| |||||||||||||||| Sbjct: 1589861 accgtaaagtggttcaacacctccaagggcttcggcttcatctccc 1589816
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| ||||||||||||| | ||||||| |||||||||||| Sbjct: 579528 accgttaagtggttcaacgacgccaagggcttcggcttcatc 579487 Score = 46.1 bits (23), Expect = 0.041 Identities = 32/35 (91%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcat 83 ||||||||||||| |||||||| ||||||||||| Sbjct: 2435328 aagtggttcaacgagaccaagggtttcggcttcat 2435294 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||| | ||||||| || ||||||||| Sbjct: 2432261 aagtggttcaacgacgccaagggctttggcttcatc 2432296
>gb|AC084622.1|CBRG44P20 Caenorhabditis briggsae cosmid G44P20, complete sequence Length = 39166 Score = 52.0 bits (26), Expect = 7e-04 Identities = 29/30 (96%) Strand = Plus / Plus Query: 33 ggtcaagggaaccgtgaagtggttcaacgt 62 ||||||||||||||| |||||||||||||| Sbjct: 23189 ggtcaagggaaccgtcaagtggttcaacgt 23218
>gb|AF281675.1|AF281675 Mycobacterium smegmatis cold-shock protein CspA (cspA) gene, complete cds Length = 204 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| ||||| |||||||||||| |||| ||||||| Sbjct: 8 agggaactgtgaagtggttcaacgcggagaagggcttcggcttcatcgcccccgaggacg 67 Query: 98 gc 99 || Sbjct: 68 gc 69
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Minus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||||||||||||||| |||| |||||||| || ||||||||| Sbjct: 1576785 gggaaccgtgaagtggtttaacgcgaccaagggctttggcttcatc 1576740
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 52.0 bits (26), Expect = 7e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| |||||||||||||||||| | || ||||||| Sbjct: 379282 agggaactgtgaagtggttcaacgcggagaaggggttcggcttcatcgcgcccgaggacg 379341 Query: 98 gc 99 || Sbjct: 379342 gc 379343 Score = 40.1 bits (20), Expect = 2.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||| | ||||| |||||||||||| Sbjct: 3641681 cgtgaagtggttcaacggcgagaagggcttcggcttcatc 3641642
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 52.0 bits (26), Expect = 7e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 88 |||||||||||||||||| | | ||||| |||||||||||||||| Sbjct: 4395536 accgtgaagtggttcaacacctcgaagggcttcggcttcatctccc 4395581
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 52.0 bits (26), Expect = 7e-04 Identities = 68/82 (82%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| ||||| |||||||||| ||||| |||||||||||| |||| || |||| Sbjct: 691504 agggaactgtgaaatggttcaacggtgaaaagggcttcggcttcatcacccctgacgacg 691563 Query: 98 gcagcgaggacctcttcgtcca 119 ||| |||||||||||||||| Sbjct: 691564 gcacgaaggacctcttcgtcca 691585 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 168 cgtcgtcgagttcgatgtcatc 189 |||||||||||||||||||||| Sbjct: 654638 cgtcgtcgagttcgatgtcatc 654659 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacg 61 ||||||| |||||||||||||||| Sbjct: 448253 agggaactgtgaagtggttcaacg 448276
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 |||||||||||||||||| |||| |||||||| | ||||||||| Sbjct: 350436 gggaaccgtgaagtggtttaacgcaaccaagggctacggcttcat 350392
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 90020 accgtaaagtggttcaacagcaccaagggcttcggcttcat 90060
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 134331 accgtaaagtggttcaacagcaccaagggcttcggcttcat 134371 Score = 42.1 bits (21), Expect = 0.64 Identities = 39/45 (86%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| || |||||||||||| ||||||||| ||||| |||||| Sbjct: 185181 ggaacggtaaagtggttcaacagcaccaagggcttcggtttcatc 185137
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 39 gggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 |||||||||||||||||| |||| |||||||| | ||||||||| Sbjct: 439414 gggaaccgtgaagtggtttaacgcgaccaagggctacggcttcat 439370 Score = 42.1 bits (21), Expect = 0.64 Identities = 36/41 (87%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggctt 80 ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 2791626 ggaacagtgaagtggttcaacgcgacaaagggcttcggctt 2791586 Score = 42.1 bits (21), Expect = 0.64 Identities = 36/41 (87%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggctt 80 ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 894163 ggaacagtgaagtggttcaacgcgacaaagggcttcggctt 894123
