ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart22g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRN... 418 e-114
2dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, ... 416 e-113
3ref|XM_473757.1| Oryza sativa (japonica cultivar-group), predic... 315 8e-83
4dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 315 8e-83
5dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, compl... 315 8e-83
6dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRN... 315 8e-83
7gb|AY644465.1| Saccharum officinarum mitochondrial alternative o... 202 9e-49
8gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2... 182 8e-43
9gb|AY108791.1| Zea mays PCO108471 mRNA sequence 182 8e-43
10dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, ... 168 1e-38
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 163 7e-37
12dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and... 163 7e-37
13emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 163 7e-37
14gb|AY644467.1| Saccharum officinarum mitochondrial alternative o... 129 1e-26
15ref|XM_467319.1| Oryza sativa (japonica cultivar-group), mRNA 125 2e-25
16dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochond... 125 2e-25
17gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1... 109 1e-20
18gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, com... 100 9e-18
19gb|AY644466.1| Saccharum officinarum mitochondrial alternative o... 82 2e-12
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
21dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
22dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
23dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochond... 76 1e-10
24gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternativ... 66 1e-07
25dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabba... 64 5e-07
26gb|AY644468.1| Saccharum officinarum mitochondrial alternative o... 62 2e-06
27emb|AM167527.1| Cocos nucifera partial mRNA for mitocondrial alt... 58 3e-05
28ref|XM_473758.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
29dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
30dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRN... 56 1e-04
31gb|AY022796.1| Oryza sativa microsatellite MRG5121 containing (C... 54 5e-04
32gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxida... 52 0.002
33dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative ... 50 0.008
34gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic ge... 48 0.030
35gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondri... 48 0.030
36emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-ind... 48 0.030
37gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3... 48 0.030
38emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA 48 0.030
39gb|AY034149.1| Lycopersicon esculentum alternative oxidase 1b mR... 46 0.12
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
41dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
42dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.12
43dbj|AB009395.1| Catharanthus roseus mRNA for alternative oxidase... 46 0.12
44gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nic... 44 0.47
45dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 44 0.47
46dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 44 0.47
47dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alter... 44 0.47
48gb|AE017221.1| Thermus thermophilus HB27, complete genome 44 0.47
49ref|NM_188119.1| Oryza sativa (japonica cultivar-group), Ozsa855... 42 1.9
50ref|XM_475475.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
51gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 42 1.9
52gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondri... 42 1.9
53gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
54gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.9
55gb|AC110253.10| Mus musculus chromosome 5, clone RP23-270N2, com... 42 1.9
56ref|XM_757471.1| Ustilago maydis 521 hypothetical protein (UM064... 42 1.9
57gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17... 42 1.9
58gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, com... 42 1.9
59dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
60dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
61dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
62gb|AE004909.1| Pseudomonas aeruginosa PAO1, section 470 of 529 o... 42 1.9
63dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
64dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.9
65dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
66gb|M32239.1|STMSUBCB S.griseolus cytochrome P-450-SU2 (subC) and... 42 1.9
67dbj|AB003428.1| Pseudomonas aeruginosa parC gene for topoisomera... 42 1.9
68ref|XM_468710.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.4
69gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.4
70emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 7.4
71ref|XM_743076.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.4
72gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 7.4
73gb|AY929605.1| Uncultured sulfate-reducing bacterium clone GranD... 40 7.4
74emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 40 7.4
75gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 40 7.4
76gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.4
77ref|NM_205134.1| Gallus gallus nuclear factor of kappa light pol... 40 7.4
78emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, com... 40 7.4
79gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.4
80gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 7.4
81gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 7.4
82gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.4
83dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
84gb|AY088970.1| Arabidopsis thaliana clone 116257 mRNA, complete ... 40 7.4
85dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
86dbj|AK110839.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
87ref|XM_312237.2| Anopheles gambiae str. PEST ENSANGP00000010808 ... 40 7.4
88ref|NM_210402.1| Eremothecium gossypii AER191Wp (AER191W), mRNA 40 7.4
89emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.4
90dbj|AK065136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.4
91dbj|D13719.1|CHKNFKB1 Gallus gallus mRNA for NF-kB p50 subunit, ... 40 7.4
92dbj|AB008466.1| Streptomyces galilaeus aklavinone-aclacinomycin ... 40 7.4
93gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.4
94emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 40 7.4
95dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 7.4
96dbj|AB039379.1| Streptomyces aureofaciens tcsD, tcsE, tcsF, tcsG... 40 7.4
97emb|AL590462.1|CNS07EGJ DNA centromeric region sequence BAC 34F0... 40 7.4 
>gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRNA, partial cds; nuclear
           gene for mitochondrial product
          Length = 1100

 Score =  418 bits (211), Expect = e-114
 Identities = 242/251 (96%), Gaps = 1/251 (0%)
 Strand = Plus / Plus

                                                                       
Query: 297 ggcggccacgggcgacggggagaagaaggaggtggcgg-tcaacagctactgggggatcg 355
           |||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||||||
Sbjct: 31  ggcggccaagggcgacggggagaagaaggaggtggcgcatcagcagctactgggggatcg 90

                                                                       
Query: 356 agcagtcgaagaagctggtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggc 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  agcagtcgaagaagctggtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggc 150

                                                                       
Query: 416 catgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaaca 475
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 151 catgggagacgtacaccgcggacacgtcgatcgatccgaccaagcaccacgtgcccaaca 210

                                                                       
Query: 476 cgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacatct 535
           ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 211 cgatgctcgacaagatcgcctactacaccgtcaagtccctgcgcttccccaccgacatct 270

                      
Query: 536 ccttccagagg 546
            ||||||||||
Sbjct: 271 tcttccagagg 281
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>dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1119

 Score =  416 bits (210), Expect = e-113
 Identities = 240/250 (96%)
 Strand = Plus / Plus

                                                                       
Query: 297 ggcggccacgggcgacggggagaagaaggaggtggcggtcaacagctactgggggatcga 356
           |||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||||
Sbjct: 227 ggcggccaagggcgacggggagaagaaggaggtggccatcagcagctactgggggatcga 286

                                                                       
Query: 357 gcagtcgaagaagctggtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggcc 416
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tcagtcgaagaagctggtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggcc 346

                                                                       
Query: 417 atgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaacac 476
           |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 347 atgggagacgtacaccgctgacacgtcgatcgatctgaccaagcaccacgtgcccaacac 406

                                                                       
Query: 477 gatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacatctc 536
           |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| 
Sbjct: 407 gatgctcgacaagatcgcctactacaccgtcaagtccctgcgcttccccaccgacatctt 466

