ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22c06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ224324.1|HVH224324 Hordeum vulgare cv. Haisa mRNA for cp31BHv protein Length = 1139 Score = 1090 bits (550), Expect = 0.0 Identities = 570/579 (98%) Strand = Plus / Plus Query: 13 atcccttcccctgctcgcctgnnnnnnnttatccccttcagtcaccatggccacctccgc 72 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 18 atcccttcccctgctcgcctgcccccccttatccccttcagtcaccatggccacctccgc 77 Query: 73 catgacactcgccatgtctgcggcaacggaggcctcgctcttccaccccgcgttcgccgc 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 catgacactcgccatgtctgcggcaacggaggcctcgctcttccaccccgcgttcgccgc 137 Query: 133 ccaacacaagctcgccccggcgtccgcctccctcccactcattttctctcgcgcgccgct 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 ccaacacaagctcgccccggcgtccgcctccctcccactcattttctctcgcgcgccgct 197 Query: 193 cctccgctccacccgcccccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 cctccgctccacccgcccccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 257 Query: 253 tgaggcgggcctcgactgggccgacgcggaggaagctgaagagacggtgacggaggagga 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 tgaggcgggcctcgactgggccgacgcggaggaagctgaagagacggtgacggaggagga 317 Query: 313 gcccgtggtggcggcctccggtggggacgcggggtacacagcggagccgcccgaggaggc 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 gcccgtggtggcggcctccggtggggacgcggggtacacagcggagccgcccgaggaggc 377 Query: 373 caaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgcccagctctt 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 caaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgcccagctctt 437 Query: 433 cgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggccagag 492 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 438 cgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacaaagagtcaggccagag 497 Query: 493 ccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcgagac 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 ccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcgagac 557 Query: 553 gtttaaccgctacgacatcagcggaaggcttctgaacgt 591 ||||||||||||| ||||||||||||||||||||||||| Sbjct: 558 gtttaaccgctacaacatcagcggaaggcttctgaacgt 596
>ref|XM_483743.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1233 Score = 307 bits (155), Expect = 2e-80 Identities = 218/239 (91%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 431 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 490 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 491 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 550 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 551 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 610 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgt 591 || ||||| ||||| |||| | |||||||||| || |||| |||||||||||||||||| Sbjct: 611 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgt 669 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 211 ccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||| ||||||| ||||||||||| |||||||||||||||| Sbjct: 223 ccgcctccccctcgcgcccctcgtcgcctcctccgacgccgc 264
>ref|XM_507331.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.19-2 mRNA Length = 1302 Score = 307 bits (155), Expect = 2e-80 Identities = 218/239 (91%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 425 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 484 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 485 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 544 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 545 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 604 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgt 591 || ||||| ||||| |||| | |||||||||| || |||| |||||||||||||||||| Sbjct: 605 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgt 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 211 ccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||| ||||||| ||||||||||| |||||||||||||||| Sbjct: 217 ccgcctccccctcgcgcccctcgtcgcctcctccgacgccgc 258
>dbj|AK105901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F09, full insert sequence Length = 1230 Score = 307 bits (155), Expect = 2e-80 Identities = 218/239 (91%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 428 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 487 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 488 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 547 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 548 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 607 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgt 591 || ||||| ||||| |||| | |||||||||| || |||| |||||||||||||||||| Sbjct: 608 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgt 666 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 211 ccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||| ||||||| ||||||||||| |||||||||||||||| Sbjct: 223 ccgcctccccctcgcgcccctcgtcgcctcctccgacgccgc 264
