ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart22h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_849108.1| PREDICTED: Canis familiaris similar to Mucin-2 ... 46 0.12
2ref|XM_511878.1| PREDICTED: Pan troglodytes similar to hypotheti... 44 0.48
3ref|XM_479077.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.48
4gb|BC073974.1| Homo sapiens chondroadherin, mRNA (cDNA clone MGC... 44 0.48
5ref|NM_001267.1| Homo sapiens chondroadherin (CHAD), mRNA 44 0.48
6gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 44 0.48
7dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
8gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, co... 44 0.48
9gb|AF371328.1|AF371328 Homo sapiens chondroadherin mRNA, complet... 44 0.48
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
12gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.48
13dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
14dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
15dbj|AK071549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.48
16gb|BC036360.1| Homo sapiens chondroadherin, mRNA (cDNA clone MGC... 44 0.48
17gb|U96767.1|HSCHON01 Homo sapiens chondroadherin gene, 5'flankin... 44 0.48
18gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 1.9
19ref|NM_007030.1| Homo sapiens brain-specific protein p25 alpha (... 42 1.9
20gb|AC102866.5| Mus musculus chromosome 7, clone RP24-576L9, comp... 42 1.9
21gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genom... 42 1.9
22gb|AY652653.1| Homo sapiens conserved helix-loop-helix ubiquitou... 42 1.9
23gb|AC163491.2| Mus musculus chromosome 7, clone RP24-176N8, comp... 42 1.9
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
25gb|BC040496.1| Homo sapiens brain-specific protein p25 alpha, mR... 42 1.9
26gb|AC107736.10| Mus musculus chromosome 7, clone RP23-354B2, com... 42 1.9
27emb|AL138921.14| Human DNA sequence from clone RP11-316M21 on ch... 42 1.9
28gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.9
29dbj|AK133657.1| Mus musculus adult male pituitary gland cDNA, RI... 42 1.9
30dbj|AK154886.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 42 1.9
31gb|AC158299.7| Mus musculus chromosome 7, clone RP24-271L24, com... 42 1.9
32gb|AY042210.1| Mus musculus G protein-coupled receptor (MrgE) ge... 42 1.9
33gb|BC096766.1| Mus musculus MAS-related GPR, member E, mRNA (cDN... 42 1.9
34dbj|AK048528.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 42 1.9
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
36gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, comp... 42 1.9
37gb|AC011545.4|AC011545 Homo sapiens chromosome 19, cosmid R30477... 42 1.9
38emb|AJ311612.1|MMU311612 Mus musculus partial gene for NH3-depen... 42 1.9
39emb|AJ320231.1|MMU320231 Mus musculus domesticus partial mRNA fo... 42 1.9
40dbj|AK098392.1| Homo sapiens cDNA FLJ25526 fis, clone CBR07215, ... 42 1.9
41ref|NM_175534.2| Mus musculus MAS-related GPR, member E (Mrgpre)... 42 1.9
42gb|AC171313.5| Mus musculus chromosome 7, clone RP23-294D10, com... 42 1.9
43dbj|AB017016.1| Homo sapiens mRNA for p25 alpha, complete cds 42 1.9
44gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.5
45ref|XM_568431.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.5
46ref|XM_547220.2| PREDICTED: Canis familiaris similar to Axin-1 (... 40 7.5
47ref|XM_860399.1| PREDICTED: Canis familiaris similar to Axin-1 (... 40 7.5
48ref|XM_847228.1| PREDICTED: Canis familiaris similar to Axin-1 (... 40 7.5
49emb|AL512844.5| Human DNA sequence from clone RP11-90H3 on chrom... 40 7.5
50ref|XM_503946.1| Yarrowia lipolytica CLIB122, YALI0E14575g predi... 40 7.5
51gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, co... 40 7.5
52emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.5
53emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 7.5
54emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 40 7.5
55emb|BX510364.11| Zebrafish DNA sequence from clone CH211-81A17 i... 40 7.5
56gb|AC107871.10| Homo sapiens chromosome 15, clone RP11-315D16, c... 40 7.5
57gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, co... 40 7.5
58dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 7.5
59gb|U65510.1|RRU65510 Rhodospirillum rubrum alkyl hydroperoxide r... 40 7.5
60gb|AC156542.9| Mus musculus chromosome 1, clone RP23-370J16, com... 40 7.5
61gb|S82324.1| calcium/calmodulin-dependent protein kinase homolog... 40 7.5
62gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, com... 40 7.5
63gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.5
64gb|AC158317.1| Homo sapiens chromosome 19 clone WI2-1263I16, com... 40 7.5
65gb|AC112679.15| Mus musculus chromosome 1, clone RP23-199H14, co... 40 7.5
66gb|AC007827.5|AC007827 Drosophila melanogaster, chromosome 3R, r... 40 7.5
67gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 ... 40 7.5
68dbj|AB078884.1| Coturnix japonica DNA, major histocompatibility ... 40 7.5
69emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 7.5
70gb|AF147779.1|AF147779 Drosophila melanogaster Huntington diseas... 40 7.5
71gb|AE003766.2| Drosophila melanogaster chromosome 3R, section 10... 40 7.5
72dbj|AP003721.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.5
73dbj|AP000777.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.5
74gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 7.5
75gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.5
76gb|AC004126.1|AC004126 Human Chromosome 11q12.2 PAC clone pDJ606... 40 7.5
77emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 7.5
78gb|AC171684.1| Mus musculus BAC clone RP23-69D21 from chromosome... 40 7.5
79emb|AL158219.11| Human DNA sequence from clone RP5-876B19 on chr... 40 7.5
80emb|Y13993.1|MMY13993 Mus musculus mRNA for immunoglobulin VK do... 40 7.5
81gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, co... 40 7.5
82gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 7.5
83dbj|D84507.1|MZECDPKA Zea mays mRNA for CDPK-related protein kin... 40 7.5
84dbj|AP002091.2| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 7.5 
>ref|XM_849108.1| PREDICTED: Canis familiaris similar to Mucin-2 precursor (Intestinal
            mucin 2) (LOC611440), mRNA
          Length = 2901

