ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22g03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 533 bits (269), Expect = e-148 Identities = 392/433 (90%) Strand = Plus / Plus Query: 165 aggttcaacaccgacggcaccgtccgcaccggatacgacgcctcgggccagcaggtggtt 224 ||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 180 aggttcaccacggacggcaccgtccgcacgggatacgacgattcgggccagcaggtggtg 239 Query: 225 atgctcaacctcaaccagcaatccggcgccgccggattcaactccaagcagcagtacctc 284 |||||| |||| ||||||| |||||||| ||||| |||||||||||| |||||||||| Sbjct: 240 atgctccgcctcgaccagcactccggcgctgccggcttcaactccaaggagcagtacctt 299 Query: 285 tacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcc 344 ||||||||||||||| || ||||||||||||||| ||| |||||||||||||||||||| Sbjct: 300 tacggcgagttcagcgtcgagatgaagctcatccgggggaactccgccggcaccgtctcg 359 Query: 345 tgcttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaag 404 ||||||||||| |||||||| |||| ||| ||||||||||||||||||||||||||| | Sbjct: 360 tgcttctacctctcttccggcgacggcgacgggcgcgacgagatcgacatggagttcatg 419 Query: 405 ggcaactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggc 464 |||||||| ||||| || ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 420 ggcaactcgagcgggcagccggtggtgctgaacaccaacgtgtgggccagcggcgacggc 479 Query: 465 aagaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacacc 524 ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 480 aagaaggagcaccagttcgacctctggttcgacccctccgccgactaccacacctacacc 539 Query: 525 atcatctggaacccggagaacatcctcttcaaggtggacaacctcttcatccgatccttc 584 ||||||||||||||| |||||||| |||||||| ||| ||||||||||||| |||||| Sbjct: 540 atcatctggaacccgaccaacatcctgttcaaggtcgacgacctcttcatccgctccttc 599 Query: 585 aagcgcttcgccg 597 ||||||| ||||| Sbjct: 600 aagcgctacgccg 612
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 387 bits (195), Expect = e-104 Identities = 349/397 (87%), Gaps = 5/397 (1%) Strand = Plus / Plus Query: 168 ttcaacaccgacggcaccgtccgcaccggatacgacgcctcgggccagcaggtggttatg 227 |||||||| |||||||||||||||||| |||||||| ||||| ||| |||||| ||| Sbjct: 215 ttcaacacggacggcaccgtccgcacccagtacgacgcgtcggggcaggaggtggcgatg 274 Query: 228 ctcaacctcaaccagca-atccggcgccgccggattcaactccaagcagcagtacctcta 286 |||| ||| ||| ||| || |||| |||| |||||||||||| |||||||||| || Sbjct: 275 ctcagcctggacc-gcagctctggcg---ccggcttcaactccaaggagcagtacctgta 330 Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 331 cggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcaccgtctcgtg 390 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || || || |||| ||| ||| ||||||||||||||||||||||| ||| Sbjct: 391 cttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatggagttcatggg 450 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| | ||||| || ||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 451 caacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaa 510 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 511 gaaggagcaccagttcgacctctggttcgacccctccgccgactaccacacctacaccat 570 Query: 527 catctggaacccggagaacatcctcttcaaggtggac 563 |||||||||||||| |||||||| |||||||||||| Sbjct: 571 catctggaacccggccaacatcctgttcaaggtggac 607
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 379 bits (191), Expect = e-102 Identities = 348/397 (87%), Gaps = 5/397 (1%) Strand = Plus / Plus Query: 168 ttcaacaccgacggcaccgtccgcaccggatacgacgcctcgggccagcaggtggttatg 227 |||||||| |||||||||||||||||| |||||||| ||||| ||| |||||| ||| Sbjct: 190 ttcaacacggacggcaccgtccgcacccagtacgacgcgtcggggcaggaggtggcgatg 249 Query: 228 ctcaacctcaaccagca-atccggcgccgccggattcaactccaagcagcagtacctcta 286 |||| ||| ||| ||| || |||| |||| |||||||||||| |||||||||| || Sbjct: 250 ctcagcctggacc-gcagctctggcg---ccggcttcaactccaaggagcagtacctgta 305 Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| || Sbjct: 306 cggcgagttcagcgtccagatgaagctcatccccggcaactccgccggcaccgtctcgtg 365 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || || || |||| ||| ||| ||||||||||||||||||||||| ||| Sbjct: 366 cttctacctctcgtcgggcgacggcgacgggcacgacgagatcgacatggagttcatggg 425 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| | ||||| || ||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 426 caacgcgagcgggcagccggtggtgctgaacacgaacgtgtgggccagcggcgacggcaa 485 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 486 gaaggagcaccagttcgacctctggttcgacccctccgccgactaccacacctacaccat 545 Query: 527 catctggaacccggagaacatcctcttcaaggtggac 563 ||||||||||||| |||||||| |||||||||||| Sbjct: 546 catctggaacccgaccaacatcctgttcaaggtggac 582
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 289 bits (146), Expect = 5e-75 Identities = 275/318 (86%) Strand = Plus / Plus Query: 272 gcagcagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgc 331 |||| ||||||| ||||| ||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 330 gcagaagtacctgtacggggagttcagcatccagatgaggctgatcccgggcaactccgc 389 Query: 332 cggcaccgtctcctgcttctacctttcttccggtgacgacgagtggcgcgacgagatcga 391 |||||||| ||| ||||||||| || || || |||| ||| |||||||||||| Sbjct: 390 gggcaccgtgacctccttctacctgtcgtcgggcgacgggcccgggcacgacgagatcga 449 Query: 392 catggagttcaagggcaactccagcggccacccggtggtgctcaacaccaacgtgtgggc 451 ||||||||||| ||||||| ||||||| || || |||||||| ||||||||||||||||| Sbjct: 450 catggagttcatgggcaacgccagcgggcagcccgtggtgctgaacaccaacgtgtgggc 509 Query: 452 caacggcgacggcaagaaggagcaccagttcgacctctggttcgacccagccgcagacta 511 ||||||||||||||||||||||||||||||| |||| ||||||||||| ||||| |||| Sbjct: 510 caacggcgacggcaagaaggagcaccagttctacctgtggttcgacccggccgccgactt 569 Query: 512 ccacacctacaccatcatctggaacccggagaacatcctcttcaaggtggacaacctctt 571 ||||||||||||||||||||||||| ||||| || |||||||||||||| ||||||| Sbjct: 570 ccacacctacaccatcatctggaacgacaagaacgtcatcttcaaggtggacgacctctt 629 Query: 572 catccgatccttcaagcg 589 | | || | ||||||||| Sbjct: 630 cgtgcggtgcttcaagcg 647
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 246 bits (124), Expect = 7e-62 Identities = 262/308 (85%) Strand = Plus / Plus Query: 256 ccggattcaactccaagcagcagtacctctacggcgagttcagcatccagatgaagctca 315 |||| |||| ||||||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 232 ccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaagctca 291 Query: 316 tcccgggaaactccgccggcaccgtctcctgcttctacctttcttccggtgacgacgagt 375 || || |||||||||||||||||| ||| ||||||||| | ||||| || | ||| Sbjct: 292 tcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacg 351 Query: 376 ggcgcgacgagatcgacatggagttcaagggcaactccagcggccacccggtggtgctca 435 ||| ||||||||||||||| ||||||| ||||||| ||||||| |||| ||| | | Sbjct: 352 ggcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatga 411 Query: 436 acaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcg 495 |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 412 acaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttcg 471 Query: 496 acccagccgcagactaccacacctacaccatcatctggaacccggagaacatcctcttca 555 |||| |||| |||| ||||||||||| ||| |||||||||| |||||||| | ||| Sbjct: 472 accccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatcatattcc 531 Query: 556 aggtggac 563 |||||||| Sbjct: 532 aggtggac 539