                     
Query: 537 cttccagagg 546
           ||||||||||
Sbjct: 467 cttccagagg 476



 Score =  283 bits (143), Expect = 3e-73
 Identities = 194/211 (91%)
 Strand = Plus / Plus

                                                                       
Query: 85  ttgtgattcgcggaggcgtttctcggcgcccagatgagctcccggatggccggatcggtc 144
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ttgtgattcgcggaggcgttcctcggcgcccagatgagctcccggatggccggatcggtc 62

                                                                       
Query: 145 ctcctccgccacgccggcgccggggccgaccgcctcttcgccaccacggcgtcccccgcg 204
           |||||||||| |||||||||||| |||| |||||||||||||||||| |||||||| |||
Sbjct: 63  ctcctccgccgcgccggcgccggcgccggccgcctcttcgccaccaccgcgtccccggcg 122

                                                                       
Query: 205 gccaggaccgccctcgccggcggcgagggtgcgtgggcgcggatgatgtccacgtccgcg 264
           ||||||||||||||||  || || | ||| ||||||| ||||||||||||||| ||||||
Sbjct: 123 gccaggaccgccctcggtggaggtgggggcgcgtgggtgcggatgatgtccacctccgcg 182

                                          
Query: 265 gcctcgcacgccaaggacgaggcggccaagg 295
           |||||||| | |||||| |||||||||||||
Sbjct: 183 gcctcgcaggtcaaggatgaggcggccaagg 213
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>ref|XM_473757.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 999

 Score =  315 bits (159), Expect = 8e-83
 Identities = 210/227 (92%)
 Strand = Plus / Plus

                                                                       
Query: 320 agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
           |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 227 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 286

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 287 aggacggcacggagtggaagtggtcttgctttaggccatgggagacctacaccgcggaca 346

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           | ||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 347 cttcgatcgatctgacgaagcaccacgtgcccaagacgctgctcgacaagatcgcctact 406

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             |||||||||||||| ||||||||||| || |||| ||||||||||
Sbjct: 407 ggaccgtcaagtcgctgcgcttccccactgatatcttcttccagagg 453



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 118 atgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
           |||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 1   atgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 46
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>dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C12, full
           insert sequence
          Length = 1471

 Score =  315 bits (159), Expect = 8e-83
 Identities = 210/227 (92%)
 Strand = Plus / Plus

                                                                       
Query: 320 agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
           |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 330 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 389

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 390 aggacggcacggagtggaagtggtcttgctttaggccatgggagacctacaccgcggaca 449

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           | ||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 450 cttcgatcgatctgacgaagcaccacgtgcccaagacgctgctcgacaagatcgcctact 509

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             |||||||||||||| ||||||||||| || |||| ||||||||||
Sbjct: 510 ggaccgtcaagtcgctgcgcttccccactgatatcttcttccagagg 556



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
           ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 103 gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 149
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>dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, complete cds
          Length = 1256

 Score =  315 bits (159), Expect = 8e-83
 Identities = 210/227 (92%)
 Strand = Plus / Plus

                                                                       
Query: 320 agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
           |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 311 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 370

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 371 aggacggcacggagtggaagtggtcttgctttaggccatgggagacctacaccgcggaca 430

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           | ||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 431 cttcgatcgatctgacgaagcaccacgtgcccaagacgctgctcgacaagatcgcctact 490

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             |||||||||||||| ||||||||||| || |||| ||||||||||
Sbjct: 491 ggaccgtcaagtcgctgcgcttccccactgatatcttcttccagagg 537



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
           ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 84  gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 130
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>dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRNA for alternative
           oxidase, complete cds
          Length = 1459

 Score =  315 bits (159), Expect = 8e-83
 Identities = 210/227 (92%)
 Strand = Plus / Plus

                                                                       
Query: 320 agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
           |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 318 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 377

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           |||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 378 aggacggcacggagtggaagtggtcttgctttaggccatgggagacctacaccgcggaca 437

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           | ||||||||||| || ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 438 cttcgatcgatctgacgaagcaccacgtgcccaagacgctgctcgacaagatcgcctact 497

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             |||||||||||||| ||||||||||| || |||| ||||||||||
Sbjct: 498 ggaccgtcaagtcgctgcgcttccccactgatatcttcttccagagg 544



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
           ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 91  gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 137
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>gb|AY644465.1| Saccharum officinarum mitochondrial alternative oxidase 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1316

 Score =  202 bits (102), Expect = 9e-49
 Identities = 201/234 (85%)
 Strand = Plus / Plus

                                                                       
Query: 313 ggggagaagaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctg 372
           ||||| ||||||| ||||| | |||||||||||||||||||||||||    || ||||||
Sbjct: 313 ggggacaagaaggcggtggtgatcaacagctactgggggatcgagcaaaacaacaagctg 372

                                                                       
Query: 373 gtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacacc 432
           ||||| || |||||||| |||||||||||| ||||||| |||||||||||||||||||| 
Sbjct: 373 gtgcgggacgacggcacggagtggaagtggacttgctttaggccatgggagacgtacacg 432

                                                                       
Query: 433 gcggacacgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatc 492
           ||||||||||| || || ||||||| |||||| | || ||| ||| || | || ||||||
Sbjct: 433 gcggacacgtccattgacctcaccaggcaccatgagctcaagacgctgatggataagatc 492

                                                                 
Query: 493 gcctactacaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
           || ||||  |||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 493 gcatactggaccgtcaagtcgctacgcttccccacggacatcttcttccagagg 546



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 41/46 (89%), Gaps = 3/46 (6%)
 Strand = Plus / Plus

                                                         
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggc 162
           |||||||||||||   |||||||| ||||||||||||| |||||||
Sbjct: 99  gatgagctcccgg---gccggatccgtcctcctccgccgcgccggc 141
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>gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2) mRNA, nuclear
           gene encoding mitochondrial protein, complete cds~~
          Length = 1456

 Score =  182 bits (92), Expect = 8e-43
 Identities = 194/228 (85%)
 Strand = Plus / Plus

                                                                       
Query: 319 aagaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgc 378
           ||||||| ||||| | |||||||||||||||||||||||||    || ||||| | ||| 
Sbjct: 324 aagaaggcggtggtgatcaacagctactgggggatcgagcaaaacaacaagctagcgcgg 383

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           || ||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 384 gacgacggcaccgagtggaagtggacttgctttaggccatgggagacgtacacggcggac 443

                                                                       
Query: 439 acgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctac 498
           ||||| || || |||||||  ||||| | |||||| ||| || | || ||| |||| |||
Sbjct: 444 acgtccattgacctcaccagacaccatgagcccaagacgctgatggataaggtcgcatac 503

                                                           
Query: 499 tacaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
           |  |||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 504 tggaccgtcaagtcgctgcgcttccccacggacatcttcttccagagg 551