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 336  cgccggcgtgttcggcacctgcttcgtgccc 366
            |||| ||||||||| ||||||||||||||||
Sbjct: 1512 cgcctgcgtgttcgacacctgcttcgtgccc 1542
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>ref|XM_511878.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ20920
            (LOC455121), mRNA
          Length = 4953

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 377  aggaggccgaggctgagcaaga 398
            ||||||||||||||||||||||
Sbjct: 2800 aggaggccgaggctgagcaaga 2821
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>ref|XM_479077.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1134

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 279 ccggagctccacccgcagcagc 300
           ||||||||||||||||||||||
Sbjct: 49  ccggagctccacccgcagcagc 70
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>gb|BC073974.1| Homo sapiens chondroadherin, mRNA (cDNA clone MGC:88039
           IMAGE:5730623), complete cds
          Length = 1739

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 aggaggccgaggctgagcaaga 398
           ||||||||||||||||||||||
Sbjct: 91  aggaggccgaggctgagcaaga 70
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>ref|NM_001267.1| Homo sapiens chondroadherin (CHAD), mRNA
          Length = 1789

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 aggaggccgaggctgagcaaga 398
           ||||||||||||||||||||||
Sbjct: 187 aggaggccgaggctgagcaaga 166
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 288   cacccgcagcagcagtagcagc 309
             ||||||||||||||||||||||
Sbjct: 24957 cacccgcagcagcagtagcagc 24978
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>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 288   cacccgcagcagcagtagcagc 309
             ||||||||||||||||||||||
Sbjct: 57495 cacccgcagcagcagtagcagc 57516
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>gb|AC021491.16| Homo sapiens chromosome 17, clone RP11-94C24, complete sequence
          Length = 175262

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 377    aggaggccgaggctgagcaaga 398
              ||||||||||||||||||||||
Sbjct: 140739 aggaggccgaggctgagcaaga 140718
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>gb|AF371328.1|AF371328 Homo sapiens chondroadherin mRNA, complete cds
          Length = 1444

