ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart22g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188159.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1080 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 205 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 264 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 265 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 324 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 325 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 384 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 385 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 444 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 445 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 504 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 505 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 564 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 565 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 624 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 625 agaaccgcgccgcgctgacgcc 646
>ref|XM_506285.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0077F02.110 mRNA Length = 1092 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 191 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 250 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 251 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 310 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 311 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 370 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 371 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 430 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 431 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 490 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 491 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 550 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 551 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 610 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 611 agaaccgcgccgcgctgacgcc 632
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Minus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 12984857 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 12984798 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 12984797 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 12984738 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 12984737 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 12984678 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 12984677 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 12984618 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 12984617 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 12984558 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12984557 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 12984498 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 12984497 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 12984438 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 12984437 agaaccgcgccgcgctgacgcc 12984416
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Minus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 59154 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 59095 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 59094 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 59035 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 59034 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 58975 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 58974 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 58915 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 58914 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 58855 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 58854 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 58795 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 58794 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 58735 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 58734 agaaccgcgccgcgctgacgcc 58713
>dbj|AK120684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164D19, full insert sequence Length = 1040 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 201 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 260 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 261 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 320 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 321 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 380 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 381 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 440 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 441 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 500 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 501 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 560 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 561 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 620 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 621 agaaccgcgccgcgctgacgcc 642
