Clone Name | bart22f11 |
---|---|
Clone Library Name | barley_pub |
>WRIP1_HUMAN (Q96S55) ATPase WRNIP1 (Werner helicase-interacting protein 1)| Length = 665 Score = 32.3 bits (72), Expect = 0.95 Identities = 29/114 (25%), Positives = 38/114 (33%) Frame = +2 Query: 149 DDQSDAAADVTLPALPTPAGENIVLSHGAPTPMLRLPSHRSTCXXXXXXXXXXXXGLARV 328 DD + + + A PTP+G ++ P RS+ A Sbjct: 100 DDGGETESRESYDAPPTPSGARLIPD---------FPVARSSSPGRKGSGKRPAAAAA-- 148 Query: 329 HPAVDVVPAELARGEEQEPREAVAEPDPDSRPDTDAEQKPLHGXXXXXXAAKAW 490 A P E QE EAV + D D D D E P H AA A+ Sbjct: 149 --AGSASPRSWDEAEAQEEEEAVGDGDGDGDADADGEDDPGHWDADAAEAATAF 200
>FHL1_SCHPO (O14270) Fork head transcription factor 1| Length = 743 Score = 30.8 bits (68), Expect = 2.8 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +2 Query: 356 ELARGEEQEPREAVAEPDPDSRPDT-DAEQKP 448 EL +G+ P + V PD + PDT DA QKP Sbjct: 261 ELKQGKSTSPSDTVLHPDLNGSPDTGDATQKP 292
>RCEL_RHOSH (P0C0Y8) Reaction center protein L chain (Photosynthetic reaction| center L subunit) Length = 281 Score = 29.6 bits (65), Expect = 6.1 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = -2 Query: 546 WWRWWKRMPW 517 WW+WW ++PW Sbjct: 262 WWQWWVKLPW 271
>RCEL_RHOS4 (Q3J1A5) Reaction center protein L chain (Photosynthetic reaction| center L subunit) Length = 281 Score = 29.6 bits (65), Expect = 6.1 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = -2 Query: 546 WWRWWKRMPW 517 WW+WW ++PW Sbjct: 262 WWQWWVKLPW 271
>SNX19_HUMAN (Q92543) Sorting nexin-19| Length = 992 Score = 29.3 bits (64), Expect = 8.0 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +2 Query: 326 VHPAVDVVPAELARGEEQEPREAVAEPDPDSRPDTDAEQ 442 V VD + R E Q P E ++E + +S+P T+ ++ Sbjct: 681 VSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKK 719
>MOT8_HUMAN (P36021) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) (MCT 7) Length = 613 Score = 29.3 bits (64), Expect = 8.0 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = +2 Query: 374 EQEPREAVAEPDPDSRPDTDAEQKPL 451 +QE +E V P+P+S P+ + E +P+ Sbjct: 93 DQEQQEPVGSPEPESEPEPEPEPEPV 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,328,881 Number of Sequences: 219361 Number of extensions: 656544 Number of successful extensions: 2997 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2796 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2984 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)