>dbj|AK070743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062K14, full insert sequence Length = 1302 Score = 307 bits (155), Expect = 2e-80 Identities = 218/239 (91%) Strand = Plus / Plus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 425 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 484 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttac 472 ||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 485 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttac 544 Query: 473 aacagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaa 532 ||||||||| |||| ||||||||||||||||| || |||||||||||||| ||||||||| Sbjct: 545 aacagagagacagggcagagccgtggatttgggttcgttaccatgagtacgattgaggaa 604 Query: 533 gctgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaacgt 591 || ||||| ||||| |||| | |||||||||| || |||| |||||||||||||||||| Sbjct: 605 gccgacaaggccattgagatgcttaaccgctatgatatcaacggaaggcttctgaacgt 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 211 ccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||| ||||||| ||||||||||| |||||||||||||||| Sbjct: 217 ccgcctccccctcgcgcccctcgtcgcctcctccgacgccgc 258
>ref|XM_483744.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 280 bits (141), Expect = 5e-72 Identities = 201/221 (90%) Strand = Plus / Plus Query: 371 gccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgcccagctc 430 ||||||||||||||||| ||||||||||| || |||||||||||| | |||||||||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 431 ttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggccag 490 ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 491 agccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcgag 550 |||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattgag 247 Query: 551 acgtttaaccgctacgacatcagcggaaggcttctgaacgt 591 | | |||||||||| || |||| |||||||||||||||||| Sbjct: 248 atgcttaaccgctatgatatcaacggaaggcttctgaacgt 288
>dbj|AK101214.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031B04, full insert sequence Length = 927 Score = 280 bits (141), Expect = 5e-72 Identities = 201/221 (90%) Strand = Plus / Plus Query: 371 gccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgagcggctcgcccagctc 430 ||||||||||||||||| ||||||||||| || |||||||||||| | |||||||||||| Sbjct: 68 gccaaggtgtacgtcggtaacctgccgtacgacgtcgacagcgagggcctcgcccagctc 127 Query: 431 ttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaacagagagtcaggccag 490 ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 128 ttcgagcaggccggcgtcgtcgaggtcgccgaggtcatttacaacagagagacagggcag 187 Query: 491 agccgtggatttggatttgttaccatgagtactattgaggaagctgacaaagccatcgag 550 |||||||||||||| || |||||||||||||| ||||||||||| ||||| ||||| ||| Sbjct: 188 agccgtggatttgggttcgttaccatgagtacgattgaggaagccgacaaggccattgag 247 Query: 551 acgtttaaccgctacgacatcagcggaaggcttctgaacgt 591 | | |||||||||| || |||| |||||||||||||||||| Sbjct: 248 atgcttaaccgctatgatatcaacggaaggcttctgaacgt 288
>gb|AY108263.1| Zea mays PCO100700 mRNA sequence Length = 891 Score = 234 bits (118), Expect = 3e-58 Identities = 205/234 (87%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| |||||||||||||| ||||| |||||||| || || || ||||||||||| Sbjct: 56 ggagccgccagaggaggccaaggtctacgttgggaaccttccctacgacgtcgacagcga 115 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 | | ||||| ||| |||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 116 gggactcgcgcagatcttcgaccaggccggcgtcgtcgaggtcgccgaggttatctacaa 175 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| | |||||||||||||| ||||| |||||||||||||| ||| |||||||||| Sbjct: 176 cagagaaactggccagagccgtgggtttggttttgttaccatgagcactgttgaggaagc 235 Query: 535 tgacaaagccatcgagacgtttaaccgctacgacatcagcggaaggcttctgaa 588 |||||||||||| |||| ||| | |||||| || || ||||| ||||||||||| Sbjct: 236 tgacaaagccattgagatgttcagccgctatgatattagcgggaggcttctgaa 289
>emb|AJ005286.1|HVH005286 Hordeum vulgare cv. Haisa mRNA for cp31AHv protein Length = 1318 Score = 204 bits (103), Expect = 2e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| ||||||||||||||||||||||| |||||||| || || ||||||||||| Sbjct: 490 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtcgacagcga 549 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 550 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttacaa 609 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 | |||| | | ||||||||||||||| || ||||| ||||||||||| |||||||| || Sbjct: 610 ccgagaaaccgaccagagccgtggattcgggtttgtcaccatgagtaccattgaggaggc 669 Query: 535 tga 537 ||| Sbjct: 670 tga 672
>dbj|D38485.1| Triticum aestivum mRNA for Ps16 protein, complete cds Length = 1161 Score = 204 bits (103), Expect = 2e-49 Identities = 163/183 (89%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| ||||||||||||||||||||||| |||||||| || || || |||||||| Sbjct: 365 ggagccgccggaggaggccaaggtgtacgtcggcaacctgccctacgacgtggacagcga 424 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||| ||||||||||| |||||||| |||||||||||| ||||||||||||| || Sbjct: 425 gcgcctcgcgcagctcttcgagcaggccggcgtcgtcgaggtctccgaggtcatttataa 484 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 ||| || ||| |||||||||||||||||| ||||| ||||||||||| |||||||| || Sbjct: 485 cagggaaacagaccagagccgtggatttgggtttgtcaccatgagtaccattgaggaggc 544 Query: 535 tga 537 ||| Sbjct: 545 tga 547
>gb|BT019263.1| Zea mays clone Contig936.F mRNA sequence Length = 1108 Score = 186 bits (94), Expect = 6e-44 Identities = 160/182 (87%) Strand = Plus / Minus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 737 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 678 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaac 475 || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 677 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaac 618 Query: 476 agagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagct 535 ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||||||| ||| Sbjct: 617 agagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggct 558 Query: 536 ga 537 || Sbjct: 557 ga 556
