ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart23a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_473283.1| Oryza sativa (japonica cultivar-group), predic... 109 1e-20
2ref|XM_473289.1| Oryza sativa (japonica cultivar-group), predic... 107 4e-20
3emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4,... 107 4e-20
4emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 107 4e-20
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
6ref|XM_473287.1| Oryza sativa (japonica cultivar-group), predic... 103 7e-19
7dbj|AK109281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 7e-19
8ref|XM_473284.1| Oryza sativa (japonica cultivar-group), predic... 101 3e-18
9dbj|AK071069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 3e-18
10gb|AY109840.1| Zea mays CL5708_1 mRNA sequence 90 1e-14
11gb|BT016438.1| Zea mays clone Contig271 mRNA sequence 74 6e-10
12gb|AY107601.1| Zea mays PCO136665 mRNA sequence 68 4e-08
13emb|AL138762.20| Human DNA sequence from clone RP11-179B2 on chr... 42 2.1
14gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, com... 42 2.1
15gb|AC105104.7| Homo sapiens chromosome 18, clone RP11-909J22, co... 42 2.1
16emb|AJ538832.1|NTA538832 Nicotiana tabacum cDNA-AFLP-fragment BT... 42 2.1
17ref|XM_471642.1| Oryza sativa (japonica cultivar-group), predic... 40 8.3
18gb|BC016250.1| Mus musculus CDC42 effector protein (Rho GTPase b... 40 8.3
19gb|BC083130.1| Mus musculus CDC42 effector protein (Rho GTPase b... 40 8.3
20gb|AY728217.1| Eurycea bislineata mitochondrion, complete genome 40 8.3
21ref|NM_027219.1| Mus musculus CDC42 effector protein (Rho GTPase... 40 8.3
22ref|XM_754645.1| Ustilago maydis 521 hypothetical protein (UM035... 40 8.3
23gb|AY300162.1| Mentha x piperita (-)-isopiperitenone reductase m... 40 8.3
24gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 40 8.3
25gb|AC016383.11| Homo sapiens chromosome 18, clone RP11-25O3, com... 40 8.3
26gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.3
27dbj|AB228191.1| Aspergillus oryzae cDNA, contig sequence: AoEST5064 40 8.3
28dbj|AP007158.1| Aspergillus oryzae RIB40 genomic DNA, 47Q_0172 40 8.3
29dbj|AK007896.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 8.3
30dbj|AK111082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
31gb|AY288138.1| Mentha x piperita menthol dehydrogenase mRNA, com... 40 8.3
32dbj|AP002436.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.3
33dbj|AK115254.1| Ciona intestinalis cDNA, clone:cieg041j20, full ... 40 8.3
34emb|AL592169.14| Mouse DNA sequence from clone RP23-305P10 on ch... 40 8.3

>ref|XM_473283.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 930

 Score =  109 bits (55), Expect = 1e-20
 Identities = 97/111 (87%)
 Strand = Plus / Plus

                                                                       
Query: 187 aaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagct 246
           |||| |||||||||||||||| || | |||||||||||||||||||| ||||  ||||||
Sbjct: 33  aagggttgctgtggtcaccggcggcaacaaagggatcgggctggaggtgtgccggcagct 92

                                                              
Query: 247 ggccggtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
           |||||     ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 93  ggccgccgacggcatcacggttgttctgacagccagggacgagacgagggg 143



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 564 agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
           ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 398 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 441



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>ref|XM_473289.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 924

 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                       
Query: 192 ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
           |||||||||||||||| || | ||||| |||||||||||||| ||||  |||||||||||
Sbjct: 44  ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 103

                                                         
Query: 252 gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 104 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 149



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                       
Query: 374 tccagcatcgctcggctggcagatttcctcaagacccgtttcgggaagcttgacatcctg 433
           |||||| | |||||| |||| |||||| | ||||| ||||| || ||||| ||||| |||
Sbjct: 226 tccagcgttgctcggttggctgatttcttgaagactcgttttggcaagctagacatactg 285

                         
Query: 434 gtgaataatgccgc 447
           ||||||||||||||
Sbjct: 286 gtgaataatgccgc 299



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 564 agacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
           |||||||||| ||||||||| | ||| ||||||||||||||||
Sbjct: 404 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 446