>gb|AF030523.1|AF030523 Sinorhizobium meliloti putative periplasmic iron-binding protein (afuA), cold shock protein CspA (cspA), and probable ribosomal protein (rpsU) genes, complete cds Length = 2489 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 ||||| |||||||||||| ||||||||| ||||||||||| Sbjct: 1392 accgtaaagtggttcaacagcaccaagggcttcggcttcat 1432
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 50.1 bits (25), Expect = 0.003 Identities = 61/73 (83%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | | ||||| |||||||| || ||||||| || ||| || Sbjct: 1334923 accgtcaagtggttcaacgacgctaagggtttcggctttattaccccggatgaaggcggc 1334982 Query: 103 gaggacctcttcg 115 |||||||| |||| Sbjct: 1334983 gaggaccttttcg 1334995
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 48.1 bits (24), Expect = 0.010 Identities = 54/64 (84%) Strand = Plus / Plus Query: 52 tggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggacctc 111 |||||||||| |||||| || | |||||||||||| ||||| || || |||| |||||| Sbjct: 2811734 tggttcaacgacaccaaaggctacggcttcatctctccggatgatggtggcgatgacctc 2811793 Query: 112 ttcg 115 |||| Sbjct: 2811794 ttcg 2811797
>gb|AE009135.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 161 of 256 of the complete sequence Length = 11907 Score = 48.1 bits (24), Expect = 0.010 Identities = 36/40 (90%) Strand = Plus / Plus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 8495 cgtgaaatggttcgacgtcgccaagggtttcggcttcatc 8534
>gb|AE012336.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 244 of 460 of the complete genome Length = 10286 Score = 48.1 bits (24), Expect = 0.010 Identities = 42/48 (87%) Strand = Plus / Minus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||||||||||||| | ||||||| |||||||||||| ||||||| Sbjct: 4466 cgtgaagtggttcaatgatgccaagggcttcggcttcatcaccccgga 4419
>gb|AE012242.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 150 of 460 of the complete genome Length = 10405 Score = 48.1 bits (24), Expect = 0.010 Identities = 36/40 (90%) Strand = Plus / Plus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||| ||||||| |||||||||||| Sbjct: 2162 cgtgaagtggttcaacgatgccaagggcttcggcttcatc 2201
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||| ||||| ||||||| |||||||||||| Sbjct: 1968616 aagtggttcgacgtcgccaagggcttcggcttcatc 1968651 Score = 46.1 bits (23), Expect = 0.041 Identities = 32/35 (91%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcat 83 ||||||||||||| |||||||| ||||||||||| Sbjct: 582446 aagtggttcaacgcaaccaagggcttcggcttcat 582480 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||| | ||||||||| || ||||||||| Sbjct: 1224150 aagtggttcaatggcaccaagggttttggcttcatc 1224185
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 48.1 bits (24), Expect = 0.010 Identities = 36/40 (90%) Strand = Plus / Plus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||| |||||| ||||| ||||||| |||||||||||| Sbjct: 1788340 cgtgaaatggttcgacgtcgccaagggtttcggcttcatc 1788379
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Plus Query: 95 acggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||||||||||| ||||| Sbjct: 39548 acggcggcgaggacctcttcgtccactagtcc 39579
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 48.1 bits (24), Expect = 0.010 Identities = 30/32 (93%) Strand = Plus / Plus Query: 95 acggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||||||||||| ||||| Sbjct: 106583 acggcggcgaggacctcttcgtccactagtcc 106614
>ref|NM_120029.2| Arabidopsis thaliana GRP2; nucleic acid binding AT4G38680 (GRP2) mRNA, complete cds Length = 1299 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 395 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 454 Query: 127 gccatca 133 |||||| Sbjct: 455 tccatca 461
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 46.1 bits (23), Expect = 0.041 Identities = 41/47 (87%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 ||||| ||||||||||||| |||||||| || || ||||||||||| Sbjct: 1641277 accgtcaagtggttcaacgaaaccaagggctttggtttcatctcccc 1641323
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.041 Identities = 35/39 (89%) Strand = Plus / Plus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 ||||||||||||||||| | ||||||| | ||||||||| Sbjct: 1256698 cgtgaagtggttcaacgacgccaagggctacggcttcat 1256736