>dbj|AK104173.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B12, full insert sequence Length = 966 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 65 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 124 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 125 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 184 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 185 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 244 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 245 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 304 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 305 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 364 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 365 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 424 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 425 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 484 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 485 agaaccgcgccgcgctgacgcc 506
>dbj|AK104124.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D05, full insert sequence Length = 1080 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 205 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 264 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 265 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 324 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 325 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 384 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 385 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 444 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 445 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 504 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 505 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 564 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 565 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 624 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 625 agaaccgcgccgcgctgacgcc 646
>dbj|AK061478.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G06, full insert sequence Length = 1092 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 191 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 250 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 251 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 310 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 311 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 370 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 371 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 430 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 431 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 490 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 491 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 550 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 551 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 610 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 611 agaaccgcgccgcgctgacgcc 632
>dbj|AK060411.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E03, full insert sequence Length = 954 Score = 591 bits (298), Expect = e-166 Identities = 406/442 (91%) Strand = Plus / Plus Query: 104 tccgcgtgtacgtgggctacgacttccgcgaggacatcgcataccgcgtgtgccggcgct 163 ||||||||| ||| || ||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 71 tccgcgtgttcgtcgggtacgactcgcgcgaggacatcgcgtaccgcgtgtgccggcgct 130 Query: 164 cactgctgcggcgctcctccgtgccgctggaggtcatcccgatcgtccagcaggagctcc 223 | ||||||| |||||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct: 131 ccctgctgcagcgctcctccgtgccggtggccgtgatcccgatcgtgcagcaggagctcc 190 Query: 224 gcgaggccgggctgtactggcgggagcgcgggccgacggagagcacggagttctccttca 283 | || |||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 191 ggtctgcggggctgtactggcgggagcgcgggcccacggagagcaccgagttctccttca 250 Query: 284 cccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctcttcgtggactgcg 343 |||||||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||| Sbjct: 251 cccgcttcctgacgccccacctggccggctaccgcggctgggcgctcttcgtcgactgcg 310 Query: 344 acttcctcttcgtggcggacgtggcggagctggcgcgcatggccgaccctcgctacgccg 403 ||||||||||||| || ||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 311 acttcctcttcgtcgccgacgtcgcggagctggcgcgcatggccgacccgcgctacgcgg 370 Query: 404 tgctctgcgtgcaccacgactacacgcccaaggaggccaccaagatggacggcgccgtgc 463 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 371 tgctgtgcgtgcaccacgactacgcgcccaaggaggccaccaagatggacggcgccgtgc 430 Query: 464 agacggcgtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccacccca 523 |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 431 agacggtgtacccgcgcaagaactggtcgtccatggtgctcttcaactgcgcccacccaa 490 Query: 524 agaaccgcgccgcgctcacgcc 545 |||||||||||||||| ||||| Sbjct: 491 agaaccgcgccgcgctgacgcc 512
