ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart22h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072962.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
2dbj|AK059585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
3gb|AY111974.1| Zea mays CL5031_1 mRNA sequence 204 2e-49
4gb|BT017572.1| Zea mays clone EL01N0426H04.c mRNA sequence 190 3e-45
5gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome... 147 4e-32
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
7dbj|AK102786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 4e-32
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
9dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.030
10gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, comp... 46 0.12
11gb|AC165358.3| Mus musculus BAC clone RP23-122F14 from chromosom... 44 0.47
12gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, comple... 44 0.47
13gb|AF487711.1| Mus musculus transcriptional repressor E2F6 (E2f6... 44 0.47
14dbj|AK040490.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 44 0.47
15gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosom... 44 0.47
16gb|AC101911.9| Mus musculus chromosome 19, clone RP24-374E20, co... 44 0.47
17gb|AY104206.1| Zea mays PCO118554 mRNA sequence 44 0.47
18gb|AC131085.16| Mus musculus chromosome 13, clone RP23-452D10, c... 42 1.8
19gb|AC118682.8| Mus musculus chromosome 1, clone RP23-448B17, com... 42 1.8
20gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.8
21gb|AF127019.7| Homo sapiens chromosome 8 clone GS1-188e4 map p23... 42 1.8
22gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 42 1.8
23ref|XM_571081.1| Cryptococcus neoformans var. neoformans JEC21 h... 42 1.8
24gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome... 42 1.8
25gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome... 42 1.8
26gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, comple... 42 1.8
27gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete... 42 1.8
28gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, com... 42 1.8
29gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome... 42 1.8
30emb|AL355535.14| Human DNA sequence from clone RP11-494N1 on chr... 42 1.8
31emb|AL353622.33| Human DNA sequence from clone RP5-1092A3 on chr... 42 1.8
32gb|AC118467.37| Mus musculus strain C57BL/6J clone rp23-430i3, c... 42 1.8
33gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, com... 42 1.8
34gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosom... 42 1.8
35gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Can... 42 1.8
36gb|AC158773.6| Mus musculus chromosome 1, clone RP23-324F10, com... 42 1.8
37gb|AC116693.23| Mus musculus chromosome 8, clone RP24-372D19, co... 42 1.8
38gb|AC113147.3| Homo sapiens chromosome 8, clone RP11-357H1, comp... 42 1.8
39gb|AC023306.8| Homo sapiens chromosome 8, clone RP11-199C5, comp... 42 1.8
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
41gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Ca... 42 1.8
42gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, c... 42 1.8
43gb|AF263282.1|AF263282 Filobasidiella neoformans var. neoformans... 42 1.8
44dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
45emb|BX813325.2| Mouse DNA sequence from clone RP23-319D11 on chr... 42 1.8
46gb|AY922992.1| Pseudomonas syringae pv. phaseolicola 1448A HopAY... 42 1.8
47gb|AC140327.3| Mus musculus BAC clone RP24-325P20 from 6, comple... 42 1.8
48gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complet... 42 1.8
49gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Can... 42 1.8
50gb|AC153808.1| Homo sapiens chromosome 10 clone fa0674, complete... 40 7.3
51gb|AF101045.1| Oryza sativa (japonica cultivar-group) putative A... 40 7.3
52gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putati... 40 7.3
53gb|AC136976.5| Mus musculus BAC clone RP23-362K12 from chromosom... 40 7.3
54gb|AC137680.10| Mus musculus chromosome 13, clone RP23-454P19, c... 40 7.3
55gb|AY596539.1| Saccharum officinarum clone SCCCLR2C03C11, comple... 40 7.3
56gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome... 40 7.3
57gb|AC125361.4| Mus musculus BAC clone RP23-93M7 from chromosome ... 40 7.3
58gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosom... 40 7.3
59gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosom... 40 7.3
60gb|AC127304.4| Mus musculus BAC clone RP23-285C13 from chromosom... 40 7.3
61gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, c... 40 7.3
62emb|AL772134.16| Human DNA sequence from clone XXyac-24GB5 on ch... 40 7.3
63emb|AL445235.30| Human DNA sequence from clone RP1-65J11 on chro... 40 7.3
64emb|AL049851.1|HS889J22B Human DNA sequence from clone RP5-889J2... 40 7.3
65gb|AC161579.4| Mus musculus chromosome 19, clone RP23-298M4, com... 40 7.3
66gb|AC020634.16| Homo sapiens 3 BAC RP11-9N20 (Roswell Park Cance... 40 7.3
67emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chro... 40 7.3
68gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Canc... 40 7.3
69gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence 40 7.3
70gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 ... 40 7.3
71gb|AC005818.6| Mus musculus strain 129S6/SvEvTac chromosome 10 c... 40 7.3
72gb|AC154618.2| Mus musculus BAC clone RP23-321M11 from chromosom... 40 7.3
73gb|AY532063.1| Anemonia viridis copper/zinc superoxide dismutase... 40 7.3
74dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
75gb|AC007491.7| Homo sapiens chromosome 16 clone RP11-182C10, com... 40 7.3
76gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, com... 40 7.3
77gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, compl... 40 7.3
78gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, comple... 40 7.3
79dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 7.3
80gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, com... 40 7.3
81dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
82dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
83gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, com... 40 7.3
84gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 m... 40 7.3
85dbj|AK105121.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
86dbj|AK072174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
87dbj|AK069077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
88dbj|AK060048.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
89gb|AY107439.1| Zea mays PCO108773 mRNA sequence 40 7.3
90gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, co... 40 7.3
91emb|AL929286.13| Zebrafish DNA sequence from clone CH211-117K10 ... 40 7.3
92gb|AC108437.14| Mus musculus chromosome 13, clone RP23-207N7, co... 40 7.3
93emb|AL049548.6|HSDJ398G3 Human DNA sequence from clone RP3-398G3... 40 7.3
94emb|AL929348.9| Mouse DNA sequence from clone RP24-357K4 on chro... 40 7.3
95gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complet... 40 7.3
96emb|CT009697.13| Mouse DNA sequence from clone RP23-131H5 on chr... 40 7.3
97emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on ch... 40 7.3
98emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chr... 40 7.3
99emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on ch... 40 7.3
100emb|Y00055.1|CFRNLSU Crithidia fasciculata ribosomal DNA repeat ... 40 7.3 
>dbj|AK072962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149P14, full
           insert sequence
          Length = 1352