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 246 bits (124), Expect = 7e-62 Identities = 262/308 (85%) Strand = Plus / Plus Query: 256 ccggattcaactccaagcagcagtacctctacggcgagttcagcatccagatgaagctca 315 |||| |||| ||||||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 232 ccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaagctca 291 Query: 316 tcccgggaaactccgccggcaccgtctcctgcttctacctttcttccggtgacgacgagt 375 || || |||||||||||||||||| ||| ||||||||| | ||||| || | ||| Sbjct: 292 tcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacg 351 Query: 376 ggcgcgacgagatcgacatggagttcaagggcaactccagcggccacccggtggtgctca 435 ||| ||||||||||||||| ||||||| ||||||| ||||||| |||| ||| | | Sbjct: 352 ggcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctatgtgatga 411 Query: 436 acaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcg 495 |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 412 acaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttcg 471 Query: 496 acccagccgcagactaccacacctacaccatcatctggaacccggagaacatcctcttca 555 |||| |||| |||| ||||||||||| ||| |||||||||| |||||||| | ||| Sbjct: 472 accccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatcatattcc 531 Query: 556 aggtggac 563 |||||||| Sbjct: 532 aggtggac 539
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 214 bits (108), Expect = 3e-52 Identities = 258/308 (83%) Strand = Plus / Plus Query: 256 ccggattcaactccaagcagcagtacctctacggcgagttcagcatccagatgaagctca 315 |||| |||| ||||||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 243 ccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaagctca 302 Query: 316 tcccgggaaactccgccggcaccgtctcctgcttctacctttcttccggtgacgacgagt 375 || || |||||||||||||||||| ||| ||||||||| | || || || | ||| Sbjct: 303 tcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacg 362 Query: 376 ggcgcgacgagatcgacatggagttcaagggcaactccagcggccacccggtggtgctca 435 | | |||||||||||||| ||||||| ||||||| ||||||| |||| ||| | | Sbjct: 363 gccatgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatga 422 Query: 436 acaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcg 495 |||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct: 423 acaccaacgtctgggccagcggcgacggcaagaaggagcaccagttctacctctggttcg 482 Query: 496 acccagccgcagactaccacacctacaccatcatctggaacccggagaacatcctcttca 555 |||| |||| |||| ||||||||||| ||| |||||||||| |||||||| | ||| Sbjct: 483 accccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatcatattcc 542 Query: 556 aggtggac 563 |||||||| Sbjct: 543 aggtggac 550
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 200 bits (101), Expect = 4e-48 Identities = 245/293 (83%) Strand = Plus / Plus Query: 256 ccggattcaactccaagcagcagtacctctacggcgagttcagcatccagatgaagctca 315 |||| |||| ||||||| | ||||||||||||||||||||||| ||||||||||||||| Sbjct: 231 ccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaagctca 290 Query: 316 tcccgggaaactccgccggcaccgtctcctgcttctacctttcttccggtgacgacgagt 375 || || |||||||||||||||||| ||| ||||||||| | || || || | ||| Sbjct: 291 tcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggagggcgacg 350 Query: 376 ggcgcgacgagatcgacatggagttcaagggcaactccagcggccacccggtggtgctca 435 | | |||||||||||||| ||||||| ||||||| ||||||| |||| ||| | | Sbjct: 351 gccatgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgtgatga 410 Query: 436 acaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcg 495 ||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 411 acaccaacgtgtgggccggcggcgacgggaagaaggagcaccagttctacctctggttcg 470 Query: 496 acccagccgcagactaccacacctacaccatcatctggaacccggagaacatc 548 |||| |||| |||| ||||||||||| ||| |||||||||| |||||||| Sbjct: 471 accccaccgccgacttccacacctacaagatcgtctggaaccccaagaacatc 523
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 196 bits (99), Expect = 6e-47 Identities = 240/287 (83%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| ||||||||||||| | ||||||||||| || || |||||||| || | Sbjct: 152 agtacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctggga 211 Query: 337 ccgtctcctgcttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatgg 396 | ||| ||| ||||||||| | ||||| || | ||| || ||||||||||||||||| Sbjct: 212 ctgtcacctccttctacctgacgtccggcgagggcgacgagcacgacgagatcgacatgg 271 Query: 397 agttcaagggcaactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacg 456 |||||| |||||||||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 272 agttcatgggcaactccagcggctccccgacggtgctcaacacgaacgtgtgggccaacg 331 Query: 457 gcgacggcaagaaggagcaccagttcgacctctggttcgacccagccgcagactaccaca 516 |||||||||| ||||||||||||||| |||| ||||||||||| ||||| |||| ||||| Sbjct: 332 gcgacggcaataaggagcaccagttctacctgtggttcgacccggccgccgacttccaca 391 Query: 517 cctacaccatcatctggaacccggagaacatcctcttcaaggtggac 563 |||| ||| |||||||| |||||||| ||||| |||||||| Sbjct: 392 aatacaagatcgtctggaacgacaagaacatcatcttccaggtggac 438
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 192 bits (97), Expect = 9e-46 Identities = 163/185 (88%) Strand = Plus / Plus Query: 379 gcgacgagatcgacatggagttcaagggcaactccagcggccacccggtggtgctcaaca 438 |||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| Sbjct: 418 gcgacgagatcgacatggagttcatgggcaactccagcggctccccgacggtgctcaaca 477 Query: 439 ccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcgacc 498 | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 478 cgaacgtgtgggccaacggcgacggcaagaaggagcaccagttctacctgtggttcgacc 537 Query: 499 cagccgcagactaccacacctacaccatcatctggaacccggagaacatcctcttcaagg 558 | ||||| |||| ||||| |||| ||| |||||||| |||||||| ||||| ||| Sbjct: 538 cggccgccgacttccacaaatacaagatcgtctggaacgacaagaacatcatcttccagg 597 Query: 559 tggac 563 ||||| Sbjct: 598 tggac 602 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| ||||||||||||| | ||||||||||| || || |||||||| || | Sbjct: 325 agtacctcttcggcgagttcagcgtggagatgaagctcgtcggcggcaactccgctggga 384 Query: 337 ccgtctcctgcttctacct 355 | ||| ||| ||||||||| Sbjct: 385 ctgtcacctccttctacct 403
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 188 bits (95), Expect = 1e-44 Identities = 236/283 (83%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||||||||| || ||||||||||| || || ||||||||||||| Sbjct: 249 agtacctcttcggcgagttcgaggtcaagatgaagctcgtcgacggcaactccgccggca 308 Query: 337 ccgtctcctgcttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatgg 396 | ||| ||| ||||||||| ||||||| || || | | ||||||||||||||| | Sbjct: 309 cagtcacctccttctacctgacttccggcgagagcgcgacccacgacgagatcgacatcg 368 Query: 397 agttcaagggcaactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacg 456 |||||| |||||||||||||||| |||| ||| | ||||||||||||||||||| || Sbjct: 369 agttcatgggcaactccagcggcgacccctacgtgatgaacaccaacgtgtgggccagcg 428 Query: 457 gcgacggcaagaaggagcaccagttcgacctctggttcgacccagccgcagactaccaca 516 |||||||||||||||||||||||||| |||||||||||||||| |||| |||| ||||| Sbjct: 429 gcgacggcaagaaggagcaccagttctacctctggttcgacccctccgccgacttccaca 488 Query: 517 cctacaccatcatctggaacccggagaacatcctcttcaaggt 559 |||||| |||| ||||||||| |||||||| ||||| |||| Sbjct: 489 cctacaagatcacctggaaccccaagaacatcatcttcgaggt 531
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 262 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 321 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 322 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 381 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 382 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 441 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 442 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 501 Query: 527 catctggaa 535 ||||||||| Sbjct: 502 catctggaa 510
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 267 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 326 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 327 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 386 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 387 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 446 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 447 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 506 Query: 527 catctggaa 535 ||||||||| Sbjct: 507 catctggaa 515
