Clone Name
bart22c04
Clone Library Name
barley_pub
>SY111_ARATH (Q42374) Syntaxin-related protein KNOLLE (Syntaxin-111) (AtSYP111)|
Length = 310
Score = 155 bits (391), Expect = 1e-37
Identities = 83/163 (50%), Positives = 115/163 (70%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMA 307
MNDLMTKSFMSYVDLKKAAMKD+EAG D S DE L F +EAE V+ EM
Sbjct: 1 MNDLMTKSFMSYVDLKKAAMKDMEAGPDFDLEMASTKADKMDENLSSFLEEAEYVKAEMG 60
Query: 308 AIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQ 487
I + LAR+ +EE K +H+ ++++++R +++ +IVS L +A+ I+ LE+MD+AN
Sbjct: 61 LISETLARIEQYHEESKGVHKAESVKSLRNKISNEIVSGLRKAKSIKSKLEEMDKANKEI 120
Query: 488 RRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRMM 616
+RLS GT + R+RT+VT GLRKKLK++M++FQ LRQ+MM
Sbjct: 121 KRLS-----GTPVYRSRTAVTNGLRKKLKEVMMEFQGLRQKMM 158
>SY112_ARATH (Q9ZPV9) Putative syntaxin-112 (AtSYP112)|
Length = 285
Score = 119 bits (298), Expect = 7e-27
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 2/164 (1%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETE--LSQVGGATDERLQGFFKEAEAVREE 301
MNDLMTKSF+SYV+LKK A D+E+ ++ E A +E L GFF+E E ++
Sbjct: 1 MNDLMTKSFLSYVELKKQARTDMESDRDLEKGEDFNFDFSPADEENLSGFFQEIETIKTL 60
Query: 302 MAAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANA 481
+ I L L NEE KS H LR +R R+ ++IV++ +A ++ +E +++ N
Sbjct: 61 IEEITHLLLDLQNLNEETKSTHSTKILRGLRDRMESNIVTISRKANTVKTLIETLEKRNV 120
Query: 482 AQRRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRM 613
A R +EG+ +DRTRTS+T G+RKKL+D M +F LR+R+
Sbjct: 121 ANR---TSFKEGSCVDRTRTSITNGVRKKLRDTMSEFHRLRERI 161
>SY123_ARATH (Q9ZQZ8) Syntaxin-123 (AtSYP123)|
Length = 305
Score = 115 bits (288), Expect = 1e-25
Identities = 68/163 (41%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLK-KAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEM 304
MNDL++ SF Y DL + + D+E+ +S G DE FF E+V+E+M
Sbjct: 1 MNDLISSSFKRYTDLNHQVQLDDIES------QNVSLDSGNLDE----FFGYVESVKEDM 50
Query: 305 AAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAA 484
A+ + RL ANEE K++H A++ +R R+++ + VL R + I+ L ++++NAA
Sbjct: 51 KAVDEIHKRLQDANEESKTVHDSKAVKKLRARMDSSVTEVLKRVKMIKTKLVALEKSNAA 110
Query: 485 QRRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRM 613
QR++ AGC G++ DRTRTSV +GL KKLKD+M DFQ LR +M
Sbjct: 111 QRKV-AGCGPGSSADRTRTSVVSGLGKKLKDMMDDFQRLRTKM 152
>SY124_ARATH (O64791) Putative syntaxin-124 (AtSYP124)|
Length = 303
Score = 111 bits (278), Expect = 1e-24
Identities = 66/163 (40%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAA-MKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEM 304
MNDL + SF Y DLK+ A M D+E+G ET L FF++ E V++ M
Sbjct: 1 MNDLFSSSFKKYTDLKQQAQMDDIESG---KETM----------NLDKFFEDVENVKDNM 47
Query: 305 AAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAA 484
+ L +NEE K++H ++ +R +++ D+ VL R + I++ LE +++ANA