 Score =  252 bits (127), Expect = 1e-63
 Identities = 163/175 (93%)
 Strand = Plus / Plus

                                                                       
Query: 177 ccatgggtctcctctccaacaggatcgggaaggagagcctgaaggcgggggatcacatct 236
           ||||||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 76  ccatgggcctcctctcgaacaggattgggaaggagaccctgaaggcgggggatcacatct 135

                                                                       
Query: 237 actcgtggagggccgcgtgggtctacgcgcatcacggaatatacgtgggcgatgataagg 296
           | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 136 attcgtggagggccgcgtgggtctacgcgcatcacggaatatatgtgggcgatgataagg 195

                                                                  
Query: 297 tgattcattttactcgaggaagggaccaagaggtcggaacaggaacggtcattga 351
           |||| ||||||||| ||||||||| ||| |||||||||||||||||  |||||||
Sbjct: 196 tgatccattttactagaggaaggggccaggaggtcggaacaggaactttcattga 250



 Score =  147 bits (74), Expect = 4e-32
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                       
Query: 431 acggagacaaatggtgtgacttcctcttgcctcagctgtttcctgtcagggggtgctctc 490
           ||||||||||||||||||   ||||||||||||| ||| |||||||||||||| || |||
Sbjct: 327 acggagacaaatggtgtggtatcctcttgcctcaactgcttcctgtcagggggcgccctc 386

                                                         
Query: 491 taccgtttcgagtatgatgtcaacccagcacttttccttgccaaag 536
           |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 387 taccgtttcgagtatgctgtcaacccagcacttttccttgccaaag 432
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>dbj|AK059585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B09, full
           insert sequence
          Length = 1209

 Score =  252 bits (127), Expect = 1e-63
 Identities = 163/175 (93%)
 Strand = Plus / Plus

                                                                       
Query: 177 ccatgggtctcctctccaacaggatcgggaaggagagcctgaaggcgggggatcacatct 236
           ||||||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 147 ccatgggcctcctctcgaacaggattgggaaggagaccctgaaggcgggggatcacatct 206

                                                                       
Query: 237 actcgtggagggccgcgtgggtctacgcgcatcacggaatatacgtgggcgatgataagg 296
           | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 207 attcgtggagggccgcgtgggtctacgcgcatcacggaatatatgtgggcgatgataagg 266

                                                                  
Query: 297 tgattcattttactcgaggaagggaccaagaggtcggaacaggaacggtcattga 351
           |||| ||||||||| ||||||||| ||| |||||||||||||||||  |||||||
Sbjct: 267 tgatccattttactagaggaaggggccaggaggtcggaacaggaactttcattga 321



 Score =  147 bits (74), Expect = 4e-32
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                       
Query: 431 acggagacaaatggtgtgacttcctcttgcctcagctgtttcctgtcagggggtgctctc 490
           ||||||||||||||||||   ||||||||||||| ||| |||||||||||||| || |||
Sbjct: 398 acggagacaaatggtgtggtatcctcttgcctcaactgcttcctgtcagggggcgccctc 457

                                                         
Query: 491 taccgtttcgagtatgatgtcaacccagcacttttccttgccaaag 536
           |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 458 taccgtttcgagtatgctgtcaacccagcacttttccttgccaaag 503
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>gb|AY111974.1| Zea mays CL5031_1 mRNA sequence
          Length = 1143

 Score =  204 bits (103), Expect = 2e-49
 Identities = 175/199 (87%)
 Strand = Plus / Plus

                                                                       
Query: 171 ccgtctccatgggtctcctctccaacaggatcgggaaggagagcctgaaggcgggggatc 230
           |||||||||||||||||||||| |||||||| |||| ||||||||| ||||| | |||||
Sbjct: 61  ccgtctccatgggtctcctctcaaacaggattgggagggagagcctcaaggcagcggatc 120

                                                                       
Query: 231 acatctactcgtggagggccgcgtgggtctacgcgcatcacggaatatacgtgggcgatg 290
           | |||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 121 atatctactcctggagggcggcgtgggtctacgcgcatcacggaatatatgtgggcgatg 180

                                                                       
Query: 291 ataaggtgattcattttactcgaggaagggaccaagaggtcggaacaggaacggtcattg 350
           |||||||||| ||||| ||  |||||||    || ||||||||||||||||| ||| | |
Sbjct: 181 ataaggtgatccatttcacaggaggaagacgacaggaggtcggaacaggaactgtcgtcg 240

                              
Query: 351 attttcttcttgtgagttc 369
           || || |||||||||||||
Sbjct: 241 atattattcttgtgagttc 259