>gb|AY111861.1| Zea mays CL2457_1 mRNA sequence Length = 1273 Score = 186 bits (94), Expect = 6e-44 Identities = 160/182 (87%) Strand = Plus / Plus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 481 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 540 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaac 475 || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 541 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaac 600 Query: 476 agagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagct 535 ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||||||| ||| Sbjct: 601 agagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggct 660 Query: 536 ga 537 || Sbjct: 661 ga 662
>gb|M74566.1|MZENBPAA Zea mays nucleic acid-binding protein (NBP) Length = 1251 Score = 186 bits (94), Expect = 6e-44 Identities = 160/182 (87%) Strand = Plus / Plus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 481 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 540 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaac 475 || ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 541 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggtcatttacaac 600 Query: 476 agagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagct 535 ||||| ||| || || ||||| ||||| ||||| || ||||| ||| ||||||| ||| Sbjct: 601 agagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgttgaggaggct 660 Query: 536 ga 537 || Sbjct: 661 ga 662
>dbj|AK104354.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H01, full insert sequence Length = 1196 Score = 180 bits (91), Expect = 3e-42 Identities = 160/183 (87%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 437 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 496 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||| Sbjct: 497 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaa 556 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| ||| | ||| ||||||||||||||||| |||||||| || ||||||| || Sbjct: 557 cagagaaacagatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggc 616 Query: 535 tga 537 ||| Sbjct: 617 tga 619
>dbj|AK069121.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007A14, full insert sequence Length = 1289 Score = 180 bits (91), Expect = 3e-42 Identities = 160/183 (87%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 438 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 497 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtcatttacaa 474 ||| ||||||||||||||||| |||||||| ||||||||||| |||||||||| ||||| Sbjct: 498 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggtcatctacaa 557 Query: 475 cagagagtcaggccagagccgtggatttggatttgttaccatgagtactattgaggaagc 534 |||||| ||| | ||| ||||||||||||||||| |||||||| || ||||||| || Sbjct: 558 cagagaaacagatcggagtcgtggatttggatttgtcaccatgagcaccgttgaggaggc 617 Query: 535 tga 537 ||| Sbjct: 618 tga 620
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 161 bits (81), Expect = 3e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 27874512 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 27874453 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| | ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 27874452 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 27874400 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 |||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||| Sbjct: 27874265 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 27874206 Query: 522 ctattgaggaagctgacaaagccatcgagacgtttaaccgcta 564 | ||||||||||| ||||| ||||| |||| | |||||||||| Sbjct: 27874205 cgattgaggaagccgacaaggccattgagatgcttaaccgcta 27874163 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 211 ccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||| ||||||| ||||||||||| |||||||||||||||| Sbjct: 27874720 ccgcctccccctcgcgcccctcgtcgcctcctccgacgccgc 27874679 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctcgcgcgccgctcctccgct 200 ||||||||||||||||||||| Sbjct: 3794645 ctcgcgcgccgctcctccgct 3794625
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 161 bits (81), Expect = 3e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 353 gcggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagc 412 |||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 82590 gcggagccccccgaggaggccaaggtgtacgtcggtaacctgccgtacgacgtcgacagc 82531 Query: 413 gagcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| | ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 82530 gagggcctcgcccagctcttcgagcaggccggcgtcgtcgaggtcgccgaggt 82478 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 |||||||||||||||||||| |||| ||||||||||||||||| || ||||||||||||| Sbjct: 82343 aggtcatttacaacagagagacagggcagagccgtggatttgggttcgttaccatgagta 82284 Query: 522 ctattgaggaagctgacaaagccatcgagacgtttaaccgcta 564 | ||||||||||| ||||| ||||| |||| | |||||||||| Sbjct: 82283 cgattgaggaagccgacaaggccattgagatgcttaaccgcta 82241 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 211 ccgcgtcccccttacgcccctcgtcacctcctccgacgccgc 252 |||| ||||||| ||||||||||| |||||||||||||||| Sbjct: 82798 ccgcctccccctcgcgcccctcgtcgcctcctccgacgccgc 82757