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 41/46 (89%), Gaps = 3/46 (6%)
 Strand = Plus / Plus

                                                         
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggc 162
           |||||||||||||   ||||||||  ||||||||||||||||||||
Sbjct: 110 gatgagctcccgg---gccggatccatcctcctccgccacgccggc 152
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>gb|AY108791.1| Zea mays PCO108471 mRNA sequence
          Length = 1415

 Score =  182 bits (92), Expect = 8e-43
 Identities = 194/228 (85%)
 Strand = Plus / Plus

                                                                       
Query: 319 aagaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgc 378
           ||||||| ||||| | |||||||||||||||||||||||||    || ||||| | ||| 
Sbjct: 337 aagaaggcggtggtgatcaacagctactgggggatcgagcaaaacaacaagctagcgcgg 396

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           || ||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||
Sbjct: 397 gacgacggcaccgagtggaagtggacttgctttaggccatgggagacgtacacggcggac 456

                                                                       
Query: 439 acgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctac 498
           ||||| || || |||||||  ||||| | |||||| ||| || | || ||| |||| |||
Sbjct: 457 acgtccattgacctcaccagacaccatgagcccaagacgctgatggataaggtcgcatac 516

                                                           
Query: 499 tacaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
           |  |||||||||||||| ||||||||||| ||||||| ||||||||||
Sbjct: 517 tggaccgtcaagtcgctgcgcttccccacggacatcttcttccagagg 564



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 41/46 (89%), Gaps = 3/46 (6%)
 Strand = Plus / Plus

                                                         
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggc 162
           |||||||||||||   ||||||||  ||||||||||||||||||||
Sbjct: 123 gatgagctcccgg---gccggatccatcctcctccgccacgccggc 165
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>dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1136

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Plus

                                                                       
Query: 367 aagctggtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacg 426
           |||||||||  | |||||||| |||||||||||||||||||||||||||| |||||| ||
Sbjct: 387 aagctggtgaacaaggacggcgccgagtggaagtggtcttgcttcaggccgtgggaggcg 446

                                                                       
Query: 427 tacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgac 486
           |||||  |||||||| | ||||||||| |||||||||||  ||||||   | ||||||||
Sbjct: 447 tacacgtcggacacgaccatcgatctctccaagcaccacaagcccaaggtgctgctcgac 506

                                                                    
Query: 487 aagatcgcctactacaccgtcaagtcgctccgcttccccaccgacatctccttccag 543
           |||||||||||||  |||||||||||||| ||| | ||||||||||||| |||||||
Sbjct: 507 aagatcgcctactggaccgtcaagtcgctgcgcgtgcccaccgacatcttcttccag 563



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccac 156
           ||||||||||||  | |||||||| |||||||||||||||
Sbjct: 68  gatgagctcccgcgtcgccggatccgtcctcctccgccac 107
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  163 bits (82), Expect = 7e-37
 Identities = 118/130 (90%)
 Strand = Plus / Minus

                                                                            
Query: 414      gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
                |||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 30323279 gccatgggagacctacaccgcggacacttcgatcgatctgacgaagcaccacgtgcccaa 30323220

                                                                            
Query: 474      cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
                 ||| |||||||||||||||||||||  |||||||||||||| ||||||||||| || ||
Sbjct: 30323219 gacgctgctcgacaagatcgcctactggaccgtcaagtcgctgcgcttccccactgatat 30323160

                          
Query: 534      ctccttccag 543
                || |||||||
Sbjct: 30323159 cttcttccag 30323150



 Score =  149 bits (75), Expect = 1e-32
 Identities = 87/91 (95%)
 Strand = Plus / Minus

                                                                            
Query: 320      agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
                |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 30323532 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 30323473

                                               
Query: 380      aggacggcaccgagtggaagtggtcttgctt 410
                |||||||||| ||||||||||||||||||||
Sbjct: 30323472 aggacggcacggagtggaagtggtcttgctt 30323442



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 117      gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
                ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 30323759 gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 30323713



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 414      gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacg 466
                ||||||||| ||||||||  ||||||||||||||||  | || ||||||||||
Sbjct: 30326455 gccatgggacacgtacacgtcggacacgtcgatcgacgtgacgaagcaccacg 30326403
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>dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and AOX1a genes,
            complete cds
          Length = 7421

 Score =  163 bits (82), Expect = 7e-37
 Identities = 118/130 (90%)
 Strand = Plus / Plus

                                                                        
Query: 414  gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
            |||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 5010 gccatgggagacctacaccgcggacacttcgatcgatctgacgaagcaccacgtgcccaa 5069

                                                                        
Query: 474  cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
             ||| |||||||||||||||||||||  |||||||||||||| ||||||||||| || ||
Sbjct: 5070 gacgctgctcgacaagatcgcctactggaccgtcaagtcgctgcgcttccccactgatat 5129

                      
Query: 534  ctccttccag 543
            || |||||||
Sbjct: 5130 cttcttccag 5139



 Score =  149 bits (75), Expect = 1e-32
 Identities = 87/91 (95%)
 Strand = Plus / Plus

                                                                        
Query: 320  agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
            |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 4757 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 4816

                                           
Query: 380  aggacggcaccgagtggaagtggtcttgctt 410
            |||||||||| ||||||||||||||||||||
Sbjct: 4817 aggacggcacggagtggaagtggtcttgctt 4847



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 117  gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
            ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 4530 gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 4576



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                 
Query: 414  gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacg 466
            ||||||||| ||||||||  ||||||||||||||||  | || ||||||||||
Sbjct: 1834 gccatgggacacgtacacgtcggacacgtcgatcgacgtgacgaagcaccacg 1886
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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
             complete sequence
          Length = 160989

 Score =  163 bits (82), Expect = 7e-37
 Identities = 118/130 (90%)
 Strand = Plus / Minus

                                                                         
Query: 414   gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
             |||||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 73175 gccatgggagacctacaccgcggacacttcgatcgatctgacgaagcaccacgtgcccaa 73116

                                                                         
Query: 474   cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
              ||| |||||||||||||||||||||  |||||||||||||| ||||||||||| || ||
Sbjct: 73115 gacgctgctcgacaagatcgcctactggaccgtcaagtcgctgcgcttccccactgatat 73056

                       
Query: 534   ctccttccag 543
             || |||||||
Sbjct: 73055 cttcttccag 73046



 Score =  149 bits (75), Expect = 1e-32
 Identities = 87/91 (95%)
 Strand = Plus / Minus

                                                                         
Query: 320   agaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgcg 379
             |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 73428 agaaggaggtggtggtcaacagctactggggcatcgagcagtcgaagaagctggtgcggg 73369