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 484 tgctctctaccgtttcgagtatgatgtcaacccagcacttttccttgccaaag 536
           ||||||||||||||||||||| |  |||||||| || || ||||| |||||||
Sbjct: 374 tgctctctaccgtttcgagtacgcagtcaacccggcgctcttcctcgccaaag 426
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>gb|BT017572.1| Zea mays clone EL01N0426H04.c mRNA sequence
          Length = 1092

 Score =  190 bits (96), Expect = 3e-45
 Identities = 156/176 (88%)
 Strand = Plus / Minus

                                                                        
Query: 194  aacaggatcgggaaggagagcctgaaggcgggggatcacatctactcgtggagggccgcg 253
            |||||||| |||| ||||||||| |||||||||||||| |||||||| |||||||| |||
Sbjct: 1071 aacaggattgggagggagagcctcaaggcgggggatcatatctactcctggagggcggcg 1012

                                                                        
Query: 254  tgggtctacgcgcatcacggaatatacgtgggcgatgataaggtgattcattttactcga 313
            |||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||  ||
Sbjct: 1011 tgggtctacgcgcatcacggaatatatgtgggcgatgataaggtgatccatttcacaaga 952

                                                                    
Query: 314  ggaagggaccaagaggtcggaacaggaacggtcattgattttcttcttgtgagttc 369
            ||||| |  || ||||||||||||||||| ||| | ||| || |||||||||||||
Sbjct: 951  ggaagaggacaggaggtcggaacaggaactgtcgtcgatattattcttgtgagttc 896



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 452 tcctcttgcctcagctgtttcctgtcagggggtgctctctaccgtttcgagtatgatgtc 511
           ||||| ||||||||||| |||||  | |||||||||||||||||||||||||| |  |||
Sbjct: 813 tcctcctgcctcagctgcttcctagctgggggtgctctctaccgtttcgagtacgcagtc 754

                                    
Query: 512 aacccagcacttttccttgccaaag 536
           ||||| || || ||||| |||||||
Sbjct: 753 aacccggcgctcttcctcgccaaag 729
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>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01,
            complete sequence
          Length = 160142

 Score =  147 bits (74), Expect = 4e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                        
Query: 431  acggagacaaatggtgtgacttcctcttgcctcagctgtttcctgtcagggggtgctctc 490
            ||||||||||||||||||   ||||||||||||| ||| |||||||||||||| || |||
Sbjct: 6328 acggagacaaatggtgtggtatcctcttgcctcaactgcttcctgtcagggggcgccctc 6269

                                                          
Query: 491  taccgtttcgagtatgatgtcaacccagcacttttccttgccaaag 536
            |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6268 taccgtttcgagtatgctgtcaacccagcacttttccttgccaaag 6223



 Score =  129 bits (65), Expect = 1e-26
 Identities = 74/77 (96%)
 Strand = Plus / Minus

                                                                        
Query: 197  aggatcgggaaggagagcctgaaggcgggggatcacatctactcgtggagggccgcgtgg 256
            ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 7649 aggattgggaaggagaccctgaaggcgggggatcacatctattcgtggagggccgcgtgg 7590

                             
Query: 257  gtctacgcgcatcacgg 273
            |||||||||||||||||
Sbjct: 7589 gtctacgcgcatcacgg 7573



 Score =  103 bits (52), Expect = 6e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                        
Query: 272  ggaatatacgtgggcgatgataaggtgattcattttactcgaggaagggaccaagaggtc 331
            |||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| ||||||
Sbjct: 6484 ggaatatatgtgggcgatgataaggtgatccattttactagaggaaggggccaggaggtc 6425

                                
Query: 332  ggaacaggaacggtcattga 351
            |||||||||||  |||||||
Sbjct: 6424 ggaacaggaactttcattga 6405
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  147 bits (74), Expect = 4e-32
 Identities = 98/106 (92%)
 Strand = Plus / Minus

                                                                            
Query: 431      acggagacaaatggtgtgacttcctcttgcctcagctgtttcctgtcagggggtgctctc 490
                ||||||||||||||||||   ||||||||||||| ||| |||||||||||||| || |||
Sbjct: 21413245 acggagacaaatggtgtggtatcctcttgcctcaactgcttcctgtcagggggcgccctc 21413186

                                                              
Query: 491      taccgtttcgagtatgatgtcaacccagcacttttccttgccaaag 536
                |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 21413185 taccgtttcgagtatgctgtcaacccagcacttttccttgccaaag 21413140



 Score =  129 bits (65), Expect = 1e-26
 Identities = 74/77 (96%)
 Strand = Plus / Minus

                                                                            
Query: 197      aggatcgggaaggagagcctgaaggcgggggatcacatctactcgtggagggccgcgtgg 256
                ||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 21414566 aggattgggaaggagaccctgaaggcgggggatcacatctattcgtggagggccgcgtgg 21414507

                                 
Query: 257      gtctacgcgcatcacgg 273
                |||||||||||||||||
Sbjct: 21414506 gtctacgcgcatcacgg 21414490



 Score =  103 bits (52), Expect = 6e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                            
Query: 272      ggaatatacgtgggcgatgataaggtgattcattttactcgaggaagggaccaagaggtc 331
                |||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| ||||||
Sbjct: 21413401 ggaatatatgtgggcgatgataaggtgatccattttactagaggaaggggccaggaggtc 21413342

