ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22h09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence Length = 183307 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 242 tcctccggctcccctcccaccgccgcccctgcc 274 |||||| |||||||||||||||| ||||||||| Sbjct: 148143 tcctccagctcccctcccaccgcagcccctgcc 148111
>ref|NM_188414.1| Oryza sativa (japonica cultivar-group), Ozsa8140 predicted mRNA Length = 2007 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctggccg 94 ||||||||||||||||||||||| Sbjct: 36 gctcctcctcttcctcctggccg 58
>gb|AC068662.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-251N15, complete sequence Length = 141783 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 ccgtgctcctcctcttcctcctg 90 ||||||||||||||||||||||| Sbjct: 140652 ccgtgctcctcctcttcctcctg 140674
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 68 ccgtgctcctcctcttcctcctg 90 ||||||||||||||||||||||| Sbjct: 12704 ccgtgctcctcctcttcctcctg 12726
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctggccg 94 ||||||||||||||||||||||| Sbjct: 6133274 gctcctcctcttcctcctggccg 6133296 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 ctcgccgtgctcctcctcttcctcct 89 |||||||||||||||||| ||||||| Sbjct: 8985417 ctcgccgtgctcctcctcctcctcct 8985442 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctcc 280 |||||||||||||||||||| Sbjct: 37006392 ccgccgcccctgccacctcc 37006373 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 |||||| ||| ||||||||||||||||| Sbjct: 1837613 ccctcgtcgtcctcctcctcttcctcct 1837640
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctggccg 94 ||||||||||||||||||||||| Sbjct: 157631 gctcctcctcttcctcctggccg 157653
>dbj|AK066468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066B01, full insert sequence Length = 2023 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctggccg 94 ||||||||||||||||||||||| Sbjct: 73 gctcctcctcttcctcctggccg 95
>ref|NM_187993.1| Oryza sativa (japonica cultivar-group), Ozsa8413 predicted mRNA Length = 303 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 ctcgccgtgctcctcctcttcctcct 89 |||||||||||||||||| ||||||| Sbjct: 40 ctcgccgtgctcctcctcctcctcct 65
>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete sequence Length = 169506 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctggc 92 |||||||||||||||||||||| Sbjct: 133326 tgctcctcctcttcctcctggc 133347
>ref|XM_845489.1| PREDICTED: Canis familiaris similar to Ephrin-A5 precursor (EPH-related receptor tyrosine kinase ligand 7) (LERK-7) (AL-1) (LOC608458), mRNA Length = 1002 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggccgt 95 |||||||||||||||||||||| Sbjct: 965 tcctcctcttcctcctggccgt 986
>emb|CR636440.2|CNS0EQ1Q Tetraodon nigroviridis full-length cDNA Length = 1186 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 388 gagcttgcccgcggggaagagg 409 |||||||||||||||||||||| Sbjct: 1108 gagcttgcccgcggggaagagg 1087
>gb|AF317062.1|AF317062 Prunus persica abscisic stress ripening-like protein mRNA, complete cds Length = 841 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gcaccaccacggcctctcccaccacc 325 ||||||||||||||||| |||||||| Sbjct: 75 gcaccaccacggcctcttccaccacc 100
>dbj|AP001383.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0453A06 Length = 154378 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 ctcgccgtgctcctcctcttcctcct 89 |||||||||||||||||| ||||||| Sbjct: 93172 ctcgccgtgctcctcctcctcctcct 93197
>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 ctcgccgtgctcctcctcttcctcct 89 |||||||||||||||||| ||||||| Sbjct: 14424 ctcgccgtgctcctcctcctcctcct 14449
>dbj|AK107988.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-F03, full insert sequence Length = 918 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 64 ctcgccgtgctcctcctcttcctcct 89 |||||||||||||||||| ||||||| Sbjct: 165 ctcgccgtgctcctcctcctcctcct 190
>gb|U93164.1|PAU93164 Prunus armeniaca abscisic stress ripening protein homolog mRNA, complete cds Length = 976 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 300 gcaccaccacggcctctcccaccacc 325 ||||||||||||||||| |||||||| Sbjct: 187 gcaccaccacggcctcttccaccacc 212
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 gccgtcgccgtggacgagggcg 241 |||||||||||||||||||||| Sbjct: 74858 gccgtcgccgtggacgagggcg 74837
>ref|XM_483195.1| Oryza sativa (japonica cultivar-group), mRNA Length = 432 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 302 accaccacggcctctcccaccaccg 326 |||||||||||||||||| |||||| Sbjct: 414 accaccacggcctctccccccaccg 390
>ref|XM_591677.2| PREDICTED: Bos taurus similar to intramembrane protease 5 (LOC513917), mRNA Length = 2073 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 ctcctcctcttcctcctggcc 93 ||||||||||||||||||||| Sbjct: 31 ctcctcctcttcctcctggcc 51
>ref|XM_653362.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0850.2), mRNA Length = 1866 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 1333 cgtgctcctcctcttcctcct 1313
>ref|XM_653240.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0728.2), mRNA Length = 2043 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 gtgctcctcctcttcctcctg 90 ||||||||||||||||||||| Sbjct: 603 gtgctcctcctcttcctcctg 583
>gb|AY356068.1| Canis familiaris isolate cOR56A24 olfactory receptor family 56 subfamily A-like gene, partial sequence Length = 670 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cctcctcttcctcctggccgt 95 ||||||||||||||||||||| Sbjct: 610 cctcctcttcctcctggccgt 590
>gb|AC124653.5| Homo sapiens chromosome 11, clone RP11-100H14, complete sequence Length = 151313 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gccgtgctcctcctcttcctcctgg 91 ||||||||||||||| ||||||||| Sbjct: 55141 gccgtgctcctcctcctcctcctgg 55165