                                            
Query: 380   aggacggcaccgagtggaagtggtcttgctt 410
             |||||||||| ||||||||||||||||||||
Sbjct: 73368 aggacggcacggagtggaagtggtcttgctt 73338



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 117   gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
             ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 73655 gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 73609



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 414   gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacg 466
             ||||||||| ||||||||  ||||||||||||||||  | || ||||||||||
Sbjct: 76351 gccatgggacacgtacacgtcggacacgtcgatcgacgtgacgaagcaccacg 76299
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>gb|AY644467.1| Saccharum officinarum mitochondrial alternative oxidase 1c mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1189

 Score =  129 bits (65), Expect = 1e-26
 Identities = 152/181 (83%)
 Strand = Plus / Plus

                                                                       
Query: 366 gaagctggtgcgcgaggacggcaccgagtggaagtggtcttgcttcaggccatgggagac 425
           ||||||| || || ||||||||  |||||||| ||||||||||||||||||||||||| |
Sbjct: 229 gaagctgatgagcaaggacggcgtcgagtggaggtggtcttgcttcaggccatgggaggc 288

                                                                       
Query: 426 gtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcga 485
           |||||   ||||||| |||||||||||||||| ||||||||  |||||   | |||||||
Sbjct: 289 gtacaagccggacacctcgatcgatctcaccaggcaccacgaacccaaggtgctgctcga 348

                                                                       
Query: 486 caagatcgcctactacaccgtcaagtcgctccgcttccccaccgacatctccttccagag 545
           |||||||||||| |  |||||||| | ||| ||| | ||||||||||| |  ||||||||
Sbjct: 349 caagatcgcctattggaccgtcaaattgctgcgcgtgcccaccgacatatttttccagag 408

            
Query: 546 g 546
           |
Sbjct: 409 g 409
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>ref|XM_467319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score =  125 bits (63), Expect = 2e-25
 Identities = 141/167 (84%)
 Strand = Plus / Plus

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           ||||||||  |||||||||||||||||||||||| ||||||||||||||| |  ||||||
Sbjct: 326 aggacggcgtcgagtggaagtggtcttgcttcagaccatgggagacgtactcgccggaca 385

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           || ||||||| || |  |||||||||| ||| ||   | ||||||||||| |||||||||
Sbjct: 386 cgacgatcgacctgaagaagcaccacgagccgaaggtgctgctcgacaaggtcgcctact 445

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             ||||||||| |||| ||| | ||||| ||||||| ||||||||||
Sbjct: 446 ggaccgtcaaggcgctgcgcgtgcccactgacatcttcttccagagg 492
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>dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c mRNA for
           alternative oxidase 1c, complete cds
          Length = 1088

 Score =  125 bits (63), Expect = 2e-25
 Identities = 141/167 (84%)
 Strand = Plus / Plus

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           ||||||||  |||||||||||||||||||||||| ||||||||||||||| |  ||||||
Sbjct: 359 aggacggcgtcgagtggaagtggtcttgcttcagaccatgggagacgtactcgccggaca 418

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           || ||||||| || |  |||||||||| ||| ||   | ||||||||||| |||||||||
Sbjct: 419 cgacgatcgacctgaagaagcaccacgagccgaaggtgctgctcgacaaggtcgcctact 478

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             ||||||||| |||| ||| | ||||| ||||||| ||||||||||
Sbjct: 479 ggaccgtcaaggcgctgcgcgtgcccactgacatcttcttccagagg 525
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>gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1) mRNA, nuclear
           gene encoding mitochondrial protein, complete cds
          Length = 1519

 Score =  109 bits (55), Expect = 1e-20
 Identities = 139/167 (83%)
 Strand = Plus / Plus

                                                                       
Query: 380 aggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggaca 439
           |||||||| ||||||||| ||||||||||||||||||||||||| ||||||   ||||||
Sbjct: 455 aggacggcgccgagtggaggtggtcttgcttcaggccatgggaggcgtacaagccggaca 514

                                                                       
Query: 440 cgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctact 499
           |  |||||||||||| ||  |||||||  |||||   | ||||||||||||||||||| |
Sbjct: 515 ccacgatcgatctcaacagacaccacgaacccaaggtgctgctcgacaagatcgcctatt 574

                                                          
Query: 500 acaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
             |||||||| |  || ||| | ||||||||||| | ||||||||||
Sbjct: 575 ggaccgtcaaattactgcgcgtgcccaccgacatattcttccagagg 621
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>gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, complete cds
          Length = 3361

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 110/130 (84%)
 Strand = Plus / Plus

                                                                        
Query: 414  gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
            |||||||||||||||||| ||||||||||| || || |||||||  ||||| | ||||||
Sbjct: 1201 gccatgggagacgtacacggcggacacgtccattgacctcaccagacaccatgagcccaa 1260

                                                                        
Query: 474  cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
             ||| || | || ||| |||| ||||  |||||||||||||| ||||||||||| |||||
Sbjct: 1261 gacgctgatggataaggtcgcatactggaccgtcaagtcgctgcgcttccccacggacat 1320

                      
Query: 534  ctccttccag 543
            || |||||||
Sbjct: 1321 cttcttccag 1330



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                        
Query: 319  aagaaggaggtggcggtcaacagctactgggggatcgagcagtcgaagaagctggtgcgc 378
            ||||||| ||||| | |||||||||||||||||||||||||    || ||||| | ||| 
Sbjct: 977  aagaaggcggtggtgatcaacagctactgggggatcgagcaaaacaacaagctagcgcgg 1036

                                            
Query: 379  gaggacggcaccgagtggaagtggtcttgctt 410
            || ||||||||||||||||||||| |||||||
Sbjct: 1037 gacgacggcaccgagtggaagtggacttgctt 1068



 Score = 48.1 bits (24), Expect = 0.030
 Identities = 41/46 (89%), Gaps = 3/46 (6%)
 Strand = Plus / Plus

                                                         
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggc 162
           |||||||||||||   ||||||||  ||||||||||||||||||||
Sbjct: 763 gatgagctcccgg---gccggatccatcctcctccgccacgccggc 805
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>gb|AY644466.1| Saccharum officinarum mitochondrial alternative oxidase 1b mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 989

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 101/121 (83%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||||| ||||||| |||||  ||||||||||||||||| |||||||  || |||
Sbjct: 164 gaggacggcacggagtggaggtggttctgcttcaggccatgggacacgtacagagctgac 223

                                                                       
Query: 439 acgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctac 498
           |||||||||||  | |  |||||||||| ||| ||  || ||||||||||| | ||||||
Sbjct: 224 acgtcgatcgacatgaagaagcaccacgagccgaaggcgctgctcgacaagctggcctac 283