>ref|NM_197354.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0076F20.4), mRNA Length = 1255 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Plus Query: 211 cagcaggagctccgcgaggccgggctgtactggcgggagcgcgggccgacggagagcacg 270 |||| ||| ||||||| ||| ||||| |||||||||||||| ||||| || |||||||| Sbjct: 246 cagccggatctccgcgcggcggggctctactggcgggagcgggggcccaccgagagcacc 305 Query: 271 gagttctccttcacccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctc 330 ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||| Sbjct: 306 gagttctccttcacccgcttcctcacaccctacctcgccggctaccgcggctgggcgctc 365 Query: 331 ttcgtggactgcgacttcctct 352 ||||| |||||||||||||||| Sbjct: 366 ttcgtcgactgcgacttcctct 387 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 436 gaggccaccaagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctcc 495 ||||| |||||||||||||||||| | ||||| | ||||||||||||||||||||| ||| Sbjct: 486 gaggcgaccaagatggacggcgccatccagaccgtgtacccgcgcaagaactggtcgtcc 545 Query: 496 atggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 546 atggtgctctacaactgcggccaccccaagaacgtcgccgcgctcac 592
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Minus Query: 211 cagcaggagctccgcgaggccgggctgtactggcgggagcgcgggccgacggagagcacg 270 |||| ||| ||||||| ||| ||||| |||||||||||||| ||||| || |||||||| Sbjct: 25410 cagccggatctccgcgcggcggggctctactggcgggagcgggggcccaccgagagcacc 25351 Query: 271 gagttctccttcacccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctc 330 ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||| Sbjct: 25350 gagttctccttcacccgcttcctcacaccctacctcgccggctaccgcggctgggcgctc 25291 Query: 331 ttcgtggactgcgacttcctct 352 ||||| |||||||||||||||| Sbjct: 25290 ttcgtcgactgcgacttcctct 25269 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Minus Query: 436 gaggccaccaagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctcc 495 ||||| |||||||||||||||||| | ||||| | ||||||||||||||||||||| ||| Sbjct: 25170 gaggcgaccaagatggacggcgccatccagaccgtgtacccgcgcaagaactggtcgtcc 25111 Query: 496 atggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 25110 atggtgctctacaactgcggccaccccaagaacgtcgccgcgctcac 25064
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Minus Query: 211 cagcaggagctccgcgaggccgggctgtactggcgggagcgcgggccgacggagagcacg 270 |||| ||| ||||||| ||| ||||| |||||||||||||| ||||| || |||||||| Sbjct: 19397544 cagccggatctccgcgcggcggggctctactggcgggagcgggggcccaccgagagcacc 19397485 Query: 271 gagttctccttcacccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctc 330 ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||| Sbjct: 19397484 gagttctccttcacccgcttcctcacaccctacctcgccggctaccgcggctgggcgctc 19397425 Query: 331 ttcgtggactgcgacttcctct 352 ||||| |||||||||||||||| Sbjct: 19397424 ttcgtcgactgcgacttcctct 19397403 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Minus Query: 436 gaggccaccaagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctcc 495 ||||| |||||||||||||||||| | ||||| | ||||||||||||||||||||| ||| Sbjct: 19397304 gaggcgaccaagatggacggcgccatccagaccgtgtacccgcgcaagaactggtcgtcc 19397245 Query: 496 atggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 19397244 atggtgctctacaactgcggccaccccaagaacgtcgccgcgctcac 19397198
>dbj|AK103655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135F01, full insert sequence Length = 1110 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Plus Query: 211 cagcaggagctccgcgaggccgggctgtactggcgggagcgcgggccgacggagagcacg 270 |||| ||| ||||||| ||| ||||| |||||||||||||| ||||| || |||||||| Sbjct: 257 cagccggatctccgcgcggcggggctctactggcgggagcgggggcccaccgagagcacc 316 Query: 271 gagttctccttcacccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctc 330 ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||| Sbjct: 317 gagttctccttcacccgcttcctcacaccctacctcgccggctaccgcggctgggcgctc 376 Query: 331 ttcgtggactgcgacttcctct 352 ||||| |||||||||||||||| Sbjct: 377 ttcgtcgactgcgacttcctct 398 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 436 gaggccaccaagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctcc 495 ||||| |||||||||||||||||| | ||||| | ||||||||||||||||||||| ||| Sbjct: 497 gaggcgaccaagatggacggcgccatccagaccgtgtacccgcgcaagaactggtcgtcc 556 Query: 496 atggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 557 atggtgctctacaactgcggccaccccaagaacgtcgccgcgctcac 603