>emb|Z11488.1|ZMNBPG Z.mays gene for nucleic acid binding protein Length = 3176 Score = 147 bits (74), Expect = 5e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 356 gagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcgag 415 ||||||||||||||||||||||| |||||||| |||||||| || || |||||||||||| Sbjct: 694 gagccgcccgaggaggccaaggtctacgtcggaaacctgccctacgacgtcgacagcgag 753 Query: 416 cggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 || ||||| |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 754 cgcctcgctcagctcttcgaccaggccggcgtcgtcgaggtcgcagaggt 803 Score = 40.1 bits (20), Expect = 8.0 Identities = 59/72 (81%) Strand = Plus / Plus Query: 466 catttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagtactat 525 ||||||||||||||| ||| || || ||||| ||||| ||||| || ||||| ||| | Sbjct: 1198 catttacaacagagaaacagatcaaagtcgtgggtttgggtttgtcactatgagcactgt 1257 Query: 526 tgaggaagctga 537 |||||| ||||| Sbjct: 1258 tgaggaggctga 1269
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 133 bits (67), Expect = 7e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 22205695 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 22205636 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| ||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 22205635 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 22205585 Score = 93.7 bits (47), Expect = 6e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 570766 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 570707 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| |||||||| |||||||| |||| || |||||||||||| ||||||| Sbjct: 570706 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggt 570656 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 22205108 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 22205049 Query: 522 ctattgaggaagctga 537 | ||||||| ||||| Sbjct: 22205048 ccgttgaggaggctga 22205033
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 133 bits (67), Expect = 7e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 25593 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 25534 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| ||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 25533 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 25483 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 25006 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 24947 Query: 522 ctattgaggaagctga 537 | ||||||| ||||| Sbjct: 24946 ccgttgaggaggctga 24931
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 133 bits (67), Expect = 7e-28 Identities = 100/111 (90%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 |||||||||||||||||||||||| |||||||||||||| || || || |||||||||| Sbjct: 127188 ggagccgcccgaggaggccaaggtctacgtcgggaacctaccctacgacatcgacagcga 127129 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| ||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct: 127128 gcgcctcgcccagctcttcgaacaggccggcatcgtcgaggtctccgaggt 127078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 462 aggtcatttacaacagagagtcaggccagagccgtggatttggatttgttaccatgagta 521 ||||||| ||||||||||| ||| | ||| ||||||||||||||||| |||||||| | Sbjct: 126601 aggtcatctacaacagagaaacagatcggagtcgtggatttggatttgtcaccatgagca 126542 Query: 522 ctattgaggaagctga 537 | ||||||| ||||| Sbjct: 126541 ccgttgaggaggctga 126526
>dbj|AK070749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064A16, full insert sequence Length = 742 Score = 97.6 bits (49), Expect = 4e-17 Identities = 97/113 (85%) Strand = Plus / Plus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 406 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 465 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggtca 467 ||| |||||||| |||||||| |||| || |||||||||||| ||||||||| Sbjct: 466 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggtca 518
>dbj|AP005821.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0094B20 Length = 146270 Score = 93.7 bits (47), Expect = 6e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 355 ggagccgcccgaggaggccaaggtgtacgtcgggaacctgccgtatgatgtcgacagcga 414 ||||||||| | |||||||||||| |||||||||||||| || || | |||||||||| Sbjct: 23776 ggagccgcctgcggaggccaaggtatacgtcgggaacctaccctacaacatcgacagcga 23717 Query: 415 gcggctcgcccagctcttcgaccaggccggtgtcgtcgaggtcgccgaggt 465 ||| |||||||| |||||||| |||| || |||||||||||| ||||||| Sbjct: 23716 gcgcctcgcccaactcttcgaacaggaaggcgtcgtcgaggtctccgaggt 23666
>emb|Y14557.1|PSY14557 Pisum sativum mRNA for ribonucleoprotein Length = 1187 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 487 ccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 537 |||||| || || ||||||||||| ||||||||||| |||| |||||||| Sbjct: 445 ccagagtcgcggctttggatttgtaaccatgagtaccgttgaagaagctga 495
>gb|AF255058.1|AF255058 Pisum sativum 33 kDa ribonucleoprotein gene, complete cds Length = 2056 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 487 ccagagccgtggatttggatttgttaccatgagtactattgaggaagctga 537 |||||| || || ||||||||||| ||||||||||| |||| |||||||| Sbjct: 544 ccagagtcgcggctttggatttgtaaccatgagtaccgttgaagaagctga 594
>gb|AY752097.1| Uncultured lake bacterium P38.30 16S ribosomal RNA gene, partial sequence Length = 1364 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 549 agacgtttaaccgctacgacatc 571 ||||||||||||||||||||||| Sbjct: 893 agacgtttaaccgctacgacatc 871