                                    
Query: 332      ggaacaggaacggtcattga 351
                |||||||||||  |||||||
Sbjct: 21413341 ggaacaggaactttcattga 21413322
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>dbj|AK102786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107M16, full
            insert sequence
          Length = 2802

 Score =  147 bits (74), Expect = 4e-32
 Identities = 98/106 (92%)
 Strand = Plus / Plus

                                                                        
Query: 431  acggagacaaatggtgtgacttcctcttgcctcagctgtttcctgtcagggggtgctctc 490
            ||||||||||||||||||   ||||||||||||| ||| |||||||||||||| || |||
Sbjct: 1772 acggagacaaatggtgtggtatcctcttgcctcaactgcttcctgtcagggggcgccctc 1831

                                                          
Query: 491  taccgtttcgagtatgatgtcaacccagcacttttccttgccaaag 536
            |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1832 taccgtttcgagtatgctgtcaacccagcacttttccttgccaaag 1877



 Score =  103 bits (52), Expect = 6e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                        
Query: 272  ggaatatacgtgggcgatgataaggtgattcattttactcgaggaagggaccaagaggtc 331
            |||||||| |||||||||||||||||||| ||||||||| ||||||||| ||| ||||||
Sbjct: 1616 ggaatatatgtgggcgatgataaggtgatccattttactagaggaaggggccaggaggtc 1675

                                
Query: 332  ggaacaggaacggtcattga 351
            |||||||||||  |||||||
Sbjct: 1676 ggaacaggaactttcattga 1695
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 119     tccttctccccctccgccgcctgctcgccgtcctccgatc 158
               |||| |||||||||||||| || ||| |||||||||||||
Sbjct: 4432822 tcctcctccccctccgccgactactcaccgtcctccgatc 4432861



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 222      cgggggatcacatctactcgtggagggc 249
                ||||||||||||||||| | ||||||||
Sbjct: 20307545 cgggggatcacatctacacatggagggc 20307518
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>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:B1077E10
          Length = 100821

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 119  tccttctccccctccgccgcctgctcgccgtcctccgatc 158
            |||| |||||||||||||| || ||| |||||||||||||
Sbjct: 5310 tcctcctccccctccgccgactactcaccgtcctccgatc 5349
to top
>gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, complete sequence
          Length = 198570

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 503   tatgatgtcaacccagcacttttcctt 529
             ||||||||||||||||| |||||||||
Sbjct: 87357 tatgatgtcaacccagcccttttcctt 87331
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>gb|AC165358.3| Mus musculus BAC clone RP23-122F14 from chromosome 1, complete sequence
          Length = 223166

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 112    ctctccttccttctccccctcc 133
              ||||||||||||||||||||||
Sbjct: 206884 ctctccttccttctccccctcc 206863
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>gb|AC124519.2| Mus musculus BAC clone RP23-393I12 from 1, complete sequence
          Length = 195739

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 112    ctctccttccttctccccctcc 133
              ||||||||||||||||||||||
Sbjct: 167694 ctctccttccttctccccctcc 167715
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>gb|AF487711.1| Mus musculus transcriptional repressor E2F6 (E2f6) gene, complete
           cds, alternatively spliced
          Length = 22415

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 111 cctctccttccttctccccctc 132
           ||||||||||||||||||||||
Sbjct: 746 cctctccttccttctccccctc 725
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>dbj|AK040490.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A430103C09 product:unclassifiable, full
            insert sequence
          Length = 3452

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 112  ctctccttccttctccccctcc 133
            ||||||||||||||||||||||
Sbjct: 2330 ctctccttccttctccccctcc 2351
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>gb|AC157352.2| Mus musculus BAC clone RP24-483A21 from chromosome 12, complete
             sequence
          Length = 131417

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 111   cctctccttccttctccccctc 132
             ||||||||||||||||||||||
Sbjct: 55790 cctctccttccttctccccctc 55769
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>gb|AC101911.9| Mus musculus chromosome 19, clone RP24-374E20, complete sequence
          Length = 118431

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 111   cctctccttccttctccccctc 132
             ||||||||||||||||||||||
Sbjct: 76925 cctctccttccttctccccctc 76904
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>gb|AY104206.1| Zea mays PCO118554 mRNA sequence
          Length = 1181

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 218 aaggcgggggatcacatctactcgtggagggccgcgtgggtctacgcgcatcacggaata 277
           ||||| ||||||||||||||| | ||| ||||||| |   ||||||| || |||||||||
Sbjct: 389 aaggccggggatcacatctacacttggcgggccgcctacatctacgcccaccacggaata 448

             
Query: 278 ta 279
           ||
Sbjct: 449 ta 450
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>gb|AC131085.16| Mus musculus chromosome 13, clone RP23-452D10, complete sequence
          Length = 168579

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 109   cccctctccttccttctccccctcc 133
             |||||| ||||||||||||||||||
Sbjct: 70980 cccctcaccttccttctccccctcc 70956
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>gb|AC118682.8| Mus musculus chromosome 1, clone RP23-448B17, complete sequence
          Length = 195334

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              |||||||||||||| ||||||||||
Sbjct: 137192 cccctctccttcctcctccccctcc 137168



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tctccttccttctccccctc 132
              ||||||||||||||||||||
Sbjct: 189998 tctccttccttctccccctc 189979
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>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete
               sequence
          Length = 1507550

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 116     ccttccttctccccctccgcc 136
               |||||||||||||||||||||
Sbjct: 1187713 ccttccttctccccctccgcc 1187733
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>gb|AF127019.7| Homo sapiens chromosome 8 clone GS1-188e4 map p23.2, complete sequence
          Length = 182548