>dbj|AK059344.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-B09, full insert sequence Length = 1035 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Plus Query: 211 cagcaggagctccgcgaggccgggctgtactggcgggagcgcgggccgacggagagcacg 270 |||| ||| ||||||| ||| ||||| |||||||||||||| ||||| || |||||||| Sbjct: 188 cagccggatctccgcgcggcggggctctactggcgggagcgggggcccaccgagagcacc 247 Query: 271 gagttctccttcacccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctc 330 ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||| Sbjct: 248 gagttctccttcacccgcttcctcacaccctacctcgccggctaccgcggctgggcgctc 307 Query: 331 ttcgtggactgcgacttcctct 352 ||||| |||||||||||||||| Sbjct: 308 ttcgtcgactgcgacttcctct 329 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 436 gaggccaccaagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctcc 495 ||||| |||||||||||||||||| | ||||| | ||||||||||||||||||||| ||| Sbjct: 428 gaggcgaccaagatggacggcgccatccagaccgtgtacccgcgcaagaactggtcgtcc 487 Query: 496 atggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 488 atggtgctctacaactgcggccaccccaagaacgtcgccgcgctcac 534
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 163 bits (82), Expect = 7e-37 Identities = 127/142 (89%) Strand = Plus / Minus Query: 211 cagcaggagctccgcgaggccgggctgtactggcgggagcgcgggccgacggagagcacg 270 |||| ||| ||||||| ||| ||||| |||||||||||||| ||||| || |||||||| Sbjct: 19408820 cagccggatctccgcgcggcggggctctactggcgggagcgggggcccaccgagagcacc 19408761 Query: 271 gagttctccttcacccgcttcctgacgccacacctcgccggctaccgcgggtgggcgctc 330 ||||||||||||||||||||||| || || ||||||||||||||||||| ||||||||| Sbjct: 19408760 gagttctccttcacccgcttcctcacaccctacctcgccggctaccgcggctgggcgctc 19408701 Query: 331 ttcgtggactgcgacttcctct 352 ||||| |||||||||||||||| Sbjct: 19408700 ttcgtcgactgcgacttcctct 19408679 Score = 141 bits (71), Expect = 3e-30 Identities = 98/107 (91%) Strand = Plus / Minus Query: 436 gaggccaccaagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctcc 495 ||||| |||||||||||||||||| | ||||| | ||||||||||||||||||||| ||| Sbjct: 19408580 gaggcgaccaagatggacggcgccatccagaccgtgtacccgcgcaagaactggtcgtcc 19408521 Query: 496 atggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 19408520 atggtgctctacaactgcggccaccccaagaacgtcgccgcgctcac 19408474
>gb|AY553364.1| Elaeis oleifera unknown mRNA, partial sequence Length = 280 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 444 caagatggacggcgccgtgcagacggcgtacccgcgcaagaactggtcctccatggtgct 503 |||||||||||||| || ||||| | || ||| ||||||||||||||||| ||||| || Sbjct: 13 caagatggacggcgtggtccagaccgtgttccctcgcaagaactggtcctcgatggtcct 72 Query: 504 cttcaactgcggccaccccaagaaccg 530 || ||||||||| |||||||||||||| Sbjct: 73 ctacaactgcgggcaccccaagaaccg 99
>gb|AY111750.1| Zea mays CL10536_1 mRNA sequence Length = 666 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 484 aactggtcctccatggtgctcttcaactgcggccaccccaagaaccgcgccgcgctcac 542 |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct: 666 aactggtcctccatggtgctctacaactgcggccaccccaagaacgtggccgcgctcac 608
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 cgcgtccgcgccgaaaatgtcgc 46 ||||||||||||||||||||||| Sbjct: 2981916 cgcgtccgcgccgaaaatgtcgc 2981938
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 cgcgtccgcgccgaaaatgtcgc 46 ||||||||||||||||||||||| Sbjct: 109358 cgcgtccgcgccgaaaatgtcgc 109380
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 24 cgcgtccgcgccgaaaatgtcgc 46 ||||||||||||||||||||||| Sbjct: 3954899 cgcgtccgcgccgaaaatgtcgc 3954921
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 263 agagcacggagttctccttcacccgcttcct 293 ||||||||| |||||||||||||||||||| Sbjct: 183635 agagcacggccttctccttcacccgcttcct 183665
>ref|NM_105172.2| Arabidopsis thaliana unknown protein AT1G64980 mRNA, complete cds Length = 1220 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 471 gtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccaccccaagaac 528 ||||||| | ||||||||||| || |||||||| | |||||| || ||||| |||||| Sbjct: 552 gtacccgaggaagaactggtcttcaatggtgctttacaactgtggacaccctaagaac 609
>gb|BT010414.1| Arabidopsis thaliana At1g64980 mRNA, complete cds Length = 780 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 471 gtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccaccccaagaac 528 ||||||| | ||||||||||| || |||||||| | |||||| || ||||| |||||| Sbjct: 435 gtacccgaggaagaactggtcttcaatggtgctttacaactgtggacaccctaagaac 492
>gb|AY301981.1| Agrotis ipsilon antennal binding protein X-1 mRNA, partial cds Length = 482 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 360 ggacgtggcggagctggcgcgcatgg 385 |||| ||||||||||||||||||||| Sbjct: 18 ggacatggcggagctggcgcgcatgg 43
