ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22c03 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene) Length = 915 Score = 878 bits (443), Expect = 0.0 Identities = 524/551 (95%) Strand = Plus / Plus Query: 47 atggcgccgctcccaccctggaggccagcgtgcctcctacccctcctctccgtcgtcgct 106 |||||||||||| || || |||||||||| |||||||| ||||||||||||||| ||| Sbjct: 1 atggcgccgctcgcagcccggaggccagcctgcctcctggccctcctctccgtcgccgcg 60 Query: 107 gccttattcctaaccccgccggccttggcggcggggggaaagaccggccaggtgacggtg 166 ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gccttattcctgaccccgacggccttggcggcggggggaaagaccggccaggtgacggtg 120 Query: 167 ttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtac 226 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 121 ttctggggacggaacaaggccgagggctccctgcgtgaggcctgcgactccggtatgtac 180 Query: 227 accatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctcgac 286 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 181 accatggtcaccatgtccttgctcgacgtcttcggcgccaacggcaagtaccacctcgac 240 Query: 287 ctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggc 346 ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 241 ctctccggccatgacctctcctccgtcggcgccgacatcaagcactgccagtccaagggc 300 Query: 347 gtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccaaccga 406 ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 301 gtccctgtctccctctccatcggcggctacggcaccggctactcgctgccgtccaaccgc 360 Query: 407 tcggcgctcgacctcttcgaccacctctggaactcctacttcggcgggtccaagccgggc 466 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 361 tccgcgctcgacctcttcgaccacctctggaactcctacttcggcgggtccaagccgagc 420 Query: 467 gtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctcttcctggagcacggc 526 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcccccgccccttcggcgacgcgtggctcgacggcgtcgacctcttcctggagcacggc 480 Query: 527 acaccggcggaccgctacgacgtgctggcgctggagctggccaagcacaacatccgcggg 586 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acgccggcggaccgctacgacgtgctggcgctggagctggccaagcacaacatccgcggg 540 Query: 587 gggccggggaa 597 || |||||||| Sbjct: 541 ggcccggggaa 551
>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III, complete cds Length = 934 Score = 731 bits (369), Expect = 0.0 Identities = 517/565 (91%), Gaps = 6/565 (1%) Strand = Plus / Plus Query: 36 agaaaccaaaaatggcgccgctcccaccctggaggccagcg---tgcctcctacccctcc 92 ||||||||| ||||||||||||| ||||| |||||||||| |||||||| |||| | Sbjct: 4 agaaaccaacaatggcgccgctcgcacccgggaggccagcagcctgcctcctggcccttc 63 Query: 93 tctccgtcgtcgctgccttattcctaaccccgccggccttggcggcggggggaaagaccg 152 ||||||||||| | || ||| ||| | |||||| ||||||||||||| ||||||| Sbjct: 64 tctccgtcgtcacggcgctatccctggcggcgccgggcttggcggcgggg---aagaccg 120 Query: 153 gccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcg 212 |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 121 gccaggtgacggtgttctggggccggaacaaggccgaggggtccctgcgcgaggcctgcg 180 Query: 213 actccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggca 272 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | Sbjct: 181 actccggcatgtacaccatggtcaccatgtctttcctcgacgtctttggcgccaaaggaa 240 Query: 273 agtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcact 332 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 241 agtaccacctcgacctctccggccacgacctctccgccgtcggcgccgacatcaagcact 300 Query: 333 gccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgc 392 |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 301 gccagtccaagggcgtccccgtctccctctccgttggcggctacggcaccggctactcgc 360 Query: 393 tcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctacttcggcg 452 |||| |||||||| || |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 361 tcccgtccaaccgctccgcgctcgacctcttcgaccacctctggaactcctacttgggcg 420 Query: 453 ggtccaagccgggcgtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctct 512 ||||||| || ||||| |||||||| || ||||||||||||||||||||| ||||||||| Sbjct: 421 ggtccaaccctggcgtgccccgcccctttggcgacgcgtggctcgacggcatcgacctct 480 Query: 513 tcctggagcacggcacaccggcggaccgctacgacgtgctggcgctggagctggccaagc 572 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 481 tcctggagcacggcacgccggcggaccgctacgacgtgctggcgctggagctggcgaagc 540 Query: 573 acaacatccgcggggggccggggaa 597 ||||||||||||| || |||||||| Sbjct: 541 acaacatccgcggcggcccggggaa 565
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 408 bits (206), Expect = e-111 Identities = 382/440 (86%), Gaps = 3/440 (0%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 14490753 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 14490694 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgcc 265 |||||||||||||| | ||||||||||||| ||||||||||||| |||| | || Sbjct: 14490693 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgtgtacggac-- 14490636 Query: 266 aacggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatc 325 ||||||||||| ||||||||||||| || ||| | | || | |||||| ||||||| Sbjct: 14490635 -acggcaagtacaacctcgacctctcgggacaccccatagccggcatcggcgacgacatc 14490577 Query: 326 aagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggc 385 |||||||||||||||| |||||||| || || |||||||||||||||| ||||| |||| Sbjct: 14490576 aagcactgccagttcatcggcgtcccggtgtcgctctccatcggcggcttcggcaacggc 14490517 Query: 386 tactcgctcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctac 445 |||||||| || |||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 14490516 tactcgctgccgtccaaccgatcggcgctcgagctcttcgactacctctggaacgcctac 14490457 Query: 446 ttcggcgggtccaagccgggcgtcccccgccctttcggcgacgcgtggctcgacggcgtc 505 ||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 14490456 ttcggtgggtccaaggcgggcgtgtaccgccccttcggcgacgcgtggctcgacggcgtc 14490397 Query: 506 gacctcttcctggagcacggcacaccggcggaccgctacgacgtgctggcgctggagctg 565 ||||| ||||||||||||||||| || |||||| | ||||||||||||||||||||||| Sbjct: 14490396 gacctgttcctggagcacggcacgcccgcggacaggtacgacgtgctggcgctggagctc 14490337 Query: 566 gccaagcacaacatccgcgg 585 |||||||||||||||||||| Sbjct: 14490336 gccaagcacaacatccgcgg 14490317 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| || || |||||||||||||||||||||||||||||| | Sbjct: 11388319 ctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtcc 11388378 Query: 341 aagggcgtccccgtctccctctccatcggcggc 373 | |||| || |||| ||| |||||||||||| Sbjct: 11388379 aggggcatcaccgtgctcctgtccatcggcggc 11388411 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cccctcctctccgtcgtcgctgcc 109 ||||||||||||||||||| |||| Sbjct: 15503978 cccctcctctccgtcgtcgttgcc 15503955