>gb|AE009243.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 13 of 187 of the complete sequence Length = 11036 Score = 46.1 bits (23), Expect = 0.041 Identities = 32/35 (91%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcat 83 |||||||| |||| ||||||||| ||||||||||| Sbjct: 164 aagtggtttaacgccaccaagggcttcggcttcat 198
>gb|AE008371.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 175 of 187 of the complete sequence Length = 11967 Score = 46.1 bits (23), Expect = 0.041 Identities = 32/35 (91%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcat 83 |||||||| |||| ||||||||| ||||||||||| Sbjct: 1308 aagtggtttaacgccaccaagggcttcggcttcat 1274
>gb|AY040049.1| Arabidopsis thaliana putative glycine-rich protein 2 (At4g38680) mRNA, complete cds Length = 612 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 64 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 123 Query: 127 gccatca 133 |||||| Sbjct: 124 tccatca 130
>gb|AF360202.1| Arabidopsis thaliana putative glycine-rich protein GRP2 (At4g38680) mRNA, complete cds Length = 929 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 138 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 197 Query: 127 gccatca 133 |||||| Sbjct: 198 tccatca 204
>emb|BX248354.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment 1/8 Length = 348517 Score = 46.1 bits (23), Expect = 0.041 Identities = 68/83 (81%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| || || |||||||||||| | |||||||||| Sbjct: 285659 agggaactgtgaagtggttcaacgctgaaaaaggtttcggcttcatcgctccggaggacg 285718 Query: 98 gcagcgaggacctcttcgtccac 120 || || ||| ||||||||||| Sbjct: 285719 gctccgctgacgtcttcgtccac 285741
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 46.1 bits (23), Expect = 0.041 Identities = 77/95 (81%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggc 99 |||||||||||||||||||||| | ||||| || || |||||| ||| ||| | |||| Sbjct: 96494 ggaaccgtgaagtggttcaacgccgaaaagggctttggtttcatcgcccaggaaggcggc 96435 Query: 100 agcgaggacctcttcgtccaccagtccgccatcaa 134 || |||| ||||||||||| | ||||| ||||| Sbjct: 96434 ggcccggacgtcttcgtccactactccgcgatcaa 96400
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Minus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 181730 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 181671 Query: 127 gccatca 133 |||||| Sbjct: 181670 tccatca 181664
>emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome 4, BAC clone T9A14 (ESSA project) Length = 88164 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Minus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 19357 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 19298 Query: 127 gccatca 133 |||||| Sbjct: 19297 tccatca 19291
>gb|AY133591.1| Arabidopsis thaliana AT4g38680/F20M13_240 mRNA, complete cds Length = 612 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 64 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 123 Query: 127 gccatca 133 |||||| Sbjct: 124 tccatca 130
>gb|S47408.1| glycine-rich protein {clone atGRP-2} [Arabidopsis thaliana, C24, mRNA, 965 nt] Length = 965 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 119 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 178 Query: 127 gccatca 133 |||||| Sbjct: 179 tccatca 185
>gb|AF385696.1|AF385696 Arabidopsis thaliana AT4g38680/F20M13_240 mRNA, complete cds Length = 1089 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 394 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 453 Query: 127 gccatca 133 |||||| Sbjct: 454 tccatca 460
>gb|AC160211.1| Genomic seqeunce for Zea mays BAC clone ZMMBBb0448F23, complete sequence Length = 132549 Score = 46.1 bits (23), Expect = 0.041 Identities = 26/27 (96%) Strand = Plus / Minus Query: 90 ggaggacggcagcgaggacctcttcgt 116 ||||||||| ||||||||||||||||| Sbjct: 1716 ggaggacgggagcgaggacctcttcgt 1690
>gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana Clone T26G08 From Chromosome IV, complete sequence Length = 94770 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Plus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 61546 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 61605 Query: 127 gccatca 133 |||||| Sbjct: 61606 tccatca 61612