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>emb|AL663006.3|OSJN00204 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039L24,
             complete sequence
          Length = 121056

 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                         
Query: 192   ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
             |||||||||||||||| || | ||||| |||||||||||||| ||||  |||||||||||
Sbjct: 30677 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 30736

                                                           
Query: 252   gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                  ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 30737 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 30782



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Minus

                                                                        
Query: 192  ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
            |||||||||||||||| || | |||||||||||| ||||||| ||||  ||||||||| |
Sbjct: 5148 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 5089

                                                          
Query: 252  gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                 ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5088 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 5043



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 159/197 (80%)
 Strand = Plus / Minus

                                                                         
Query: 188   aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 247
             ||||||||||| |||||||| |||| ||| |||||||||||||||| ||||  |||||||
Sbjct: 26284 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 26225

                                                                         
Query: 248   gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 307
             ||||| |  |||  ||| |||||| |||| |||||||||||| ||| |||  ||||||| 
Sbjct: 26224 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 26165

                                                                         
Query: 308   gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 367
             || ||| || || |  ||||||| | |||   |||||| ||||| ||| | ||  |||||
Sbjct: 26164 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 26105

                              
Query: 368   gatgcttccagcatcgc 384
             || ||||||||||||||
Sbjct: 26104 gacgcttccagcatcgc 26088



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 564   agacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
             |||||||||| ||||||||| | ||| ||||||||||||||||
Sbjct: 31311 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 31353



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 560   cgacagacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
             ||||||||||||||  ||||||||   |||||| |||||||||||||
Sbjct: 25598 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactacta 25552



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 564  agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
            ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 4534 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 4491



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>emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01,
              complete sequence
          Length = 140454

 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                          
Query: 192    ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
              |||||||||||||||| || | ||||| |||||||||||||| ||||  |||||||||||
Sbjct: 128005 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 128064

                                                            
Query: 252    gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                   ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 128065 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 128110



 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                         
Query: 192   ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
             |||||||||||||||| || | |||||||||||||||||||| ||||  |||||||||||
Sbjct: 94026 ttgctgtggtcaccggcggcaacaaagggatcgggctggaggtgtgccggcagctggccg 94085

                                                           
Query: 252   gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                  ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 94086 ccgacggcatcacggttgttctgacagccagggacgagacgagggg 94131



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Minus

                                                                          
Query: 192    ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
              |||||||||||||||| || | |||||||||||| ||||||| ||||  ||||||||| |
Sbjct: 102476 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 102417

                                                            
Query: 252    gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                   ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 102416 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 102371



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 159/197 (80%)
 Strand = Plus / Minus

                                                                          
Query: 188    aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 247
              ||||||||||| |||||||| |||| ||| |||||||||||||||| ||||  |||||||
Sbjct: 123612 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 123553

                                                                          
Query: 248    gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 307
              ||||| |  |||  ||| |||||| |||| |||||||||||| ||| |||  ||||||| 
Sbjct: 123552 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 123493

                                                                          
Query: 308    gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 367
              || ||| || || |  ||||||| | |||   |||||| ||||| ||| | ||  |||||
Sbjct: 123492 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 123433

                               
Query: 368    gatgcttccagcatcgc 384
              || ||||||||||||||
Sbjct: 123432 gacgcttccagcatcgc 123416



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 564    agacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
              |||||||||| ||||||||| | ||| ||||||||||||||||
Sbjct: 128639 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 128681



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 560    cgacagacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
              ||||||||||||||  ||||||||   |||||| |||||||||||||
Sbjct: 122926 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactacta 122880



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 564    agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
              ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 101862 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 101819



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 564   agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
             ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 94634 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 94677



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                            
Query: 192      ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
                |||||||||||||||| || | ||||| |||||||||||||| ||||  |||||||||||
Sbjct: 26591119 ttgctgtggtcaccggcggcaacaaagagatcgggctggaggtgtgccggcagctggccg 26591178

                                                              
Query: 252      gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                     ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 26591179 ccgacggcatcacggttgttctgacggccagggacgagacgagggg 26591224



 Score =  107 bits (54), Expect = 4e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                            
Query: 192      ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
                |||||||||||||||| || | |||||||||||||||||||| ||||  |||||||||||
Sbjct: 26557140 ttgctgtggtcaccggcggcaacaaagggatcgggctggaggtgtgccggcagctggccg 26557199

