>YIY4_SCHPO (Q9UUI8) Protein C22F8.04 in chromosome I|
          Length = 383

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 31/111 (27%), Positives = 52/111 (46%)
 Frame = +3

Query: 255 ALGLSVTSSVATVICNKYLMSTLKFYFATTLTSWHLLVTFCTLHIAQRLRFFEAKPIDAQ 434
           A+ +++ +  A  I N  L+  L F  A T     +   F ++H  Q LR   A  +   
Sbjct: 100 AILVTILNKQALNIINAPLLM-LSFQMAFTSLMVKMYWRFSSVHF-QTLRLASAIQLK-- 155

Query: 435 TVISFGFLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIFLSRSS 587
               F F+  + I     CL F  V FYQ+++  ++PFT+LL  + L + +
Sbjct: 156 ---KFIFVKILGIVSKTYCLAFVPVSFYQISRGLLLPFTILLSFVLLKQKT 203

>FUCT1_CAEEL (Q968A5) GDP-fucose transporter|
          Length = 363

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
 Frame = +3

Query: 279 SVATVICNKYLMSTLKFYFATTLTSWHLLVT-FCTLHI-----AQRLRFFEAKPIDA--- 431
           S+  V  NKYL+S+++      +T +  LVT F  L +     A  L  F + PIDA   
Sbjct: 41  SIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAYGLFKFPSMPIDAKIS 100

Query: 432 QTVISFGFLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIFLSRSSA 590
           + V+    +    I   NLCL +  V FY + +     F ++   + L + ++
Sbjct: 101 REVLPLSVVFVAMISFNNLCLKYVGVSFYYVGRSLTTVFNVVCTYLILGQKTS 153

>S35C2_MOUSE (Q8VCX2) Solute carrier family 35 member C2 (Ovarian cancer|
           overexpressed gene 1 protein)
          Length = 364

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
 Frame = +3

Query: 279 SVATVICNKYLMSTLKFYFATTLTSWHLLVTFCTLHIAQRLRFFEAKPIDAQTVISF--- 449
           S+     NK+L  T  F+F   +T  HL V F    +++ L   +     A+ V+S+   
Sbjct: 28  SIGITFYNKWL--TKSFHFPLFMTMLHLAVIFLFSALSRAL--VQCSSHKARVVLSWTDY 83

Query: 450 -------GFLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIF 572
                       + +GL N    + +V  Y MTK + + F ++   IF
Sbjct: 84  LRRVAPTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLIF 131

>S35C2_HUMAN (Q9NQQ7) Solute carrier family 35 member C2 (Ovarian cancer|
           overexpressed gene 1 protein)
          Length = 365

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
 Frame = +3

Query: 279 SVATVICNKYLMSTLKFYFATTLTSWHLLVTFCTLHIAQRLRFFEAKPIDAQTVISFG-- 452
           S+     NK+L  T  F+F   +T  HL V F    +++ L   +     A+ V+S+   
Sbjct: 28  SIGITFYNKWL--TKSFHFPLFMTMLHLAVIFLFSALSRAL--VQCSSHRARVVLSWADY 83

Query: 453 --------FLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIF 572
                       + +GL N    + +V  Y MTK + + F ++   IF
Sbjct: 84  LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLIF 131

>FUCT1_HUMAN (Q96A29) GDP-fucose transporter 1 (Solute carrier family 35 member|
           C1)
          Length = 364

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 12/127 (9%)
 Frame = +3

Query: 246 VAGALGLSVTSSVATVICNKYLMSTLKFYFATTL--TSWHLLVTFCTLHIAQRLRF---- 407
           +A  + L   +S++ V  NKYL+ +      T +  T +  LVT         L      
Sbjct: 41  IALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPG 100

Query: 408 ---FEAKPIDAQTVISFGFLNGISIGLL---NLCLGFNSVGFYQMTKLAIIPFTMLLETI 569
              F +  +D +   S   L+ + IG++   NLCL +  V FY + +     F +LL  +
Sbjct: 101 AVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYL 160

Query: 570 FLSRSSA 590
            L ++++
Sbjct: 161 LLKQTTS 167

>RAD5_NEUCR (Q7S1P9) DNA repair protein rad-5 (EC 3.6.1.-)|
          Length = 1222

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = -2

Query: 482  EEANGDPV--EKPKGDDSLRVNWLRLEEAQTLRYVKRAEGDQQVPAC-QCRREVELKGAH 312
            E  N  P+  E+P  D ++   W    +   L Y+K      +VP C QCR  + ++   
Sbjct: 956  EAVNECPICAEEPMIDQAVTGCWHSACKKCLLDYIKHQTDRNEVPRCFQCREHINIRDIF 1015