>gb|AC157487.1| Genomic sequence for Zea mays clone ZMMBBb0614J24, from chromosome 8, complete sequence Length = 136932 Score = 46.1 bits (23), Expect = 0.041 Identities = 26/27 (96%) Strand = Plus / Minus Query: 90 ggaggacggcagcgaggacctcttcgt 116 ||||||||| ||||||||||||||||| Sbjct: 90037 ggaggacgggagcgaggacctcttcgt 90011
>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone F20M13 (ESSA project) Length = 91938 Score = 46.1 bits (23), Expect = 0.041 Identities = 56/67 (83%) Strand = Plus / Minus Query: 67 aaggggttcggcttcatctccccggaggacggcagcgaggacctcttcgtccaccagtcc 126 ||||| |||||||||||| | || || ||||| |||| || |||||||| ||||||||| Sbjct: 82671 aagggtttcggcttcatcactcctgacgacggtggcgacgatctcttcgttcaccagtcc 82612 Query: 127 gccatca 133 |||||| Sbjct: 82611 tccatca 82605
>gb|L41167.1|ARGCSP Arthrobacter globiformis strain SI55 cold shock protein (CSP) gene, complete cds Length = 914 Score = 46.1 bits (23), Expect = 0.041 Identities = 47/55 (85%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 |||||||||| ||||||||||||| ||||| |||||||||||| ||||||| Sbjct: 310 agggaaccgtcaagtggttcaacgctgaaaagggcttcggcttcatcaccccgga 364
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 44.1 bits (22), Expect = 0.16 Identities = 43/50 (86%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||| ||||||||||| | | | ||||| |||||||||||| ||||||| Sbjct: 464543 accgtcaagtggttcaatgacgcaaagggcttcggcttcatcaccccgga 464494
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 |||||||| |||||||||| || || ||||||||||||||| Sbjct: 733316 accgtgaaatggttcaacgcaactaaagggttcggcttcatc 733357
>gb|AY658323.1| Synthetic construct Peudomonas aeruginosa clone FLH044127.01F PA3266 gene, partial cds Length = 210 Score = 44.1 bits (22), Expect = 0.16 Identities = 43/50 (86%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 22 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 71
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 547592 accgtcaagtggttcaacgagaccaagggttttggcttcatc 547551
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 44.1 bits (22), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 88 ||||| |||||||||||| | ||||||| |||||||| ||||||| Sbjct: 4329135 accgtaaagtggttcaacacctccaagggcttcggctttatctccc 4329180
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.16 Identities = 43/50 (86%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||| ||||||||||||| || ||| || || ||||||||| ||||||| Sbjct: 285259 accgttaagtggttcaacgacagcaaaggctttggcttcatcaccccgga 285210
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 1866879 accgtcaagtggttcaacgagaccaagggttttggcttcatc 1866838
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||| | ||||| |||||||||||| Sbjct: 187402 accgtgaagtggttcaacgccgaaaagggcttcggcttcatc 187443
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccc 88 |||||||||||||||||| | ||||||| ||||| || ||||||| Sbjct: 5507635 accgtgaagtggttcaacacctccaagggcttcggttttatctccc 5507680
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| ||||||||||||| |||||||| || ||||||||| Sbjct: 916421 accgtcaagtggttcaacgagaccaagggttttggcttcatc 916462
>gb|AE004749.1| Pseudomonas aeruginosa PAO1, section 310 of 529 of the complete genome Length = 16841 Score = 44.1 bits (22), Expect = 0.16 Identities = 43/50 (86%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 1699 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 1748
>gb|AF098532.1|AF098532 Myxococcus xanthus CspE (cspE) gene, complete cds Length = 1067 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||||||||||||| | | ||||| || ||||||||| Sbjct: 529 accgtgaagtggttcaacgacgcgaagggctttggcttcatc 570
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.16 Identities = 34/38 (89%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatctc 86 ||||||||||||| | ||||||| || ||||||||||| Sbjct: 2675430 aagtggttcaacgacgccaagggttttggcttcatctc 2675467