>ref|NM_115437.1| Arabidopsis thaliana unknown protein AT3G55790 mRNA, complete cds Length = 312 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 174 cggtggcggaggaggaggccgtggtggcgg 203
>gb|DQ316359.1| Uncultured actinobacterium clone ST11-14 16S ribosomal RNA gene, partial sequence Length = 1492 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 549 agacgtttaaccgctacgacat 570 |||||||||||||||||||||| Sbjct: 1014 agacgtttaaccgctacgacat 993
>emb|X53933.1|NSRNP28 Tobacco mRNA for 28 kDa chloroplast ribonucleoprotein Length = 1079 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 494 cgtggatttggatttgttaccatgagtactattgaggaagctgacaaagc 543 ||||||||||| ||||| || ||||| ||| | || |||||||||||||| Sbjct: 436 cgtggatttgggtttgtgacgatgagcactgtggaagaagctgacaaagc 485
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 96541 cggtggcggaggaggaggccgtggtggcgg 96570
>gb|AC072026.13| Homo sapiens 3 BAC RP11-500K19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 131266 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 160 ctccctcccactcattttctct 181 |||||||||||||||||||||| Sbjct: 45161 ctccctcccactcattttctct 45140
>emb|AJ010443.1|HSA010443 Homo sapiens mRNA for immunoglobulin IgG3 heavy chain, anti-RhD, therad 7 Length = 529 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgacg 304 |||||||||||||||||||||| Sbjct: 511 ggaagctgaagagacggtgacg 490
>gb|L31376.1|SALGRP1C Sinapis alba RNA-binding protein homologue (grp1c) mRNA, unspliced intron Length = 930 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 559 cggtggcggaggaggaggccgtggtggcgg 588
>gb|L31375.1|SALGRP1B Sinapis alba RNA-binding protein homologue (grp1b) mRNA, unspliced intron Length = 811 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 413 cggtggcggaggaggaggccgtggtggcgg 442
>gb|L31374.1|SALGRP1A Sinapis alba RNA-binding protein homologue (grp1a) mRNA, complete cds Length = 683 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 297 cggtgacggaggaggagcccgtggtggcgg 326 ||||| ||||||||||| |||||||||||| Sbjct: 285 cggtggcggaggaggaggccgtggtggcgg 314
>gb|L15080.1|CIPRNABP Mesembryanthemum crystallinum RNA-binding protein mRNA, complete cds Length = 1264 Score = 44.1 bits (22), Expect = 0.51 Identities = 34/38 (89%) Strand = Plus / Plus Query: 500 tttggatttgttaccatgagtactattgaggaagctga 537 ||||| ||||| |||||||| ||| ||||||||||||| Sbjct: 473 tttgggtttgtgaccatgagcactgttgaggaagctga 510
>ref|XM_480239.1| Oryza sativa (japonica cultivar-group), mRNA Length = 357 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctcgcgcgccgctcctccgct 200 ||||||||||||||||||||| Sbjct: 339 ctcgcgcgccgctcctccgct 319
>ref|NM_187458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 184 ggatttggatttgttaccatg 204
>ref|XM_467898.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 235 ggaggaggagcccgtggtggc 255
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 257 gcgggcctcgactgggccgacgcgg 281 ||||||||||||||| ||||||||| Sbjct: 817328 gcgggcctcgactggcccgacgcgg 817352
>gb|AY393102.1| Homo sapiens clone RA702-G6-29.fa immunoglobulin heavy chain mRNA, partial cds Length = 530 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 434 ggaagctgaagagacggtgac 414
>gb|AY393025.1| Homo sapiens clone RA702-G2-11.fa immunoglobulin heavy chain mRNA, partial cds Length = 308 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 142 ggaagctgaagagacggtgac 122
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 8741356 ggatttggatttgttaccatg 8741336 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 6435056 ggaggaggagcccgcggtggcggc 6435033
>ref|NM_001032746.1| Takifugu rubripes A-kinase-anchor-protein 84 (AKAP84), mRNA Length = 2217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 acgcccctcgtcacctcctcc 244 ||||||||||||||||||||| Sbjct: 2072 acgcccctcgtcacctcctcc 2052
>gb|AY393471.1| Homo sapiens isolate RA129-G5-8.fa immunoglobulin heavy chain variable region mRNA, partial cds Length = 444 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 348 ggaagctgaagagacggtgac 328
>emb|AL121908.16|HSDJ719C8 Human DNA sequence from clone RP4-719C8 on chromosome 20 Contains three different 5' ends of the C20orf101 gene and three CpG islands, complete sequence Length = 150985 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 107639 ggaggaggagcccgtggtggc 107659
>gb|U38483.1|DCU38483 Dianthus caryophyllus (CEBP-1) mRNA, complete cds Length = 1217 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatgagtactattgaggaagctga 537 |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 551 ggatttgggtttgtaaccatgagcacagttgaggaagctga 591
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 85007 ggatttggatttgttaccatg 84987
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 tcgctcttccaccccgcgttc 127 ||||||||||||||||||||| Sbjct: 15707986 tcgctcttccaccccgcgttc 15707966 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 16962433 ggaggaggagcccgcggtggcggc 16962456 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 10142807 ggaggaggagcccgcggtggcggc 10142784 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ctcctccgctccacccgcccccgc 214 |||||||||||| ||||||||||| Sbjct: 7545764 ctcctccgctccgcccgcccccgc 7545787