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 408 bits (206), Expect = e-111 Identities = 382/440 (86%), Gaps = 3/440 (0%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||||||||||| || |||||||| ||||| |||| |||||| |||| || ||| Sbjct: 83927 aagaccggccaggtgaccgtcttctggggccggaacaaggacgagggcaccctccgcgag 83868 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgcc 265 |||||||||||||| | ||||||||||||| ||||||||||||| |||| | || Sbjct: 83867 gcctgcgactccgggctctacaccatggtcatcatgtccttcctcaacgtgtacggac-- 83810 Query: 266 aacggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatc 325 ||||||||||| ||||||||||||| || ||| | | || | |||||| ||||||| Sbjct: 83809 -acggcaagtacaacctcgacctctcgggacaccccatagccggcatcggcgacgacatc 83751 Query: 326 aagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggc 385 |||||||||||||||| |||||||| || || |||||||||||||||| ||||| |||| Sbjct: 83750 aagcactgccagttcatcggcgtcccggtgtcgctctccatcggcggcttcggcaacggc 83691 Query: 386 tactcgctcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctac 445 |||||||| || |||||||||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 83690 tactcgctgccgtccaaccgatcggcgctcgagctcttcgactacctctggaacgcctac 83631 Query: 446 ttcggcgggtccaagccgggcgtcccccgccctttcggcgacgcgtggctcgacggcgtc 505 ||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 83630 ttcggtgggtccaaggcgggcgtgtaccgccccttcggcgacgcgtggctcgacggcgtc 83571 Query: 506 gacctcttcctggagcacggcacaccggcggaccgctacgacgtgctggcgctggagctg 565 ||||| ||||||||||||||||| || |||||| | ||||||||||||||||||||||| Sbjct: 83570 gacctgttcctggagcacggcacgcccgcggacaggtacgacgtgctggcgctggagctc 83511 Query: 566 gccaagcacaacatccgcgg 585 |||||||||||||||||||| Sbjct: 83510 gccaagcacaacatccgcgg 83491
>ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 174 bits (88), Expect = 2e-40 Identities = 250/302 (82%), Gaps = 9/302 (2%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 115 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 174 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 175 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 234 Query: 272 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 235 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 294 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggctactcg 391 |||||| ||||||||||| |||||||||| |||||||||| ||| || ||||||| Sbjct: 295 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg---cgg---cgcctactcg 348 Query: 392 ctcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctacttcggc 451 ||||| |||||| ||||||||||| |||||||| |||||||||||| ||||| ||||| Sbjct: 349 ctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggc 408 Query: 452 gg 453 || Sbjct: 409 gg 410 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 479 ttcggcgacgcgtggctcgacggcgtcgacctcttcctggagcacggcacaccggcggac 538 ||||||||||| |||||||||||||||| ||||||| || | || ||| |||||||| Sbjct: 448 ttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggag 507 Query: 539 cgctacgacgtgct 552 |||||||||||||| Sbjct: 508 cgctacgacgtgct 521
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 174 bits (88), Expect = 2e-40 Identities = 250/302 (82%), Gaps = 9/302 (2%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 26161676 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 26161735 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 26161736 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 26161795 Query: 272 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 26161796 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 26161855 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggctactcg 391 |||||| ||||||||||| |||||||||| |||||||||| ||| || ||||||| Sbjct: 26161856 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg---cgg---cgcctactcg 26161909 Query: 392 ctcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctacttcggc 451 ||||| |||||| ||||||||||| |||||||| |||||||||||| ||||| ||||| Sbjct: 26161910 ctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggc 26161969 Query: 452 gg 453 || Sbjct: 26161970 gg 26161971 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 454178 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 454119 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 454118 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 454063 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 479 ttcggcgacgcgtggctcgacggcgtcgacctcttcctggagcacggcacaccggcggac 538 ||||||||||| |||||||||||||||| ||||||| || | || ||| |||||||| Sbjct: 26162009 ttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggag 26162068 Query: 539 cgctacgacgtgct 552 |||||||||||||| Sbjct: 26162069 cgctacgacgtgct 26162082 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 ||||||||||||||||||||||| |||| Sbjct: 7138586 cgtcggcgccgacatcaagcactaccag 7138559 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 324 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggc 373 ||||| |||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 13416986 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcggc 13417035 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgtgcctcctacccctcctctccg 98 |||||||||||| ||||||||||| Sbjct: 16993856 cgtgcctcctactcctcctctccg 16993833
>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full insert sequence Length = 1165 Score = 174 bits (88), Expect = 2e-40 Identities = 250/302 (82%), Gaps = 9/302 (2%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 163 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 222 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 223 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 282 Query: 272 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 283 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 342 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggctactcg 391 |||||| ||||||||||| |||||||||| |||||||||| ||| || ||||||| Sbjct: 343 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg---cgg---cgcctactcg 396 Query: 392 ctcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctacttcggc 451 ||||| |||||| ||||||||||| |||||||| |||||||||||| ||||| ||||| Sbjct: 397 ctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggc 456 Query: 452 gg 453 || Sbjct: 457 gg 458 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 479 ttcggcgacgcgtggctcgacggcgtcgacctcttcctggagcacggcacaccggcggac 538 ||||||||||| |||||||||||||||| ||||||| || | || ||| |||||||| Sbjct: 496 ttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggag 555 Query: 539 cgctacgacgtgct 552 |||||||||||||| Sbjct: 556 cgctacgacgtgct 569