>emb|X97667.1|GGCNKX23 G.gallus mRNA for cNKx-2.3 protein Length = 1517 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggccgtcg 97 ||||||||||||||||| ||||||| Sbjct: 353 ctcctcctcttcctcctcgccgtcg 329
>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog pseudogene, a tumor protein translationally-controlled 1 (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2) pseudogene and the Cd2 gene for CD2 antigen, complete sequence Length = 169010 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggcc 93 ||||||||||||||||||||| Sbjct: 31312 ctcctcctcttcctcctggcc 31292
>gb|AY113445.1| Drosophila melanogaster RE29777 full insert cDNA Length = 5386 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 1493 cgtgctcctcctcttcctcct 1473
>ref|NM_166242.1| Drosophila melanogaster CG10936-RB, transcript variant B (CG10936), mRNA Length = 5370 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 1492 cgtgctcctcctcttcctcct 1472
>ref|NM_137395.1| Drosophila melanogaster CG10936-RA, transcript variant A (CG10936), mRNA Length = 5373 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 1495 cgtgctcctcctcttcctcct 1475
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcgccgtgctcctcctcttcctcct 89 |||||||||||||||||||| |||| Sbjct: 5534450 tcgccgtgctcctcctcttcgtcct 5534474 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccacggcctctcccaccacc 325 |||||||||||||||||||| Sbjct: 3353692 ccacggcctctcccaccacc 3353673
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 accaccacggcctctcccaccaccg 326 |||||||||||||||||| |||||| Sbjct: 24750834 accaccacggcctctccccccaccg 24750858
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggccg 94 ||||||||||||||||||||| Sbjct: 32342588 tcctcctcttcctcctggccg 32342608 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cctcctcttcctcctggccgtcgc 98 ||||||||||||||| |||||||| Sbjct: 31695056 cctcctcttcctcctcgccgtcgc 31695079 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ccacctccaccgtcacctct 292 |||||||||||||||||||| Sbjct: 16353272 ccacctccaccgtcacctct 16353253
>gb|AC007697.5|AC007697 Drosophila melanogaster, chromosome 2R, region 54D4-54E7, BAC clone BACR12C23, complete sequence Length = 194897 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 57550 cgtgctcctcctcttcctcct 57570
>ref|NM_205031.1| Gallus gallus NK2 transcription factor related, locus 3 (NKX2-3), mRNA Length = 1517 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggccgtcg 97 ||||||||||||||||| ||||||| Sbjct: 353 ctcctcctcttcctcctcgccgtcg 329
>ref|XM_235545.3| PREDICTED: Rattus norvegicus similar to hypothetical protein BC012187 (predicted) (LOC300117), mRNA Length = 4611 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 67 gccgtgctcctcctcttcctc 87 ||||||||||||||||||||| Sbjct: 3560 gccgtgctcctcctcttcctc 3540
>gb|AC129501.3| Homo sapiens chromosome 11, clone RP11-1095K7, complete sequence Length = 179540 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gccgtgctcctcctcttcctcctgg 91 ||||||||||||||| ||||||||| Sbjct: 55165 gccgtgctcctcctcctcctcctgg 55189
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 accaccacggcctctcccaccaccg 326 |||||||||||||||||| |||||| Sbjct: 51635 accaccacggcctctccccccaccg 51659
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 338 ccggcccgggcgaggtccgcg 358 ||||||||||||||||||||| Sbjct: 5828977 ccggcccgggcgaggtccgcg 5828997
>emb|BX000346.3|CNS08CDC Oryza sativa chromosome 12, . BAC OSJNBb0084C05 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 117585 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tcgccgtgctcctcctcttcctcct 89 |||||||||||||||||||| |||| Sbjct: 63689 tcgccgtgctcctcctcttcgtcct 63665
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggccg 94 ||||||||||||||||||||| Sbjct: 118420 tcctcctcttcctcctggccg 118440
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggccg 94 ||||||||||||||||||||| Sbjct: 4101 tcctcctcttcctcctggccg 4121
>dbj|AP006587.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-163O19, complete sequence Length = 172438 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gccgtgctcctcctcttcctcctgg 91 ||||||||||||||| ||||||||| Sbjct: 107637 gccgtgctcctcctcctcctcctgg 107661
>gb|AE003802.3| Drosophila melanogaster chromosome 2R, section 48 of 73 of the complete sequence Length = 246095 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 52864 cgtgctcctcctcttcctcct 52884
>gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride channel mRNA, complete cds Length = 2344 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cccaccgccgcccctgccacc 277 ||||||||||||||||||||| Sbjct: 674 cccaccgccgcccctgccacc 654
>gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride channel mRNA, complete cds Length = 2553 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 257 cccaccgccgcccctgccacc 277 ||||||||||||||||||||| Sbjct: 721 cccaccgccgcccctgccacc 701
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcgccgtgctcctcctcttcctcct 89 |||||||||||||||||||| |||| Sbjct: 5534439 tcgccgtgctcctcctcttcgtcct 5534463 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccacggcctctcccaccacc 325 |||||||||||||||||||| Sbjct: 3353637 ccacggcctctcccaccacc 3353618
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 tcgccgtgctcctcctcttcctcct 89 |||||||||||||||||||| |||| Sbjct: 87255 tcgccgtgctcctcctcttcgtcct 87279
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 65 tcgccgtgctcctcctcttcctcct 89 |||||||||||||||||||| |||| Sbjct: 118435 tcgccgtgctcctcctcttcgtcct 118411
>emb|AJ575143.1|SMA575143 Sordaria macrospora partial smu6230 gene for putative protein kinase Length = 861 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 cgtgctcctcctcttcctcct 89 ||||||||||||||||||||| Sbjct: 253 cgtgctcctcctcttcctcct 233