            
Query: 499 t 499
           |
Sbjct: 284 t 284
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 107/130 (82%)
 Strand = Plus / Minus

                                                                            
Query: 414      gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
                |||||||||||||||| |  |||||||| ||||||| || |  |||||||||| ||| ||
Sbjct: 28832053 gccatgggagacgtactcgccggacacgacgatcgacctgaagaagcaccacgagccgaa 28831994

                                                                            
Query: 474      cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
                   | ||||||||||| |||||||||  ||||||||| |||| ||| | ||||| |||||
Sbjct: 28831993 ggtgctgctcgacaaggtcgcctactggaccgtcaaggcgctgcgcgtgcccactgacat 28831934

                          
Query: 534      ctccttccag 543
                || |||||||
Sbjct: 28831933 cttcttccag 28831924



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                  
Query: 380      aggacggcaccgagtggaagtggtcttgcttcag 413
                ||||||||  ||||||||||||||||||||||||
Sbjct: 28832213 aggacggcgtcgagtggaagtggtcttgcttcag 28832180
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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0459B01
          Length = 163087

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 107/130 (82%)
 Strand = Plus / Minus

                                                                          
Query: 414    gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
              |||||||||||||||| |  |||||||| ||||||| || |  |||||||||| ||| ||
Sbjct: 148626 gccatgggagacgtactcgccggacacgacgatcgacctgaagaagcaccacgagccgaa 148567

                                                                          
Query: 474    cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
                 | ||||||||||| |||||||||  ||||||||| |||| ||| | ||||| |||||
Sbjct: 148566 ggtgctgctcgacaaggtcgcctactggaccgtcaaggcgctgcgcgtgcccactgacat 148507

                        
Query: 534    ctccttccag 543
              || |||||||
Sbjct: 148506 cttcttccag 148497



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                                
Query: 380    aggacggcaccgagtggaagtggtcttgcttcag 413
              ||||||||  ||||||||||||||||||||||||
Sbjct: 148786 aggacggcgtcgagtggaagtggtcttgcttcag 148753
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_E07
          Length = 123613

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 107/130 (82%)
 Strand = Plus / Minus

                                                                         
Query: 414   gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
             |||||||||||||||| |  |||||||| ||||||| || |  |||||||||| ||| ||
Sbjct: 24745 gccatgggagacgtactcgccggacacgacgatcgacctgaagaagcaccacgagccgaa 24686

                                                                         
Query: 474   cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
                | ||||||||||| |||||||||  ||||||||| |||| ||| | ||||| |||||
Sbjct: 24685 ggtgctgctcgacaaggtcgcctactggaccgtcaaggcgctgcgcgtgcccactgacat 24626

                       
Query: 534   ctccttccag 543
             || |||||||
Sbjct: 24625 cttcttccag 24616



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                               
Query: 380   aggacggcaccgagtggaagtggtcttgcttcag 413
             ||||||||  ||||||||||||||||||||||||
Sbjct: 24905 aggacggcgtcgagtggaagtggtcttgcttcag 24872
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>dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c gene for
            alternative oxidase 1c, complete cds
          Length = 2674

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 107/130 (82%)
 Strand = Plus / Plus

                                                                        
Query: 414  gccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccacgtgcccaa 473
            |||||||||||||||| |  |||||||| ||||||| || |  |||||||||| ||| ||
Sbjct: 1044 gccatgggagacgtactcgccggacacgacgatcgacctgaagaagcaccacgagccgaa 1103

                                                                        
Query: 474  cacgatgctcgacaagatcgcctactacaccgtcaagtcgctccgcttccccaccgacat 533
               | ||||||||||| |||||||||  ||||||||| |||| ||| | ||||| |||||
Sbjct: 1104 ggtgctgctcgacaaggtcgcctactggaccgtcaaggcgctgcgcgtgcccactgacat 1163

                      
Query: 534  ctccttccag 543
            || |||||||
Sbjct: 1164 cttcttccag 1173



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 380 aggacggcaccgagtggaagtggtcttgcttcag 413
           ||||||||  ||||||||||||||||||||||||
Sbjct: 884 aggacggcgtcgagtggaagtggtcttgcttcag 917
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>gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternative oxidase protein
          Length = 1404

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 132/165 (80%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||| ||||||||   ||| | ||||||||||||||||||||||||   ||||||
Sbjct: 410 gaggacggctccgagtggcgctggacctgcttcaggccatgggagacgtaccaggcggac 469

                                                                       
Query: 439 acgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctac 498
              || ||||| ||   |||||||||||| |||| ||| || ||||||||| | ||||  
Sbjct: 470 ctctccatcgacctgcacaagcaccacgtccccaccaccattctcgacaagctggccttg 529

                                                        
Query: 499 tacaccgtcaagtcgctccgcttccccaccgacatctccttccag 543
             |||||||||| | ||||| |  ||||||||||||| |||||||
Sbjct: 530 cgcaccgtcaaggccctccggtggcccaccgacatcttcttccag 574
to top
>dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabbage alternative
           oxidase, complete cds
          Length = 1233

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 134/168 (79%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||| ||||||||   ||||| ||||| ||||||||||||||||||   ||||||
Sbjct: 439 gaggacggctccgagtggcgctggtcctgctttaggccatgggagacgtacgaggcggac 498

                                                                       
Query: 439 acgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctac 498
             |||||||||||| |  || |||||||  |||| |||  | || |||||| | |||| |
Sbjct: 499 ctgtcgatcgatctgaagaaacaccacgcccccaccaccttcctggacaagctggccttc 558

                                                           
Query: 499 tacaccgtcaagtcgctccgcttccccaccgacatctccttccagagg 546
           |  |||||||| || ||||| | |||||||||  ||| ||||||||||
Sbjct: 559 tggaccgtcaaatctctccgttaccccaccgatgtcttcttccagagg 606
to top
>gb|AY644468.1| Saccharum officinarum mitochondrial alternative oxidase 1d mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1108

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||||| |||||||||||| | |||||| |||| |||||  |||||||  |||||
Sbjct: 167 gaggacggcacggagtggaagtggccctgcttccggccgtgggacgcgtacacgtcggac 226

                      
Query: 439 acgtcgatcga 449
           ||||| |||||
Sbjct: 227 acgtccatcga 237
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>emb|AM167527.1| Cocos nucifera partial mRNA for mitocondrial alternative oxidase
           (CLM gene)
          Length = 192

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           |||||||||||||||||||||||| | || || | |||||||||  | |||||  || ||
Sbjct: 64  gaggacggcaccgagtggaagtggccatgttttaagccatgggattcatacacatcgaac 123