                                                              
Query: 252      gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                     ||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 26557200 ccgacggcatcacggttgttctgacagccagggacgagacgagggg 26557245



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 92/106 (86%)
 Strand = Plus / Minus

                                                                            
Query: 192      ttgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctggccg 251
                |||||||||||||||| || | |||||||||||| ||||||| ||||  ||||||||| |
Sbjct: 26565590 ttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagctggctg 26565531

                                                              
Query: 252      gtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
                     ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 26565530 ccgacggcatcacggtggttctgacggccagggacgagacgagggg 26565485



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 159/197 (80%)
 Strand = Plus / Minus

                                                                            
Query: 188      aggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagctg 247
                ||||||||||| |||||||| |||| ||| |||||||||||||||| ||||  |||||||
Sbjct: 26586726 aggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggcagctg 26586667

                                                                            
Query: 248      gccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggcggct 307
                ||||| |  |||  ||| |||||| |||| |||||||||||| ||| |||  ||||||| 
Sbjct: 26586666 gccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggcggcc 26586607

                                                                            
Query: 308      gtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacatcacg 367
                || ||| || || |  ||||||| | |||   |||||| ||||| ||| | ||  |||||
Sbjct: 26586606 gtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgtcacg 26586547

                                 
Query: 368      gatgcttccagcatcgc 384
                || ||||||||||||||
Sbjct: 26586546 gacgcttccagcatcgc 26586530



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 564      agacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
                |||||||||| ||||||||| | ||| ||||||||||||||||
Sbjct: 26591753 agacgtacgacactgcaaagaacggcgtgcagacgaactacta 26591795



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 560      cgacagacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
                ||||||||||||||  ||||||||   |||||| |||||||||||||
Sbjct: 26586040 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactacta 26585994



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                            
Query: 564      agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
                ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 26564976 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 26564933



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 564      agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
                ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 26557748 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 26557791



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>ref|XM_473287.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 930

 Score =  103 bits (52), Expect = 7e-19
 Identities = 211/264 (79%)
 Strand = Plus / Plus

                                                                       
Query: 184 cacaaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagca 243
           ||||||||||||||| |||||||| |||| ||| |||||||||||||||| ||||  |||
Sbjct: 30  cacaaggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggca 89

                                                                       
Query: 244 gctggccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggc 303
           ||||||||| |  |||  ||| |||||| |||| |||||||||||| ||| |||  ||||
Sbjct: 90  gctggccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggc 149

                                                                       
Query: 304 ggctgtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacat 363
           ||| || ||| || || |  ||||||| | |||   |||||| ||||| ||| | ||  |
Sbjct: 150 ggccgtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgt 209

                                                                       
Query: 364 cacggatgcttccagcatcgctcggctggcagatttcctcaagacccgtttcgggaagct 423
           |||||| ||||||||||||||  |  | || || ||| |  || |||| || |||| |||
Sbjct: 210 cacggacgcttccagcatcgccagattagccgaattcttggagtcccgctttgggaggct 269

                                   
Query: 424 tgacatcctggtgaataatgccgc 447
            |||||||||||||||||||||||
Sbjct: 270 ggacatcctggtgaataatgccgc 293



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 560 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
           ||||||||||||||  ||||||||   |||||| |||||||||||||
Sbjct: 406 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactacta 452



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>dbj|AK109281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B09, full
           insert sequence
          Length = 1245

 Score =  103 bits (52), Expect = 7e-19
 Identities = 211/264 (79%)
 Strand = Plus / Plus

                                                                       
Query: 184 cacaaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagca 243
           ||||||||||||||| |||||||| |||| ||| |||||||||||||||| ||||  |||
Sbjct: 89  cacaaggattgctgtagtcaccggcgggaacaaggggatcgggctggaggtgtgccggca 148

                                                                       
Query: 244 gctggccggtagaggcatcacggtcgttctgacggccagggacgagacgaggggaacggc 303
           ||||||||| |  |||  ||| |||||| |||| |||||||||||| ||| |||  ||||
Sbjct: 149 gctggccggcaacggcgccaccgtcgttttgacagccagggacgaggcgaagggcgcggc 208