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 174 bits (88), Expect = 2e-40 Identities = 250/302 (82%), Gaps = 9/302 (2%) Strand = Plus / Plus Query: 155 caggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgac 214 |||||||||||||||||||| ||||| |||| ||||||||| || || ||||| |||||| Sbjct: 53534 caggtgacggtgttctggggccggaacaaggacgaggggtctctccgggaggcgtgcgac 53593 Query: 215 tccggcatgtacaccatggtcaccatgtccttcctcgacgtctttggcgc---caacggc 271 ||||| |||||||||||||| ||||||||||||| |||||| ||||| | |||| Sbjct: 53594 accggcttgtacaccatggtcgtcatgtccttcctcaacgtctacggcgcccgcggcggc 53653 Query: 272 aagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcac 331 |||||| |||||||||| |||| ||| || || | |||||| |||| |||||||| Sbjct: 53654 gagtaccgcctcgacctcgccggacacccggtgggctgcatcggcggcgacgtcaagcac 53713 Query: 332 tgccagttcaagggcgtccccgtctccctctccatcggcggctacggcaccggctactcg 391 |||||| ||||||||||| |||||||||| |||||||||| ||| || ||||||| Sbjct: 53714 tgccagcgcaagggcgtcctcgtctccctcgccatcggcgg---cgg---cgcctactcg 53767 Query: 392 ctcccatccaaccgatcggcgctcgacctcttcgaccacctctggaactcctacttcggc 451 ||||| |||||| ||||||||||| |||||||| |||||||||||| ||||| ||||| Sbjct: 53768 ctcccgaccaaccagtcggcgctcgatctcttcgaacacctctggaacacctacctcggc 53827 Query: 452 gg 453 || Sbjct: 53828 gg 53829 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 479 ttcggcgacgcgtggctcgacggcgtcgacctcttcctggagcacggcacaccggcggac 538 ||||||||||| |||||||||||||||| ||||||| || | || ||| |||||||| Sbjct: 53867 ttcggcgacgccgtgctcgacggcgtcgacttcttcctcgaccgcgccacgccggcggag 53926 Query: 539 cgctacgacgtgct 552 |||||||||||||| Sbjct: 53927 cgctacgacgtgct 53940
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 155 bits (78), Expect = 2e-34 Identities = 286/352 (81%), Gaps = 5/352 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 60784 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 60843 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 60844 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 60900 Query: 284 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 60901 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 60960 Query: 344 ggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccaac 403 | ||||||| |||||||||||||||| | ||| || |||||| ||||| ||||| Sbjct: 60961 tacatccccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaac 61020 Query: 404 cgatcggcgctcgacctcttcgaccacctctggaactcctacttcggcgg-gtccaagcc 462 || || |||| || ||||||||||||| |||||| | ||||||| | || |||| Sbjct: 61021 gcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgagcc 61080 Query: 463 gggcgtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctcttc 514 ||||| |||||||| |||||||||||| | | |||||||||||||||||| Sbjct: 61081 -ggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttc 61131 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 75794 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 75853 Query: 369 gcggctacggcaccggctactcgctccc 396 ||||| | ||| ||| ||||||||||| Sbjct: 75854 gcggccagggcggcgggtactcgctccc 75881 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 67353 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 67412 Query: 369 gcggc 373 ||||| Sbjct: 67413 gcggc 67417 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 81639 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 81698 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 81699 gaacatcttcgtcttcctctccatcggcggc 81729 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 87194 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 87135 Query: 343 gggcgtccccgtctccctctccatcggcggctacggc 379 | | |||||||| ||||||| |||||||| ||||| Sbjct: 87134 gaacatccccgtcctcctctccgtcggcggcgacggc 87098 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 55955 ctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtcc 55896 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 ||||||||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 55895 aagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 55840 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 51253 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 51194 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 51193 aagggcgtctacatgctcctctccatcggcggcgacggc 51155 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 63722 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 63781 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 63782 caagggcatcgtcgtgctcctctccatcggcggc 63815 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 57862 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 57921 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 || |||| || |||| |||||| ||||||||| Sbjct: 57922 caggggcatcaccgtgctcctctcaatcggcggc 57955 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 84428 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 84369 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 84368 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 84324 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 84267 cgtcggcgccgacatcaagcactgccag 84240 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 472 ccgccctttcggcgacgcgtggctcgacggcgtcgacctct 512 |||||| ||||||||||| |||||||||||||||||||| Sbjct: 87005 ccgccccttcggcgacgccgtgctcgacggcgtcgacctct 86965 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 88736 cgtcggcgccgacgtcaagcactgcca 88710 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 471 cccgccctttcggcgacgcgtggctcgacggcgtcgac 508 ||||||| ||||||||||| |||||||||||||||| Sbjct: 88572 cccgcccgttcggcgacgccgtgctcgacggcgtcgac 88535 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 81502 ggaaagaccgggcagatgaccgtgttctgggg 81533