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 aggaggccgaggctgagcaaga 398
           ||||||||||||||||||||||
Sbjct: 104 aggaggccgaggctgagcaaga 83
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 279      ccggagctccacccgcagcagc 300
                ||||||||||||||||||||||
Sbjct: 24646284 ccggagctccacccgcagcagc 24646305
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 288     cacccgcagcagcagtagcagc 309
               ||||||||||||||||||||||
Sbjct: 8060844 cacccgcagcagcagtagcagc 8060865
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 330     gggcgtcgccggcgtgttcggc 351
               ||||||||||||||||||||||
Sbjct: 2680798 gggcgtcgccggcgtgttcggc 2680777
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>dbj|AP005809.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0039M16
          Length = 133229

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 279    ccggagctccacccgcagcagc 300
              ||||||||||||||||||||||
Sbjct: 102351 ccggagctccacccgcagcagc 102372
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>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBb0040H10
          Length = 132919

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 279  ccggagctccacccgcagcagc 300
            ||||||||||||||||||||||
Sbjct: 2221 ccggagctccacccgcagcagc 2242
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>dbj|AK071549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105C06, full
           insert sequence
          Length = 1134

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 279 ccggagctccacccgcagcagc 300
           ||||||||||||||||||||||
Sbjct: 49  ccggagctccacccgcagcagc 70
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>gb|BC036360.1| Homo sapiens chondroadherin, mRNA (cDNA clone MGC:34613
           IMAGE:5163623), complete cds
          Length = 1708

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 aggaggccgaggctgagcaaga 398
           ||||||||||||||||||||||
Sbjct: 89  aggaggccgaggctgagcaaga 68
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>gb|U96767.1|HSCHON01 Homo sapiens chondroadherin gene, 5'flanking region and exon 1
          Length = 1258

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 377 aggaggccgaggctgagcaaga 398
           ||||||||||||||||||||||
Sbjct: 319 aggaggccgaggctgagcaaga 298
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 238     caggcctcgtcgcgcagcgcc 258
               |||||||||||||||||||||
Sbjct: 3190196 caggcctcgtcgcgcagcgcc 3190176
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>ref|NM_007030.1| Homo sapiens brain-specific protein p25 alpha (TPPP), mRNA
          Length = 5019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 451  gggagcaggagcgccggcttc 471
            |||||||||||||||||||||
Sbjct: 1877 gggagcaggagcgccggcttc 1857
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>gb|AC102866.5| Mus musculus chromosome 7, clone RP24-576L9, complete sequence
          Length = 157163

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 55    tcatcaaggtctctcctcctctgtt 79
             |||||||||||||| ||||||||||
Sbjct: 41808 tcatcaaggtctcttctcctctgtt 41784
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>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    tctctcctcctctgttccgcc 84
             |||||||||||||||||||||
Sbjct: 15617 tctctcctcctctgttccgcc 15597
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>gb|AY652653.1| Homo sapiens conserved helix-loop-helix ubiquitous kinase (CHUK) gene,
             complete cds
          Length = 45185

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 20    atgaaccacaatcagcatcag 40
             |||||||||||||||||||||
Sbjct: 37417 atgaaccacaatcagcatcag 37397
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>gb|AC163491.2| Mus musculus chromosome 7, clone RP24-176N8, complete sequence
          Length = 164417

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 55    tcatcaaggtctctcctcctctgtt 79
             |||||||||||||| ||||||||||
Sbjct: 12888 tcatcaaggtctcttctcctctgtt 12864
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 64       tctctcctcctctgttccgcc 84
                |||||||||||||||||||||
Sbjct: 22420370 tctctcctcctctgttccgcc 22420350
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>gb|BC040496.1| Homo sapiens brain-specific protein p25 alpha, mRNA (cDNA clone
            IMAGE:5302992), partial cds
          Length = 4086

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 451  gggagcaggagcgccggcttc 471
            |||||||||||||||||||||
Sbjct: 1890 gggagcaggagcgccggcttc 1870
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>gb|AC107736.10| Mus musculus chromosome 7, clone RP23-354B2, complete sequence
          Length = 272413