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 8321935 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 8321994 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 8321995 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 8322054 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 8322055 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 8322114 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 8322115 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 8322174 Query: 527 catctggaa 535 ||||||||| Sbjct: 8322175 catctggaa 8322183 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| ||||||||||||||| |||| |||| |||||||||| ||||| || Sbjct: 8378907 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 8378848 Query: 531 tggaaccc 538 |||||||| Sbjct: 8378847 tggaaccc 8378840 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 506 agactaccacacctacaccatcatctggaacccg 539 ||||| ||| |||||||||||||||||||||||| Sbjct: 8488366 agacttccatacctacaccatcatctggaacccg 8488399 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 504 gcagactaccacacctacaccatcatctggaacc 537 ||||||| ||| |||||||||||||||||||||| Sbjct: 8482557 gcagacttccatacctacaccatcatctggaacc 8482590
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 258 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 317 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 318 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 377 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 378 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 437 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 438 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 497 Query: 527 catctggaa 535 ||||||||| Sbjct: 498 catctggaa 506
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 62044 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 62103 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 62104 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 62163 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 62164 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 62223 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 62224 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 62283 Query: 527 catctggaa 535 ||||||||| Sbjct: 62284 catctggaa 62292 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| ||||||||||||||| |||| |||| |||||||||| ||||| || Sbjct: 119016 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 118957 Query: 531 tggaaccc 538 |||||||| Sbjct: 118956 tggaaccc 118949
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 267 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 326 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 327 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 386 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 387 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 446 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 447 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 506 Query: 527 catctggaa 535 ||||||||| Sbjct: 507 catctggaa 515
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 184 bits (93), Expect = 2e-43 Identities = 210/249 (84%) Strand = Plus / Plus Query: 287 cggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcaccgtctcctg 346 ||||||||||||| |||||||||||||| || || |||||||||||||||||| ||| Sbjct: 262 cggcgagttcagcgtccagatgaagctcgtcggcggcaactccgccggcaccgtcacctc 321 Query: 347 cttctacctttcttccggtgacgacgagtggcgcgacgagatcgacatggagttcaaggg 406 ||||||||| || ||||| || | ||| | | ||||||||||||||| ||||||| ||| Sbjct: 322 cttctacctctcctccggcgagggcgacggccacgacgagatcgacatcgagttcatggg 381 Query: 407 caactccagcggccacccggtggtgctcaacaccaacgtgtgggccaacggcgacggcaa 466 |||| ||||||| |||| || | ||||||||||| ||||| || ||||||||||| Sbjct: 382 caacctcagcggcaacccctacgtcatgaacaccaacgtctgggctaatggcgacggcaa 441 Query: 467 gaaggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccat 526 |||||||||||||||| |||||||||||||||| |||| |||| ||||||||||| || Sbjct: 442 gaaggagcaccagttctacctctggttcgaccccaccgccgacttccacacctacaagat 501 Query: 527 catctggaa 535 ||||||||| Sbjct: 502 catctggaa 510
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 180 bits (91), Expect = 4e-42 Identities = 145/163 (88%) Strand = Plus / Plus Query: 427 tggtgctcaacaccaacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacc 486 ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 7 tggtgctgaacaccaacgtgtgggccaacggcgacggctagaaggagcaccagttctacc 66 Query: 487 tctggttcgacccagccgcagactaccacacctacaccatcatctggaacccggagaaca 546 | ||||||||||| ||||| |||| ||||||||||||||||||||||||| ||||| Sbjct: 67 tgtggttcgacccggccgccgacttccacacctacaccatcatctggaacgacaagaacg 126 Query: 547 tcctcttcaaggtggacaacctcttcatccgatccttcaagcg 589 || |||||||||||||| |||||||| | || | ||||||||| Sbjct: 127 tcatcttcaaggtggacgacctcttcgtgcggtgcttcaagcg 169
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttcaagggcaactccagcggccacccggtggtgctcaacac 439 ||||||||||||||| ||||||| ||||||||| |||||| |||| ||| | ||||| Sbjct: 343 cgacgagatcgacatcgagttcatgggcaactcgagcggcgacccctacgtgatgaacac 402 Query: 440 caacgtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcgaccc 499 |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 403 caacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttcgaccc 462 Query: 500 agccgcagactaccacacctacaccatcatctggaacccggagaacatcctcttcaaggt 559 |||| |||| ||||||||||| |||| |||||||| |||||||| | ||| |||| Sbjct: 463 ctccgccgacttccacacctacaagatcacatggaacccaaagaacatcatattcgaggt 522 Query: 560 ggac 563 |||| Sbjct: 523 ggac 526 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||||||||| ||| |||||||||| || || ||||||||||||| Sbjct: 240 agtacctcttcggcgagttccaggtccggatgaagctcgtcgacggcaactccgccggca 299 Query: 337 ccgtctcctgcttctacct 355 ||||| ||| ||||||||| Sbjct: 300 ccgtcacctccttctacct 318
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 384 gagatcgacatggagttcaagggcaactccagcggccacccggtggtgctcaacaccaac 443 ||||||||||| ||||||| ||| ||||| ||||| || || ||| | ||||||||| Sbjct: 364 gagatcgacattgagttcatggggaactcgagcgggcagccctacgtgatgaacaccaac 423 Query: 444 gtgtgggccaacggcgacggcaagaaggagcaccagttcgacctctggttcgacccagcc 503 |||||||||| |||||||||||||||||||||||||||| ||||||||||||| || || Sbjct: 424 gtgtgggccagcggcgacggcaagaaggagcaccagttctacctctggttcgatccctcc 483 Query: 504 gcagactaccacacctacaccatcatctggaacccggagaacatcctcttcaaggtggac 563 || || | ||||||||||| |||| ||||||||| |||||||| | ||| |||||||| Sbjct: 484 gccgatttccacacctacaagatcacctggaaccccaagaacatcatattcgaggtggac 543 Query: 564 aac 566 ||| Sbjct: 544 aac 546 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 256 ccggattcaactccaagcagcagtacctctacggcgagttcagcatccagatgaagctca 315 |||| ||||| |||||| | ||||||||| ||||||||||||| ||| |||||||||| Sbjct: 236 ccggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatgaagctcg 295 Query: 316 tcccgggaaactccgccggcaccgtctcctgcttcta 352 || || |||||||||||||||||| ||| |||||| Sbjct: 296 tcgacggcaactccgccggcaccgtcacctccttcta 332
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| |||||||||||||||| |||| |||| ||||| |||||||||| | Sbjct: 429 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 488 Query: 530 ctggaaccc 538 ||||||||| Sbjct: 489 ctggaaccc 497 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatccc 319 |||||| | |||| ||||| ||||||||||||||| ||||||||||| |||| Sbjct: 229 tccaaggaccagttcctcttcggcgagttcagcatggagatgaagctcgtccc 281