Sbjct: 48 KGVETLYKSLQDSNEECKTVHNAKKVKELRAKMDGDVAQVLKRVKMIKQKLEALEKANAN 107
Query: 485 QRRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRM 613
R +S GC G++ DRTRTSV +GL KKLKD+M FQ LR RM
Sbjct: 108 SRNVS-GCGPGSSTDRTRTSVVSGLGKKLKDLMDSFQGLRARM 149
>SY121_ARATH (Q9ZSD4) Syntaxin-121 (AtSYP121) (Syntaxin-related protein At-Syr1)|
Length = 346
Score = 101 bits (252), Expect = 2e-21
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDE-RLQGFFKEAEAVREEM 304
MNDL + SF + + + +D+ GG D +++ G+T L FF++ E+V+EE+
Sbjct: 1 MNDLFSSSFSRFRSGEPSPRRDVAGGG--DGVQMANPAGSTGGVNLDKFFEDVESVKEEL 58
Query: 305 AAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAA 484
+ L + +E+ K+LH A++ +R +++ D+ L +A+ I+ LE +DRANAA
Sbjct: 59 KELDRLNETLSSCHEQSKTLHNAKAVKDLRSKMDGDVGVALKKAKMIKVKLEALDRANAA 118
Query: 485 QRRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQ 607
R L GC G++ DRTRTSV GLRKKL D M F LR+
Sbjct: 119 NRSL-PGCGPGSSSDRTRTSVLNGLRKKLMDSMDSFNRLRE 158
>SY125_ARATH (Q9SXB0) Putative syntaxin-125 (AtSYP125)|
Length = 298
Score = 99.0 bits (245), Expect = 1e-20
Identities = 60/162 (37%), Positives = 93/162 (57%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMA 307
MNDL + SF +A + D+EAG ET L FF++ E V+++M
Sbjct: 1 MNDLFSNSFKK----NQAQLGDVEAG---QETM----------NLDKFFEDVENVKDDMK 43
Query: 308 AIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQ 487
+ +L +NEE K++H ++ +R +++ D+ VL R + I++ LE +++ANA
Sbjct: 44 GVEALYKKLQDSNEECKTVHNAKKVKELRAKMDGDVAMVLKRVKIIKQKLEALEKANANS 103
Query: 488 RRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRM 613
R + GC G++ DRTR+SV +GL KKLKD+M FQ LR RM
Sbjct: 104 RNV-PGCGPGSSTDRTRSSVVSGLGKKLKDLMDSFQGLRARM 144
>SY132_ARATH (Q8VZU2) Syntaxin-132 (AtSYP132)|
Length = 304
Score = 90.5 bits (223), Expect = 4e-18
Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELS---QVGGATDERLQGFFKEAEAVRE 298
MNDL+ SF +L G ++ E ++ Q GG D+ L+ FFK+ + + +
Sbjct: 1 MNDLLKGSF------------ELPRGQSSREGDVELGEQQGG--DQGLEDFFKKVQVIDK 46
Query: 299 EMAAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRAN 478
+ + L +L A++EE KS+ + A++A++ + D+ V AR I+ LE++DR N
Sbjct: 47 QYDKLDKLLKKLQASHEESKSVTKAPAMKAIKKTMEKDVDEVGSIARFIKGKLEELDREN 106
Query: 479 AAQRRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRM 613
A R+ GC +G+ +DR+RT+ T L+KKLKD M +FQ LR+ +
Sbjct: 107 LANRQ-KPGCAKGSGVDRSRTATTLSLKKKLKDKMAEFQVLRENI 150
>SY122_ARATH (Q9SVC2) Syntaxin-122 (AtSYP122) (Synt4)|
Length = 341
Score = 85.1 bits (209), Expect = 1e-16
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGAT---DERLQGFFKEAEAVRE 298
MNDL++ SF + V A N E ++V G + L FF + E V E
Sbjct: 1 MNDLLSGSFKTSV-----ADGSSPPHSHNIEMSKAKVSGGSCHGGNNLDTFFLDVEVVNE 55
Query: 299 EMAAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRAN 478
++ + L ++NE+ K+LH +A++ ++ +++AD+ + L AR ++ LE +DRAN
Sbjct: 56 DLKELDRLCHNLRSSNEQSKTLHNANAVKELKKKMDADVTAALKTARRLKGNLEALDRAN 115
