>NIPA2_PONPY (Q5R7Q3) Non-imprinted in Prader-Willi/Angelman syndrome region|
           protein 2 homolog
          Length = 360

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = +2

Query: 338 GLALAVASSAFIGASFILKKIGLMXXXXXXXXXXXXX-YTYLLEPLWWAGLITMLLGEVA 514
           GL LA++SS FIG SFILKK GL+              + YL E LWWAGL++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 515 NFVAYVFAPAVLVTPLGALSIIV 583
           NF AY FAPA LVTPLGALS++V
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLV 95

>NIPA2_HUMAN (Q8N8Q9) Non-imprinted in Prader-Willi/Angelman syndrome region|
           protein 2
          Length = 360

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = +2

Query: 338 GLALAVASSAFIGASFILKKIGLMXXXXXXXXXXXXX-YTYLLEPLWWAGLITMLLGEVA 514
           GL LA++SS FIG SFILKK GL+              + YL E LWWAGL++M  GEVA
Sbjct: 13  GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 515 NFVAYVFAPAVLVTPLGALSIIV 583
           NF AY FAPA LVTPLGALS++V
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLV 95

>NIPA2_MOUSE (Q9JJC8) Non-imprinted in Prader-Willi/Angelman syndrome region|
           protein 2 homolog
          Length = 359

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 49/83 (59%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
 Frame = +2

Query: 338 GLALAVASSAFIGASFILKKIGLMXXXXXXXXXXXXX-YTYLLEPLWWAGLITMLLGEVA 514
           GL LA+ SS FIG SFILKK GL+              + YL E LWWAGL++M  GEVA
Sbjct: 13  GLGLAMTSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72

Query: 515 NFVAYVFAPAVLVTPLGALSIIV 583
           NF AY FAPA LVTPLGALS++V
Sbjct: 73  NFAAYAFAPATLVTPLGALSVLV 95

>NIPA1_HUMAN (Q7RTP0) Non-imprinted in Prader-Willi/Angelman syndrome region|
           protein 1
          Length = 329

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = +2

Query: 338 GLALAVASSAFIGASFILKKIGLMXXXXXXXXXXXXXYTYLLEPLWWAGLITMLLGEVAN 517
           GL +AV SS   G++F+L+K G++              +YL + +WWAG I M +G++ N
Sbjct: 31  GLGVAVVSSLVNGSTFVLQKKGIVRAKRRGT-------SYLTDIVWWAGTIAMAVGQIGN 83

Query: 518 FVAYVFAPAVLVTPLGALSI 577
           F+AY   P VLVTPLGAL +
Sbjct: 84  FLAYTAVPTVLVTPLGALGV 103

>NIPA1_MOUSE (Q8BHK1) Non-imprinted in Prader-Willi/Angelman syndrome region|
           protein 1 homolog
          Length = 323

 Score = 69.3 bits (168), Expect = 8e-12
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = +2

Query: 338 GLALAVASSAFIGASFILKKIGLMXXXXXXXXXXXXXYTYLLEPLWWAGLITMLLGEVAN 517
           GL +AV SS   G++F+L+K G++              +YL + +WWAG I M +G++ N
Sbjct: 25  GLGVAVVSSLVNGSTFVLQKKGIVRAKRRGT-------SYLTDIVWWAGTIAMAVGQIGN 77

Query: 518 FVAYVFAPAVLVTPLGALSI 577
           F+AY   P VLVTPLGAL +
Sbjct: 78  FLAYTAVPTVLVTPLGALGV 97

>Y250_CORGL (P42459) Hypothetical protein Cgl0250/cg0304 (ORFX)|
          Length = 289

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 458 LLEPLWWAGLITMLLGEVANFVAYVFAPAVLVTPLGALSII 580
           L+ P+WWAG+ T +L      VA  F   ++V P+  LS++
Sbjct: 47  LMTPMWWAGMSTAMLAYFLQTVALGFGTLLVVQPVLVLSLM 87

>UBP49_MOUSE (Q6P9L4) Ubiquitin carboxyl-terminal hydrolase 49 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 49)
           (Ubiquitin-specific-processing protease 49)
           (Deubiquitinating enzyme 49)
          Length = 685

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 260 QLARQPPRRTAGLRFESPGKQEEPPVVARASPLLTPRALVSSVM 129
           +LA  PPR++A L   +PG     PV  R + L T R L ++ +
Sbjct: 199 ELASAPPRKSARLLLHAPG-----PVAVRPATLATSRRLSAAAL 237

>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)|
          Length = 685

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
 Frame = +2

Query: 11  RVASPVPLASSIPRSSTHDRAAGRRADHNNRRSHPS----YHPPSRTRQARAE*GG 166
           R+  P P     P  S H R  G R  H    S  S      PPSR  +AR   GG
Sbjct: 166 RLPPPPPPGEQPPSGSGHSRPPGARPPHRGGSSRGSGDAAAAPPSRGGKARPPGGG 221

>ATG2_NEUCR (Q871L5) Autophagy-related protein 2|
          Length = 2011

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -1

Query: 278 TASKKTQLARQPPRRTAGLRFESP 207
           + +K  Q+  +PP++T G+RFE+P
Sbjct: 804 SVAKAVQIPAKPPQKTRGVRFETP 827


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,075,212
Number of Sequences: 219361
Number of extensions: 679912
Number of successful extensions: 2506
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2502
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)