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| |||||||||||||||| |||| |||| ||||| |||||||||| | Sbjct: 32621 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 32562 Query: 530 ctggaaccc 538 ||||||||| Sbjct: 32561 ctggaaccc 32553 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| ||||||||||||||| |||| ||||||||||||||| ||||| || Sbjct: 29252 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 29311 Query: 531 tggaaccc 538 |||||||| Sbjct: 29312 tggaaccc 29319 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatccc 319 |||||| | |||| ||||| ||||||||||||||| ||||||||||| |||| Sbjct: 32976 tccaaggaccagttcctcttcggcgagttcagcatggagatgaagctcgtccc 32924 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 304 agatgaagctcatcccgggaaactccgccggcaccgtct 342 |||| ||||||||| |||| |||||||||||||||||| Sbjct: 28893 agatcaagctcatcgagggagactccgccggcaccgtct 28931
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| |||||||||||||||| |||| |||| ||||| |||||||||| | Sbjct: 30556913 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 30556854 Query: 530 ctggaaccc 538 ||||||||| Sbjct: 30556853 ctggaaccc 30556845 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| ||||||||||||||| |||| ||||||||||||||| ||||| || Sbjct: 30553544 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 30553603 Query: 531 tggaaccc 538 |||||||| Sbjct: 30553604 tggaaccc 30553611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| |||||||||||||||| || | |||| |||||||||| ||||| || Sbjct: 30516931 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 30516872 Query: 531 tgga 534 |||| Sbjct: 30516871 tgga 30516868 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatccc 319 |||||| | |||| ||||| ||||||||||||||| ||||||||||| |||| Sbjct: 30557268 tccaaggaccagttcctcttcggcgagttcagcatggagatgaagctcgtccc 30557216 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 304 agatgaagctcatcccgggaaactccgccggcaccgtct 342 |||| ||||||||| |||| |||||||||||||||||| Sbjct: 30553185 agatcaagctcatcgagggagactccgccggcaccgtct 30553223 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 481 tcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||| ||||||||||| |||| |||| |||||||||| || | |||||||||| Sbjct: 32180524 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 32180581
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| |||||||||||||||| |||| |||| ||||| |||||||||| | Sbjct: 497 ggagcagcagttctacctctggttcgaccccaccgccgacttccacaactacaccatcct 556 Query: 530 ctggaaccc 538 ||||||||| Sbjct: 557 ctggaaccc 565 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatccc 319 |||||| | |||| ||||| ||||||||||||||| ||||||||||| |||| Sbjct: 297 tccaaggaccagttcctcttcggcgagttcagcatggagatgaagctcgtccc 349
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| ||||||||||||||| |||| ||||||||||||||| ||||| || Sbjct: 418 gagcagcagttccgcctctggttcgaccccaccgccgactaccacacctactccatcgtc 477 Query: 531 tggaaccc 538 |||||||| Sbjct: 478 tggaaccc 485 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 304 agatgaagctcatcccgggaaactccgccggcaccgtct 342 |||| ||||||||| |||| |||||||||||||||||| Sbjct: 248 agatcaagctcatcgagggagactccgccggcaccgtct 286
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| ||||||||||||||| |||| |||| |||||||||| ||||| | Sbjct: 527 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcct 586 Query: 530 ctggaacccggagaacatcctcttcaaggtggac 563 ||||||||| || || || |||||| ||||||| Sbjct: 587 ctggaaccccaagcacgtcatcttcatggtggac 620 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 318 ccgggaaactccgccggcaccgtc 341 ||||| |||||||||||||||||| Sbjct: 378 ccgggcaactccgccggcaccgtc 401
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| ||||||||||||||| |||| |||| |||||||||| ||||| || Sbjct: 439 gagcagcagttccgcctctggttcgaccccaccgccgacttccacacctactccatcgtc 498 Query: 531 tggaaccc 538 |||||||| Sbjct: 499 tggaaccc 506
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| ||||||| |||||||||||||| |||| |||| |||||||||| ||||| || Sbjct: 28754807 gagcagcagttcgtgctctggttcgaccccaccgccgacttccacacctactccatcctc 28754866 Query: 531 tggaaccc 538 |||||||| Sbjct: 28754867 tggaaccc 28754874 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaac 326 |||||||| |||||||||||||| || || ||| ||| | |||||| |||| || ||| Sbjct: 28773935 tccaagcacgagtacctctacggcaagatcgacatgcagctcaagctcgtccccggcaac 28773876 Query: 327 tccgccggcaccgtc 341 ||||||||||||||| Sbjct: 28773875 tccgccggcaccgtc 28773861 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| |||||| |||| || ||||||||||||| Sbjct: 28749742 agtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggca 28749801 Query: 337 ccgtc 341 ||||| Sbjct: 28749802 ccgtc 28749806 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttcaagggcaactccagcggcc 420 ||||||||||||| | |||||| ||||||||||||||||| Sbjct: 13230404 cgacgagatcgacttcgagttcctgggcaactccagcggcc 13230444 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 303 cagatgaagctcatcccgggaaactccgccggcaccgtc 341 ||||| |||||| |||| || |||||||||||||||||| Sbjct: 28761548 cagatcaagctcgtccccggcaactccgccggcaccgtc 28761586 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 512 ccacacctacaccatcatctggaaccc 538 |||||||||| |||||||||||||||| Sbjct: 28750108 ccacacctactccatcatctggaaccc 28750134 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 488 ctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||| ||| | |||||||| |||||||||| |||||||||| Sbjct: 13230512 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaaccc 13230562
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| ||||||| |||||||||||||| |||| |||| |||||||||| ||||| || Sbjct: 62582 gagcagcagttcgtgctctggttcgaccccaccgccgacttccacacctactccatcctc 62641 Query: 531 tggaaccc 538 |||||||| Sbjct: 62642 tggaaccc 62649 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Minus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaac 326 |||||||| |||||||||||||| || || ||| ||| | |||||| |||| || ||| Sbjct: 81710 tccaagcacgagtacctctacggcaagatcgacatgcagctcaagctcgtccccggcaac 81651 Query: 327 tccgccggcaccgtc 341 ||||||||||||||| Sbjct: 81650 tccgccggcaccgtc 81636 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| |||||| |||| || ||||||||||||| Sbjct: 57517 agtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggca 57576 Query: 337 ccgtc 341 ||||| Sbjct: 57577 ccgtc 57581 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 303 cagatgaagctcatcccgggaaactccgccggcaccgtc 341 ||||| |||||| |||| || |||||||||||||||||| Sbjct: 69323 cagatcaagctcgtccccggcaactccgccggcaccgtc 69361 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 512 ccacacctacaccatcatctggaaccc 538 |||||||||| |||||||||||||||| Sbjct: 57883 ccacacctactccatcatctggaaccc 57909
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| ||||||| |||||||||||||| |||| |||| |||||||||| ||||| || Sbjct: 155373 gagcagcagttcgtgctctggttcgaccccaccgccgacttccacacctactccatcctc 155432 Query: 531 tggaaccc 538 |||||||| Sbjct: 155433 tggaaccc 155440 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| |||||| |||| || ||||||||||||| Sbjct: 150308 agtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggca 150367 Query: 337 ccgtc 341 ||||| Sbjct: 150368 ccgtc 150372 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 303 cagatgaagctcatcccgggaaactccgccggcaccgtc 341 ||||| |||||| |||| || |||||||||||||||||| Sbjct: 162114 cagatcaagctcgtccccggcaactccgccggcaccgtc 162152 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 512 ccacacctacaccatcatctggaaccc 538 |||||||||| |||||||||||||||| Sbjct: 150674 ccacacctactccatcatctggaaccc 150700