Query: 479 AAQRRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQ 607
R L G++ DR RTSV GLRKKLKD M F +R+
Sbjct: 116 EVNRSLPES-GPGSSSDRQRTSVVNGLRKKLKDEMEKFSRVRE 157
>SY131_ARATH (Q9SRV7) Putative syntaxin-131 (AtSYP131)|
Length = 306
Score = 84.7 bits (208), Expect = 2e-16
Identities = 52/162 (32%), Positives = 90/162 (55%)
Frame = +2
Query: 128 MNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMA 307
MNDL+ S D ++ D+E+G G + D L GFFK+ + + ++
Sbjct: 1 MNDLLKGSLEFSRD--RSNRSDIESGHGP--------GNSGDLGLSGFFKKVQEIEKQYE 50
Query: 308 AIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQ 487
+ L +L A+EE K++ + A+++++ R+ D+ V +R I+ +E++DR N +
Sbjct: 51 KLDKHLNKLQGAHEETKAVTKAPAMKSIKQRMERDVDEVGRISRFIKGKIEELDREN-LE 109
Query: 488 RRLSAGCREGTTLDRTRTSVTAGLRKKLKDIMLDFQALRQRM 613
R GC +GT +DRTRT+ T ++KK KD + +FQ LRQ +
Sbjct: 110 NRTKPGCGKGTGVDRTRTATTIAVKKKFKDKISEFQTLRQNI 151
>STX2_MOUSE (Q00262) Syntaxin-2 (Epimorphin)|
Length = 289
Score = 35.8 bits (81), Expect = 0.10
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 8/144 (5%)
Frame = +2
Query: 185 MKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAI--------RDALARLHA 340
+ DL A ND+ + + V D + GFF + E +R +A I ++ L A
Sbjct: 5 LPDLTACRTNDDGDTAVVIVEKDHFMDGFFHQVEEIRSSIARIAQHVEDVKKNHSIILSA 64
Query: 341 ANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQRRLSAGCREGT 520
N EGK + + L + +I R RG +++E + R S R
Sbjct: 65 PNPEGKIKEELEDL-------DKEIKKTANRIRGKLKSIEQSCDQDENGNRTSVDLR--- 114
Query: 521 TLDRTRTSVTAGLRKKLKDIMLDF 592
+ RT+ SV L +K D+M ++
Sbjct: 115 -IRRTQHSV---LSRKFVDVMTEY 134
>MRCKA_HUMAN (Q5VT25) Serine/threonine-protein kinase MRCK alpha (EC 2.7.11.1)|
(CDC42-binding protein kinase alpha) (Myotonic dystrophy
kinase-related CDC42-binding kinase alpha) (Myotonic
dystrophy protein kinase-like alpha) (MRCK alpha)
(DMPK-like alpha
Length = 1732
Score = 34.7 bits (78), Expect = 0.23
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 5/157 (3%)
Frame = +2
Query: 158 SYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLH 337
S VD A KDLE +E E + L+ +EA AVR+E + DA ++
Sbjct: 475 STVDGPLTASKDLEIKNLKEEIEKLRKQVTESSHLEQQLEEANAVRQE---LDDAFRQIK 531
Query: 338 AANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALED--MDRANAAQRRLSAGCR 511
A ++ K+L Q R +N ++V R + + L+D R A Q + R
Sbjct: 532 AYEKQIKTLQQE------REDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINER 585
Query: 512 EGTTLDRTRTSVTAGLRKKLKD---IMLDFQALRQRM 613
T L + + +R K ++ +M ++LRQ +
Sbjct: 586 L-TELHTQKQKLARHVRDKEEEVDLVMQKVESLRQEL 621
>DNL4_ARATH (Q9LL84) DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV)|
(Polydeoxyribonucleotide synthase [ATP] 4)
Length = 1219
Score = 34.3 bits (77), Expect = 0.30
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 11/100 (11%)
Frame = +2
Query: 260 LQGFFKEAEAVREEMAAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADI-VSVLGRA 436