>gb|U82822.1|PAU82822 Pseudomonas aeruginosa major cold shock protein CspA (cspA) gene, complete cds Length = 508 Score = 44.1 bits (22), Expect = 0.16 Identities = 43/50 (86%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccgga 92 ||||| || |||||||||| | |||| || |||||||||||| ||||||| Sbjct: 262 accgtaaaatggttcaacgacgccaaaggcttcggcttcatcaccccgga 311
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940136D9, complete sequence Length = 121820 Score = 42.1 bits (21), Expect = 0.64 Identities = 48/57 (84%) Strand = Plus / Minus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcag 101 |||||||||||||||| | |||||||||||||||||| | || || |||||||| Sbjct: 66072 cgtgaagtggttcaactccgagaaggggttcggcttcatcgctcccgaagacggcag 66016
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 0.64 Identities = 60/73 (82%) Strand = Plus / Minus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || || |||||| | ||||| | |||| || Sbjct: 2881730 accgtcaagtggttcaacgacgccaagggttttggtttcatcacgccggaaggcggcggc 2881671 Query: 103 gaggacctcttcg 115 || || ||||||| Sbjct: 2881670 gaagatctcttcg 2881658
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 0.64 Identities = 51/61 (83%) Strand = Plus / Minus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| |||||||||||||| ||| |||| || |||| Sbjct: 4080766 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccccgaagacg 4080707 Query: 98 g 98 | Sbjct: 4080706 g 4080706
>ref|XM_588880.2| PREDICTED: Bos taurus similar to RNA-binding protein LIN-28 (LOC539705), mRNA Length = 606 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||||| ||| ||||||||||||| Sbjct: 109 aagtggttcaacgtgcccatggggttcggcttc 141
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 0.64 Identities = 60/73 (82%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || || |||||| | ||||| | |||| || Sbjct: 3931685 accgtcaagtggttcaacgacgccaagggttttggtttcatcacgccggaaggcggcggc 3931744 Query: 103 gaggacctcttcg 115 || || ||||||| Sbjct: 3931745 gaagatctcttcg 3931757
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 42.1 bits (21), Expect = 0.64 Identities = 51/61 (83%) Strand = Plus / Minus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 |||||||||| ||||||||||||| ||||| || ||||||||| ||||||| |||| Sbjct: 2283249 agggaaccgtcaagtggttcaacgcggagaagggctttggcttcatcgccccggacgacg 2283190 Query: 98 g 98 | Sbjct: 2283189 g 2283189
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 42.1 bits (21), Expect = 0.64 Identities = 33/37 (89%) Strand = Plus / Minus Query: 45 cgtgaagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||||||| |||||||| ||||||||| Sbjct: 77836 cgtgaagtggttcaaccgaaccaagggattcggcttc 77800 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 49 aagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||||||| |||| ||||||| |||||||||||| Sbjct: 78108 aagtggttcgacgttgccaagggtttcggcttcatc 78073
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 0.64 Identities = 51/61 (83%) Strand = Plus / Minus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| |||||||||||||| ||| |||| || |||| Sbjct: 271348 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccccgaagacg 271289 Query: 98 g 98 | Sbjct: 271288 g 271288
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 0.64 Identities = 60/73 (82%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagc 102 ||||| ||||||||||||| | ||||||| || || |||||| | ||||| | |||| || Sbjct: 3673631 accgtcaagtggttcaacgacgccaagggttttggtttcatcacgccggaaggcggcggc 3673690 Query: 103 gaggacctcttcg 115 || || ||||||| Sbjct: 3673691 gaagatctcttcg 3673703
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 0.64 Identities = 51/61 (83%) Strand = Plus / Minus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| |||||||||||||| ||| |||| || |||| Sbjct: 274761 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccccgaagacg 274702 Query: 98 g 98 | Sbjct: 274701 g 274701
>emb|AL672112.1|MLO672112 Mesorhizobium loti R7A symbiosis island; segment 1/4 Length = 150050 Score = 42.1 bits (21), Expect = 0.64 Identities = 39/45 (86%) Strand = Plus / Minus Query: 40 ggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatc 84 ||||| ||||||||||||||| |||||| || || ||||||||| Sbjct: 74107 ggaacagtgaagtggttcaacagcaccaaaggttttggcttcatc 74063