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 486 ctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||||| |||| |||| |||||||||| ||||| |||||||||| Sbjct: 262 ctctggttcgaccccaccgccgacttccacacctacgccatcctctggaaccc 314
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| |||||||||||||||| || | |||| |||||||||| ||||| || Sbjct: 385 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 444 Query: 531 tgga 534 |||| Sbjct: 445 tgga 448
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| |||||||||||||||| || | |||| |||||||||| ||||| || Sbjct: 150308 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 150249 Query: 531 tgga 534 |||| Sbjct: 150248 tgga 150245
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| |||||||||||||||| || | |||| |||||||||| ||||| || Sbjct: 457 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 516 Query: 531 tgga 534 |||| Sbjct: 517 tgga 520
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 471 gagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcatc 530 ||||| |||||| |||||||||||||||| || | |||| |||||||||| ||||| || Sbjct: 475 gagcagcagttccacctctggttcgaccccaccaccgacttccacacctactccatcgtc 534 Query: 531 tgga 534 |||| Sbjct: 535 tgga 538
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| |||||| |||| || ||||||||||||| Sbjct: 294 agtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggca 353 Query: 337 ccgtctcctgcttctacct 355 ||||| || ||||||||| Sbjct: 354 ccgtcaccaccttctacct 372 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| ||||||||||||||| || | || |||||||||| ||||||| Sbjct: 484 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 543 Query: 530 ctggaacccg 539 |||||||||| Sbjct: 544 ctggaacccg 553
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaac 326 |||||||| |||||||||||||| || || ||| ||| | |||||| |||| || ||| Sbjct: 297 tccaagcacgagtacctctacggcaagatcgacatgcagctcaagctcgtccccggcaac 356 Query: 327 tccgccggcaccgtc 341 ||||||||||||||| Sbjct: 357 tccgccggcaccgtc 371
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 54.0 bits (27), Expect = 5e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 267 tccaagcagcagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaac 326 |||||||| |||||||||||||| || || ||| ||| | |||||| |||| || ||| Sbjct: 287 tccaagcacgagtacctctacggcaagatcgacatgcagctcaagctcgtccccggcaac 346 Query: 327 tccgccggcaccgtc 341 ||||||||||||||| Sbjct: 347 tccgccggcaccgtc 361
>ref|XM_480899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 506 agactaccacacctacaccatcatctggaacccg 539 ||||| ||| |||||||||||||||||||||||| Sbjct: 441 agacttccatacctacaccatcatctggaacccg 474
>ref|XM_480898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 861 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 504 gcagactaccacacctacaccatcatctggaacc 537 ||||||| ||| |||||||||||||||||||||| Sbjct: 433 gcagacttccatacctacaccatcatctggaacc 466
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| |||||||||||| || || |||| |||||||||| ||||| | Sbjct: 423 ggagcaacagttccgcctctggttcgatcccaccaacgacttccacacctactccatcct 482 Query: 530 ctggaacccggagaacatcctcttcaaggtggac 563 ||||||||| || ||||| |||||| ||||||| Sbjct: 483 ctggaacccaaagcacatcatcttcatggtggac 516
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 504 gcagactaccacacctacaccatcatctggaacc 537 ||||||| ||| |||||||||||||||||||||| Sbjct: 98274 gcagacttccatacctacaccatcatctggaacc 98307
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| ||||||||||||||| || | || |||||||||| ||||||| Sbjct: 378 ggagcagcagttccgcctctggttcgaccccaccaaggccttccacacctactccatcat 437 Query: 530 ctggaacccg 539 |||||||||| Sbjct: 438 ctggaacccg 447 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 303 cagatgaagctcatcccgggaaactccgccggcaccgtctcctgcttctacct 355 ||||| |||||| |||| || |||||||||||||||||| || ||||||||| Sbjct: 214 cagatcaagctcgtccccggcaactccgccggcaccgtcaccaccttctacct 266
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 506 agactaccacacctacaccatcatctggaacccg 539 ||||| ||| |||||||||||||||||||||||| Sbjct: 277 agacttccatacctacaccatcatctggaacccg 310
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 506 agactaccacacctacaccatcatctggaacccg 539 ||||| ||| |||||||||||||||||||||||| Sbjct: 17909 agacttccatacctacaccatcatctggaacccg 17942 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 504 gcagactaccacacctacaccatcatctggaacc 537 ||||||| ||| |||||||||||||||||||||| Sbjct: 12100 gcagacttccatacctacaccatcatctggaacc 12133
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttcaagggcaactccagcggcc 420 ||||||||||||| | |||||| ||||||||||||||||| Sbjct: 147592 cgacgagatcgacttcgagttcctgggcaactccagcggcc 147632 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 488 ctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||| ||| | |||||||| |||||||||| |||||||||| Sbjct: 147700 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaaccc 147750
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 303 cagatgaagctcatcccgggaaactccgccggcaccgtctcctgcttctacct 355 ||||| |||||| |||| || |||||||||||||||||| || ||||||||| Sbjct: 314 cagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacct 366
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| |||||| |||| || ||||||||||||| Sbjct: 290 agtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggca 349 Query: 337 ccgtc 341 ||||| Sbjct: 350 ccgtc 354 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 512 ccacacctacaccatcatctggaaccc 538 |||||||||| |||||||||||||||| Sbjct: 522 ccacacctactccatcatctggaaccc 548
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| |||||| |||| || ||||||||||||| Sbjct: 290 agtacctcttcggcaagatcgacatgcagatcaagctcgtccccggcaactccgccggca 349 Query: 337 ccgtc 341 ||||| Sbjct: 350 ccgtc 354 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 512 ccacacctacaccatcatctggaaccc 538 |||||||||| |||||||||||||||| Sbjct: 522 ccacacctactccatcatctggaaccc 548
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttcaagggcaactccagcggcc 420 ||||||||||||| | |||||| ||||||||||||||||| Sbjct: 645 cgacgagatcgacttcgagttcctgggcaactccagcggcc 685 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 488 ctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||| ||| | |||||||| |||||||||| |||||||||| Sbjct: 753 ctggttcgaccccaccgacggctaccacaactacaccatcttctggaaccc 803
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 348 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 407
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctac 521 |||||| |||||| ||||||||||||||| |||| |||| |||||||||| Sbjct: 706 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 655
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 471775 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 471716
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 471773 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 471714
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 668 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 727
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 573 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 632
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 580 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 639
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctac 521 |||||| |||||| ||||||||||||||| |||| |||| |||||||||| Sbjct: 498 ggagcagcagttccgcctctggttcgaccccaccgccgacttccacacctac 549