++ FFKE R+E ++D ++ + GK + L+ +R AD+ V ++G
Sbjct: 405 VERFFKETVENRDEGIVLKDLESKWEPGDRSGKWM----KLKPEYIRAGADLDVLIIGGY 460
Query: 437 RGIQR----------ALEDMDRANAAQRRLSAGCREGTTL 526
G R AL D AN RR + CR GT L
Sbjct: 461 YGSGRRGGEVAQFLVALADRAEANVYPRRFMSFCRVGTGL 500
>MBEB_ECOLI (P13659) Mobilization protein mbeB|
Length = 172
Score = 33.9 bits (76), Expect = 0.39
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +2
Query: 185 MKDLEAGGANDETELSQVGGATDERLQGFFKE-----AEAVREEMAAIRDALARLHAANE 349
M +L GA E +L + +T++ L F+ +EAV IRDA+A A+ E
Sbjct: 1 MSNLLQTGAEFEKKLKERAESTEKMLNNEFRRLGESVSEAVTSNETKIRDAIALFTASTE 60
Query: 350 EGKSLHQPDALRAMRVRVNADIVSVLG 430
E H+ AM ++ D++ + G
Sbjct: 61 ESLEKHREGVKEAM-MQHRRDVLKLAG 86
>FLAD2_RHIME (Q52942) Flagellin D|
Length = 395
Score = 33.1 bits (74), Expect = 0.67
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Frame = +2
Query: 191 DLEAGGANDETELSQVGGATDERLQGFFKEAEAVR----EEMAAIRDALARLHAAN---- 346
DL AGGA + + GG +++G + EA A +E+AA+ A A + A +
Sbjct: 216 DLIAGGAVFQGNYALAGGVNYVKVEGVWVEAVASSGAPGQEVAAVTTAAAPITADSWAVD 275
Query: 347 ---EEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQRRLS 499
S+ P ++ + + A ++ RG+ ALED+ A +A +S
Sbjct: 276 TTAGPAASVPAPASIENIDITNAAQAANLDALIRGVDEALEDLISATSALGSIS 329
>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
Length = 1875
Score = 32.7 bits (73), Expect = 0.87
Identities = 34/150 (22%), Positives = 68/150 (45%)
Frame = +2
Query: 158 SYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLH 337
S ++ K +++ E GA E + +++ ERL+ +++ E++ ++RD
Sbjct: 1306 SEIENLKEELENKERQGAEAEEKFNRLRRQAQERLKTSKLSQDSLTEQVNSLRD------ 1359
Query: 338 AANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQRRLSAGCREG 517
A N SL + +A + NA + + I++ ED ++A+ R L A E
Sbjct: 1360 AKNVLENSLSEANA--RIEELQNAKVAQGNNQLEAIRKLQEDAEKAS---RELQAKLEES 1414
Query: 518 TTLDRTRTSVTAGLRKKLKDIMLDFQALRQ 607
TT + S GL +++ + + + RQ
Sbjct: 1415 TT---SYESTINGLNEEITTLKEEIEKQRQ 1441
>MYSA_DROME (P05661) Myosin heavy chain, muscle|
Length = 1962
Score = 32.7 bits (73), Expect = 0.87
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
Frame = +2
Query: 167 DLKKAAMKDLEAGGANDET-------ELSQVGGATDERLQGFFKEAEAVREEMAAIRDAL 325
D +AA+++ EA +E ELSQV D R+Q +E E R+ D++
Sbjct: 1537 DELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSM 1596
Query: 326 ARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQRR 493
A +GK+ +ALR M+ ++ ADI ++ AL+ ++ANA ++
Sbjct: 1597 QASLEAEAKGKA----EALR-MKKKLEADI-------NELEIALDHANKANAEAQK 1640
>FDHE_RHIME (Q931D7) Protein fdhE homolog|
Length = 306
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = +2
Query: 236 VGGATD--ERLQGFFKEAEAVREEMAAIRDALARLHAANEE 352
+GG+ D E LQ FF++AEA+ E+ AA +ALA++ A+EE
Sbjct: 95 MGGSPDCREVLQQFFEKAEAL-EKPAAAAEALAQVRTADEE 134
>RL1_CHRVO (Q7NQE3) 50S ribosomal protein L1|