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 55     tcatcaaggtctctcctcctctgtt 79
              |||||||||||||| ||||||||||
Sbjct: 237076 tcatcaaggtctcttctcctctgtt 237052
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>emb|AL138921.14| Human DNA sequence from clone RP11-316M21 on chromosome 10 Contains the
              3' end of gene FLJ30135, the CHUK gene for conserved
              helix-loop ubiquitous kinase, a novel gene (FLJ32012), a
              novel gene containing FLJ10998, FLJ40576, FLJ3922,
              FLJ30751, a prohibitin (PHB) pseudogene, a tropomyosin
              (TPM4) pseudogene and three CpG islands, complete sequence
          Length = 194916

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 20     atgaaccacaatcagcatcag 40
              |||||||||||||||||||||
Sbjct: 108313 atgaaccacaatcagcatcag 108333
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 314     tcaaggcggcggcgcggggcg 334
               |||||||||||||||||||||
Sbjct: 2226934 tcaaggcggcggcgcggggcg 2226914
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>dbj|AK133657.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330431B10 product:MAS-related
           GPR, member E, full insert sequence
          Length = 3761

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 962 gctccacccgcagcagcaggagcag 938
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>dbj|AK154886.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630110J04
           product:MAS-related GPR, member E, full insert sequence
          Length = 3550

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 755 gctccacccgcagcagcaggagcag 731
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>gb|AC158299.7| Mus musculus chromosome 7, clone RP24-271L24, complete sequence
          Length = 185347

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 284    gctccacccgcagcagcagtagcag 308
              ||||||||||||||||||| |||||
Sbjct: 155818 gctccacccgcagcagcaggagcag 155842
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>gb|AY042210.1| Mus musculus G protein-coupled receptor (MrgE) gene, complete cds
          Length = 1170

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 621 gctccacccgcagcagcaggagcag 597
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>gb|BC096766.1| Mus musculus MAS-related GPR, member E, mRNA (cDNA clone MGC:107418
           IMAGE:30102203), complete cds
          Length = 3567

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 756 gctccacccgcagcagcaggagcag 732
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>dbj|AK048528.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130069N09 product:G PROTEIN-COUPLED
           RECEPTOR, full insert sequence
          Length = 3575

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 778 gctccacccgcagcagcaggagcag 754
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 64       tctctcctcctctgttccgcc 84
                |||||||||||||||||||||
Sbjct: 22413399 tctctcctcctctgttccgcc 22413379
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>gb|AC026740.6| Homo sapiens chromosome 5 clone CTD-2589H19, complete sequence
          Length = 201464

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 451   gggagcaggagcgccggcttc 471
             |||||||||||||||||||||
Sbjct: 54092 gggagcaggagcgccggcttc 54112
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>gb|AC011545.4|AC011545 Homo sapiens chromosome 19, cosmid R30477 (LLNL-R_266D1), complete
             sequence
          Length = 38611

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 369   ggtcaggaaggaggccgaggctgag 393
             ||||||||||||||| |||||||||
Sbjct: 31865 ggtcaggaaggaggcagaggctgag 31889
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>emb|AJ311612.1|MMU311612 Mus musculus partial gene for NH3-dependent NAD+ synthetase-like
             protein, exons 1-10
          Length = 109996

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 284   gctccacccgcagcagcagtagcag 308
             ||||||||||||||||||| |||||
Sbjct: 44964 gctccacccgcagcagcaggagcag 44940
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>emb|AJ320231.1|MMU320231 Mus musculus domesticus partial mRNA for Ebrt3 protein
          Length = 3486

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 671 gctccacccgcagcagcaggagcag 647
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>dbj|AK098392.1| Homo sapiens cDNA FLJ25526 fis, clone CBR07215, highly similar to
            Homo sapiens mRNA for p25 alpha
          Length = 2043

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 451  gggagcaggagcgccggcttc 471
            |||||||||||||||||||||
Sbjct: 1922 gggagcaggagcgccggcttc 1902
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>ref|NM_175534.2| Mus musculus MAS-related GPR, member E (Mrgpre), mRNA
          Length = 3575

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 284 gctccacccgcagcagcagtagcag 308
           ||||||||||||||||||| |||||
Sbjct: 778 gctccacccgcagcagcaggagcag 754
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>gb|AC171313.5| Mus musculus chromosome 7, clone RP23-294D10, complete sequence
          Length = 208997