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 155 bits (78), Expect = 2e-34 Identities = 286/352 (81%), Gaps = 5/352 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28101517 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28101576 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 28101577 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 28101633 Query: 284 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 28101634 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 28101693 Query: 344 ggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccaac 403 | ||||||| |||||||||||||||| | ||| || |||||| ||||| ||||| Sbjct: 28101694 tacatccccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaac 28101753 Query: 404 cgatcggcgctcgacctcttcgaccacctctggaactcctacttcggcgg-gtccaagcc 462 || || |||| || ||||||||||||| |||||| | ||||||| | || |||| Sbjct: 28101754 gcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgagcc 28101813 Query: 463 gggcgtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctcttc 514 ||||| |||||||| |||||||||||| | | |||||||||||||||||| Sbjct: 28101814 -ggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttc 28101864 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28117239 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28117298 Query: 369 gcggctacggcaccggctactcgctccc 396 ||||| | ||| ||| ||||||||||| Sbjct: 28117299 gcggccagggcggcgggtactcgctccc 28117326 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28108798 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28108857 Query: 369 gcggc 373 ||||| Sbjct: 28108858 gcggc 28108862 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 28123084 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 28123143 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 28123144 gaacatcttcgtcttcctctccatcggcggc 28123174 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 28128639 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 28128580 Query: 343 gggcgtccccgtctccctctccatcggcggctacggc 379 | | |||||||| ||||||| |||||||| ||||| Sbjct: 28128579 gaacatccccgtcctcctctccgtcggcggcgacggc 28128543 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 28096688 ctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtcc 28096629 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 ||||||||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 28096628 aagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 28096573 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 28091986 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 28091927 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 28091926 aagggcgtctacatgctcctctccatcggcggcgacggc 28091888 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 28105167 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28105226 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 28105227 caagggcatcgtcgtgctcctctccatcggcggc 28105260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 28098595 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 28098654 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 || |||| || |||| |||||| ||||||||| Sbjct: 28098655 caggggcatcaccgtgctcctctcaatcggcggc 28098688 Score = 61.9 bits (31), Expect = 2e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||||||||||| |||||||| | ||||||| ||||||||||||||||||| Sbjct: 28104455 cctcgacctctccggncacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28104514 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 28104515 caagggcatcgtcgtgctcctctccatcggcggc 28104548 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28125873 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28125814 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28125813 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28125769 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 28125712 cgtcggcgccgacatcaagcactgccag 28125685 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 472 ccgccctttcggcgacgcgtggctcgacggcgtcgacctct 512 |||||| ||||||||||| |||||||||||||||||||| Sbjct: 28128450 ccgccccttcggcgacgccgtgctcgacggcgtcgacctct 28128410 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 28130181 cgtcggcgccgacgtcaagcactgcca 28130155 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 471 cccgccctttcggcgacgcgtggctcgacggcgtcgac 508 ||||||| ||||||||||| |||||||||||||||| Sbjct: 28130017 cccgcccgttcggcgacgccgtgctcgacggcgtcgac 28129980 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 28122947 ggaaagaccgggcagatgaccgtgttctgggg 28122978
>dbj|AK073800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067D20, full insert sequence Length = 1106 Score = 155 bits (78), Expect = 2e-34 Identities = 286/352 (81%), Gaps = 5/352 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 193 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 252 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 253 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 309 Query: 284 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 310 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 369 Query: 344 ggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccaac 403 | ||||||| |||||||||||||||| | ||| || |||||| ||||| ||||| Sbjct: 370 tacatccccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaac 429 Query: 404 cgatcggcgctcgacctcttcgaccacctctggaactcctacttcggcgg-gtccaagcc 462 || || |||| || ||||||||||||| |||||| | ||||||| | || |||| Sbjct: 430 gcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgagcc 489 Query: 463 gggcgtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctcttc 514 ||||| |||||||| |||||||||||| | | |||||||||||||||||| Sbjct: 490 -ggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttc 540
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 155 bits (78), Expect = 2e-34 Identities = 286/352 (81%), Gaps = 5/352 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 28086395 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 28086454 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 28086455 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 28086511 Query: 284 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 28086512 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 28086571 Query: 344 ggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccaac 403 | ||||||| |||||||||||||||| | ||| || |||||| ||||| ||||| Sbjct: 28086572 tacatccccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaac 28086631 Query: 404 cgatcggcgctcgacctcttcgaccacctctggaactcctacttcggcgg-gtccaagcc 462 || || |||| || ||||||||||||| |||||| | ||||||| | || |||| Sbjct: 28086632 gcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgagcc 28086691 Query: 