>gb|U73642.1|U73642 Human Chromosome 11 Cosmid cSRL30h11, complete sequence Length = 41032 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 67 gccgtgctcctcctcttcctcctgg 91 ||||||||||||||| ||||||||| Sbjct: 23071 gccgtgctcctcctcctcctcctgg 23095
>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete sequence Length = 227993 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggcc 93 ||||||||||||||||||||| Sbjct: 121015 ctcctcctcttcctcctggcc 120995
>dbj|AB065505.1| Homo sapiens gene for seven transmembrane helix receptor, complete cds, isolate:CBRC7TM_68 Length = 60989 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 67 gccgtgctcctcctcttcctcctgg 91 ||||||||||||||| ||||||||| Sbjct: 5815 gccgtgctcctcctcctcctcctgg 5791
>gb|AC102140.15| Mus musculus chromosome 3, clone RP23-286J21, complete sequence Length = 192833 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 85483 tgctcctcctcttcctcctg 85464
>ref|NM_000164.2| Homo sapiens gastric inhibitory polypeptide receptor (GIPR), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1401 ctccggcccgggcgaggtcc 1420
>gb|BC101673.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone MGC:126722 IMAGE:8069179), complete cds Length = 1540 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1388 ctccggcccgggcgaggtcc 1407
>gb|AC129897.2| Ciona savignyi, clone XX-699457L15, complete sequence Length = 38707 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 15109 gctcctcctcttcctcctgg 15090
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 caccgtcacctctggtgggc 299 |||||||||||||||||||| Sbjct: 1785339 caccgtcacctctggtgggc 1785358
>ref|NM_184260.2| Oryza sativa (japonica cultivar-group), mRNA Length = 913 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 |||||| ||| ||||||||||||||||| Sbjct: 582 ccctcgtcgtcctcctcctcttcctcct 555
>ref|XM_522307.1| PREDICTED: Pan troglodytes similar to synArfGEF (LOC466907), mRNA Length = 5442 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 464 gcccagacaccgacgccgagcagaagcc 491 |||||| | ||||||||||||||||||| Sbjct: 1517 gcccagccgccgacgccgagcagaagcc 1544
>ref|XM_467841.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cctcctcttcctcctggccgtcgc 98 ||||||||||||||| |||||||| Sbjct: 86 cctcctcttcctcctcgccgtcgc 109
>ref|XM_506976.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1288_G09.19 mRNA Length = 898 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cctcctcttcctcctggccgtcgc 98 ||||||||||||||| |||||||| Sbjct: 91 cctcctcttcctcctcgccgtcgc 114
>ref|XM_465613.1| Oryza sativa (japonica cultivar-group), mRNA Length = 285 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ccacctccaccgtcacctct 292 |||||||||||||||||||| Sbjct: 175 ccacctccaccgtcacctct 156
>ref|XM_518377.1| PREDICTED: Pan troglodytes similar to advanced glycosylation end product-specific receptor isoform 1 precursor (LOC462584), mRNA Length = 1188 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1126 gctcctcctcttcctcctgg 1107
>ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctcc 280 |||||||||||||||||||| Sbjct: 1207 ccgccgcccctgccacctcc 1188
>gb|AC164176.12| Mus musculus 10 BAC RP23-8O18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216064 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 ||||| |||| ||||||||||||||||| Sbjct: 1623 ccctctccgtcctcctcctcttcctcct 1596
>ref|NM_023547.1| Mus musculus zinc finger, HIT type 4 (Znhit4), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 407 tcctcctcttcctcctggcc 388
>gb|U89336.1|HSMHC3W5A Homo sapiens HLA class III region containing NOTCH4 gene, partial sequence, homeobox PBX2 (HPBX) gene, receptor for advanced glycosylation end products (RAGE) gene, complete cds, and 6 unidentified cds, complete sequence Length = 62944 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 22040 gctcctcctcttcctcctgg 22021
>gb|BC058788.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone MGC:65219 IMAGE:6440887), complete cds Length = 1161 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 453 tcctcctcttcctcctggcc 434
>gb|BC019383.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone MGC:30535 IMAGE:5010975), complete cds Length = 1155 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 441 tcctcctcttcctcctggcc 422
>gb|BC047990.1| Mus musculus zinc finger, HIT type 4, mRNA (cDNA clone IMAGE:6509498), partial cds Length = 1155 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 442 tcctcctcttcctcctggcc 423
>gb|AC160400.12| Mus musculus 6 BAC RP23-321M22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219634 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 49920 tcctcctcttcctcctggcc 49939
>gb|AY755627.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon3-10 variant (AGER) mRNA, complete cds, alternatively spliced Length = 493 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 410 gctcctcctcttcctcctgg 391
>gb|AY755626.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon2-6 variant (AGER) mRNA, complete cds, alternatively spliced Length = 578 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 495 gctcctcctcttcctcctgg 476
>gb|AY755625.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon3-7 variant (AGER) mRNA, complete cds, alternatively spliced Length = 864 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 781 gctcctcctcttcctcctgg 762
>gb|AY755624.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon 3 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1204 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1121 gctcctcctcttcctcctgg 1102