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 479 gttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 70235 gttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 70176
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 484 acctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 482 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 536 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttc 401 |||||||||||||||||||||| Sbjct: 363 cgacgagatcgacatggagttc 384
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 512 ccacacctacaccatcatctggaaccc 538 |||||||||| |||||||||||||||| Sbjct: 414 ccacacctactccatcatctggaaccc 440 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 277 agtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggca 336 ||||||||| |||| || || ||| ||||| ||| || |||| || ||||||||||||| Sbjct: 182 agtacctcttcggcaagatcgacatgcagatcaagttcgtccccggcaactccgccggca 241 Query: 337 ccgtc 341 ||||| Sbjct: 242 ccgtc 246
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 484 acctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 17438397 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 17438451 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 489 tggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||||||| |||| |||| |||| ||||| ||||| |||||||||| Sbjct: 20676569 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 20676618 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttc 401 |||||||||||||||||||||| Sbjct: 17438278 cgacgagatcgacatggagttc 17438299
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 484 acctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 |||||||||||||||| |||| |||| |||| |||| ||||| |||||||||| Sbjct: 106621 acctctggttcgaccccaccgccgacttccaccactacgccatcctctggaaccc 106675 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 380 cgacgagatcgacatggagttc 401 |||||||||||||||||||||| Sbjct: 106502 cgacgagatcgacatggagttc 106523
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 276 cagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggc 335 ||||||||||||||| ||| ||| ||| | |||||| ||||||| ||||||||||| Sbjct: 300 cagtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggc 359 Query: 336 accgtctcctgcttctacctttc 358 |||||| || |||||| ||||| Sbjct: 360 accgtcgccaccttctatctttc 382
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 276 cagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggc 335 ||||||||||||||| ||| ||| ||| | |||||| ||||||| ||||||||||| Sbjct: 307 cagtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggc 366 Query: 336 accgtctcctgcttctacctttc 358 |||||| || |||||| ||||| Sbjct: 367 accgtcgccaccttctatctttc 389
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 187 tccgcaccggatacgacgcctcgggc 212 ||||||||||||||||| |||||||| Sbjct: 1879981 tccgcaccggatacgacacctcgggc 1880006
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 489 tggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||||||| |||| |||| |||| ||||| ||||| |||||||||| Sbjct: 454 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 503
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 489 tggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||||||| |||| |||| |||| ||||| ||||| |||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 595
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Plus Query: 484 acctctggttcgacccagccgcagactaccacacctacaccatcatctggaacc 537 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 498 acctctggttcgacccaaccaaggactaccactcctactccgtcctctggaacc 551
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 481 tcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||| ||||||||||| |||| |||| |||||||||| || | |||||||||| Sbjct: 76213 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 76270
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 452 caacggcgacggcaagaaggag 473 |||||||||||||||||||||| Sbjct: 13222658 caacggcgacggcaagaaggag 13222679
>gb|AC019164.9| Homo sapiens BAC clone RP11-146J19 from 2, complete sequence Length = 117543 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 32 tttggagctcaattgattccaagaag 57 ||||||||||| |||||||||||||| Sbjct: 10293 tttggagctcacttgattccaagaag 10268
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 489 tggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||||||| |||| |||| |||| ||||| ||||| |||||||||| Sbjct: 29319 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 29368
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 489 tggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||||||| |||| |||| |||| ||||| ||||| |||||||||| Sbjct: 546 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 595
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 481 tcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||| ||||||||||| |||| |||| |||||||||| || | |||||||||| Sbjct: 435 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 492
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 489 tggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||||||| |||| |||| |||| ||||| ||||| |||||||||| Sbjct: 640 tggttcgaccccaccgccgacttccactcctactccatcctctggaaccc 689
>dbj|AK071491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098J19, full insert sequence Length = 1289 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 452 caacggcgacggcaagaaggag 473 |||||||||||||||||||||| Sbjct: 696 caacggcgacggcaagaaggag 717
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 481 tcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||| ||||||||||| |||| |||| |||||||||| || | |||||||||| Sbjct: 439 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 496
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 44.1 bits (22), Expect = 0.53 Identities = 58/70 (82%) Strand = Plus / Plus Query: 470 ggagcaccagttcgacctctggttcgacccagccgcagactaccacacctacaccatcat 529 |||||| |||||| ||||||||||||||| || | | || |||||||||| ||||| | Sbjct: 509 ggagcagcagttccgcctctggttcgaccctaccactgccttccacacctactccatcct 568 Query: 530 ctggaacccg 539 ||||||||| Sbjct: 569 gtggaacccg 578
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 44.1 bits (22), Expect = 0.53 Identities = 49/58 (84%) Strand = Plus / Plus Query: 481 tcgacctctggttcgacccagccgcagactaccacacctacaccatcatctggaaccc 538 ||||||| ||||||||||| |||| |||| |||||||||| || | |||||||||| Sbjct: 31700 tcgacctgtggttcgaccccaccgccgacttccacacctacgccgtgctctggaaccc 31757
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 44.1 bits (22), Expect = 0.53 Identities = 55/66 (83%) Strand = Plus / Plus Query: 276 cagtacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggc 335 ||||||||||||||| ||| ||| ||| | |||||| ||||||| ||||||||||| Sbjct: 190 cagtacctctacggccgcttcgacatgcagctcaagctcgtcccgggggactccgccggc 249 Query: 336 accgtc 341 |||||| Sbjct: 250 accgtc 255
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 452 caacggcgacggcaagaaggag 473 |||||||||||||||||||||| Sbjct: 13176932 caacggcgacggcaagaaggag 13176953
>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 193499 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 452 caacggcgacggcaagaaggag 473 |||||||||||||||||||||| Sbjct: 108085 caacggcgacggcaagaaggag 108064
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Plus Query: 484 acctctggttcgacccagccgcagactaccacacctacaccatcatctggaacc 537 ||||||||||||||||| || ||||||||| ||||| || || ||||||||| Sbjct: 459 acctctggttcgacccaaccaaggactaccactcctactccgtcctctggaacc 512
>ref|XM_531425.1| PREDICTED: Pan troglodytes chromosome 21 open reading frame 108 (LOC473954), mRNA Length = 5429 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 2387 tccaccaggacatccaccatg 2367