                                                                       
Query: 304 ggctgtggagcagatcaaacggctgggccactcggatgtcattttccatcagttagacat 363
           ||| || ||| || || |  ||||||| | |||   |||||| ||||| ||| | ||  |
Sbjct: 209 ggccgtcgagaagctccacgggctggggctctccagtgtcatcttccaccagctggatgt 268

                                                                       
Query: 364 cacggatgcttccagcatcgctcggctggcagatttcctcaagacccgtttcgggaagct 423
           |||||| ||||||||||||||  |  | || || ||| |  || |||| || |||| |||
Sbjct: 269 cacggacgcttccagcatcgccagattagccgaattcttggagtcccgctttgggaggct 328

                                   
Query: 424 tgacatcctggtgaataatgccgc 447
            |||||||||||||||||||||||
Sbjct: 329 ggacatcctggtgaataatgccgc 352



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 560 cgacagacgtacgaaactgcaaagcagggcctgcagacgaactacta 606
           ||||||||||||||  ||||||||   |||||| |||||||||||||
Sbjct: 465 cgacagacgtacgacgctgcaaaggccggcctgaagacgaactacta 511



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>ref|XM_473284.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 924

 Score =  101 bits (51), Expect = 3e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                       
Query: 187 aaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagct 246
           |||| |||||||||||||||| || | |||||||||||| ||||||| ||||  ||||||
Sbjct: 33  aagggttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagct 92

                                                              
Query: 247 ggccggtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
           ||| |     ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 93  ggctgccgacggcatcacggtggttctgacggccagggacgagacgagggg 143



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 383 gctcggctggcagatttcctcaagacccgtttcgggaagcttgacatcctggtgaataat 442
           |||||| |||| |||||| | ||||| ||||| || ||||| || || ||||||||||||
Sbjct: 229 gctcggttggctgatttcttgaagactcgttttggcaagctagatatactggtgaataat 288

             
Query: 443 gc 444
           ||
Sbjct: 289 gc 290



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 564 agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
           ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 398 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 441



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>dbj|AK071069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081M12, full
           insert sequence
          Length = 1304

 Score =  101 bits (51), Expect = 3e-18
 Identities = 96/111 (86%)
 Strand = Plus / Plus

                                                                       
Query: 187 aaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagct 246
           |||| |||||||||||||||| || | |||||||||||| ||||||| ||||  ||||||
Sbjct: 130 aagggttgctgtggtcaccggcggcaacaaagggatcggactggaggtgtgccggcagct 189

                                                              
Query: 247 ggccggtagaggcatcacggtcgttctgacggccagggacgagacgagggg 297
           ||| |     ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 190 ggctgccgacggcatcacggtggttctgacggccagggacgagacgagggg 240



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 383 gctcggctggcagatttcctcaagacccgtttcgggaagcttgacatcctggtgaataat 442
           |||||| |||| |||||| | ||||| ||||| || ||||| || || ||||||||||||
Sbjct: 326 gctcggttggctgatttcttgaagactcgttttggcaagctagatatactggtgaataat 385

             
Query: 443 gc 444
           ||
Sbjct: 386 gc 387



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 564 agacgtacgaaactgcaaagcagggcctgcagacgaactactac 607
           ||||||||||  | |||||| | ||| |||||||||||||||||
Sbjct: 495 agacgtacgacgccgcaaagaacggcgtgcagacgaactactac 538



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>gb|AY109840.1| Zea mays CL5708_1 mRNA sequence
          Length = 1284

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 90/105 (85%)
 Strand = Plus / Plus

                                                                       
Query: 186 caaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagc 245
           ||||| |||| || |||||||| |||| |||||||||||||||||||| ||||| |||||
Sbjct: 196 caagggttgccgttgtcaccggcgggaacaaagggatcgggctggaggtgtgcaggcagc 255

                                                        
Query: 246 tggccggtagaggcatcacggtcgttctgacggccagggacgaga 290
           ||||| | |  |||||||| ||||| ||||| ||||| |||||||
Sbjct: 256 tggccagcaacggcatcaccgtcgtcctgacagccagagacgaga 300



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 416 gggaagcttgacatcctggtgaataatgccgcta 449
           |||||||| ||||||||||| || ||||||||||
Sbjct: 426 gggaagctagacatcctggtaaacaatgccgcta 459



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>gb|BT016438.1| Zea mays clone Contig271 mRNA sequence
          Length = 1127