                                        
Query: 439 acgtcgatcgatctcaccaagcaccacgt 467
             |||||||||||||  ||||||||||||
Sbjct: 124 cagtcgatcgatctccacaagcaccacgt 152
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>ref|XM_473758.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||||| || |||||||||    | || ||||||||||| ||||||||  |||||
Sbjct: 295 gaggacggcacggaatggaagtggctcagttttaggccatgggacacgtacacgtcggac 354

                                       
Query: 439 acgtcgatcgatctcaccaagcaccacg 466
           |||||||||||  | || ||||||||||
Sbjct: 355 acgtcgatcgacgtgacgaagcaccacg 382
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>dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B09, full
           insert sequence
          Length = 1360

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||||| || |||||||||    | || ||||||||||| ||||||||  |||||
Sbjct: 442 gaggacggcacggaatggaagtggctcagttttaggccatgggacacgtacacgtcggac 501

                                       
Query: 439 acgtcgatcgatctcaccaagcaccacg 466
           |||||||||||  | || ||||||||||
Sbjct: 502 acgtcgatcgacgtgacgaagcaccacg 529
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>dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRNA for alternative
           oxidase, complete cds
          Length = 1343

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||||| || |||||||||    | || ||||||||||| ||||||||  |||||
Sbjct: 427 gaggacggcacggaatggaagtggctcagttttaggccatgggacacgtacacgtcggac 486

                                       
Query: 439 acgtcgatcgatctcaccaagcaccacg 466
           |||||||||||  | || ||||||||||
Sbjct: 487 acgtcgatcgacgtgacgaagcaccacg 514
to top
>gb|AY022796.1| Oryza sativa microsatellite MRG5121 containing (CGC)X8, closest to
           marker S2486, genomic sequence
          Length = 224

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 117 gatgagctcccggatggccggatcggtcctcctccgccacgccggcg 163
           ||||||||||||||||||||||||||   ||||||| |||| |||||
Sbjct: 206 gatgagctcccggatggccggatcggcgatcctccgtcacgtcggcg 160
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>gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxidase 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 951

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 385 ggcaccgagtggaagtggtcttgcttcaggccatgggagacgtaca 430
           ||||| ||||||||||||  |||||| |||||||||||||| ||||
Sbjct: 244 ggcacagagtggaagtggaattgctttaggccatgggagacataca 289
to top
>dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative oxidase, complete
           cds
          Length = 1372

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 130/165 (78%)
 Strand = Plus / Plus

                                                                       
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggac 438
           ||||||||| ||||||||   ||| | ||||||||||||||||| ||||||   ||||||
Sbjct: 437 gaggacggctccgagtggcgctggacctgcttcaggccatgggacacgtaccaggcggac 496

                                                                       
Query: 439 acgtcgatcgatctcaccaagcaccacgtgcccaacacgatgctcgacaagatcgcctac 498
              || ||||| ||    ||||||||||  |||| ||| || ||||||||| | ||||  
Sbjct: 497 ctctccatcgacctgcagaagcaccacgcccccaccaccatcctcgacaagctggccttg 556

                                                        
Query: 499 tacaccgtcaagtcgctccgcttccccaccgacatctccttccag 543
           | |||||||||| | ||||| |  ||||||||||||| |||||||
Sbjct: 557 tgcaccgtcaaggccctccggtggcccaccgacatcttcttccag 601
to top
>gb|AF357202.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, complete
             sequence
          Length = 113193

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 199   cccgcggccaggaccgccctcgccggcg 226
             |||| |||||||||||||||||||||||
Sbjct: 28454 cccgaggccaggaccgccctcgccggcg 28481
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>gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
           oxidase (AOX2) mRNA, complete cds
          Length = 1278

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtaca 430
           |||||||| || || ||||| |||  |||||| |||||||||||||||||||
Sbjct: 450 gaggacggtactgaatggaaatggaattgctttaggccatgggagacgtaca 501
to top
>emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-inducible alternative oxidase
          Length = 3584

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                        
Query: 456  caagcaccacgtgcccaacacgatgctcgacaagatcgcctactacaccgtcaagtcgct 515
            |||||||||||| |||| ||| || ||||||||| | ||||    |||||||||| | ||
Sbjct: 2155 caagcaccacgtccccaccaccattctcgacaagctggccttgcgcaccgtcaaggccct 2214

                                        
Query: 516  ccgcttccccaccgacatctccttccag 543
            ||| |  ||||||||||||| |||||||
Sbjct: 2215 ccggtggcccaccgacatcttcttccag 2242
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>gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3) mRNA, nuclear
           gene encoding mitochondrial protein, complete cds~~
          Length = 1397

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 382 gacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtacaccgcggacacg 441
           |||||||| |||||||||||| |  ||||| |||| |||||  |||||||  ||||||||
Sbjct: 448 gacggcacggagtggaagtggaccagcttccggccgtgggacgcgtacacgtcggacacg 507

                   
Query: 442 tcgatcga 449
           || |||||
Sbjct: 508 tccatcga 515
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>emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA
          Length = 1134

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                               
Query: 379 gaggacggcaccgagtggaagtggtcttgcttcaggccatgggagacgtaca 430
           |||||||| || || ||||| |||  |||||| |||||||||||||||||||
Sbjct: 216 gaggacggtactgaatggaaatggaattgctttaggccatgggagacgtaca 267
to top
>gb|AY034149.1| Lycopersicon esculentum alternative oxidase 1b mRNA, complete cds
          Length = 986

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 407 gcttcaggccatgggagacgtac 429
           |||||||||||||||||||||||
Sbjct: 301 gcttcaggccatgggagacgtac 323
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 219     cgccggcggcgagggtgcgtgggcgcg 245
               ||||||||||||||||| |||||||||
Sbjct: 6788935 cgccggcggcgagggtgagtgggcgcg 6788909



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 144     cctcctccgccacgccggcgccggggccg 172
               |||||||| ||||||||||||||| ||||
Sbjct: 9862493 cctcctcctccacgccggcgccggcgccg 9862465
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>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0443E05
          Length = 176935

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 219    cgccggcggcgagggtgcgtgggcgcg 245
              ||||||||||||||||| |||||||||
Sbjct: 141087 cgccggcggcgagggtgagtgggcgcg 141061
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>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0417G05
          Length = 147803

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 219   cgccggcggcgagggtgcgtgggcgcg 245
             ||||||||||||||||| |||||||||
Sbjct: 70996 cgccggcggcgagggtgagtgggcgcg 70970
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>dbj|AB009395.1| Catharanthus roseus mRNA for alternative oxidase, complete cds
          Length = 1405