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Plus Query: 478 agttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctgga 534 ||||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||| Sbjct: 497 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 553
>gb|AY657308.1| Synthetic construct Peudomonas aeruginosa clone FLH043418.01F PA0542 gene, partial cds Length = 420 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 tgctcgccgtcgccctggcgctctc 130 ||||||||||||||||| ||||||| Sbjct: 38 tgctcgccgtcgccctgccgctctc 62
>gb|AY259141.1| Streptomyces lividans Slp25 precursor (slp25) gene, complete cds Length = 1173 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ccgacggcaccgtccgcaccg 195 ||||||||||||||||||||| Sbjct: 589 ccgacggcaccgtccgcaccg 569
>ref|XM_544859.2| PREDICTED: Canis familiaris similar to Nucleolar preribosomal-associated protein 1 (LOC487735), mRNA Length = 7421 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 2276 tccaccaggacatccaccatg 2256
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 366 gacgacgagtggcgcgacgag 386 ||||||||||||||||||||| Sbjct: 1621735 gacgacgagtggcgcgacgag 1621715
>emb|AL954207.1| Pan troglodytes chromosome 22 clone PTB-375M11 map q21.1, complete sequence Length = 132049 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 18308 tccaccaggacatccaccatg 18328
>emb|AL731561.12| Human DNA sequence from clone RP11-463P17 on chromosome 10 Contains a novel gene, gene FLJ32104, a novel gene, the RBP3 gene for retinol binding protein 3, the GDF2 gene for growth differentiation factor 2, the GDF10 gene for growth differentiation factor 10 and three CpG islands, complete sequence Length = 204512 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccacaa 21 ||||||||||||||||||||| Sbjct: 13353 accacacacaacacaccacaa 13373
>emb|AL603965.10| Human DNA sequence from clone RP11-145E20 on chromosome 10 Contains a ARF GTPase-activating protein (MRIP2) pseudogene, the gene for a novel protein similar to annexin A8 (ANXA8) the 5' end of a novel gene similar to LOC195977 (FLJ32754), a novel pseudogene and a novel gene, complete sequence Length = 104811 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccacaa 21 ||||||||||||||||||||| Sbjct: 94767 accacacacaacacaccacaa 94787
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 102 gctgtgctcgccgtcgccctg 122 ||||||||||||||||||||| Sbjct: 4101614 gctgtgctcgccgtcgccctg 4101634
>ref|XM_500384.1| Yarrowia lipolytica CLIB122, YALI0B01386g predicted mRNA Length = 2127 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 245 atccggcgccgccggattcaactccaagc 273 ||||||| || |||||||||||||||||| Sbjct: 606 atccggcacctccggattcaactccaagc 634
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ccgacggcaccgtccgcaccg 195 ||||||||||||||||||||| Sbjct: 136652 ccgacggcaccgtccgcaccg 136672
>emb|AL954206.1| Pan troglodytes chromosome 22 clone PTB-052N04 map q21.1, complete sequence Length = 153753 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 139176 tccaccaggacatccaccatg 139196
>gb|AF231919.1| Homo sapiens chromosome 21 C21orf108 mRNA, partial cds Length = 10646 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 2207 tccaccaggacatccaccatg 2187
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 478 agttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctgga 534 ||||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||| Sbjct: 35396754 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 35396698 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 310 agctcatcccgggaaactccgccggcaccgtc 341 ||||| |||| || |||||||||||||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtc 10358936 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 attccaagaagctctctagt 66 |||||||||||||||||||| Sbjct: 8068404 attccaagaagctctctagt 8068423
>dbj|AP000033.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 4/28, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 55044 tccaccaggacatccaccatg 55024
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 366 gacgacgagtggcgcgacgagatcg 390 ||||| ||||||||||||||||||| Sbjct: 6887469 gacgaggagtggcgcgacgagatcg 6887493 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 gtggcgcgacgagatcgaca 393 |||||||||||||||||||| Sbjct: 4067517 gtggcgcgacgagatcgaca 4067498
>gb|AE004490.1| Pseudomonas aeruginosa PAO1, section 51 of 529 of the complete genome Length = 11445 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 tgctcgccgtcgccctggcgctctc 130 ||||||||||||||||| ||||||| Sbjct: 9311 tgctcgccgtcgccctgccgctctc 9287
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 478 agttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctgga 534 ||||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||| Sbjct: 8275 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 8219
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 478 agttcgacctctggttcgacccagccgcagactaccacacctacaccatcatctgga 534 ||||| |||||||||||||||| |||| |||| |||| |||| ||||| |||||| Sbjct: 57302 agttccacctctggttcgaccccaccgccgacttccaccactacgccatcctctgga 57246
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 279 tacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcacc 338 ||||||| |||| | |||||||| || || |||||| || | || |||||||||||||| Sbjct: 247 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 306 Query: 339 gtctcctgcttctacct 355 ||| || ||||||||| Sbjct: 307 gtcaccgccttctacct 323
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 42.1 bits (21), Expect = 2.1 Identities = 63/77 (81%) Strand = Plus / Plus Query: 279 tacctctacggcgagttcagcatccagatgaagctcatcccgggaaactccgccggcacc 338 ||||||| |||| | |||||||| || || |||||| || | || |||||||||||||| Sbjct: 244 tacctcttcggccacttcagcatgcacatcaagctcgtcgccggcgactccgccggcacc 303 Query: 339 gtctcctgcttctacct 355 ||| || ||||||||| Sbjct: 304 gtcaccgccttctacct 320
>dbj|AP001713.1| Homo sapiens genomic DNA, chromosome 21q, section 57/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 319016 tccaccaggacatccaccatg 319036
>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence Length = 170607 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 cacacacaacacaccacaaag 23 ||||||||||||||||||||| Sbjct: 109667 cacacacaacacaccacaaag 109687 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 cacacacaacacaccacaaag 23 ||||||||||||||||||||| Sbjct: 109638 cacacacaacacaccacaaag 109658
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 245 atccggcgccgccggattcaactccaagc 273 ||||||| || |||||||||||||||||| Sbjct: 234649 atccggcacctccggattcaactccaagc 234677
>dbj|AP000268.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:D1, complete sequence Length = 52777 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 17610 tccaccaggacatccaccatg 17630
>dbj|AP000178.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 5/21, complete sequence Length = 100000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 81855 tccaccaggacatccaccatg 81875
>dbj|AP000102.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 5/20 Length = 100000 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 81855 tccaccaggacatccaccatg 81875
>dbj|AB011111.2| Homo sapiens mRNA for KIAA0539 protein, partial cds Length = 7594 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 tccaccaggacatccaccatg 86 ||||||||||||||||||||| Sbjct: 1603 tccaccaggacatccaccatg 1583