Length = 231
Score = 31.2 bits (69), Expect = 2.5
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +2
Query: 182 AMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEGKS 361
A+K+ +AG T+ + + AT R EAEA+RE +A+ DAL + A +G
Sbjct: 152 AVKNAKAGQVQYRTDKAGIIHATIGRASF---EAEALRENFSALVDALVKAKPAASKGVY 208
Query: 362 LHQPDALRAMRVRVNADIVSV 424
L + M + D +V
Sbjct: 209 LKKIAVSSTMGIGARVDTATV 229
>PROA_STRAW (Q82C81) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)|
(Glutamate-5-semialdehyde dehydrogenase)
(Glutamyl-gamma-semialdehyde dehydrogenase) (GSA
dehydrogenase)
Length = 428
Score = 31.2 bits (69), Expect = 2.5
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
Frame = +2
Query: 149 SFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALA 328
+ ++ D + ++ A A D E ++ G ++ + E VR A +RD +A
Sbjct: 38 ALLAIADALEVRTSEIVAANAKD-VERAREAGTSEAIIDRLTLTPERVRAIAADVRDVVA 96
Query: 329 RLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRAR---GIQRALEDMDRANAAQRRLS 499
E + P+ + +VRV +V ++ AR + A + NA R S
Sbjct: 97 LPDPVGEVVRGSTLPNGIDLRQVRVPLGVVGIIYEARPNVTVDAAALCLKSGNAVLLRGS 156
Query: 500 AGCREGTT 523
A E T
Sbjct: 157 ASAYESNT 164
>SYGB_PSEPK (Q88RR9) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)|
(Glycine--tRNA ligase beta chain) (GlyRS)
Length = 684
Score = 30.8 bits (68), Expect = 3.3
Identities = 25/119 (21%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +2
Query: 119 IAAMNDLMTKSFMSYVDLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVRE 298
+ A L ++ V+ + + + G ++ E A + L ++A+ +
Sbjct: 562 VQAFRKLPEAEALAAVNKRVSNLLSKAEGAIAEQVEPKYFDNANEFSLYSAIQQADQAVQ 621
Query: 299 EMAAIR---DALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDM 466
MAA R ++LARL A + + + + A +V A+ ++L R RG+ + D+
Sbjct: 622 PMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADI 680
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
Length = 3336
Score = 30.4 bits (67), Expect = 4.3
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +2
Query: 185 MKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEGKSL 364
+ D +AG E SQ GG + LQG E EA E ++AL+RL A E S
Sbjct: 1763 VSDSQAGSLQSELLCSQAGGPRGQALQG---ELEAALE----AKEALSRLLADQERRHS- 1814
Query: 365 HQPDALRAMRVRV 403
AL A++ R+
Sbjct: 1815 ---QALEALQQRL 1824
>DNAK_EHRRW (Q5HAY1) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
70 kDa protein) (HSP70)
Length = 645
Score = 30.0 bits (66), Expect = 5.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 197 EAGGANDETELSQVGGATDERLQGFFKEAEAVREE 301
+A G + GG TD+ +Q KEAE+ EE
Sbjct: 489 KASGKEQAIRIQSSGGLTDDEIQNMIKEAESKAEE 523
>DNAK_EHRRG (Q5FFM4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
70 kDa protein) (HSP70)
Length = 645
Score = 30.0 bits (66), Expect = 5.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 197 EAGGANDETELSQVGGATDERLQGFFKEAEAVREE 301
+A G + GG TD+ +Q KEAE+ EE