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    ccatactgcaaagcgcaaggg 93
             |||||||||||||||||||||
Sbjct: 52874 ccatactgcaaagcgcaaggg 52854
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 37      ccagcccctgaacctgaaccc 57
               |||||||||||||||||||||
Sbjct: 5379569 ccagcccctgaacctgaaccc 5379549
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>ref|XM_571081.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNE04270) partial mRNA
          Length = 2718

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 116  ccttccttctccccctccgcc 136
            |||||||||||||||||||||
Sbjct: 2615 ccttccttctccccctccgcc 2595
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>gb|AC125150.3| Mus musculus BAC clone RP24-354K9 from chromosome 19, complete sequence
          Length = 154390

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 109   cccctctccttccttctccccctcc 133
             ||||||||| |||||||||||||||
Sbjct: 45729 cccctctccctccttctccccctcc 45753
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>gb|AC124438.4| Mus musculus BAC clone RP24-260K9 from chromosome 7, complete sequence
          Length = 183326

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              |||||||||||||||||| ||||||
Sbjct: 100881 cccctctccttccttctctccctcc 100857
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>gb|AC123555.4| Mus musculus BAC clone RP23-139L20 from 1, complete sequence
          Length = 205623

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 109  cccctctccttccttctcccc 129
            |||||||||||||||||||||
Sbjct: 6269 cccctctccttccttctcccc 6249
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>gb|AC098713.4| Mus musculus BAC clone RP23-2C16 from 5, complete sequence
          Length = 217286

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   ctctccttccttctccccctc 132
             |||||||||||||||||||||
Sbjct: 37094 ctctccttccttctccccctc 37074
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>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence
          Length = 233499

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 109   cccctctccttccttctccccctcc 133
             |||||||||||||||||||| ||||
Sbjct: 70242 cccctctccttccttctccctctcc 70218
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>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence
          Length = 200353

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 109   cccctctccttccttctccccctcc 133
             ||||||||||| |||||||||||||
Sbjct: 90644 cccctctcctttcttctccccctcc 90620
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>emb|AL355535.14| Human DNA sequence from clone RP11-494N1 on chromosome 9 Contains the 5'
              end of the GNA14 gene for guanine nucleotide binding
              protein (G protein) alpha 14, the 3' end of the GNAQ gene
              for guanine nucleotide binding protein (G protein) q
              polypeptide and two CpG islands, complete sequence
          Length = 186658

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              |||||| ||||||||||||||||||
Sbjct: 125448 cccctccccttccttctccccctcc 125472
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>emb|AL353622.33| Human DNA sequence from clone RP5-1092A3 on chromosome 1 Contains the 5'
              end of the DNAJC8 gene for DnaJ (Hsp40) homolog subfamily C
              member 8, the ATPIF1 gene for ATPase inhibitory factor 1,
              the SESN2 gene for sestrin 2, the gene for a novel protein
              (FLJ20045) and a CpG island, complete sequence
          Length = 157243

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              ||||||||| |||||||||||||||
Sbjct: 101480 cccctctccctccttctccccctcc 101456
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>gb|AC118467.37| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 204699

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    ctctccttccttctccccctc 132
              |||||||||||||||||||||
Sbjct: 107070 ctctccttccttctccccctc 107090
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>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence
          Length = 176356

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              ||||||||| |||||||||||||||
Sbjct: 166851 cccctctccctccttctccccctcc 166827
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>gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosome 17, complete
             sequence
          Length = 213656

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 109   cccctctccttccttctccccctcc 133
             ||||||||||| |||||||||||||
Sbjct: 30491 cccctctcctttcttctccccctcc 30467
to top
>gb|AC153511.4| Mus musculus 10 BAC RP23-102N12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196715

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   ctctccttccttctccccctc 132
             |||||||||||||||||||||
Sbjct: 97798 ctctccttccttctccccctc 97778
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>gb|AC158773.6| Mus musculus chromosome 1, clone RP23-324F10, complete sequence
          Length = 230988

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              |||||||||||||| ||||||||||
Sbjct: 204757 cccctctccttcctcctccccctcc 204781



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    tctccttccttctccccctc 132
              ||||||||||||||||||||
Sbjct: 151951 tctccttccttctccccctc 151970
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>gb|AC116693.23| Mus musculus chromosome 8, clone RP24-372D19, complete sequence
          Length = 163719

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    tccgcccctctccttccttct 125
              |||||||||||||||||||||
Sbjct: 107608 tccgcccctctccttccttct 107628
to top
>gb|AC113147.3| Homo sapiens chromosome 8, clone RP11-357H1, complete sequence
          Length = 194518

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    ccatactgcaaagcgcaaggg 93
             |||||||||||||||||||||
Sbjct: 76453 ccatactgcaaagcgcaaggg 76473
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>gb|AC023306.8| Homo sapiens chromosome 8, clone RP11-199C5, complete sequence
          Length = 153197

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 73     ccatactgcaaagcgcaaggg 93
              |||||||||||||||||||||
Sbjct: 143516 ccatactgcaaagcgcaaggg 143536
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      cgcccctctccttccttctcc 127
                |||||||||||||||||||||
Sbjct: 11116892 cgcccctctccttccttctcc 11116872
to top
>gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 146128