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 404 cttgcttcaggccatgggagacgtaca 430
           ||||||| |||||||||||||||||||
Sbjct: 478 cttgctttaggccatgggagacgtaca 504
to top
>gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nicotiana
           tabacum=tobacco, cv Bright Yellow, suspension cells,
           mRNA, 1408 nt]
          Length = 1408

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 405 ttgcttcaggccatgggagacgtaca 430
           |||||| |||||||||||||||||||
Sbjct: 445 ttgctttaggccatgggagacgtaca 470
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 166    ggggccgaccgcctcttcgcca 187
              ||||||||||||||||||||||
Sbjct: 684692 ggggccgaccgcctcttcgcca 684713
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 369    gctggtgcgcgaggacggcacc 390
              ||||||||||||||||||||||
Sbjct: 643871 gctggtgcgcgaggacggcacc 643850
to top
>dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alternative oxidase,
           complete cds
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 70/86 (81%)
 Strand = Plus / Plus

                                                                       
Query: 406 tgcttcaggccatgggagacgtacaccgcggacacgtcgatcgatctcaccaagcaccac 465
           |||||||||||||||||| |||||   ||||||  ||||||||| || |  |||||||||
Sbjct: 418 tgcttcaggccatgggaggcgtacgaggcggacctgtcgatcgacctgaagaagcaccac 477

                                     
Query: 466 gtgcccaacacgatgctcgacaagat 491
           |  |||| |||  | |||||||||||
Sbjct: 478 gcccccaccaccttcctcgacaagat 503
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 166    ggggccgaccgcctcttcgcca 187
              ||||||||||||||||||||||
Sbjct: 355325 ggggccgaccgcctcttcgcca 355346
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>ref|NM_188119.1| Oryza sativa (japonica cultivar-group), Ozsa8551 predicted mRNA
          Length = 2388

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 144 cctcctccgccacgccggcgccggggccg 172
           |||||||| ||||||||||||||| ||||
Sbjct: 154 cctcctcctccacgccggcgccggcgccg 126
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>ref|XM_475475.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 147 cctccgccacgccggcgccgg 167
           |||||||||||||||||||||
Sbjct: 529 cctccgccacgccggcgccgg 509
to top
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 280    gacgaggcggccaaggcggcggcca 304
              |||||||| ||||||||||||||||
Sbjct: 191535 gacgaggcagccaaggcggcggcca 191559
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>gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
           oxidase (AOX1) mRNA, complete cds
          Length = 1420

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 406 tgcttcaggccatgggagacgtaca 430
           ||||| |||||||||||||||||||
Sbjct: 465 tgctttaggccatgggagacgtaca 489
to top
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    cctccgccacgccggcgccgg 167
              |||||||||||||||||||||
Sbjct: 179137 cctccgccacgccggcgccgg 179117
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 150      ccgccacgccggcgccggggccgac 174
                |||||||||||||||||| ||||||
Sbjct: 32287379 ccgccacgccggcgccggcgccgac 32287355



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 212      ccgccctcgccggcggcgag 231
                ||||||||||||||||||||
Sbjct: 17153961 ccgccctcgccggcggcgag 17153942
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>gb|AC110253.10| Mus musculus chromosome 5, clone RP23-270N2, complete sequence
          Length = 224182

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 300    ggccacgggcgacggggagaagaaggagg 328
              |||||||||| ||||||||||| ||||||
Sbjct: 147524 ggccacgggccacggggagaagcaggagg 147552
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>ref|XM_757471.1| Ustilago maydis 521 hypothetical protein (UM06417.1) partial mRNA
          Length = 918

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 278 aggacgaggcggccaaggcgg 298
           |||||||||||||||||||||
Sbjct: 103 aggacgaggcggccaaggcgg 83
to top
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence
          Length = 102751

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 150   ccgccacgccggcgccggggccgac 174
             |||||||||||||||||| ||||||
Sbjct: 21146 ccgccacgccggcgccggcgccgac 21122
to top
>gb|AC117602.9| Mus musculus chromosome 5, clone RP23-462C22, complete sequence
          Length = 205604

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 300   ggccacgggcgacggggagaagaaggagg 328
             |||||||||| ||||||||||| ||||||
Sbjct: 38919 ggccacgggccacggggagaagcaggagg 38947
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 314     gggagaagaaggaggtggcgg 334
               |||||||||||||||||||||
Sbjct: 6056159 gggagaagaaggaggtggcgg 6056139
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 147      cctccgccacgccggcgccgg 167
                |||||||||||||||||||||
Sbjct: 24110648 cctccgccacgccggcgccgg 24110628
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 150      ccgccacgccggcgccggggccgac 174
                |||||||||||||||||| ||||||
Sbjct: 32377889 ccgccacgccggcgccggcgccgac 32377865



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 212      ccgccctcgccggcggcgag 231
                ||||||||||||||||||||
Sbjct: 17147530 ccgccctcgccggcggcgag 17147511
to top
>gb|AE004909.1| Pseudomonas aeruginosa PAO1, section 470 of 529 of the complete
            genome
          Length = 11063

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 363  gaagaagctggtgcgcgagga 383
            |||||||||||||||||||||
Sbjct: 5514 gaagaagctggtgcgcgagga 5494
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 144    cctcctccgccacgccggcgccggggccg 172
              |||||||| ||||||||||||||| ||||
Sbjct: 126743 cctcctcctccacgccggcgccggcgccg 126715
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 182     tcgccaccacggcgtcccccg 202
               |||||||||||||||||||||
Sbjct: 3230286 tcgccaccacggcgtcccccg 3230266
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>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0008C11
          Length = 157205

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    gggagaagaaggaggtggcgg 334
              |||||||||||||||||||||
Sbjct: 111329 gggagaagaaggaggtggcgg 111309
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>gb|M32239.1|STMSUBCB S.griseolus cytochrome P-450-SU2 (subC) and ferredoxin-2 (subB)
            genes, complete cds
          Length = 1688

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 213  cgccctcgccggcggcgagggtgcg 237
            |||||||||||||||||| ||||||
Sbjct: 1131 cgccctcgccggcggcgatggtgcg 1107
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>dbj|AB003428.1| Pseudomonas aeruginosa parC gene for topoisomerase IV subunit,
            complete cds
          Length = 2416

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 363  gaagaagctggtgcgcgagga 383
            |||||||||||||||||||||
Sbjct: 1543 gaagaagctggtgcgcgagga 1563
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>ref|XM_468710.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1548

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 212 ccgccctcgccggcggcgag 231
           ||||||||||||||||||||
Sbjct: 539 ccgccctcgccggcggcgag 558
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 372    ggtgcgcgaggacggcaccg 391
              ||||||||||||||||||||
Sbjct: 280852 ggtgcgcgaggacggcaccg 280833
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     cacgccggcgccggggccga 173
               ||||||||||||||||||||
Sbjct: 1439307 cacgccggcgccggggccga 1439326
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>ref|XM_743076.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g01730) partial
            mRNA
          Length = 6096