463 gggcgtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctcttc 514 ||||| |||||||| |||||||||||| | | |||||||||||||||||| Sbjct: 28086692 -ggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttc 28086742 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28102117 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28102176 Query: 369 gcggctacggcaccggctactcgctccc 396 ||||| | ||| ||| ||||||||||| Sbjct: 28102177 gcggccagggcggcgggtactcgctccc 28102204 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 28093676 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 28093735 Query: 369 gcggc 373 ||||| Sbjct: 28093736 gcggc 28093740 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 28107962 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 28108021 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 28108022 gaacatcttcgtcttcctctccatcggcggc 28108052 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 28113517 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 28113458 Query: 343 gggcgtccccgtctccctctccatcggcggctacggc 379 | | |||||||| ||||||| |||||||| ||||| Sbjct: 28113457 gaacatccccgtcctcctctccgtcggcggcgacggc 28113421 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 28081566 ctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtcc 28081507 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 ||||||||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 28081506 aagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 28081451 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 28076864 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 28076805 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 28076804 aagggcgtctacatgctcctctccatcggcggcgacggc 28076766 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 28090045 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28090104 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 28090105 caagggcatcgtcgtgctcctctccatcggcggc 28090138 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 28083473 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 28083532 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 || |||| || |||| |||||| ||||||||| Sbjct: 28083533 caggggcatcaccgtgctcctctcaatcggcggc 28083566 Score = 63.9 bits (32), Expect = 6e-07 Identities = 78/94 (82%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||||||||||| |||||||| | ||||||| ||||||||||||||||||| Sbjct: 28089333 cctcgacctctccggscacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 28089392 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 28089393 caagggcatcgtcgtgctcctctccatcggcggc 28089426 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 28110751 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 28110692 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 28110691 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 28110647 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 28110590 cgtcggcgccgacatcaagcactgccag 28110563 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 472 ccgccctttcggcgacgcgtggctcgacggcgtcgacctct 512 |||||| ||||||||||| |||||||||||||||||||| Sbjct: 28113328 ccgccccttcggcgacgccgtgctcgacggcgtcgacctct 28113288 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 28115059 cgtcggcgccgacgtcaagcactgcca 28115033 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 471 cccgccctttcggcgacgcgtggctcgacggcgtcgac 508 ||||||| ||||||||||| |||||||||||||||| Sbjct: 28114895 cccgcccgttcggcgacgccgtgctcgacggcgtcgac 28114858 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 28107825 ggaaagaccgggcagatgaccgtgttctgggg 28107856
>dbj|D55708.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1049 Score = 155 bits (78), Expect = 2e-34 Identities = 286/352 (81%), Gaps = 5/352 (1%) Strand = Plus / Plus Query: 164 gtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatg 223 ||||||||||| ||||| |||| |||||| || || ||||||||||||||| ||||| | Sbjct: 135 gtgttctggggccggaacaaggacgagggctctctccgtgaggcctgcgacaccggcctc 194 Query: 224 tacaccatggtcaccatgtccttcctcgacgtctttggcgccaacggcaagtaccacctc 283 |||||| |||| ||| |||||||||| |||||| ||| ||||| ||| |||| Sbjct: 195 tacacctccgtcatcatctccttcctcgccgtcttcggcc---acggccgctactccctc 251 Query: 284 gacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaag 343 |||||||||||||||||| | ||| |||||||||||||||||||||||||||||| |||| Sbjct: 252 gacctctccggccacgacgtctccgccgtcggcgccgacatcaagcactgccagtccaag 311 Query: 344 ggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctcccatccaac 403 | ||||||| |||||||||||||||| | ||| || |||||| ||||| ||||| Sbjct: 312 tacatccccgtgctcctctccatcggcggccagggcggcgcctactccctccccaccaac 371 Query: 404 cgatcggcgctcgacctcttcgaccacctctggaactcctacttcggcgg-gtccaagcc 462 || || |||| || ||||||||||||| |||||| | ||||||| | || |||| Sbjct: 372 gcctccgccgccgacgtcgccgaccacctctgggactccttcctcggcggcggccgagcc 431 Query: 463 gggcgtcccccgccctttcggcgacgcgtggctcgacggcgtcgacctcttc 514 ||||| |||||||| |||||||||||| | | |||||||||||||||||| Sbjct: 432 -ggcgtgccccgccccttcggcgacgcggtggtggacggcgtcgacctcttc 482
>dbj|AB027426.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-g), partial cds, clone:C63579 Length = 383 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 245 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 304 Query: 369 gcggctacggcaccggctactcgctccc 396 ||||| | ||| ||| ||||||||||| Sbjct: 305 gcggccagggcggcgggtactcgctccc 332
>dbj|AK058882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B10, full insert sequence Length = 1019 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||| Sbjct: 290 ccgtcggcgccgacatcaagcactgccagtccaagggcgtccaggtcctcctctccatcg 349 Query: 369 gcggc 373 ||||| Sbjct: 350 gcggc 354