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 8739191 ggatttggatttgttaccatg 8739171 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 6434269 ggaggaggagcccgcggtggcggc 6434246
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 31982226 ggaggaggagcccgtggtggc 31982206 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 10878852 ggaggaggagcccgcggtggcggc 10878875 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 cgtggatttggatttgttac 513 |||||||||||||||||||| Sbjct: 6785374 cgtggatttggatttgttac 6785355
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 ctcgcgcgccgctcctccgct 200 ||||||||||||||||||||| Sbjct: 59862 ctcgcgcgccgctcctccgct 59842
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 143227 ggaggaggagcccgtggtggc 143207
>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1175_B01 Length = 96191 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggc 324 ||||||||||||||||||||| Sbjct: 2601 ggaggaggagcccgtggtggc 2581
>emb|AJ305231.1|HSA305231 Homo sapiens mRNA for immunoglobulin heavy chain variable region V(D)J-rearrangement (IGHV gene), patient 10 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 320 ggaagctgaagagacggtgac 300
>dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026M08, full insert sequence Length = 1438 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 497 ggatttggatttgttaccatg 517 ||||||||||||||||||||| Sbjct: 345 ggatttggatttgttaccatg 365
>gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (NF1), A-kinase anchor protein (AKAP84), BAW protein (BAW), and WSB1 protein (WSB1) genes, complete cds Length = 49254 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 acgcccctcgtcacctcctcc 244 ||||||||||||||||||||| Sbjct: 34459 acgcccctcgtcacctcctcc 34439
>gb|AF153880.1|AF153880 Fugu rubripes A-kinase-anchor-protein 84 (AKAP84) mRNA, complete cds Length = 2217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 acgcccctcgtcacctcctcc 244 ||||||||||||||||||||| Sbjct: 2072 acgcccctcgtcacctcctcc 2052
>gb|AF103133.1|AF103133 Homo sapiens clone N136 immunoglobulin heavy chain variable region mRNA, partial cds Length = 402 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 372 ggaagctgaagagacggtgac 352
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 107 tcgctcttccaccccgcgttc 127 ||||||||||||||||||||| Sbjct: 15661219 tcgctcttccaccccgcgttc 15661199 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 16915666 ggaggaggagcccgcggtggcggc 16915689 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 10142692 ggaggaggagcccgcggtggcggc 10142669 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ctcctccgctccacccgcccccgc 214 |||||||||||| ||||||||||| Sbjct: 7545643 ctcctccgctccgcccgcccccgc 7545666
>emb|AL954854.3|CNS08CD8 Oryza sativa chromosome 12, . BAC OSJNBa0080D17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159718 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 tcgctcttccaccccgcgttc 127 ||||||||||||||||||||| Sbjct: 117669 tcgctcttccaccccgcgttc 117689
>emb|AJ002775.1|HSAJ2775 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain Patient 2, 4 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002774.1|HSAJ2774 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain Patient 2, 3 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002773.1|HSAJ2773 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 2,2 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002772.1|HSAJ2772 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 2,1 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002770.1|HSAJ2770 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 1,3 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002769.1|HSAJ2769 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 1,2 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ002768.1|HSAJ2768 Homo sapiens mRNA for variable region 5 of immunoglobulin G4 heavy chain patient 1,1 Length = 407 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 384 ggaagctgaagagacggtgac 364
>emb|AJ222559.1|HSAJ22559 Homo sapiens mRNA for IgG, clone GD2 Length = 390 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ggaagctgaagagacggtgac 303 ||||||||||||||||||||| Sbjct: 363 ggaagctgaagagacggtgac 343
>ref|NM_100698.3| Arabidopsis thaliana prephenate dehydratase AT1G08250 mRNA, complete cds Length = 1445 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 623 agacggtgacggaggaggag 604
>ref|XM_464698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 cgtggatttggatttgttac 513 |||||||||||||||||||| Sbjct: 319 cgtggatttggatttgttac 338
>ref|XM_464699.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1927 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 cgtggatttggatttgttac 513 |||||||||||||||||||| Sbjct: 537 cgtggatttggatttgttac 556
>ref|NM_196707.1| Oryza sativa (japonica cultivar-group) putative serine/threonine kinase (OSJNBa0046P18.16), mRNA Length = 1338 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tgtcgtcgaggtcgccgagg 464 |||||||||||||||||||| Sbjct: 587 tgtcgtcgaggtcgccgagg 606
>ref|NM_183717.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 894 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 789 ggaggaggagcccgcggtggcggc 766
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggtggcggcctccggtgggg 338 |||||||||||||||||||| Sbjct: 14901 ggtggcggcctccggtgggg 14920