Query: 311  EVLVADD 291
            EV+  DD
Sbjct: 1016 EVIRHDD 1022

>TMC2_HUMAN (Q8TDI7) Transmembrane cochlear-expressed protein 2|
          Length = 906

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/64 (31%), Positives = 33/64 (51%)
 Frame = +1

Query: 91  SPGAGSRGPAENVDRHRHERQLIEQEPRGDREKEVQKTKRRCRPTAGAPRWASPARWASL 270
           SPG+  R   +   R RH  +L EQE RG+ E+  +  ++R    +   R A+P R   +
Sbjct: 65  SPGSPRR---KQTGRRRHREELGEQE-RGEAERTCEGRRKRDERASFQERTAAPKREKEI 120

Query: 271 SRRQ 282
            R++
Sbjct: 121 PRKE 124

>YDB1_SCHPO (Q10354) Hypothetical protein C22E12.01 in chromosome I|
          Length = 374

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
 Frame = +3

Query: 279 SVATVICNKYLMSTLK--FYFATTLTSWHLLVT--FCTLHIAQRLRFFEAKPIDAQTVIS 446
           S+   + NK++ S  K  F F   L+S  +LV   F  L I    R+   K  +   +  
Sbjct: 64  SLLLSMMNKWIFSESKMDFQFPLFLSSCQMLVQMGFAKLTILAFPRYQPNKKDNFSWLEY 123

Query: 447 F------GFLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIF 572
           F        + G+ IGL N  L   ++ FY M + +I+ F      IF
Sbjct: 124 FYRAGICALVTGLDIGLSNASLETITLSFYTMCRSSILIFVFFFSVIF 171

>O51F1_HUMAN (Q8NH61) Olfactory receptor 51F2|
          Length = 330

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
 Frame = +3

Query: 291 VICNKYLMSTLKFYFATTLTSWHLLVTFCTLHIAQRLRFFEAKPIDAQTVIS-FGFLNGI 467
           V+C + L   + +YF + L++  L ++ CTL     + +FEA+ I+    I+   FL+G 
Sbjct: 51  VLCERSLHKPM-YYFLSMLSATDLSLSLCTLSTTLGVFWFEAREINLNACIAQMFFLHGF 109

Query: 468 S 470
           +
Sbjct: 110 T 110

>HSK1_SCHPO (P50582) Cell cycle serine/threonine-protein kinase hsk1 (EC|
           2.7.11.1) (Minichromosome maintenance protein kinase)
           (Cdc7-related kinase)
          Length = 507

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
 Frame = -2

Query: 383 KRAEGDQQVPACQCRREVELKGAHEVLVADDS--GY*RRD----REAQRAGDAHLGAPAV 222
           +R +G QQ  +C+C      + AH+  +A ++  GY + D    + A RAG     AP V
Sbjct: 240 ERYDGRQQSHSCRCTNSNAAELAHDFSIAQETSLGYIKNDTRPSKRANRAGTRGFRAPEV 299

>NSD1_HUMAN (Q96L73) Histone-lysine N-methyltransferase, H3 lysine-36 and H4|
            lysine-20 specific (EC 2.1.1.43) (H3-K36-HMTase)
            (H4-K20-HMTase) (Nuclear receptor binding SET domain
            containing protein 1) (NR-binding SET domain containing
            protein) (Androgen r
          Length = 2696

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = -3

Query: 514  KPTELKPRQRLRRPMEIPLRNPKEMTVCASIGFASKKRRRCAM*SVQKVTSKCQLVSVVA 335
            +P     ++RLR+P +  L   +E        FA KK+++     V KV+S+C+  S++A
Sbjct: 1264 EPAVRSEKKRLRKPSKWLLEYTEEYDQI----FAPKKKQKKVQEQVHKVSSRCEEESLLA 1319

Query: 334  K 332
            +
Sbjct: 1320 R 1320

>ZN142_HUMAN (P52746) Zinc finger protein 142 (HA4654)|
          Length = 1687

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -3

Query: 508  TELKPRQRLRRPMEIPLRNPKEMTVCASIGFASKKRR 398
            T L+  Q+ R P   P R P+    C   GF  K+ R
Sbjct: 1148 TALRLHQKRRHPTAAPARGPRPHLQCGDCGFTCKQSR 1184

>GSPG_AERHY (P31733) General secretion pathway protein G precursor|
          Length = 143

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +3

Query: 24  LLSRPTSAPNPRSENLSGSVARLP 95
           L+++PT+AP PRS    G + RLP
Sbjct: 75  LVNKPTAAPEPRSYRDGGYIKRLP 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,541,695
Number of Sequences: 219361
Number of extensions: 994321
Number of successful extensions: 3639
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3630
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)