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10, complete sequence Length = 181130 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 163 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 222 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 59972 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 60031 Query: 223 gtacaccatggtcaccatgtccttcctc 250 |||| || |||| ||| ||||||||| Sbjct: 60032 ctacaacaccgtcatcatctccttcctc 60059 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 15063 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 15004 Query: 348 tccccgtctccctctccatcggcggc 373 ||| |||| |||| ||||||||||| Sbjct: 15003 tcctcgtcctcctcgccatcggcggc 14978 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| | Sbjct: 71250 ctcgacatctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtcc 71309 Query: 341 aaggg 345 ||||| Sbjct: 71310 aaggg 71314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 15167 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 15108 Query: 247 cctc 250 |||| Sbjct: 15107 cctc 15104 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 170 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 229 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 93520 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 93579 Query: 230 atggtcaccatgtccttcctc 250 | |||| ||| ||||||||| Sbjct: 93580 accgtcatcatttccttcctc 93600 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggc 346 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 93662 ccgtcggccccgacatcaagtactgccaatccaagggc 93699 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 cgaccacctctggaactcctacttcggcgg 453 ||||||||||||| |||||||| ||||||| Sbjct: 71393 cgaccacctctggtactcctacctcggcgg 71422 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 425 gaccacctctggaactcctacttcggcgg 453 |||||||||||| |||||||| ||||||| Sbjct: 93778 gaccacctctggtactcctacctcggcgg 93806 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 220 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 71134 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 71186
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 163 ggtgttctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcat 222 |||||||||||| ||||| ||||||||||| ||||| ||||||||||||||| ||||| | Sbjct: 8848047 ggtgttctggggccggaacaaggccgagggctccctccgtgaggcctgcgacaccggcct 8848106 Query: 223 gtacaccatggtcaccatgtccttcctc 250 |||| || |||| ||| ||||||||| Sbjct: 8848107 ctacaacaccgtcatcatctccttcctc 8848134 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 8803138 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 8803079 Query: 348 tccccgtctccctctccatcggcggc 373 ||| |||| |||| ||||||||||| Sbjct: 8803078 tcctcgtcctcctcgccatcggcggc 8803053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| | Sbjct: 8859325 ctcgacatctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtcc 8859384 Query: 341 aaggg 345 ||||| Sbjct: 8859385 aaggg 8859389 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 8803242 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 8803183 Query: 247 cctc 250 |||| Sbjct: 8803182 cctc 8803179 Score = 50.1 bits (25), Expect = 0.008 Identities = 67/81 (82%) Strand = Plus / Plus Query: 170 tggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggcatgtacacc 229 ||||||||||| |||| |||||| ||||| | ||||||||||| ||||| | |||||| Sbjct: 8881595 tggggacggaacaaggacgagggctccctcagggaggcctgcgataccggcctctacacc 8881654 Query: 230 atggtcaccatgtccttcctc 250 | |||| ||| ||||||||| Sbjct: 8881655 accgtcatcatttccttcctc 8881675 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggc 346 |||||||| ||||||||||| ||||||| | ||||||| Sbjct: 8881737 ccgtcggccccgacatcaagtactgccaatccaagggc 8881774 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 cgaccacctctggaactcctacttcggcgg 453 ||||||||||||| |||||||| ||||||| Sbjct: 8859468 cgaccacctctggtactcctacctcggcgg 8859497 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 425 gaccacctctggaactcctacttcggcgg 453 |||||||||||| |||||||| ||||||| Sbjct: 8881853 gaccacctctggtactcctacctcggcgg 8881881 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 220 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 8859209 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 8859261
>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full insert sequence Length = 1176 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 334 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 393 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 394 gaacatcttcgtcttcctctccatcggcggc 424 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 197 ggaaagaccgggcagatgaccgtgttctgggg 228
>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full insert sequence Length = 1234 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 335 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 394 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 395 gaacatcttcgtcttcctctccatcggcggc 425 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 198 ggaaagaccgggcagatgaccgtgttctgggg 229
>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1220 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 309 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 368 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 369 gaacatcttcgtcttcctctccatcggcggc 399 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 172 ggaaagaccgggcagatgaccgtgttctgggg 203
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C60571 Length = 1220 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 321 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 380 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 381 gaacatcttcgtcttcctctccatcggcggc 411 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 184 ggaaagaccgggcagatgaccgtgttctgggg 215
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C11701 Length = 1171 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 279 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 338 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 339 gaacatcttcgtcttcctctccatcggcggc 369 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 142 ggaaagaccgggcagatgaccgtgttctgggg 173
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C12269 Length = 1214 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 319 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 378 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 379 gaacatcttcgtcttcctctccatcggcggc 409 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 182 ggaaagaccgggcagatgaccgtgttctgggg 213
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds, clone:C3540 Length = 1229 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 318 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 377 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 378 gaacatcttcgtcttcctctccatcggcggc 408 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 181 ggaaagaccgggcagatgaccgtgttctgggg 212