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 88/105 (83%)
 Strand = Plus / Plus

                                                                       
Query: 186 caaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagcagc 245
           ||||| |||| || |||||||| |||| |||||||||||||||||||| ||||| |||||
Sbjct: 1   caagggttgccgttgtcaccggcgggaacaaagggatcgggctggaggtgtgcaggcagc 60

                                                        
Query: 246 tggccggtagaggcatcacggtcgttctgacggccagggacgaga 290
           ||  | | |  |||||||| ||||| ||||| ||||| |||||||
Sbjct: 61  tgttcagcaacggcatcaccgtcgtcctgacagccagagacgaga 105



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 416 gggaagcttgacatcctggtgaataatgccgcta 449
           |||||||| ||||||||||| || ||||||||||
Sbjct: 231 gggaagctagacatcctggtaaacaatgccgcta 264



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>gb|AY107601.1| Zea mays PCO136665 mRNA sequence
          Length = 519

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                       
Query: 362 atcacggatgcttccagcatcgctcggctggcagatttcctcaagacccgtttcgggaag 421
           ||||||||||||||||||||||||||| ||||  | ||| | ||| |||| ||| |||||
Sbjct: 260 atcacggatgcttccagcatcgctcggttggccaacttcttgaaggcccgattcaggaag 319

                                     
Query: 422 cttgacatcctggtgaataatgccgc 447
            | || |||||||| |||||||||||
Sbjct: 320 ttggatatcctggtcaataatgccgc 345



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                       
Query: 184 cacaaggattgctgtggtcaccggtgggagcaaagggatcgggctggaggcgtgcaagca 243
           |||||| ||||| ||||||||||| | || || ||| |||||||| |||| ||||  |||
Sbjct: 82  cacaagaattgccgtggtcaccggcgcgaacagaggtatcgggctagaggtgtgccggca 141

                                      
Query: 244 gctggccggtagaggcatcacggtcgt 270
           |||||| || || ||| |||| |||||
Sbjct: 142 gctggctggcagtggcgtcaccgtcgt 168



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>emb|AL138762.20| Human DNA sequence from clone RP11-179B2 on chromosome 10, complete
             sequence
          Length = 113297

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 104   gatctgtggctgggagctcacactt 128
             |||||||||||||| ||||||||||
Sbjct: 61581 gatctgtggctgggggctcacactt 61557



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>gb|AC027510.7| Homo sapiens chromosome 18, clone RP11-118I2, complete sequence
          Length = 159205

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 428   atcctggtgaataatgccgct 448
             |||||||||||||||||||||
Sbjct: 71304 atcctggtgaataatgccgct 71284



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>gb|AC105104.7| Homo sapiens chromosome 18, clone RP11-909J22, complete sequence
          Length = 131296

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 428    atcctggtgaataatgccgct 448
              |||||||||||||||||||||
Sbjct: 104878 atcctggtgaataatgccgct 104858



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>emb|AJ538832.1|NTA538832 Nicotiana tabacum cDNA-AFLP-fragment BT1-M44-017
          Length = 285

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 416 gggaagcttgacatcctggtgaataatgc 444
           ||||||||||||||||| || ||||||||
Sbjct: 31  gggaagcttgacatcctcgtaaataatgc 59



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>ref|XM_471642.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 612

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 200 gtcaccggtgggagcaaagggatcgggc 227
           ||||||||||| |||||||| |||||||
Sbjct: 61  gtcaccggtggcagcaaaggaatcgggc 88



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>gb|BC016250.1| Mus musculus CDC42 effector protein (Rho GTPase binding) 1, mRNA
            (cDNA clone MGC:28884 IMAGE:4910994), complete cds
          Length = 2548

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    acacccctgccagctcccgc 20
            ||||||||||||||||||||
Sbjct: 1413 acacccctgccagctcccgc 1394



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>gb|BC083130.1| Mus musculus CDC42 effector protein (Rho GTPase binding) 1, mRNA
            (cDNA clone MGC:103067 IMAGE:6441478), complete cds
          Length = 2547

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    acacccctgccagctcccgc 20
            ||||||||||||||||||||
Sbjct: 1418 acacccctgccagctcccgc 1399



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>gb|AY728217.1| Eurycea bislineata mitochondrion, complete genome
          Length = 17184