>emb|BX813462.1|CNS0AEJR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 881 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 471 gtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccaccccaagaac 528 ||||||| | ||||||||||| || |||||||| | |||||| || ||||| |||||| Sbjct: 251 gtacccgaggaagaactggtcttcaatggtgctttacaactgtggacaccctaagaac 308
>gb|AC006193.3|AC006193 Arabidopsis thaliana chromosome I BAC F13O11 genomic sequence, complete sequence Length = 118335 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Minus Query: 471 gtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccaccccaagaac 528 ||||||| | ||||||||||| || |||||||| | |||||| || ||||| |||||| Sbjct: 101606 gtacccgaggaagaactggtcttcaatggtgctttacaactgtggacaccctaagaac 101549
>dbj|AK176271.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-17-M06 Length = 1205 Score = 44.1 bits (22), Expect = 0.47 Identities = 49/58 (84%) Strand = Plus / Plus Query: 471 gtacccgcgcaagaactggtcctccatggtgctcttcaactgcggccaccccaagaac 528 ||||||| | ||||||||||| || |||||||| | |||||| || ||||| |||||| Sbjct: 567 gtacccgaggaagaactggtcttcaatggtgctttacaactgtggacaccctaagaac 624
>emb|AJ002518.1|HVAJ2518 Heliothis virescens mRNA for antennal binding protein X Length = 450 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 360 ggacgtggcggagctggcgcgcatgg 385 |||| ||||||||||||||||||||| Sbjct: 82 ggacatggcggagctggcgcgcatgg 107
>ref|NM_180666.2| Arabidopsis thaliana calcium ion binding AT3G10300 transcript variant AT3G10300.1 mRNA, complete cds Length = 1055 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 496 actgctgcggcgctcctccgt 476 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 457 actgctgcggcgctcctccgt 437
>ref|NM_111865.4| Arabidopsis thaliana calcium ion binding AT3G10300 transcript variant AT3G10300.3 mRNA, complete cds Length = 1258 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 515 actgctgcggcgctcctccgt 495 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 476 actgctgcggcgctcctccgt 456
>ref|NM_180667.2| Arabidopsis thaliana calcium ion binding AT3G10300 transcript variant AT3G10300.2 mRNA, complete cds Length = 1471 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 515 actgctgcggcgctcctccgt 495 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 476 actgctgcggcgctcctccgt 456
>ref|NM_001035591.1| Arabidopsis thaliana calcium ion binding AT3G10300 transcript variant AT3G10300.4 mRNA, complete cds Length = 1272 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 515 actgctgcggcgctcctccgt 495 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 476 actgctgcggcgctcctccgt 456
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 197 tcatcccgatcgtccagcagg 217 ||||||||||||||||||||| Sbjct: 804847 tcatcccgatcgtccagcagg 804827
>gb|BT015172.1| Arabidopsis thaliana At3g10300 gene, complete cds Length = 1008 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 400 actgctgcggcgctcctccgt 380 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 361 actgctgcggcgctcctccgt 341
>gb|AC146613.3| Mus musculus BAC clone RP23-36P1 from chromosome 18, complete sequence Length = 197939 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 501 gctcttcaactgcggccaccc 521 ||||||||||||||||||||| Sbjct: 70659 gctcttcaactgcggccaccc 70679
>gb|AC009400.4|ATAC009400 Arabidopsis thaliana chromosome III BAC F14P13 genomic sequence, complete sequence Length = 87937 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 43970 actgctgcggcgctcctccgt 43990 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 43931 actgctgcggcgctcctccgt 43951
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 428 cgcccaaggaggccaccaaga 448 ||||||||||||||||||||| Sbjct: 95749 cgcccaaggaggccaccaaga 95729
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 428 cgcccaaggaggccaccaaga 448 ||||||||||||||||||||| Sbjct: 142001 cgcccaaggaggccaccaaga 142021
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 114 cgtgggctacgacttccgcgaggac 138 ||||||||||||| ||||||||||| Sbjct: 192638 cgtgggctacgacgtccgcgaggac 192662
>gb|AE012538.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 446 of 460 of the complete genome Length = 10676 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gccgaaaatgtcgcctccggc 53 ||||||||||||||||||||| Sbjct: 2920 gccgaaaatgtcgcctccggc 2900
>gb|AY062498.1| Arabidopsis thaliana Unknown protein (At3g10300; F14P13.10) mRNA, complete cds Length = 1196 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 458 actgctgcggcgctcctccgt 438 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 actgctgcggcgctcctccgt 185 ||||||||||||||||||||| Sbjct: 419 actgctgcggcgctcctccgt 399