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a), complete cds,clone:C10295 Length = 1199 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 300 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 359 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 360 gaacatcttcgtcttcctctccatcggcggc 390 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 163 ggaaagaccgggcagatgaccgtgttctgggg 194
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase homologue (OsChib3H-a)H-, complete cds, clone:C60129 Length = 1187 Score = 77.8 bits (39), Expect = 4e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct: 303 cgacctctccggccacgacctccgcgtcatcggcgccgacatcaagcactgccagtccaa 362 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | | || ||||| |||||||||||||||| Sbjct: 363 gaacatcttcgtcttcctctccatcggcggc 393 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 143 ggaaagaccggccaggtgacggtgttctgggg 174 ||||||||||| ||| |||| ||||||||||| Sbjct: 166 ggaaagaccgggcagatgaccgtgttctgggg 197
>dbj|AK102505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095E15, full insert sequence Length = 1166 Score = 73.8 bits (37), Expect = 6e-10 Identities = 82/97 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 |||||||||||||||||| | ||| |||||||||||| ||||||||||||||| ||| Sbjct: 259 cgacctctccggccacgatgtctcccgagtcggcgccgacgtcaagcactgccagtccaa 318 Query: 343 gggcgtccccgtctccctctccatcggcggctacggc 379 | | |||||||| ||||||| |||||||| ||||| Sbjct: 319 gaacatccccgtcctcctctccgtcggcggcgacggc 355 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 472 ccgccctttcggcgacgcgtggctcgacggcgtcgacctct 512 |||||| ||||||||||| |||||||||||||||||||| Sbjct: 448 ccgccccttcggcgacgccgtgctcgacggcgtcgacctct 488
>ref|XM_476387.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 169 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 228 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 229 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 284
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 56342 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 56283 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 56282 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 56227
>dbj|AK103295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A18, full insert sequence Length = 1317 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 318 ctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtcc 377 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 ||||||||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 378 aagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 433
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| || || ||||||| |||||||||||||||||||||| | Sbjct: 8090 ctcgacatctccggccacccgctcgccgccgtcggtgccgacatcaagcactgccagtcc 8031 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 | |||| || |||| |||||||||||||||| | ||| ||||||||| ||||| Sbjct: 8030 aggggcatcaccgtgctcctctccatcggcggccagggcggcggctactccctccc 7975
>dbj|AB027424.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-c), complete cds, clone:C12024 Length = 1148 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| |||||||||||||||| |||||||||| | Sbjct: 270 ctcgacctctccggccacgacctccgagacgtcggcgccgacatccgccactgccagtcc 329 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggcaccggctactcgctccc 396 ||||||||| | | |||||||||||||||| ||||| ||||||||| ||||| Sbjct: 330 aagggcgtctacatgctcctctccatcggcggcgacggcgacggctactccctccc 385
>ref|XM_483351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 288 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 347 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 348 ggccgtctacgtcctcctctccatcggcggc 378
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 25755501 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 25755560 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 25755561 ggccgtctacgtcctcctctccatcggcggc 25755591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | |||||||||||| |||||||||||| | ||| Sbjct: 25771901 cgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaa 25771842 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | || |||||| |||||||||||||||| Sbjct: 25771841 acacatctccgtcttcctctccatcggcggc 25771811 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 268 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 25752413 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 25752354 Query: 328 gcactgccag 337 ||||||||| Sbjct: 25752353 ccactgccag 25752344 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 358 cctctccatcggcggctacggcaccggctactcgctccc 396 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 25752320 cctcgccatcggcggctacggcggcggatactcgctccc 25752282
>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0689E12 Length = 147516 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 27712 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 27771 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 27772 ggccgtctacgtcctcctctccatcggcggc 27802 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | |||||||||||| |||||||||||| | ||| Sbjct: 44112 cgacctctccggccacgacctccgcccaatcggcgccgacaacaagcactgccaatccaa 44053 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 | || |||||| |||||||||||||||| Sbjct: 44052 acacatctccgtcttcctctccatcggcggc 44022 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 268 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 24624 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 24565 Query: 328 gcactgccag 337 ||||||||| Sbjct: 24564 ccactgccag 24555 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 358 cctctccatcggcggctacggcaccggctactcgctccc 396 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 24531 cctcgccatcggcggctacggcggcggatactcgctccc 24493
>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0700D12 Length = 145177 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 133249 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 133308 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 133309 ggccgtctacgtcctcctctccatcggcggc 133339 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 268 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 130161 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 130102 Query: 328 gcactgccag 337 ||||||||| Sbjct: 130101 ccactgccag 130092 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 358 cctctccatcggcggctacggcaccggctactcgctccc 396 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 130068 cctcgccatcggcggctacggcggcggatactcgctccc 130030
