>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic kidney|
            disease protein 1)
          Length = 4303

 Score = 32.3 bits (72), Expect = 0.86
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -1

Query: 304  MNHLIIAHVYSVMRVDPRGPPRVDVIPRLQALLPDPVGEETH 179
            M H+++ +V+        GPPR+  +   +AL PDP G   H
Sbjct: 3727 MAHVLLPYVHGNQSSPELGPPRLRQVRLQEALYPDPPGPRVH 3768

>IF2_DESPS (Q6AJY4) Translation initiation factor IF-2|
          Length = 939

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 302 ESPYHRPRIFRDARRPTRPSTSRCDPPPSGSPSRS 198
           E P  R    R  R+PTRP  +R   P + SP+RS
Sbjct: 240 ELPIQREEPSRPRRKPTRPPVNRSPRPSTPSPNRS 274

>GNDS_HUMAN (Q12967) Ral guanine nucleotide dissociation stimulator (RalGEF)|
           (RalGDS)
          Length = 914

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 13  RSVNPTAIPAPEPEPSPLSVP 75
           R+ +P   PAPEPEP+P   P
Sbjct: 281 RAPSPVPAPAPEPEPAPTPAP 301

>AEGP_RAT (Q63191) Apical endosomal glycoprotein precursor|
          Length = 1216

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 218 KAGDHIYSWRAAWVYAHHGIYVGDDKVIHFTRGRDQEVGTGTVIDFLLVSSGPNRSSTPC 397
           ++G H   W  AWV  HH +       + F   RD   GT   +D + V  GP  ++  C
Sbjct: 759 RSGTHGNRWHQAWVTLHHQLQPSTKYQLLFEGLRDGYHGT-MGLDDMAVRPGPCWAAKRC 817

Query: 398 LVCSSD 415
               SD
Sbjct: 818 SFEDSD 823

>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC|
            2.7.11.1)
          Length = 1734

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 287  RPRIFRDARRPTR-PSTSRCDPPPSGSPSRSCWR 189
            RP+ F +A  P + PS SR  P  S +PS  CW+
Sbjct: 1523 RPQAFEEATNPLQVPSLSRSGPT-SPTPSEGCWK 1555

>UN112_DROME (Q9VZI3) Unc-112-related protein (Fermitin-1)|
          Length = 708

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 179 MGLLSNRIGKESLKAGDHIYSWR 247
           +G+ +NRI +  L  GDHI +WR
Sbjct: 615 LGVANNRIMRMDLNTGDHIKTWR 637

>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)|
          Length = 1262

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 10/76 (13%)
 Frame = -1

Query: 391 CAAPIRARTHKKKINDRSCSDLLVPSSSKMNHLIIAHVYSVMRV------DPRGPPRVD- 233
           C+    AR HK K     CS LLV   S     + A V S           P+  P +D 
Sbjct: 630 CSLLRHARDHKSKGLVMQCSQLLVKPISADQMFVAAPVNSTAPATPAASSSPKPSPTLDN 689

Query: 232 ---VIPRLQALLPDPV 194
              VIP L  L PDPV
Sbjct: 690 ASSVIPAL-PLYPDPV 704

>HRSL5_HUMAN (Q96KN8) HRAS-like suppressor 5 (H-rev107-like protein 5)|
          Length = 279

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 203 GKESLKAGDHIYSWRAAWVYAHHGIYVGDDKVIHFTRGRDQ-EVGTGTVI 349
           GK   + GD I  +R    Y H  IYV DD V+H     ++ EVG+ T I
Sbjct: 126 GKPRPRPGDLIEIFRIG--YEHWAIYVEDDCVVHLAPPSEEFEVGSITSI 173

>HEX_ADE07 (P36851) Hexon protein (Late protein 2)|
          Length = 937

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 11/87 (12%)
 Frame = +2

Query: 227 DHIYSWRAAWVYAHHGIYVGDDKVIHFT-----------RGRDQEVGTGTVIDFLLVSSG 373
           DH YS++  +  A     VGD++V+              RG   +  +GT  + L     
Sbjct: 75  DHTYSYKVRYTLA-----VGDNRVLDMASTFFDIRGVLDRGPSFKPYSGTAYNSLAPKGA 129

Query: 374 PNRSSTPCLVCSSDEVTAATETNGVTS 454
           PN S           VT  T T G+ S
Sbjct: 130 PNTSQWIVTAGEERAVTTTTNTFGIAS 156

>TAB1_MOUSE (Q8CF89) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 1 (TGF-beta-activated kinase
           1-binding protein 1) (TAK1-binding protein 1)
          Length = 502

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +1

Query: 25  PTAIPAPEPEPSPLSVPYCKAQGT 96
           PT  PAP     P+SVPY  AQ T
Sbjct: 375 PTPTPAPGGRVYPVSVPYSSAQST 398

>SYA_DESPS (Q6AQ16) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 882

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
 Frame = +2

Query: 182 GLLSNR-IGKESLKAGDHIYSWRAAW-VYAHHGIYVGDDKVIHFTRGR-----DQEVGTG 340
           GLLS +  G E L AG+    + AA   YA  G  +GD   + +  G+      Q  GTG
Sbjct: 477 GLLSEQGSGVEKLVAGEKGRVFVAATPFYAEAGGQMGDRGSVRWQGGQASVYATQAEGTG 536

Query: 341 TVIDFLLVSSGPNRSSTPCLVCSSDEVTAATETNGVTSSCLSCFL 475
            ++  LLV  G         +   DE   AT +N   +  L   L
Sbjct: 537 LILHDLLVEEGELSLGLEVTLQVDDEERKATASNHSATHLLQAAL 581

>LAMC1_MOUSE (P02468) Laminin gamma-1 chain precursor (Laminin B2 chain)|
          Length = 1607

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +2

Query: 359 LVSSGPNRSSTPCLVCSSDEVTAATETNGVTSSCLSCFLSGGALY 493
           L S+GP R   PC    + +  A    N +T  CL C  +    Y
Sbjct: 814 LGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFY 858

>ADD2_VIBPA (Q87GM3) Adenosine deaminase 2 (EC 3.5.4.4) (Adenosine|
           aminohydrolase 2)
          Length = 337

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 23/74 (31%), Positives = 31/74 (41%)
 Frame = +2

Query: 254 WVYAHHGIYVGDDKVIHFTRGRDQEVGTGTVIDFLLVSSGPNRSSTPCLVCSSDEVTAAT 433
           W Y  H      D VIH     D +  T   IDF  V +G +R+           +T   
Sbjct: 79  WEYLEH---CKADNVIHTEIFFDPQTHTERGIDFDTVLNGISRA-----------LTDGR 124

Query: 434 ETNGVTSSCLSCFL 475
           E  G+TS  ++CFL
Sbjct: 125 EKLGITSQIIACFL 138


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,980,522
Number of Sequences: 219361
Number of extensions: 1407498
Number of successful extensions: 8765
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8449
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)