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 205  gccaggaccgccctcgccggcggc 228
            ||||||||||||||||| ||||||
Sbjct: 5856 gccaggaccgccctcgcaggcggc 5879
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     aggcggccaaggcggcggcc 303
               ||||||||||||||||||||
Sbjct: 1992290 aggcggccaaggcggcggcc 1992309
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>gb|AY929605.1| Uncultured sulfate-reducing bacterium clone GranDSR12 dissimilatory
           sulfite reductase subunit A (dsrA) and dissimilatory
           sulfite reductase subunit B (dsrB) genes, partial cds
          Length = 1905

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 cggcgcccagatgagctccc 127
           ||||||||||||||||||||
Sbjct: 807 cggcgcccagatgagctccc 826
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>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
             DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 283   gaggcggccaaggcggcggc 302
             ||||||||||||||||||||
Sbjct: 55789 gaggcggccaaggcggcggc 55808
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ccgccctcgccggcggcgag 231
             ||||||||||||||||||||
Sbjct: 45354 ccgccctcgccggcggcgag 45335
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 222     cggcggcgagggtgcgtggg 241
               ||||||||||||||||||||
Sbjct: 6044805 cggcggcgagggtgcgtggg 6044786
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>ref|NM_205134.1| Gallus gallus nuclear factor of kappa light polypeptide gene
           enhancer in B-cells 1 (p105) (NFKB1), mRNA
          Length = 4023

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 193 gcgtcccccgcggccaggaccgcc 216
           ||||||||||||||||| ||||||
Sbjct: 161 gcgtcccccgcggccagcaccgcc 138
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>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence
          Length = 197615

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    cgccggcgccggggccgacc 175
              ||||||||||||||||||||
Sbjct: 107200 cgccggcgccggggccgacc 107181
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 285     ggcggccaaggcggcggcca 304
               ||||||||||||||||||||
Sbjct: 1641113 ggcggccaaggcggcggcca 1641094
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 216     cctcgccggcggcgagggtgcgtg 239
               ||||| ||||||||||||||||||
Sbjct: 3231247 cctcgtcggcggcgagggtgcgtg 3231224
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    tccgccacgccggcgccggg 168
              ||||||||||||||||||||
Sbjct: 998568 tccgccacgccggcgccggg 998549
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 433     gcggacacgtcgatcgatct 452
               ||||||||||||||||||||
Sbjct: 3536467 gcggacacgtcgatcgatct 3536486
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 368      agctggtgcgcgaggacggc 387
                ||||||||||||||||||||
Sbjct: 16510698 agctggtgcgcgaggacggc 16510679
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>gb|AY088970.1| Arabidopsis thaliana clone 116257 mRNA, complete sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 409 ttcaggccatgggagacgta 428
           ||||||||||||||||||||
Sbjct: 479 ttcaggccatgggagacgta 498
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>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1123_B08
          Length = 134028

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 368   agctggtgcgcgaggacggc 387
             ||||||||||||||||||||
Sbjct: 42923 agctggtgcgcgaggacggc 42904
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>dbj|AK110839.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B04, full
           insert sequence
          Length = 1545

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 368 agctggtgcgcgaggacggc 387
           ||||||||||||||||||||
Sbjct: 722 agctggtgcgcgaggacggc 741
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>ref|XM_312237.2| Anopheles gambiae str. PEST ENSANGP00000010808 (ENSANGG00000008319),
            partial mRNA
          Length = 1713

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 279  ggacgaggcggccaaggcgg 298
            ||||||||||||||||||||
Sbjct: 1032 ggacgaggcggccaaggcgg 1051
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>ref|NM_210402.1| Eremothecium gossypii AER191Wp (AER191W), mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 tccgccacgccggcgccggg 168
           ||||||||||||||||||||
Sbjct: 854 tccgccacgccggcgccggg 835
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    cacgccggcgccggggccga 173
              ||||||||||||||||||||
Sbjct: 447433 cacgccggcgccggggccga 447452
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>dbj|AK065136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A04, full
           insert sequence
          Length = 3334

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 cctcgccggcggcgagggtg 235
           ||||||||||||||||||||
Sbjct: 222 cctcgccggcggcgagggtg 203
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>dbj|D13719.1|CHKNFKB1 Gallus gallus mRNA for NF-kB p50 subunit, complete cds
          Length = 4023

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 193 gcgtcccccgcggccaggaccgcc 216
           ||||||||||||||||| ||||||
Sbjct: 161 gcgtcccccgcggccagcaccgcc 138
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>dbj|AB008466.1| Streptomyces galilaeus aklavinone-aclacinomycin biosynthesis gene
             cluster, complete cds
          Length = 25883

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   gcggccaggaccgccctcgc 221
             ||||||||||||||||||||
Sbjct: 13180 gcggccaggaccgccctcgc 13199
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 150     ccgccacgccggcgccggggccga 173
               ||||||||| ||||||||||||||
Sbjct: 2022805 ccgccacgcgggcgccggggccga 2022782
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>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    cgacaagatcgcctactaca 502
              ||||||||||||||||||||
Sbjct: 115024 cgacaagatcgcctactaca 115005
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 285     ggcggccaaggcggcggccacgggcgac 312
               |||||||||||||||||||  |||||||
Sbjct: 2212315 ggcggccaaggcggcggccgtgggcgac 2212288



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 247     atgatgtccacgtccgcggcctcg 270
               |||||| |||||||||||||||||
Sbjct: 1766579 atgatgaccacgtccgcggcctcg 1766602
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>dbj|AB039379.1| Streptomyces aureofaciens tcsD, tcsE, tcsF, tcsG, genes for
            beta-ketoacyl synthase, beta-ketoacyl synthase2, acyl
            carrier protein, asparagine synthase homolog, complete
            cds
          Length = 5188

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  ccccgcggccaggaccgccc 217
            ||||||||||||||||||||
Sbjct: 5123 ccccgcggccaggaccgccc 5142
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>emb|AL590462.1|CNS07EGJ DNA centromeric region sequence BAC 34F04 of chromosome 5 of Podospora
             anserina
          Length = 103568

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   gaggcggccaaggcggcggc 302
             ||||||||||||||||||||
Sbjct: 49322 gaggcggccaaggcggcggc 49303


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,989,128
Number of Sequences: 3902068
Number of extensions: 2989128
Number of successful extensions: 83975
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 80842
Number of HSP's gapped (non-prelim): 3114
length of query: 546
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 523
effective length of database: 17,143,297,704
effective search space: 8965944699192
effective search space used: 8965944699192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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