>emb|AL583917.1|MLEPRTN1 Mycobacterium leprae strain TN complete genome; segment 1/10 Length = 344050 Score = 42.1 bits (21), Expect = 0.64 Identities = 51/61 (83%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| |||||||||||||| ||| |||| || |||| Sbjct: 264905 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccccgaagacg 264964 Query: 98 g 98 | Sbjct: 264965 g 264965
>emb|AL023093.1|MLCB2548 Mycobacterium leprae cosmid B2548 Length = 38916 Score = 42.1 bits (21), Expect = 0.64 Identities = 51/61 (83%) Strand = Plus / Minus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctccccggaggacg 97 ||||||| |||||||||||||||| |||||||||||||| ||| |||| || |||| Sbjct: 37133 agggaactgtgaagtggttcaacgcggagaaggggttcggctttatcgcccccgaagacg 37074 Query: 98 g 98 | Sbjct: 37073 g 37073
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||| ||||||||| ||||||||| Sbjct: 114597 aagtggttcaaccgcaccaagggtttcggcttc 114629
>gb|AE005742.1| Caulobacter crescentus CB15 section 68 of 359 of the complete genome Length = 12842 Score = 42.1 bits (21), Expect = 0.64 Identities = 36/41 (87%) Strand = Plus / Plus Query: 43 accgtgaagtggttcaacgtcaccaaggggttcggcttcat 83 ||||| ||||||||||||| | ||||||| || |||||||| Sbjct: 7272 accgtaaagtggttcaacgccgccaagggctttggcttcat 7312
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 0.64 Identities = 57/69 (82%) Strand = Plus / Minus Query: 52 tggttcaacgtcaccaaggggttcggcttcatctccccggaggacggcagcgaggacctc 111 ||||||||| |||||| || || || |||||| ||||||| |||||| || | ||| || Sbjct: 1056420 tggttcaacaccaccaaaggatttgggttcatcgccccggatgacggcggcaaagacgtc 1056361 Query: 112 ttcgtccac 120 ||||||||| Sbjct: 1056360 ttcgtccac 1056352 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cgcaagatgcggggcgaggg 34 |||||||||||||||||||| Sbjct: 266381 cgcaagatgcggggcgaggg 266400
>gb|AE009515.1| Brucella melitensis 16M chromosome I, section 72 of 195 of the complete sequence Length = 10735 Score = 42.1 bits (21), Expect = 0.64 Identities = 30/33 (90%) Strand = Plus / Plus Query: 49 aagtggttcaacgtcaccaaggggttcggcttc 81 |||||||||||| ||||||||| ||||||||| Sbjct: 2146 aagtggttcaaccgcaccaagggtttcggcttc 2178
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggaaccgtgaagtggttcaa 59 |||||||||||||||||||| Sbjct: 2964178 ggaaccgtgaagtggttcaa 2964197
>gb|DQ078045.1| Uncultured bacterium clone OilUp-10330 NifH (nifH) gene, partial cds Length = 362 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gtcgtcgagttcgatgtcatcacc 192 |||||||||||||||||| ||||| Sbjct: 105 gtcgtcgagttcgatgtcttcacc 82
>gb|DQ356249.1| Ostertagia ostertagi clone Oo10 depsiphilin mRNA, complete cds Length = 2988 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gagaacgacgtcgtcgagtt 179 |||||||||||||||||||| Sbjct: 1289 gagaacgacgtcgtcgagtt 1308
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 2.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 38 agggaaccgtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 ||||||| |||||||||||||||| ||||| |||||||||||| |||| Sbjct: 2912875 agggaactgtgaagtggttcaacgctgagaagggcttcggcttcatcgcccc 2912926
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 40.1 bits (20), Expect = 2.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 63747 gtgaagtggttcaacggagagaagggattcggcttcatctcccc 63704
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 2.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 46 gtgaagtggttcaacgtcaccaaggggttcggcttcatctcccc 89 |||||||||||||||| ||||| ||||||||||||||||| Sbjct: 63747 gtgaagtggttcaacggagagaagggattcggcttcatctcccc 63704
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 91 gaggacggcagcgaggacctcttc 114 |||||||| ||||||||||||||| Sbjct: 205457 gaggacgggagcgaggacctcttc 205480 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 910,254 Number of Sequences: 3902068 Number of extensions: 910254 Number of successful extensions: 61719 Number of sequences better than 10.0: 136 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 57187 Number of HSP's gapped (non-prelim): 4522 length of query: 201 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 179 effective length of database: 17,147,199,772 effective search space: 3069348759188 effective search space used: 3069348759188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