Sbjct: 489 KASGKEQAIRIQSSGGLTDDEIQNMIKEAESKAEE 523
>PIBF1_HUMAN (Q8WXW3) Progesterone-induced-blocking factor 1|
Length = 757
Score = 30.0 bits (66), Expect = 5.7
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +2
Query: 254 ERLQGFFKEAEAVREEMAAIRDALARLHAANEEGKSLHQPDALRAMRVRVNADIVSVLGR 433
ERLQ +E++ REEM + +R H E LH D L +R++ N +I +
Sbjct: 342 ERLQAQLEESKKAREEMYE-KYVASRDHYKTEYENKLH--DELEQIRLKTNQEI----DQ 394
Query: 434 ARGIQRALEDMDRANAAQRRLSA 502
R R + + + N + R +A
Sbjct: 395 LRNASREMYERENRNLREARDNA 417
>IF2P_NATPD (Q3IMS5) Probable translation initiation factor IF-2|
Length = 602
Score = 30.0 bits (66), Expect = 5.7
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = +2
Query: 356 KSLHQPDALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQRRLSAGCREGTTLDRT 535
++L QP L +R + V +G A GI+ A D+D A AG DR
Sbjct: 288 RALLQPQPLAEIRTEKQFEQVEAVGAAAGIKIAAPDLDDA-------MAGAPVRVVRDRP 340
Query: 536 RTSVTAGLRKKLKDIML 586
V A + +L DI +
Sbjct: 341 VEEVIAEVEAELADIQV 357
>EP15R_HUMAN (Q9UBC2) Epidermal growth factor receptor substrate 15-like 1|
(Eps15-related protein) (Eps15R)
Length = 864
Score = 29.3 bits (64), Expect = 9.7
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 215 DETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEG-KSLHQPD 376
+ET+L Q A +L+ K ++ ++E+ R L++LH + +E +SL Q D
Sbjct: 511 EETQLEQSIQAGRVQLETIIKSLKSTQDEINQARSKLSQLHESRQEAHRSLEQYD 565
>ATG17_YARLI (Q6C0L6) Autophagy-related protein 17|
Length = 408
Score = 29.3 bits (64), Expect = 9.7
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +2
Query: 167 DLKKAAMKDLEAGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAAN 346
D+ + K+ E A ++TEL + +D + AEA E+MA + +LAR +
Sbjct: 153 DIVNRSKKEFEREKA-EQTELL-IHQTSDSGIYDLLNSAEACSEDMANLLQSLARHYDLC 210
Query: 347 EEGKSLHQPDALRAMRVRVNADIVSVLGRARGI-----QRALEDMDRANAAQRRLSAGCR 511
E G+ L + A+ V+ LG R + Q+ + +D + GC+
Sbjct: 211 ERGQDLSTG--------AIEAEDVNELGELRAVLENDAQQLPDVLDELQERLDEVKQGCQ 262
>DNAK_THERO (P96133) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
70 kDa protein) (HSP70)
Length = 631
Score = 29.3 bits (64), Expect = 9.7
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = +2
Query: 200 AGGANDETELSQVGGATDERLQGFFKEAEAVREEMAAIRDALARLHAANEEGKSLHQPD- 376
A G + ++ G T+E +Q +EAE EE A R+A + N+ L+Q +
Sbjct: 486 ATGREQKITITASTGLTEEEIQRMIREAEEHAEEDRAKREA---IDVRNQAEALLYQAEK 542
Query: 377 ALRAMRVRVNADIVSVLGRARGIQRALEDMDRANAAQRR 493
L R+ +++ L R + + D N A+ R
Sbjct: 543 TLNEFSDRIPSELKLELENKMQAVREIVERDPMNTARLR 581
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.309 0.131 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,663,824
Number of Sequences: 219361
Number of extensions: 607744
Number of successful extensions: 2369
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2355
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)