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 gccgaaaatgtcgcctccggc 53 ||||||||||||||||||||| Sbjct: 4995652 gccgaaaatgtcgcctccggc 4995632
>gb|AY106704.1| Zea mays PCO100617 mRNA sequence Length = 870 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 ggagctggcgcgcatggccga 389 ||||||||||||||||||||| Sbjct: 131 ggagctggcgcgcatggccga 151
>gb|AF095748.1|AF095748 Burkholderia cepacia principal sigma factor (sigA), phthalate dioxygenase reductase (ophA1), putative phthalate permease N-terminal region, putative phathalate permease C-terminal region (ophD), 4,5-dihydroxyphthalate decarboxylase (ophC), phthalate-inducible quinolinate phosphoribosyl transferase (ophE), transposase (tnp), phthalate dihydrodiol dehydrogenase (ophB), and phthalate dioxygenase (ophA2) genes, complete cds; and unknown gene Length = 13610 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 358 gcggacgtggcggagctggcg 378 ||||||||||||||||||||| Sbjct: 11158 gcggacgtggcggagctggcg 11138
>gb|M90554.1|MZEEMBIV Corn late embryogenesis-abundant protein (EMB5) mRNA, complete cds Length = 430 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 ggagctggcgcgcatggccga 389 ||||||||||||||||||||| Sbjct: 55 ggagctggcgcgcatggccga 75
>gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete sequence Length = 192157 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 172613 tggcggacgtggcggagctg 172594
>ref|XM_510282.1| PREDICTED: Pan troglodytes similar to Fascin (Singed-like protein) (55 kDa actin bundling protein) (p55) (LOC453303), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caaggaggccaccaagatggacgg 455 ||||||||||| |||||||||||| Sbjct: 922 caaggaggccatcaagatggacgg 945
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 tggcggagctggcgcgcatg 384 |||||||||||||||||||| Sbjct: 3889830 tggcggagctggcgcgcatg 3889811
>ref|XM_423769.1| PREDICTED: Gallus gallus similar to CG8947-PA (LOC426093), partial mRNA Length = 1966 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ccaagaaccgcgccgcgctc 540 |||||||||||||||||||| Sbjct: 980 ccaagaaccgcgccgcgctc 999 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 521 ccaagaaccgcgccgcgctc 540 |||||||||||||||||||| Sbjct: 452 ccaagaaccgcgccgcgctc 471
>ref|NM_198020.1| Mus musculus TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae) (Trmt1), mRNA Length = 2149 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccgcgggtgggcgctcttcg 334 |||||||||||||||||||| Sbjct: 276 ccgcgggtgggcgctcttcg 257
>ref|XM_755142.1| Ustilago maydis 521 hypothetical protein (UM04088.1) partial mRNA Length = 1131 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 gtggactgcgacttcctctt 353 |||||||||||||||||||| Sbjct: 604 gtggactgcgacttcctctt 623
>gb|AC106820.4| Homo sapiens chromosome 16 clone RP11-715J22, complete sequence Length = 176552 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ctccttcacccgcttcctga 295 |||||||||||||||||||| Sbjct: 75818 ctccttcacccgcttcctga 75799
>emb|X58868.1|HEPVGH Pseudorabies virus glycoprotein H gene Length = 3422 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 gcgctcctccgtgccgctggaggtcatc 201 |||||||| | ||||||||||||||||| Sbjct: 793 gcgctccttcctgccgctggaggtcatc 820
>gb|AY044230.1| Homo sapiens processed fascin pseudogene, partial sequence Length = 3436 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caaggaggccaccaagatggacgg 455 ||||||||||| |||||||||||| Sbjct: 1814 caaggaggccatcaagatggacgg 1837
>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 10/10 Length = 140057 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccggcaccatgccagctcct 68 |||||||||||||||||||| Sbjct: 8877 ccggcaccatgccagctcct 8858
>emb|AJ238947.1|DME238947 Drosophila melanogaster mRNA for Hrb57A ribonucleoprotein Length = 2040 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 880 tggcggacgtggcggagctg 899
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cgaggccgggctgtactggc 244 |||||||||||||||||||| Sbjct: 5082471 cgaggccgggctgtactggc 5082452
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 gaggtcatcccgatcgtcca 212 |||||||||||||||||||| Sbjct: 245603 gaggtcatcccgatcgtcca 245622
>ref|NM_206185.1| Drosophila melanogaster bancal CG13425-RA, transcript variant A (bl), mRNA Length = 2122 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 962 tggcggacgtggcggagctg 981
>ref|NM_206184.1| Drosophila melanogaster bancal CG13425-RC, transcript variant C (bl), mRNA Length = 2173 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 1013 tggcggacgtggcggagctg 1032
>ref|NM_206183.1| Drosophila melanogaster bancal CG13425-RD, transcript variant D (bl), mRNA Length = 1352 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 507 tggcggacgtggcggagctg 526