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 55     tcatcaaggtctctcctcctctgtt 79
              |||||||||||||| ||||||||||
Sbjct: 170881 tcatcaaggtctcttctcctctgtt 170905
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>dbj|AB017016.1| Homo sapiens mRNA for p25 alpha, complete cds
          Length = 5019

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 451  gggagcaggagcgccggcttc 471
            |||||||||||||||||||||
Sbjct: 1877 gggagcaggagcgccggcttc 1857
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>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 379    gaggccgaggctgagcaaga 398
              ||||||||||||||||||||
Sbjct: 358413 gaggccgaggctgagcaaga 358432
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>ref|XM_568431.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNM01180) partial mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 gaggccgaggctgagcaaga 398
           ||||||||||||||||||||
Sbjct: 695 gaggccgaggctgagcaaga 714
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>ref|XM_547220.2| PREDICTED: Canis familiaris similar to Axin-1 (Axis inhibition
            protein 1) (Fused protein), transcript variant 1
            (LOC490099), mRNA
          Length = 3020

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 286  tccacccgcagcagcagtagcagc 309
            ||||||||||||||||| ||||||
Sbjct: 2822 tccacccgcagcagcagcagcagc 2799
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>ref|XM_860399.1| PREDICTED: Canis familiaris similar to Axin-1 (Axis inhibition
            protein 1) (Fused protein), transcript variant 3
            (LOC490099), mRNA
          Length = 2930

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 286  tccacccgcagcagcagtagcagc 309
            ||||||||||||||||| ||||||
Sbjct: 2732 tccacccgcagcagcagcagcagc 2709
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>ref|XM_847228.1| PREDICTED: Canis familiaris similar to Axin-1 (Axis inhibition
            protein 1) (Fused protein), transcript variant 2
            (LOC490099), mRNA
          Length = 3035

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 286  tccacccgcagcagcagtagcagc 309
            ||||||||||||||||| ||||||
Sbjct: 2837 tccacccgcagcagcagcagcagc 2814
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>emb|AL512844.5| Human DNA sequence from clone RP11-90H3 on chromosome 1 Contains two
             matrin 3 (MATR3) pseudogenes, complete sequence
          Length = 159017

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   cccgcagcagcagtagcagc 309
             ||||||||||||||||||||
Sbjct: 47813 cccgcagcagcagtagcagc 47832
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>ref|XM_503946.1| Yarrowia lipolytica CLIB122, YALI0E14575g predicted mRNA
          Length = 2448

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 294  cagcagcagtagcagctcgt 313
            ||||||||||||||||||||
Sbjct: 2113 cagcagcagtagcagctcgt 2094
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>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence
          Length = 198781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   gtactctcaggggagcagga 460
             ||||||||||||||||||||
Sbjct: 91949 gtactctcaggggagcagga 91930
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    ctcgccggacacctcgtacc 226
              ||||||||||||||||||||
Sbjct: 318744 ctcgccggacacctcgtacc 318763
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ctcgccggacacctcgtacc 226
              ||||||||||||||||||||
Sbjct: 266160 ctcgccggacacctcgtacc 266141
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    ctcgccggacacctcgtacc 226
              ||||||||||||||||||||
Sbjct: 291903 ctcgccggacacctcgtacc 291884
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>emb|BX510364.11| Zebrafish DNA sequence from clone CH211-81A17 in linkage group 12,
             complete sequence
          Length = 120324

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ggtctctcctcctctgttcc 81
             ||||||||||||||||||||
Sbjct: 21237 ggtctctcctcctctgttcc 21218
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>gb|AC107871.10| Homo sapiens chromosome 15, clone RP11-315D16, complete sequence
          Length = 171605

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 486    ttcagggacaggcaaggagagtgg 509
              |||||||| |||||||||||||||
Sbjct: 162989 ttcagggaaaggcaaggagagtgg 163012
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>gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, complete sequence
          Length = 185596