>gb|AC009394.5| Drosophila melanogaster clone BACR03J17, complete sequence Length = 199043 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 72095 cggaggcgcccgaggaggccaagg 72072
>gb|BC027985.1| Homo sapiens microtubule associated serine/threonine kinase 1, mRNA (cDNA clone MGC:40229 IMAGE:4938605), complete cds Length = 3651 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gacggaggaggagcccgtgg 320 |||||||||||||||||||| Sbjct: 925 gacggaggaggagcccgtgg 944
>ref|NM_014975.1| Homo sapiens microtubule associated serine/threonine kinase 1 (MAST1), mRNA Length = 4833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gacggaggaggagcccgtgg 320 |||||||||||||||||||| Sbjct: 2118 gacggaggaggagcccgtgg 2137
>gb|BT025205.1| Drosophila melanogaster FI01109 full insert cDNA Length = 2146 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 1931 cggaggcgcccgaggaggccaagg 1954
>gb|AY297246.1| Sitticus sp. MCH-2003 28S ribosomal RNA gene, partial sequence Length = 755 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 cgactgggccgacgcggagg 284 |||||||||||||||||||| Sbjct: 564 cgactgggccgacgcggagg 545
>gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complete sequence Length = 211680 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 ggaggcctcgctcttccacc 119 |||||||||||||||||||| Sbjct: 68064 ggaggcctcgctcttccacc 68045
>gb|BT022168.1| Drosophila melanogaster IP01323 full insert cDNA Length = 609 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 317 cggaggcgcccgaggaggccaagg 340
>emb|Z82214.23|HS526I14 Human DNA sequence from clone RP3-526I14 on chromosome 22, complete sequence Length = 129389 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tcaccatggccacctccgcc 73 |||||||||||||||||||| Sbjct: 23497 tcaccatggccacctccgcc 23516
>gb|AY091181.1| Arabidopsis thaliana unknown protein (At1g08250) mRNA, complete cds Length = 1273 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 557 agacggtgacggaggaggag 538
>gb|AY056290.1| Arabidopsis thaliana unknown protein (At1g08250) mRNA, complete cds Length = 1345 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 571 agacggtgacggaggaggag 552
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09, complete sequence Length = 146568 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 115182 ggaggaggagcccgcggtggcggc 115159
>gb|AC020934.9| Homo sapiens chromosome 19 clone CTD-2265O21, complete sequence Length = 119347 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gacggaggaggagcccgtgg 320 |||||||||||||||||||| Sbjct: 101626 gacggaggaggagcccgtgg 101645
>ref|NM_001014637.1| Drosophila melanogaster Rpb4 CG33520-PC, isoform C (Rpb4) mRNA, complete cds Length = 2317 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 2007 cggaggcgcccgaggaggccaagg 2030
>ref|NM_001014635.1| Drosophila melanogaster Rpb4 CG33520-PA, isoform A (Rpb4) mRNA, complete cds Length = 2377 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 2067 cggaggcgcccgaggaggccaagg 2090
>ref|NM_001014634.1| Drosophila melanogaster Rpb4 CG33520-PE, isoform E (Rpb4) mRNA, complete cds Length = 2362 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 2052 cggaggcgcccgaggaggccaagg 2075
>ref|NM_001014636.1| Drosophila melanogaster Rpb4 CG33520-PB, isoform B (Rpb4) mRNA, complete cds Length = 2422 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 2112 cggaggcgcccgaggaggccaagg 2135
>ref|NM_001014633.1| Drosophila melanogaster Rpb4 CG33520-PD, isoform D (Rpb4) mRNA, complete cds Length = 732 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 422 cggaggcgcccgaggaggccaagg 445
>gb|AD000092.1|CH19HHR23 Homo sapiens DNA from chromosome 19p13.2 cosmids R31240, R30272 and R28549 containing the EKLF, GCDH, CRTC, and RAD23A genes, genomic sequence Length = 110096 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gacggaggaggagcccgtgg 320 |||||||||||||||||||| Sbjct: 13238 gacggaggaggagcccgtgg 13257
>gb|BT023309.1| Drosophila melanogaster IP02340 full insert cDNA Length = 577 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 359 cggaggcgcccgaggaggccaagg 382
>gb|BT023308.1| Drosophila melanogaster IP02337 full insert cDNA Length = 581 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 375 cggaggcgcccgaggaggccaagg 398
>gb|BT022166.1| Drosophila melanogaster IP01330 full insert cDNA Length = 2147 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 1931 cggaggcgcccgaggaggccaagg 1954
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 20223704 ggaggaggagcccgcggtggcggc 20223727
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgtcgtcgaggtcgccgagg 464 |||||||||||||||||||| Sbjct: 15408411 tgtcgtcgaggtcgccgagg 15408392
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggtggcggcctccggtgggg 338 |||||||||||||||||||| Sbjct: 14286115 ggtggcggcctccggtgggg 14286134
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 11782451 ggaggaggagcccgcggtggcggc 11782474
>emb|BX816940.1|CNS0AD2X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH77ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1384 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 585 agacggtgacggaggaggag 566
>emb|BX816693.1|CNS0ADC3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1380 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 585 agacggtgacggaggaggag 566