>gb|AY755623.1| Homo sapiens receptor for advanced glycosylation end-products deletion exon 8 and intron 9 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1149 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1066 gctcctcctcttcctcctgg 1047
>gb|AY755622.1| Homo sapiens receptor for advanced glycosylation end-products intron 4&9 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1249 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1166 gctcctcctcttcctcctgg 1147
>gb|AY755621.1| Homo sapiens receptor for advanced glycosylation end-products intron 4 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1294 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1211 gctcctcctcttcctcctgg 1192
>gb|AY755620.1| Homo sapiens receptor for advanced glycosylation end-products intron 9 variant (AGER) mRNA, complete cds, alternatively spliced Length = 1201 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1118 gctcctcctcttcctcctgg 1099
>gb|AY755619.1| Homo sapiens receptor for advanced glycosylation end-products (AGER) mRNA, complete cds, alternatively spliced Length = 1246 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1163 gctcctcctcttcctcctgg 1144
>ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 cggctcccctcccaccgccgcccc 270 ||||||||| |||||||||||||| Sbjct: 3030 cggctccccccccaccgccgcccc 3007
>gb|AC115928.10| Mus musculus chromosome 18, clone RP24-530D22, complete sequence Length = 182777 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 1307 tgctcctcctcttcctcctg 1288
>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence Length = 213513 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctccaccg 284 |||||||| ||||||||||||||| Sbjct: 167026 ccgccgccactgccacctccaccg 167003
>ref|NM_001136.3| Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 1, mRNA Length = 1414 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1177 gctcctcctcttcctcctgg 1158
>ref|NM_172197.1| Homo sapiens advanced glycosylation end product-specific receptor (AGER), transcript variant 2, mRNA Length = 1259 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1022 gctcctcctcttcctcctgg 1003
>gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal RNA gene, partial sequence Length = 960 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ccctcccaccgccgcccctg 272 |||||||||||||||||||| Sbjct: 276 ccctcccaccgccgcccctg 295
>ref|XM_989990.1| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctccaccg 284 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_910737.2| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctccaccg 284 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_140310.8| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctccaccg 284 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_976894.1| PREDICTED: Mus musculus similar to PDZ domain containing 2 (LOC669751), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 accgccgcccctgccacctccacc 283 |||||||||||||||||| ||||| Sbjct: 846 accgccgcccctgccaccaccacc 823
>ref|XM_897627.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 5 (Pdzd2), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 accgccgcccctgccacctccacc 283 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>ref|XM_920266.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 9 (Pdzd2), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 accgccgcccctgccacctccacc 283 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence Length = 206967 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 accgccgcccctgccacctccacc 283 |||||||||||||||||| ||||| Sbjct: 60792 accgccgcccctgccaccaccacc 60769
>ref|XM_801527.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053509037.20) partial mRNA Length = 2310 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 1276 ctcctcctcttcctcctggc 1257
>gb|AC131684.4| Mus musculus BAC clone RP23-371K6 from chromosome 10, complete sequence Length = 190874 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 ||||| |||| ||||||||||||||||| Sbjct: 83250 ccctctccgtcctcctcctcttcctcct 83277
>ref|XM_806281.1| Trypanosoma cruzi strain CL Brener surface protease GP63 (Tc00.1047053507559.110) partial mRNA Length = 1968 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 1018 ctcctcctcttcctcctggc 999
>emb|CR376861.6| Zebrafish DNA sequence from clone CH211-193L9 in linkage group 14, complete sequence Length = 38313 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gtgctcctcctcttcctcct 89 |||||||||||||||||||| Sbjct: 9240 gtgctcctcctcttcctcct 9259
>gb|AC122811.4| Mus musculus BAC clone RP23-281J12 from 12, complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 56566 tgctcctcctcttcctcctg 56547
>emb|CR729482.2|CNS0GPTC Tetraodon nigroviridis full-length cDNA Length = 1841 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 1578 tgctcctcctcttcctcctg 1559
>emb|CR711534.2|CNS0GBYY Tetraodon nigroviridis full-length cDNA Length = 654 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 180 ctcctcctcttcctcctggc 161
>emb|CR727219.2|CNS0GO2H Tetraodon nigroviridis full-length cDNA Length = 1841 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 1579 tgctcctcctcttcctcctg 1560
>gb|AF537303.1| Homo sapiens advanced glycosylation end product-specific receptor RAGE3 (AGER) mRNA, partial cds, alternatively spliced Length = 698 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 695 gctcctcctcttcctcctgg 676
>gb|AF536237.1| Homo sapiens advanced glycosylation end product-specific receptor variant sRAGE2 (AGER) mRNA, partial cds, alternatively spliced Length = 511 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 508 gctcctcctcttcctcctgg 489