>ref|NM_197427.1| Oryza sativa (japonica cultivar-group) putative chorismate mutase/prephenate dehydratase (OSJNBa0096G08.15), mRNA Length = 1227 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 caacggcgacggcaagaagg 471 |||||||||||||||||||| Sbjct: 174 caacggcgacggcaagaagg 193
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctggctgtgctcgccgtcgc 118 |||||||||||||||||||| Sbjct: 1290716 ctggctgtgctcgccgtcgc 1290697
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gttcaagggcaactccagcggcca 421 ||||||||||||| |||||||||| Sbjct: 2488918 gttcaagggcaacgccagcggcca 2488895
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 caacggcgacggcaagaagg 471 |||||||||||||||||||| Sbjct: 88576 caacggcgacggcaagaagg 88557
>ref|XM_419875.1| PREDICTED: Gallus gallus similar to 5-HT1B receptor (LOC421858), mRNA Length = 2364 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gtgctcgccgtcgccctggcgctc 128 ||||||||||||| |||||||||| Sbjct: 121 gtgctcgccgtcgtcctggcgctc 144
>gb|AC148311.2| Pan troglodytes BAC clone RP43-29P9 from 7, complete sequence Length = 161683 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcctgcttctacctttctt 360 |||||||||||||||||||| Sbjct: 39321 ctcctgcttctacctttctt 39340
>gb|AC074115.4| Homo sapiens BAC clone RP11-291N9 from 7, complete sequence Length = 81289 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 ctcctgcttctacctttctt 360 |||||||||||||||||||| Sbjct: 60335 ctcctgcttctacctttctt 60354
>gb|AC146511.3| Pan troglodytes BAC clone RP43-72N15 from 7, complete sequence Length = 192395 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ctcctgcttctacctttctt 360 |||||||||||||||||||| Sbjct: 139067 ctcctgcttctacctttctt 139048
>gb|AC106705.7| Homo sapiens 3 BAC RP11-262L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100464 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 57060 accacacacaacacaccaca 57041
>emb|AL158822.19| Human DNA sequence from clone RP11-100C15 on chromosome 9q34.2-34.3 Contains the 3' end of a novel gene containing DKFZp434G2311, the KCNT1 gene for member 1 of the potassium channel subfamily T, the 3' end of a novel gene, part of the gene for a novel protein similar to mouse RIKEN 9230102I19 (9230102I19RIK) and nine CpG islands, complete sequence Length = 187336 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 61343 accacacacaacacaccaca 61362
>emb|AL133257.17| Human DNA sequence from clone RP1-166D18 on chromosome 6q22.1-22.33 Contains part of the TRDN gene for triadin (TDN, TRIADIN), complete sequence Length = 130748 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cacacacaacacaccacaaa 22 |||||||||||||||||||| Sbjct: 31076 cacacacaacacaccacaaa 31095
>gb|AE005881.1| Caulobacter crescentus CB15 section 207 of 359 of the complete genome Length = 11854 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 gttcaacaccgacggcaccg 186 |||||||||||||||||||| Sbjct: 3644 gttcaacaccgacggcaccg 3663
>ref|NM_169970.1| Drosophila melanogaster Calcium/calmodulin-dependent protein kinase CG6703-RA, transcript variant A (Caki), mRNA Length = 4129 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 cggtgacgacgagtggcgcg 381 |||||||||||||||||||| Sbjct: 1175 cggtgacgacgagtggcgcg 1156
>gb|AC011374.6| Homo sapiens chromosome 5 clone CTB-113P19, complete sequence Length = 203961 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 61596 accacacacaacacaccaca 61577
>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence Length = 177483 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 atgaagctcatcccgggaaa 325 |||||||||||||||||||| Sbjct: 46165 atgaagctcatcccgggaaa 46184
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 caacggcgacggcaagaagg 471 |||||||||||||||||||| Sbjct: 19827538 caacggcgacggcaagaagg 19827519
>gb|AC008195.6|AC008195 Drosophila melanogaster, chromosome 3R, region 93F-93F, BAC clone BACR42I20, complete sequence Length = 164944 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 cggtgacgacgagtggcgcg 381 |||||||||||||||||||| Sbjct: 58599 cggtgacgacgagtggcgcg 58618
>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete sequence Length = 146998 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 65640 accacacacaacacaccaca 65659
>gb|BT003550.1| Drosophila melanogaster RE01835 full insert cDNA Length = 3993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 cggtgacgacgagtggcgcg 381 |||||||||||||||||||| Sbjct: 1040 cggtgacgacgagtggcgcg 1021
>gb|AC092127.3| Homo sapiens chromosome 16 clone RP11-118F19, complete sequence Length = 62827 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 23431 accacacacaacacaccaca 23412
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 attccaagaagctctctagt 66 |||||||||||||||||||| Sbjct: 56597 attccaagaagctctctagt 56616
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 310 agctcatcccgggaaactccgccggcaccgtc 341 ||||| |||| || |||||||||||||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtc 1358
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 310 agctcatcccgggaaactccgccggcaccgtc 341 ||||| |||| || |||||||||||||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtc 124746
>dbj|AK099858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110M24, full insert sequence Length = 1700 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 caacggcgacggcaagaagg 471 |||||||||||||||||||| Sbjct: 293 caacggcgacggcaagaagg 312
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ctcgccgtcgccctggcgct 127 |||||||||||||||||||| Sbjct: 4037246 ctcgccgtcgccctggcgct 4037265
>gb|AY104759.1| Zea mays PCO076392 mRNA sequence Length = 1034 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cgacggcaccgtccgcaccg 195 |||||||||||||||||||| Sbjct: 222 cgacggcaccgtccgcaccg 241
>gb|AE003736.3| Drosophila melanogaster chromosome 3R, section 74 of 118 of the complete sequence Length = 235928 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 cggtgacgacgagtggcgcg 381 |||||||||||||||||||| Sbjct: 84607 cggtgacgacgagtggcgcg 84626
>dbj|AP001979.7| Homo sapiens genomic DNA, chromosome 11 clone:RP11-259P6, complete sequence Length = 147533 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 105474 accacacacaacacaccaca 105493
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 200691 accacacacaacacaccaca 200710
>gb|AC092203.16| Mus musculus strain C57BL/6J chromosome 3 clone rp23-422n18, complete sequence Length = 188880 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 cacacacaacacaccacaaa 22 |||||||||||||||||||| Sbjct: 28867 cacacacaacacaccacaaa 28848
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 ggcgcgacgagatcgacatg 395 |||||||||||||||||||| Sbjct: 309165 ggcgcgacgagatcgacatg 309184
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 caacggcgacggcaagaagg 471 |||||||||||||||||||| Sbjct: 19838814 caacggcgacggcaagaagg 19838795
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 accagcaatccggcgccgcc 257 |||||||||||||||||||| Sbjct: 4666673 accagcaatccggcgccgcc 4666692
>dbj|AP001048.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1216G2, MX1-D21S171 region, complete sequence Length = 16588 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 accacacacaacacaccaca 20 |||||||||||||||||||| Sbjct: 7883 accacacacaacacaccaca 7902 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,255,383 Number of Sequences: 3902068 Number of extensions: 4255383 Number of successful extensions: 93165 Number of sequences better than 10.0: 148 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 91280 Number of HSP's gapped (non-prelim): 1869 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