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 caggagctccgcgaggccgg 233 |||||||||||||||||||| Sbjct: 1928312 caggagctccgcgaggccgg 1928293
>ref|NM_145883.2| Drosophila melanogaster bancal CG13425-RB, transcript variant B (bl), mRNA Length = 2129 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 969 tggcggacgtggcggagctg 988
>gb|AY069684.1| Drosophila melanogaster LD45549 full length cDNA Length = 1252 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 31 tggcggacgtggcggagctg 50
>dbj|AK155251.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630211P03 product:similar to N2,N2-dimethylguanosine tRNA methyltransferase [Homo sapiens], full insert sequence Length = 2131 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccgcgggtgggcgctcttcg 334 |||||||||||||||||||| Sbjct: 272 ccgcgggtgggcgctcttcg 253
>dbj|AK171002.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630217D09 product:similar to N2,N2-dimethylguanosine tRNA methyltransferase [Homo sapiens], full insert sequence Length = 2130 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccgcgggtgggcgctcttcg 334 |||||||||||||||||||| Sbjct: 272 ccgcgggtgggcgctcttcg 253
>gb|AC027139.5|AC027139 Homo sapiens, clone RP11-1H8, complete sequence Length = 151498 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caaggaggccaccaagatggacgg 455 ||||||||||| |||||||||||| Sbjct: 56857 caaggaggccatcaagatggacgg 56880
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 gcgctcctccgtgccgctggaggtcatc 201 |||||||| | ||||||||||||||||| Sbjct: 61137 gcgctccttcctgccgctggaggtcatc 61164
>ref|NG_002332.1| Homo sapiens fascin pseudogene (LOC145989) on chromosome 15 Length = 3436 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 caaggaggccaccaagatggacgg 455 ||||||||||| |||||||||||| Sbjct: 1814 caaggaggccatcaagatggacgg 1837
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcaggagctccgcgaggccg 232 |||||||||||||||||||| Sbjct: 13993881 gcaggagctccgcgaggccg 13993900
>gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone BACR33D17, complete sequence Length = 156753 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 48081 tggcggacgtggcggagctg 48100
>gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, region 57B2-B3, BAC clone BACR04I07, complete sequence Length = 123647 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 14975 tggcggacgtggcggagctg 14994
>gb|AF275629.1|AF275629 Drosophila melanogaster bancal protein mRNA, complete cds Length = 2028 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 871 tggcggacgtggcggagctg 890
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccggcaccatgccagctcct 68 |||||||||||||||||||| Sbjct: 3178222 ccggcaccatgccagctcct 3178203
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 433 aaggaggccaccaagatggacggcgccg 460 ||||||||| || ||||||||||||||| Sbjct: 3910062 aaggaggccgccgagatggacggcgccg 3910035
>dbj|AP005688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031J07 Length = 172511 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcaggagctccgcgaggccg 232 |||||||||||||||||||| Sbjct: 111101 gcaggagctccgcgaggccg 111120
>emb|X61696.1|PRVGHG Pseudorabies virus gH gene for glycoprotein H Length = 2484 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 gcgctcctccgtgccgctggaggtcatc 201 |||||||| | ||||||||||||||||| Sbjct: 721 gcgctccttcctgccgctggaggtcatc 748
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ctggcgcgcatggccgaccc 392 |||||||||||||||||||| Sbjct: 1899569 ctggcgcgcatggccgaccc 1899550
>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete sequence Length = 263535 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 90923 tggcggacgtggcggagctg 90942
>gb|BT001672.1| Drosophila melanogaster RE50346 full insert cDNA Length = 1352 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tggcggacgtggcggagctg 375 |||||||||||||||||||| Sbjct: 507 tggcggacgtggcggagctg 526
>gb|BC027404.1| Mus musculus TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae), mRNA (cDNA clone MGC:37065 IMAGE:4950980), complete cds Length = 2149 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 ccgcgggtgggcgctcttcg 334 |||||||||||||||||||| Sbjct: 276 ccgcgggtgggcgctcttcg 257
>gb|M61196.1|SH1GPGH Pseudorabies virus glycoprotein gH (gH) gene, complete cds Length = 3249 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 174 gcgctcctccgtgccgctggaggtcatc 201 |||||||| | ||||||||||||||||| Sbjct: 648 gcgctccttcctgccgctggaggtcatc 675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,612,172 Number of Sequences: 3902068 Number of extensions: 2612172 Number of successful extensions: 50757 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49845 Number of HSP's gapped (non-prelim): 903 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