>gb|AF536236.1| Homo sapiens advanced glycosylation end product-specific receptor variant sRAGE1 (AGER) mRNA, partial cds, alternatively spliced Length = 653 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 650 gctcctcctcttcctcctgg 631
>ref|XM_773797.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_254_49005_48694) partial mRNA Length = 312 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 tcgccgtgctcctcctcttc 84 |||||||||||||||||||| Sbjct: 103 tcgccgtgctcctcctcttc 122
>ref|XM_773798.1| Giardia lamblia ATCC 50803 myosin heavy chain (GLP_254_48710_52516) partial mRNA Length = 3807 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tcgccgtgctcctcctcttc 84 |||||||||||||||||||| Sbjct: 194 tcgccgtgctcctcctcttc 175
>emb|CR710999.2|CNS0GBK3 Tetraodon nigroviridis full-length cDNA Length = 1168 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 657 ctcctcctcttcctcctggc 638
>emb|CR702053.2|CNS0G4NL Tetraodon nigroviridis full-length cDNA Length = 1333 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 182 ctcctcctcttcctcctggc 163
>emb|CR691608.2|CNS0FWLG Tetraodon nigroviridis full-length cDNA Length = 1341 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 189 ctcctcctcttcctcctggc 170
>gb|BC071955.1| Homo sapiens cDNA clone IMAGE:6574557, **** WARNING: chimeric clone **** Length = 2382 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 92 gctcctcctcttcctcctgg 73
>emb|BX284686.9| Human DNA sequence from clone DASS-39F23 on chromosome 6, complete sequence Length = 80063 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 50723 gctcctcctcttcctcctgg 50742
>emb|AL845464.5| Human DNA sequence from clone DAQB-143M3 on chromosome 6 Contains the C6orf31 gene for chromosome 6 open reading frame 31, the PPT2 gene for palmitoyl-protein thioesterase 2, the EGFL8 gene for EGF-like-domain, multiple 8, the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha), the RNF5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the GPSM3 gene (previously C6orf9) for G-protein signalling modulator 3 (AGS3-like, C. elegans), the 3' end of the Notch4 gene for the Notch homolog 4 (Drosophila) and five CpG islands, complete sequence Length = 56747 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 40963 gctcctcctcttcctcctgg 40982
>emb|AL662830.14| Human DNA sequence from clone XXbac-173E2 on chromosome 6 contains the RNF 5 gene for ring finger protein 5, the AGER gene for advanced glycosylation end product-specific receptor, the PBX2 gene for pre-B-cell leukemia transcription factor 2, the gene for chromosome 6 open reading frame 9, the NOTCH4 gene for Notch homolog 4 (Drosophila) and one CpG island, complete sequence Length = 103327 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 4846 gctcctcctcttcctcctgg 4865
>emb|AL662884.11| Human DNA sequence from clone XXbac-300A18 on chromosome 6 contains the 5' end of the TNXB gene for tenascin XB (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS), the CREBL1 gene for cAMP responsive element binding protein-like 1 (CREBL1, G13, CREB-RP), the FKBPL gene for FK506 binding protein like (FKBPL, NG7, DIR1), the gene for chromosome 6 open reading frame 31 (C6orf31, NG5), a putative novel transcript, the PPT2 gene for palmitoyl-protein thioesterase 2 (PPT2, G14), the gene for chromosome 6 open reading frame 8 (C6orf8, NG3), the AGPAT1 gene for 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) (AGPAT1,G15, LPAATA, MGC5423, LPAAT-alpha), the RNF5 gene for ring finger protein 5 (RNF5, G16, NG2, RING5), the AGER gene for advanced glycosylation end product-specific receptor (AGER, RAGE), the PBX2 gene for pre-B-cell leukemia transcription factor 2 (PBX2, G17, HOX12, PBX2MHC), the C6orf9 gene for chromosome 6 open reading frame 9 (C6orf9, G18, NG1), the NOTCH4 gene for Notch homolog 4 (Drosophila) (NOTCH4, INT3, NOTCH3) and seven CpG islands, complete sequence Length = 137935 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 94032 gctcctcctcttcctcctgg 94051
>emb|AL512328.15| Human DNA sequence from clone RP11-505D24 on chromosome 1 Contains the 5' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8), the 5' end of the CAPN9 gene for calpain 9 (nCL-4) and the 3' end of a variant of a novel gene, complete sequence Length = 55722 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 6601 tcctcctcttcctcctggcc 6620
>emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O18 on chromosome 1p32.3-34.1 Contains GSSs, complete sequence Length = 101453 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 ggaagagcccagggatgctg 427 |||||||||||||||||||| Sbjct: 60949 ggaagagcccagggatgctg 60968
>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence Length = 214509 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ccacggcctctcccaccacc 325 |||||||||||||||||||| Sbjct: 107459 ccacggcctctcccaccacc 107478
>emb|X68794.2|DMTENA Drosophila melanogaster mRNA for type II transmembrane protein (ten-a gene) Length = 10216 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 9193 gctcctcctcttcctcctgg 9174
>gb|AY436323.1| Homo sapiens angiotensinogen (serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 8) (AGT) gene, complete cds Length = 15593 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 8675 tcctcctcttcctcctggcc 8656
>gb|AC164625.6| Mus musculus 10 BAC RP24-366E11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 171748 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 ||||| |||| ||||||||||||||||| Sbjct: 95352 ccctctccgtcctcctcctcttcctcct 95379
