>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4|
          Length = 489

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = +2

Query: 386 PSLPAGKRKSPGMLSWRRSRSQTPTHAQTPTPSRSR 493
           P++PA  R      S  RSRS++P+ + + +PSRSR
Sbjct: 447 PNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSR 482

>RB97D_DROME (Q02926) Ribonucleoprotein RB97D|
          Length = 471

 Score = 25.8 bits (55), Expect(2) = 2.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -3

Query: 365 GWSRTSPGPENAPRWWERPWWC 300
           GW+   P P  A +W    W C
Sbjct: 308 GWNAPPPPPPGAQQWHANQWGC 329



 Score = 23.1 bits (48), Expect(2) = 2.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 454 GLAPRPPPAQHPWALP 407
           G  P PPP Q+ W  P
Sbjct: 297 GWGPYPPPQQNGWNAP 312

>DNAE2_COREF (Q8FRX6) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1073

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = +1

Query: 310 GLSHHRGAFSGPGEVRDHPAFDVVPTELAR 399
           G   H G  SG   + D P  DVVPTE AR
Sbjct: 525 GQPRHLGIHSGGMVICDRPIADVVPTEWAR 554

>MCPA_CAUCR (Q00986) Chemoreceptor mcpA (Methyl-accepting chemotaxis protein)|
          Length = 657

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/30 (50%), Positives = 21/30 (70%)
 Frame = -3

Query: 194 TSAAASD*SSWVRRTALGGPWSSEVVSRTR 105
           T+AA  + ++ VRRTA G   +S+VVS TR
Sbjct: 386 TAAALDELTATVRRTAAGARQASDVVSTTR 415


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.135    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,285,460
Number of Sequences: 219361
Number of extensions: 770084
Number of successful extensions: 3257
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)