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 109  cccctctccttccttctccccctcc 133
            ||||||||||||||||||| |||||
Sbjct: 8952 cccctctccttccttctcctcctcc 8928
to top
>gb|AC105969.17| Mus musculus chromosome 15, clone RP23-477B23, complete sequence
          Length = 189238

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              |||||||||||||||||||| ||||
Sbjct: 134771 cccctctccttccttctccctctcc 134795
to top
>gb|AF263282.1|AF263282 Filobasidiella neoformans var. neoformans clone CRYP01, complete
             sequence
          Length = 109900

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   ccttccttctccccctccgcc 136
             |||||||||||||||||||||
Sbjct: 57894 ccttccttctccccctccgcc 57874
to top
>dbj|AP004268.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0045F02
          Length = 143668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   cgcccctctccttccttctcc 127
             |||||||||||||||||||||
Sbjct: 99411 cgcccctctccttccttctcc 99391
to top
>emb|BX813325.2| Mouse DNA sequence from clone RP23-319D11 on chromosome X, complete
             sequence
          Length = 62720

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 113   tctccttccttctccccctcc 133
             |||||||||||||||||||||
Sbjct: 42736 tctccttccttctccccctcc 42756
to top
>gb|AY922992.1| Pseudomonas syringae pv. phaseolicola 1448A HopAY1 gene, partial cds
          Length = 4083

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 37   ccagcccctgaacctgaaccc 57
            |||||||||||||||||||||
Sbjct: 3502 ccagcccctgaacctgaaccc 3482
to top
>gb|AC140327.3| Mus musculus BAC clone RP24-325P20 from 6, complete sequence
          Length = 154692

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    cccctctccttccttctccccctcc 133
              |||||||||||||||||| ||||||
Sbjct: 121098 cccctctccttccttctctccctcc 121122
to top
>gb|AC148007.3| Mus musculus BAC clone RP23-273G4 from 1, complete sequence
          Length = 184937

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 109    cccctctccttccttctcccc 129
              |||||||||||||||||||||
Sbjct: 107030 cccctctccttccttctcccc 107050
to top
>gb|AC158638.15| Mus musculus 10 BAC RP24-117O6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 185145

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    ctctccttccttctccccctc 132
              |||||||||||||||||||||
Sbjct: 185014 ctctccttccttctccccctc 184994
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>gb|AC153808.1| Homo sapiens chromosome 10 clone fa0674, complete sequence
          Length = 34038

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ctccttccttctccccctcc 133
             ||||||||||||||||||||
Sbjct: 31586 ctccttccttctccccctcc 31567
to top
>gb|AF101045.1| Oryza sativa (japonica cultivar-group) putative ADP-glucose
            pyrophosphorylase subunit SH2 and putative transcription
            factor X1, putative transcription factor X2 and putative
            NADPH-dependent reductase A1 genes, complete cds
          Length = 29877

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  ccttctccccctccgccgcc 139
            ||||||||||||||||||||
Sbjct: 7575 ccttctccccctccgccgcc 7594
to top
>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose
            pyrophosphorylase subunit SH2 and putative
            NADPH-dependent reductase A1 genes, complete cds
          Length = 30034

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  ccttctccccctccgccgcc 139
            ||||||||||||||||||||
Sbjct: 7579 ccttctccccctccgccgcc 7598
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>gb|AC136976.5| Mus musculus BAC clone RP23-362K12 from chromosome 13, complete
             sequence
          Length = 147695

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   ccctctccttccttctccccctcc 133
             |||||||| |||||||||||||||
Sbjct: 13934 ccctctccctccttctccccctcc 13911
to top
>gb|AC137680.10| Mus musculus chromosome 13, clone RP23-454P19, complete sequence
          Length = 197663

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    ccctctccttccttctccccctcc 133
              |||||||| |||||||||||||||
Sbjct: 131227 ccctctccctccttctccccctcc 131204
to top
>gb|AY596539.1| Saccharum officinarum clone SCCCLR2C03C11, complete sequence
          Length = 1456

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 218 aaggcgggggatcacatctactcgtggagggccgcgtgggtctacgcgcatcacggaata 277
           ||||| ||||||||||||||| | ||| ||||||| |   ||||||| || ||||| |||
Sbjct: 327 aaggccggggatcacatctacacttggcgggccgcctacatctacgcccaccacgggata 386

               
Query: 278 tacg 281
           ||||
Sbjct: 387 tacg 390
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>gb|AC134537.3| Mus musculus BAC clone RP24-388M1 from chromosome 12, complete sequence
          Length = 221662

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   cccctctccttccttctccc 128
             ||||||||||||||||||||
Sbjct: 14938 cccctctccttccttctccc 14919
to top
>gb|AC125361.4| Mus musculus BAC clone RP23-93M7 from chromosome 12, complete sequence
          Length = 202234

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cccctctccttccttctccc 128
             ||||||||||||||||||||
Sbjct: 41040 cccctctccttccttctccc 41059
to top
>gb|AC125322.4| Mus musculus BAC clone RP23-407J24 from chromosome 7, complete sequence
          Length = 217912

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tctccttccttctccccctc 132
             ||||||||||||||||||||
Sbjct: 88771 tctccttccttctccccctc 88790
to top
>gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosome 14, complete
            sequence
          Length = 172035

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 107  cgcccctctccttccttctccccc 130
            ||||||||||| ||||||||||||
Sbjct: 5797 cgcccctctccctccttctccccc 5774
to top
>gb|AC127304.4| Mus musculus BAC clone RP23-285C13 from chromosome 3, complete sequence
          Length = 151365