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 486   ttcagggacaggcaaggagagtgg 509
             |||||||| |||||||||||||||
Sbjct: 32205 ttcagggaaaggcaaggagagtgg 32228
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 333     cgtcgccggcgtgttcggca 352
               ||||||||||||||||||||
Sbjct: 2180835 cgtcgccggcgtgttcggca 2180816
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>gb|U65510.1|RRU65510 Rhodospirillum rubrum alkyl hydroperoxide reductase (ahpC) gene,
            partial cds; CooM (cooM), CooK (cooK), CooL (cooL), CooX
            (cooX), CooU (cooU), CooH (cooH), iron sulfur protein
            (cooF), carbon monoxide dehydrogenase (cooS), CooC
            (cooC), CooT (cooT), CooJ (cooJ), putative
            transcriptional activator; similar to cAMP-receptor (CAP,
            CRP) protein: PIR Accession Number A26049; similar to fnr
            (nirR) gene product encoded by GenBank Accession Number
            J01608; aspartic acid-rich C-terminus similar to acidic
            region of HMG (high mobility group) protei (cooA), and
            nicotinate-nucleotide pyrophosphorylase (nadC) genes,
            complete cds; L-aspartate oxidase (nadB) gene, partial
            cds; and unknown gene
          Length = 16259

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  caaggcggcggcgcggggcg 334
            ||||||||||||||||||||
Sbjct: 1264 caaggcggcggcgcggggcg 1245
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>gb|AC156542.9| Mus musculus chromosome 1, clone RP23-370J16, complete sequence
          Length = 168193

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    catcaaggtctctcctcctc 75
             ||||||||||||||||||||
Sbjct: 64847 catcaaggtctctcctcctc 64866
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>gb|S82324.1| calcium/calmodulin-dependent protein kinase homolog|CaM kinase
           homolog|MCK1 [Zea mays=maize, cv. Merit, root caps,
           mRNA, 2483 nt]
          Length = 2483

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 aggcggcggcgcggggcgtcgccg 340
           |||||||||||| |||||||||||
Sbjct: 380 aggcggcggcgccgggcgtcgccg 357
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>gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, complete sequence
          Length = 173919

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   ttcagggacaggcaaggagagtgg 509
             |||||||| |||||||||||||||
Sbjct: 62313 ttcagggaaaggcaaggagagtgg 62290
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 315     caaggcggcggcgcggggcg 334
               ||||||||||||||||||||
Sbjct: 1677080 caaggcggcggcgcggggcg 1677061
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>gb|AC158317.1| Homo sapiens chromosome 19 clone WI2-1263I16, complete sequence
          Length = 35954

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   gccgaggctgagcaagaacc 401
             ||||||||||||||||||||
Sbjct: 33488 gccgaggctgagcaagaacc 33507
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>gb|AC112679.15| Mus musculus chromosome 1, clone RP23-199H14, complete sequence
          Length = 185805

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    catcaaggtctctcctcctc 75
             ||||||||||||||||||||
Sbjct: 10508 catcaaggtctctcctcctc 10527
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>gb|AC007827.5|AC007827 Drosophila melanogaster, chromosome 3R, region 98E-98E, BAC clone
              BACR10P23, complete sequence
          Length = 180946

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gcagcagtagcagctcgttc 315
              ||||||||||||||||||||
Sbjct: 115573 gcagcagtagcagctcgttc 115592
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>gb|AC018755.3|AC018755 Homo sapiens chromosome 19, BAC BC330783 (CIT-HSPC_470E3), complete
             sequence
          Length = 229155

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   gccgaggctgagcaagaacc 401
             ||||||||||||||||||||
Sbjct: 83987 gccgaggctgagcaagaacc 84006
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>dbj|AB078884.1| Coturnix japonica DNA, major histocompatibility complex region
          Length = 155564

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 282   gagctccacccgcagcagcagtagcagc 309
             |||| ||||| |||||||||||||||||
Sbjct: 22448 gagccccaccagcagcagcagtagcagc 22475
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 242     cctcgtcgcgcagcgccccg 261
               ||||||||||||||||||||
Sbjct: 1017444 cctcgtcgcgcagcgccccg 1017425
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>gb|AF147779.1|AF147779 Drosophila melanogaster Huntington disease protein homolog (Hsap\HD)
             gene, complete cds
          Length = 43125