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgtcgtcgaggtcgccgagg 464 |||||||||||||||||||| Sbjct: 125774 tgtcgtcgaggtcgccgagg 125755
>emb|BX813337.1|CNS0AARI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 623 agacggtgacggaggaggag 604
>gb|AC011438.3|AC011438 Genomic sequence for Arabidopsis thaliana BAC T23G18 from chromosome I, complete sequence Length = 91470 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 agacggtgacggaggaggag 313 |||||||||||||||||||| Sbjct: 47597 agacggtgacggaggaggag 47616
>gb|AF544020.1| Drosophila melanogaster RNA polymerase II accessory factor rpb4 mRNA, complete cds, alternatively spliced Length = 715 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 390 cggaggcgcccgaggaggccaagg 413
>gb|AF544019.1| Drosophila melanogaster RNA polymerase II accessory factor rpb4 mRNA, complete cds, alternatively spliced Length = 602 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 390 cggaggcgcccgaggaggccaagg 413
>gb|AF544018.1| Drosophila melanogaster ADA2A-2 mRNA, complete cds, alternatively spliced Length = 2335 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 2007 cggaggcgcccgaggaggccaagg 2030
>gb|AF544017.1| Drosophila melanogaster ADA2A-1 mRNA, complete cds, alternatively spliced Length = 2380 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 2052 cggaggcgcccgaggaggccaagg 2075
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 tcgtcgaggtcgccgaggtc 466 |||||||||||||||||||| Sbjct: 5429398 tcgtcgaggtcgccgaggtc 5429379
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 121619 ggaggaggagcccgcggtggcggc 121642
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 85051 ggaggaggagcccgcggtggcggc 85074
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 cgtggatttggatttgttac 513 |||||||||||||||||||| Sbjct: 3100 cgtggatttggatttgttac 3081
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 cgtggatttggatttgttac 513 |||||||||||||||||||| Sbjct: 106427 cgtggatttggatttgttac 106408
>dbj|AK121550.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033A09, full insert sequence Length = 3695 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgtcgtcgaggtcgccgagg 464 |||||||||||||||||||| Sbjct: 2567 tgtcgtcgaggtcgccgagg 2548
>dbj|AK107553.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-A12, full insert sequence Length = 2054 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ggtggcggcctccggtgggg 338 |||||||||||||||||||| Sbjct: 229 ggtggcggcctccggtgggg 210
>dbj|AK100904.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132A08, full insert sequence Length = 1926 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 cgtggatttggatttgttac 513 |||||||||||||||||||| Sbjct: 536 cgtggatttggatttgttac 555
>dbj|AK068145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134J07, full insert sequence Length = 1886 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ctcctccgctccacccgcccccgc 214 |||||||||||| ||||||||||| Sbjct: 168 ctcctccgctccgcccgcccccgc 191
>dbj|AK066106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052M01, full insert sequence Length = 4119 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgtcgtcgaggtcgccgagg 464 |||||||||||||||||||| Sbjct: 3080 tgtcgtcgaggtcgccgagg 3061
>gb|AE003721.3| Drosophila melanogaster chromosome 3R, section 59 of 118 of the complete sequence Length = 224889 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 cggagccgcccgaggaggccaagg 377 ||||| |||||||||||||||||| Sbjct: 92589 cggaggcgcccgaggaggccaagg 92566
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgtcgtcgaggtcgccgagg 464 |||||||||||||||||||| Sbjct: 15416652 tgtcgtcgaggtcgccgagg 15416633
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 19814 ggaggaggagcccgcggtggcggc 19837
>emb|AL732643.6|CNS08C9I Oryza sativa chromosome 12, . BAC OSJNBa0094N04 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 92382 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 7012 ggaggaggagcccgcggtggcggc 6989
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 ggaggaggagcccgtggtggcggc 327 |||||||||||||| ||||||||| Sbjct: 84476 ggaggaggagcccgcggtggcggc 84499
>emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003_E07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113215 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 ctcctccgctccacccgcccccgc 214 |||||||||||| ||||||||||| Sbjct: 33831 ctcctccgctccgcccgcccccgc 33854
>emb|X79182.1|HSWAD25 H.sapiens heavy chain variable region Length = 396 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 ggaggaagctgaagagacggtgac 303 |||||| ||||||||||||||||| Sbjct: 378 ggaggaggctgaagagacggtgac 355
>dbj|AB023190.1| Homo sapiens mRNA for KIAA0973 protein, partial cds Length = 4833 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 gacggaggaggagcccgtgg 320 |||||||||||||||||||| Sbjct: 2118 gacggaggaggagcccgtgg 2137 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,219,587 Number of Sequences: 3902068 Number of extensions: 4219587 Number of successful extensions: 87064 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85755 Number of HSP's gapped (non-prelim): 1305 length of query: 591 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 568 effective length of database: 17,143,297,704 effective search space: 9737393095872 effective search space used: 9737393095872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