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   gatcgagcatgtcatcaacc 476
             ||||||||||||||||||||
Sbjct: 12151 gatcgagcatgtcatcaacc 12132



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>ref|NM_027219.1| Mus musculus CDC42 effector protein (Rho GTPase binding) 1
            (Cdc42ep1), mRNA
          Length = 2543

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    acacccctgccagctcccgc 20
            ||||||||||||||||||||
Sbjct: 1426 acacccctgccagctcccgc 1407



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>ref|XM_754645.1| Ustilago maydis 521 hypothetical protein (UM03591.1) partial mRNA
          Length = 999

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 423 ttgacatcctggtgaataatgccg 446
           ||||||||||||| ||||||||||
Sbjct: 476 ttgacatcctggtcaataatgccg 499



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>gb|AY300162.1| Mentha x piperita (-)-isopiperitenone reductase mRNA, complete cds
          Length = 945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 413 ttcgggaagcttgacatcctggtgaataatgc 444
           ||||| |||||||| || ||||||||||||||
Sbjct: 250 ttcggaaagcttgatattctggtgaataatgc 281



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>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 290    acgaggggaacggcggctgtggag 313
              ||||||||||||||||| ||||||
Sbjct: 226728 acgaggggaacggcggcagtggag 226751



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>gb|AC016383.11| Homo sapiens chromosome 18, clone RP11-25O3, complete sequence
          Length = 178624

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     ctccttccttctttcatcag 98
              ||||||||||||||||||||
Sbjct: 117199 ctccttccttctttcatcag 117218



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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 500     gatgaaacgttcaatggcatggatgcgg 527
               ||||||||||||| | ||||||||||||
Sbjct: 3924728 gatgaaacgttcattcgcatggatgcgg 3924755



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>dbj|AB228191.1| Aspergillus oryzae cDNA, contig sequence: AoEST5064
          Length = 941

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 gacatcctggtgaataatgc 444
           ||||||||||||||||||||
Sbjct: 328 gacatcctggtgaataatgc 347



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>dbj|AP007158.1| Aspergillus oryzae RIB40 genomic DNA, 47Q_0172
          Length = 18709

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   gacatcctggtgaataatgc 444
             ||||||||||||||||||||
Sbjct: 12350 gacatcctggtgaataatgc 12331



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>dbj|AK007896.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
            enriched library, clone:1810058K22 product:similar to
            SERUM CONSTITUENT PROTEIN [Homo sapiens], full insert
            sequence
          Length = 2543

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    acacccctgccagctcccgc 20
            ||||||||||||||||||||
Sbjct: 1426 acacccctgccagctcccgc 1407



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>dbj|AK111082.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-F05, full
           insert sequence
          Length = 531

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 200 gtcaccggtgggagcaaagggatcgggc 227
           ||||||||||| |||||||| |||||||
Sbjct: 106 gtcaccggtggcagcaaaggaatcgggc 133



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>gb|AY288138.1| Mentha x piperita menthol dehydrogenase mRNA, complete cds
          Length = 1096

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 413 ttcgggaagcttgacatcctggtgaataatgc 444
           ||||||| |||||| || ||||||||||||||
Sbjct: 318 ttcgggaggcttgatattctggtgaataatgc 349



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>dbj|AP002436.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-627G1, complete
              sequence
          Length = 173509

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                              
Query: 154    cttgatcatggaaggatccactcccacgatca 185
              |||||||||| ||||||||||||||| |||||
Sbjct: 112230 cttgatcatg-aaggatccactcccatgatca 112260



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>dbj|AK115254.1| Ciona intestinalis cDNA, clone:cieg041j20, full insert sequence
          Length = 2036

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 35  cacctgaccacctcggctgc 54
           ||||||||||||||||||||
Sbjct: 247 cacctgaccacctcggctgc 228



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>emb|AL592169.14| Mouse DNA sequence from clone RP23-305P10 on chromosome 15, complete
             sequence
          Length = 161985

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     acacccctgccagctcccgc 20
             ||||||||||||||||||||
Sbjct: 75201 acacccctgccagctcccgc 75220


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,078,122
Number of Sequences: 3902068
Number of extensions: 4078122
Number of successful extensions: 99747
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 99573
Number of HSP's gapped (non-prelim): 168
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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