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tctccttccttctccccctc 132
              ||||||||||||||||||||
Sbjct: 128007 tctccttccttctccccctc 127988
to top
>gb|AC134382.13| Mus musculus strain C57BL/6J clone rp23-167l1, complete sequence
          Length = 194086

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   cccctctccttccttctccc 128
             ||||||||||||||||||||
Sbjct: 33590 cccctctccttccttctccc 33609
to top
>emb|AL772134.16| Human DNA sequence from clone XXyac-24GB5 on chromosome 10, complete
            sequence
          Length = 12559

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 114  ctccttccttctccccctcc 133
            ||||||||||||||||||||
Sbjct: 1762 ctccttccttctccccctcc 1781
to top
>emb|AL445235.30| Human DNA sequence from clone RP1-65J11 on chromosome 1 Contains the 5'
              end of the PUM1 gene for pumilio homolog 1 (Drosophila),
              the SDC3 gene for syndecan 3 (N-syndecan), two novel genes
              and a CpG island, complete sequence
          Length = 167478

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 451    ttcctcttgcctcagctgtt 470
              ||||||||||||||||||||
Sbjct: 149791 ttcctcttgcctcagctgtt 149772
to top
>emb|AL049851.1|HS889J22B Human DNA sequence from clone RP5-889J22 on chromosome 22q13.1,
            complete sequence
          Length = 11048

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 109  cccctctccttccttctccccctc 132
            ||||||||| ||||||||||||||
Sbjct: 4950 cccctctccctccttctccccctc 4927
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>gb|AC161579.4| Mus musculus chromosome 19, clone RP23-298M4, complete sequence
          Length = 188366

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    tccgcccctctccttccttc 124
              ||||||||||||||||||||
Sbjct: 166524 tccgcccctctccttccttc 166543
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>gb|AC020634.16| Homo sapiens 3 BAC RP11-9N20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181174

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 180    tgggtctcctctccaacagg 199
              ||||||||||||||||||||
Sbjct: 150387 tgggtctcctctccaacagg 150368
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>emb|AL669896.7| Mouse DNA sequence from clone RP23-477F4 on chromosome 2, complete
              sequence
          Length = 163577

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    cccctctccttccttctccc 128
              ||||||||||||||||||||
Sbjct: 153313 cccctctccttccttctccc 153332
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>gb|AC112640.3| Homo sapiens 3 BAC RP11-817M15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 211335

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gcccctctccttccttctcc 127
              ||||||||||||||||||||
Sbjct: 105122 gcccctctccttccttctcc 105141
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>gb|AF449411.1| Myxococcus xanthus cosmid pREG3E1, complete sequence
          Length = 36615

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   cgccgcccccgtccgtctcc 178
             ||||||||||||||||||||
Sbjct: 33480 cgccgcccccgtccgtctcc 33461
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>gb|AC005302.70| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-481n4,
              complete sequence
          Length = 204653

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    cccctctccttccttctccc 128
              ||||||||||||||||||||
Sbjct: 165065 cccctctccttccttctccc 165046
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>gb|AC005818.6| Mus musculus strain 129S6/SvEvTac chromosome 10 clone rp21-411d9,
             complete sequence
          Length = 144723

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   cccctctccttccttctccc 128
             ||||||||||||||||||||
Sbjct: 16449 cccctctccttccttctccc 16430
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>gb|AC154618.2| Mus musculus BAC clone RP23-321M11 from chromosome 14, complete
             sequence
          Length = 209522

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 107   cgcccctctccttccttctccccc 130
             ||||||||||| ||||||||||||
Sbjct: 21315 cgcccctctccctccttctccccc 21338
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>gb|AY532063.1| Anemonia viridis copper/zinc superoxide dismutase (CuZnSODa) gene,
            complete cds
          Length = 5463

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  attgattttcttcttgtgag 366
            ||||||||||||||||||||
Sbjct: 3409 attgattttcttcttgtgag 3428
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 120      ccttctccccctccgccgcc 139
                ||||||||||||||||||||
Sbjct: 25359286 ccttctccccctccgccgcc 25359305
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>gb|AC007491.7| Homo sapiens chromosome 16 clone RP11-182C10, complete sequence
          Length = 180888

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 108    gcccctctccttccttctcc 127
              ||||||||||||||||||||
Sbjct: 102012 gcccctctccttccttctcc 102031
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>gb|AC113303.16| Mus musculus chromosome 5, clone RP23-431E5, complete sequence
          Length = 221109

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   ctccttccttctccccctcc 133
             ||||||||||||||||||||
Sbjct: 57361 ctccttccttctccccctcc 57342
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>gb|AC009973.10| Homo sapiens BAC clone RP11-457P23 from 2, complete sequence
          Length = 202383

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 108    gcccctctccttccttctcc 127
              ||||||||||||||||||||
Sbjct: 106913 gcccctctccttccttctcc 106894
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>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence
          Length = 220183

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 341    acggtcattgattttcttct 360
              ||||||||||||||||||||
Sbjct: 154002 acggtcattgattttcttct 154021
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 130     ctccgccgcctgctcgccgt 149
               ||||||||||||||||||||
Sbjct: 6079977 ctccgccgcctgctcgccgt 6079958
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>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    ctccttccttctccccctcc 133
              ||||||||||||||||||||
Sbjct: 147249 ctccttccttctccccctcc 147230
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>dbj|AP004317.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0663E10
          Length = 162297