>emb|CR847859.13| Zebrafish DNA sequence from clone DKEYP-2F4 in linkage group 14, complete sequence Length = 124837 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 gtgctcctcctcttcctcct 89 |||||||||||||||||||| Sbjct: 45680 gtgctcctcctcttcctcct 45661
>emb|CR933878.7| Human DNA sequence from clone DAMC-108L3 on chromosome 6, complete sequence Length = 102907 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 51104 gctcctcctcttcctcctgg 51123
>emb|BX648378.1|HSM808526 Homo sapiens genomic DNA; cDNA DKFZp686C13224 (from clone DKFZp686C13224) Length = 5062 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1438 gctcctcctcttcctcctgg 1457
>emb|CR812478.6| Human DNA sequence from clone DAAP-218M18 on chromosome 6, complete sequence Length = 75620 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 48277 gctcctcctcttcctcctgg 48296
>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence Length = 115385 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 gcccctgccacctccaccgtcacc 289 ||||| |||||||||||||||||| Sbjct: 31364 gcccccgccacctccaccgtcacc 31341
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 gcccctgccacctccaccgtcacc 289 ||||| |||||||||||||||||| Sbjct: 122778 gcccccgccacctccaccgtcacc 122755
>gb|AY129446.1| Drosophila melanogaster LD20608 full insert cDNA Length = 4033 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 3009 gctcctcctcttcctcctgg 2990
>gb|AC087890.18| Mus Musculus Strain C57BL6/J Chromosome 10 BAC, RP23-348F2, Complete Sequence, complete sequence Length = 194881 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 164251 tgctcctcctcttcctcctg 164232
>ref|NM_001038632.1| Sus scrofa DNase X (LOC654408), mRNA Length = 1251 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctggccg 94 ||||||||||| |||||||||||| Sbjct: 236 tgctcctcctcctcctcctggccg 259
>gb|AC023721.3| Drosophila melanogaster X BAC RP98-5L4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166902 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 2383 gctcctcctcttcctcctgg 2364
>gb|AC023687.3| Drosophila melanogaster X BAC RP98-36C7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185848 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 36120 gctcctcctcttcctcctgg 36139
>ref|NM_078582.3| Drosophila melanogaster Tenascin accessory CG32659-RA (Ten-a), mRNA Length = 10205 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 9189 gctcctcctcttcctcctgg 9170
>dbj|AK159017.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530033M09 product:PDZ domain containing 3, full insert sequence Length = 4071 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 260 accgccgcccctgccacctccacc 283 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>dbj|AK155473.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630230M04 product:hypothetical Alanine-rich region profile containing protein, full insert sequence Length = 1146 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgcccctgccacctccaccg 284 |||||||| ||||||||||||||| Sbjct: 135 ccgccgccactgccacctccaccg 158
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ggcgaggtccgcgaccatcc 365 |||||||||||||||||||| Sbjct: 5225038 ggcgaggtccgcgaccatcc 5225019
>emb|BX927239.5| Human DNA sequence from clone DAMA-358M23 on chromosome 6, complete sequence Length = 102588 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 40939 gctcctcctcttcctcctgg 40958
>dbj|AK010946.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510009I23 product:PAPA-1, full insert sequence Length = 1200 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 509 tcctcctcttcctcctggcc 490
>gb|S79852.1| glucose-dependent insulinotropic polypeptide receptor [human, insulinoma cells, mRNA Partial, 1849 nt] Length = 1849 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1396 ctccggcccgggcgaggtcc 1415
>gb|AC154568.2| Mus musculus BAC clone RP23-246L11 from chromosome 16, complete sequence Length = 182206 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 156754 tgctcctcctcttcctcctg 156735
>gb|AC135862.4| Mus musculus BAC clone RP23-323B2 from chromosome 10, complete sequence Length = 203324 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 52928 tgctcctcctcttcctcctg 52947
>dbj|AK052308.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025A21 product:hypothetical protein, full insert sequence Length = 1179 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ccgccgcccctgccacctccaccg 284 |||||||| ||||||||||||||| Sbjct: 153 ccgccgccactgccacctccaccg 176
>gb|DQ350717.1| Ajellomyces capsulatus nitrosative stress induced transcription 64 (NIT64) gene, partial sequence Length = 2276 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ctcctcctcttcctcctggccgtc 96 ||||||||||||||||| |||||| Sbjct: 503 ctcctcctcttcctcctcgccgtc 526
>gb|AC148714.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457P02, complete sequence Length = 159822 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 10161 gctcctcctcttcctcctgg 10180
>gb|AC148664.1| Macaca mulatta Major Histocompatibility Complex BAC MMU021E24, complete sequence Length = 189424 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 186781 gctcctcctcttcctcctgg 186800
>gb|BC095494.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone IMAGE:7002006), partial cds Length = 1399 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1300 ctccggcccgggcgaggtcc 1319
>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human BAC Library) complete sequence Length = 160039 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 ggaagagcccagggatgctg 427 |||||||||||||||||||| Sbjct: 39991 ggaagagcccagggatgctg 39972