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   gcagcagtagcagctcgttc 315
             ||||||||||||||||||||
Sbjct: 34462 gcagcagtagcagctcgttc 34481
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>gb|AE003766.2| Drosophila melanogaster chromosome 3R, section 104 of 118 of the complete
              sequence
          Length = 232302

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    gcagcagtagcagctcgttc 315
              ||||||||||||||||||||
Sbjct: 158500 gcagcagtagcagctcgttc 158519
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>dbj|AP003721.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-881M11, complete
             sequence
          Length = 201460

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   tgccccgggtcaggaaggag 381
             ||||||||||||||||||||
Sbjct: 31219 tgccccgggtcaggaaggag 31200
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>dbj|AP000777.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-804A23, complete
              sequence
          Length = 197856

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 362    tgccccgggtcaggaaggag 381
              ||||||||||||||||||||
Sbjct: 152646 tgccccgggtcaggaaggag 152627
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     gcggcggcgcggggcgtcgc 338
               ||||||||||||||||||||
Sbjct: 3363142 gcggcggcgcggggcgtcgc 3363123
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 322    gcggcgcggggcgtcgccggcgtg 345
              |||||||||||||||| |||||||
Sbjct: 763233 gcggcgcggggcgtcggcggcgtg 763210
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>gb|AC004126.1|AC004126 Human Chromosome 11q12.2 PAC clone pDJ606g6, complete sequence
          Length = 136328

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   tgccccgggtcaggaaggag 381
             ||||||||||||||||||||
Sbjct: 49518 tgccccgggtcaggaaggag 49537
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 294     cagcagcagtagcagctcgt 313
               ||||||||||||||||||||
Sbjct: 1742067 cagcagcagtagcagctcgt 1742048
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>gb|AC171684.1| Mus musculus BAC clone RP23-69D21 from chromosome 8, complete sequence
          Length = 255017

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    ggagggtactctcaggggag 455
              ||||||||||||||||||||
Sbjct: 106332 ggagggtactctcaggggag 106313
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>emb|AL158219.11| Human DNA sequence from clone RP5-876B19 on chromosome 11, complete
             sequence
          Length = 48412

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 438   agggtactctcaggggagcaggag 461
             ||||||||||| ||||||||||||
Sbjct: 35010 agggtactctctggggagcaggag 35033
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>emb|Y13993.1|MMY13993 Mus musculus mRNA for immunoglobulin VK domain of anti-viral
           haemorrhagic septicaemia virus, clone IP1H3
          Length = 333

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 492 gacaggcaaggagagtggag 511
           ||||||||||||||||||||
Sbjct: 39  gacaggcaaggagagtggag 20
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>gb|AC090692.9| Homo sapiens chromosome 11, clone RP11-698N11, complete sequence
          Length = 179494

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 438   agggtactctcaggggagcaggag 461
             ||||||||||| ||||||||||||
Sbjct: 71170 agggtactctctggggagcaggag 71147
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 333     cgtcgccggcgtgttcggca 352
               ||||||||||||||||||||
Sbjct: 2136196 cgtcgccggcgtgttcggca 2136215
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>dbj|D84507.1|MZECDPKA Zea mays mRNA for CDPK-related protein kinase, partial cds, clone
           ZmCRK1
          Length = 2140

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 317 aggcggcggcgcggggcgtcgccg 340
           |||||||||||| |||||||||||
Sbjct: 118 aggcggcggcgccgggcgtcgccg 95
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>dbj|AP002091.2| Homo sapiens genomic DNA, chromosome 6q25.2, clone: CITD-2058I12,
             complete sequence
          Length = 106763

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   cacctgcttcgtgccccggg 370
             ||||||||||||||||||||
Sbjct: 35116 cacctgcttcgtgccccggg 35097


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,454,649
Number of Sequences: 3902068
Number of extensions: 4454649
Number of successful extensions: 112416
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110904
Number of HSP's gapped (non-prelim): 1512
length of query: 553
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 530
effective length of database: 17,143,297,704
effective search space: 9085947783120
effective search space used: 9085947783120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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