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ccttctccccctccgccgcc 139
             ||||||||||||||||||||
Sbjct: 49286 ccttctccccctccgccgcc 49305
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 222   cgggggatcacatctactcgtggagggc 249
             ||||||||||||||||| | ||||||||
Sbjct: 86672 cgggggatcacatctacacatggagggc 86645
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>gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, complete sequence
          Length = 212018

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   ctctccttccttctccccct 131
             ||||||||||||||||||||
Sbjct: 13778 ctctccttccttctccccct 13759



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ctctccttccttctccccct 131
            ||||||||||||||||||||
Sbjct: 8762 ctctccttccttctccccct 8781
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>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ctccttccttctccccctcc 133
             ||||||||||||||||||||
Sbjct: 65387 ctccttccttctccccctcc 65406
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>dbj|AK105121.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-B12, full
           insert sequence
          Length = 1099

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 222 cgggggatcacatctactcgtggagggc 249
           ||||||||||||||||| | ||||||||
Sbjct: 126 cgggggatcacatctacacatggagggc 153
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>dbj|AK072174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135P13, full
           insert sequence
          Length = 3195

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 222 cgggggatcacatctactcgtggagggc 249
           ||||||||||||||||| | ||||||||
Sbjct: 127 cgggggatcacatctacacatggagggc 154
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>dbj|AK069077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007G13, full
           insert sequence
          Length = 2531

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 ccttctccccctccgccgcc 139
           ||||||||||||||||||||
Sbjct: 78  ccttctccccctccgccgcc 97
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>dbj|AK060048.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H07, full
           insert sequence
          Length = 1044

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 222 cgggggatcacatctactcgtggagggc 249
           ||||||||||||||||| | ||||||||
Sbjct: 122 cgggggatcacatctacacatggagggc 149
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>gb|AY107439.1| Zea mays PCO108773 mRNA sequence
          Length = 532

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 109 cccctctccttccttctccccctc 132
           |||||||||||||| |||||||||
Sbjct: 28  cccctctccttcctgctccccctc 5
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>gb|AC115771.13| Mus musculus chromosome 19, clone RP23-116D4, complete sequence
          Length = 209515

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   tccgcccctctccttccttc 124
             ||||||||||||||||||||
Sbjct: 38961 tccgcccctctccttccttc 38980
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>emb|AL929286.13| Zebrafish DNA sequence from clone CH211-117K10 in linkage group 11,
              complete sequence
          Length = 168222

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 114    ctccttccttctccccctcc 133
              ||||||||||||||||||||
Sbjct: 152058 ctccttccttctccccctcc 152077
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>gb|AC108437.14| Mus musculus chromosome 13, clone RP23-207N7, complete sequence
          Length = 194800

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    ccctctccttccttctcccc 129
              ||||||||||||||||||||
Sbjct: 189888 ccctctccttccttctcccc 189869
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>emb|AL049548.6|HSDJ398G3 Human DNA sequence from clone RP3-398G3 on chromosome 6q25.1-25.3
             Contains the 3' part of the gene for a novel protein
             containing CH domains (contains KIAA1756, FLJ30878 and the
             likely ortholog of rat CPG2), four novel genes and the 5'
             part of a novel gene, complete sequence
          Length = 86478

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   ggtcattgattttcttcttg 362
             ||||||||||||||||||||
Sbjct: 80342 ggtcattgattttcttcttg 80361
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>emb|AL929348.9| Mouse DNA sequence from clone RP24-357K4 on chromosome 2, complete
             sequence
          Length = 114911

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   cccctctccttccttctccc 128
             ||||||||||||||||||||
Sbjct: 24955 cccctctccttccttctccc 24936
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>gb|AC130723.4| Mus musculus BAC clone RP24-409P7 from 8, complete sequence
          Length = 197951

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   ctccttccttctccccctcc 133
             ||||||||||||||||||||
Sbjct: 72784 ctccttccttctccccctcc 72803
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>emb|CT009697.13| Mouse DNA sequence from clone RP23-131H5 on chromosome 13, complete
             sequence
          Length = 225802

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ccctctccttccttctcccc 129
             ||||||||||||||||||||
Sbjct: 50916 ccctctccttccttctcccc 50897
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>emb|AL626784.11| Mouse DNA sequence from clone RP23-392J14 on chromosome 4, complete
              sequence
          Length = 211585

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    ccctctccttccttctccccctcc 133
              ||||||||||||||||||| ||||
Sbjct: 114691 ccctctccttccttctccctctcc 114668
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>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete
             sequence
          Length = 222709

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   ccctctccttccttctcccc 129
             ||||||||||||||||||||
Sbjct: 58272 ccctctccttccttctcccc 58253
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>emb|AL671923.15| Mouse DNA sequence from clone RP23-322C16 on chromosome X, complete
              sequence
          Length = 213730

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    cccctctccttccttctccccctc 132
              |||||||||||||||| |||||||
Sbjct: 164271 cccctctccttccttccccccctc 164248
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>emb|Y00055.1|CFRNLSU Crithidia fasciculata ribosomal DNA repeat (complete)
          Length = 11315

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 108 gcccctctccttccttctccccctccgc 135
           |||||||||||||| ||||||| |||||
Sbjct: 89  gcccctctccttccctctccccatccgc 62


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,046,895
Number of Sequences: 3902068
Number of extensions: 5046895
Number of successful extensions: 106080
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105632
Number of HSP's gapped (non-prelim): 447
length of query: 538
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 515
effective length of database: 17,143,297,704
effective search space: 8828798317560
effective search space used: 8828798317560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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