>gb|BC093723.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone MGC:120758 IMAGE:7939568), complete cds Length = 1545 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1388 ctccggcccgggcgaggtcc 1407
>dbj|D49559.2| Homo sapiens gene for gastric inhibitory polypeptide receptor, complete cds Length = 13809 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 13698 ctccggcccgggcgaggtcc 13717
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 251 tcccctcccaccgccgcccctgcc 274 |||||||||||| ||||||||||| Sbjct: 63951 tcccctcccaccaccgcccctgcc 63974
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 gtggacgagggcgtcctccggctc 252 |||||||||||| ||||||||||| Sbjct: 2286463 gtggacgagggcatcctccggctc 2286440 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 303 ccaccacggcctctcccaccaccgcggc 330 ||||||| ||||| |||||||||||||| Sbjct: 216259 ccaccaccgcctcgcccaccaccgcggc 216232
>ref|XM_233266.2| PREDICTED: Rattus norvegicus similar to hypothetical protein 4732467L16 (LOC298300), mRNA Length = 2552 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 465 tcctcctcttcctcctggcc 446
>ref|XM_575576.1| PREDICTED: Rattus norvegicus similar to PAP-1 binding protein (LOC500225), mRNA Length = 1667 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 789 tcctcctcttcctcctggcc 770
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctcc 280 |||||||||||||||||||| Sbjct: 96696 ccgccgcccctgccacctcc 96677
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ccgccgcccctgccacctcc 280 |||||||||||||||||||| Sbjct: 7533 ccgccgcccctgccacctcc 7514
>gb|AC074239.5| Homo sapiens BAC clone CTD-2011N5 from 2, complete sequence Length = 129738 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 23817 tgctcctcctcttcctcctg 23836
>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419C03 Length = 146929 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ccacctccaccgtcacctct 292 |||||||||||||||||||| Sbjct: 38938 ccacctccaccgtcacctct 38919
>dbj|AK189382.1| Mus musculus cDNA, clone:Y0G0148P15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000032109, based on BLAT search Length = 207 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 89 tcctcctcttcctcctggcc 70
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctggccg 94 ||||||||||| |||||||||||| Sbjct: 1745986 tgctcctcctcatcctcctggccg 1746009
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 |||||| ||| ||||||||||||||||| Sbjct: 78995 ccctcgtcgtcctcctcctcttcctcct 79022
>dbj|AB054537.1| Mus musculus gene for PAPA-1, complete cds Length = 1237 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 502 tcctcctcttcctcctggcc 483
>gb|AC107822.18| Mus musculus chromosome 7, clone RP23-182C11, complete sequence Length = 220443 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 gtgctcctcctcttcctcct 89 |||||||||||||||||||| Sbjct: 117119 gtgctcctcctcttcctcct 117138
>gb|AC116769.11| Mus musculus chromosome 15, clone RP23-415L16, complete sequence Length = 201535 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 25184 tgctcctcctcttcctcctg 25165
>emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA gene, isolate A330 Length = 1097 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ccctcccaccgccgcccctg 272 |||||||||||||||||||| Sbjct: 275 ccctcccaccgccgcccctg 294
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cctcctcttcctcctggccgtcgc 98 ||||||||||||||| |||||||| Sbjct: 74843 cctcctcttcctcctcgccgtcgc 74866
>dbj|AK104930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F02, full insert sequence Length = 801 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cctcctcttcctcctggccgtcgc 98 ||||||||||||||| |||||||| Sbjct: 86 cctcctcttcctcctcgccgtcgc 109
>emb|AJ133822.1|HSA133822 Homo sapiens mRNA for receptor for Advanced Glycation End Product, secreted isoform (RAGEsec gene) Length = 1250 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1013 gctcctcctcttcctcctgg 994
>emb|AJ238896.1|HSA238896 Homo sapiens partial RAGE gene, exons 9 to 11 Length = 747 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 434 gctcctcctcttcctcctgg 415
>dbj|AK065736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038J04, full insert sequence Length = 898 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 cctcctcttcctcctggccgtcgc 98 ||||||||||||||| |||||||| Sbjct: 91 cctcctcttcctcctcgccgtcgc 114
>gb|BC020669.1| Homo sapiens advanced glycosylation end product-specific receptor, transcript variant 1, mRNA (cDNA clone MGC:22357 IMAGE:4718076), complete cds Length = 1436 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1172 gctcctcctcttcctcctgg 1153
>gb|AC121887.4| Mus musculus BAC clone RP24-142B15 from 5, complete sequence Length = 234919 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 30818 tgctcctcctcttcctcctg 30837 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 30782 tgctcctcctcttcctcctg 30801
>dbj|AK060424.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-H04, full insert sequence Length = 913 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 62 ccctcgccgtgctcctcctcttcctcct 89 |||||| ||| ||||||||||||||||| Sbjct: 582 ccctcgtcgtcctcctcctcttcctcct 555
>emb|AL359207.7| Human DNA sequence from clone RP11-533N14 on chromosome 1 Contains the 3' end of the BCL9 gene for B-cell CLL/lymphoma 9 protein and a gene for lysophosphatidic acid phosphatase ACP6 protein, complete sequence Length = 112707 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 17742 tcctcctcttcctcctggcc 17723
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 gcccgggcgaggtccgcgac 360 |||||||||||||||||||| Sbjct: 171853 gcccgggcgaggtccgcgac 171834
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1765 ctccggcccgggcgaggtcc 1784
>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the complete sequence Length = 315134 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 314018 gctcctcctcttcctcctgg 313999
>gb|AC006132.1|AC006132 Homo sapiens chromosome 19, cosmid R28204, complete sequence Length = 41572 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 41182 ctccggcccgggcgaggtcc 41201
>dbj|AB061669.1| Homo sapiens RAGE mRNA for N-terminal truncated form of receptor for advanced glycation endproducts, complete cds Length = 1451 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1360 gctcctcctcttcctcctgg 1341
>dbj|AB061668.1| Homo sapiens RAGE mRNA for soluble form of receptor for advanced glycation endproducts, complete cds Length = 1223 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1132 gctcctcctcttcctcctgg 1113
>gb|AC074310.29| Mus musculus strain C57BL/6J chromosome 1 clone rp23-137i20, complete sequence Length = 222328 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccacggcctctcccaccacc 325 |||||||||||||||||||| Sbjct: 200776 ccacggcctctcccaccacc 200757
>gb|AC079680.34| Mus musculus strain C57BL/6J chromosome 10 clone rp23-282p18, complete sequence Length = 175217 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 47666 tgctcctcctcttcctcctg 47647
>gb|AC104324.21| Mus musculus strain C57BL/6J chromosome 6 clone rp23-177j21, complete sequence Length = 193277 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 tcctcctcttcctcctggcc 93 |||||||||||||||||||| Sbjct: 160629 tcctcctcttcctcctggcc 160648
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 tcgacgtcgtgcccaccgag 390 |||||||||||||||||||| Sbjct: 1907369 tcgacgtcgtgcccaccgag 1907350
>gb|DQ116782.1| Sus scrofa DNase X mRNA, complete cds Length = 1251 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctggccg 94 ||||||||||| |||||||||||| Sbjct: 236 tgctcctcctcctcctcctggccg 259
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agctggaggcggtcgcggag 447 |||||||||||||||||||| Sbjct: 2973418 agctggaggcggtcgcggag 2973399
>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 137936 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccacggcctctcccaccacc 325 |||||||||||||||||||| Sbjct: 32745 ccacggcctctcccaccacc 32726
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cctcctcttcctcctggccg 94 |||||||||||||||||||| Sbjct: 1502353 cctcctcttcctcctggccg 1502334 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 tgctcctcctcttcctcctggccg 94 ||||||||||| |||||||||||| Sbjct: 1435555 tgctcctcctcatcctcctggccg 1435578
>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence Length = 203369 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gggaagaggaagagcccagg 420 |||||||||||||||||||| Sbjct: 44634 gggaagaggaagagcccagg 44653
>gb|AF025391.1|AF025391 Thermus thermophilus DNA polymerase III holoenzyme tau subunit (dnaX) gene, complete cds Length = 2724 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cctcctcttcctcctggccg 94 |||||||||||||||||||| Sbjct: 493 cctcctcttcctcctggccg 474
>emb|AL928542.12| Mouse DNA sequence from clone RP23-338J24 on chromosome 4, complete sequence Length = 189983 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ctcctcctcttcctcctggc 92 |||||||||||||||||||| Sbjct: 51994 ctcctcctcttcctcctggc 52013
>emb|AL808131.9| Mouse DNA sequence from clone RP23-367H7 on chromosome X, complete sequence Length = 210322 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 70659 tgctcctcctcttcctcctg 70640
>gb|U39231.1|HSU39231 Human GIP receptor (GIPR) mRNA, complete cds Length = 2025 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1401 ctccggcccgggcgaggtcc 1420
>emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chromosome 11, complete sequence Length = 247743 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 402 ggaagaggaagagcccaggg 421 |||||||||||||||||||| Sbjct: 109506 ggaagaggaagagcccaggg 109525
>emb|X81832.1|HSGDIPR H.sapiens mRNA for glucose-dependant insulinotropic polypeptide receptor gene Length = 2181 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctccggcccgggcgaggtcc 355 |||||||||||||||||||| Sbjct: 1863 ctccggcccgggcgaggtcc 1882
>gb|M10296.1|MUSIR3E1 Mouse DNA with homology to EBV IR3 repeat, segment 1, clone Mu2 Length = 460 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 tgctcctcctcttcctcctg 90 |||||||||||||||||||| Sbjct: 346 tgctcctcctcttcctcctg 327
>gb|M91211.1|HUMRAGE Human receptor for advanced glycosylation end products (RAGE) mRNA, partial cds Length = 1391 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1153 gctcctcctcttcctcctgg 1134
>dbj|D28769.1|HUMHOXRAGE Human HOX12 and RAGE genes, complete cds Length = 10108 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 9683 gctcctcctcttcctcctgg 9664
>dbj|AB036432.1| Homo sapiens RAGE mRNA for advanced glycation endproducts receptor, complete cds Length = 1268 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gctcctcctcttcctcctgg 91 |||||||||||||||||||| Sbjct: 1177 gctcctcctcttcctcctgg 1158
>emb|AL606930.13| Mouse DNA sequence from clone RP23-131D5 on chromosome 4, complete sequence Length = 133741 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tccaccctcctacaatggcc 51 |||||||||||||||||||| Sbjct: 61960 tccaccctcctacaatggcc 61941 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,183,626 Number of Sequences: 3902068 Number of extensions: 4183626 Number of successful extensions: 168730 Number of sequences better than 10.0: 197 Number of HSP's better than 10.0 without gapping: 202 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 166489 Number of HSP's gapped (non-prelim): 2241 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