>dbj|AK122053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114G24, full insert sequence Length = 2161 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 1139 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 1198 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 1199 aagggcgtctacatgctcctctccatcggcggcgacggc 1237
>dbj|AK073757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068O15, full insert sequence Length = 1281 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 259 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 318 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 319 aagggcgtctacatgctcctctccatcggcggcgacggc 357
>dbj|AK073267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025L23, full insert sequence Length = 1368 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 288 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 347 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 348 ggccgtctacgtcctcctctccatcggcggc 378
>dbj|D55714.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1167 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 239 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 298 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 299 aagggcgtctacatgctcctctccatcggcggcgacggc 337
>dbj|D55709.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1191 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 267 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 326 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 327 ggccgtctacgtcctcctctccatcggcggc 357
>dbj|AB027425.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-d), complete cds, clone:C12856 Length = 1284 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 283 cgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaa 342 ||||||||||||||||||||| | | ||||||||||||||| |||||||| ||||| Sbjct: 288 cgacctctccggccacgacctccgccacatcggcgccgacatcacccactgccatttcaa 347 Query: 343 gggcgtccccgtctccctctccatcggcggc 373 || |||| |||| |||||||||||||||| Sbjct: 348 ggccgtctacgtcctcctctccatcggcggc 378
>dbj|AB027423.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), partial cds, clone:C62532 Length = 989 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 221 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 280 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 281 aagggcgtctacatgctcctctccatcggcggcgacggc 319
>dbj|AB027422.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C62515 Length = 996 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 225 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 284 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 285 aagggcgtctacatgctcctctccatcggcggcgacggc 323
>dbj|AB027421.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-b), complete cds, clone:C60416 Length = 1416 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 ||||||||||||||||||||||| | |||||||||||||||| |||||||||| | Sbjct: 235 ctcgacctctccggccacgaccttcgcgacgtcggcgccgacatccgccactgccagtcc 294 Query: 341 aagggcgtccccgtctccctctccatcggcggctacggc 379 ||||||||| | | |||||||||||||||| ||||| Sbjct: 295 aagggcgtctacatgctcctctccatcggcggcgacggc 333
>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H06, complete sequence Length = 144457 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Minus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 135580 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 135521 Query: 348 tccccgtctccctctccatcggcggc 373 ||| |||| |||| ||||||||||| Sbjct: 135520 tcctcgtcctcctcgccatcggcggc 135495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 135684 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 135625 Query: 247 cctc 250 |||| Sbjct: 135624 cctc 135621
>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full insert sequence Length = 1076 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 289 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 348 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 349 caagggcatcgtcgtgctcctctccatcggcggc 382
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full insert sequence Length = 1008 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 197 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 256 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 || |||| || |||| |||||| ||||||||| Sbjct: 257 caggggcatcaccgtgctcctctcaatcggcggc 290
>dbj|AK065866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045O11, full insert sequence Length = 1198 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 288 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 347 Query: 348 tccccgtctccctctccatcggcggc 373 ||| |||| |||| ||||||||||| Sbjct: 348 tcctcgtcctcctcgccatcggcggc 373 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 184 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 243 Query: 247 cctc 250 |||| Sbjct: 244 cctc 247
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full insert sequence Length = 1150 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 244 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 303 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 || |||| || |||| |||||| ||||||||| Sbjct: 304 caggggcatcaccgtgctcctctcaatcggcggc 337
>dbj|AK062114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C02, full insert sequence Length = 1199 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 288 tctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttcaagggcg 347 ||||||||||| | | ||| |||||||| ||||||||||||||||||||| || |||| Sbjct: 287 tctccggccacaccgtctccgccgtcggccccgacatcaagcactgccagtccaggggca 346 Query: 348 tccccgtctccctctccatcggcggc 373 ||| |||| |||| ||||||||||| Sbjct: 347 tcctcgtcctcctcgccatcggcggc 372 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 187 cgaggggtccctgcgtgaggcctgcgactccggcatgtacaccatggtcaccatgtcctt 246 |||||||||||| |||||||| |||||| ||||| | ||||||| |||| ||| ||||| Sbjct: 183 cgaggggtccctccgtgaggcgtgcgacaccggcctctacaccaccgtcatcatctcctt 242 Query: 247 cctc 250 |||| Sbjct: 243 cctc 246
>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete cds Length = 1145 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 |||||||||||||||||||||||| | ||||||| ||||||||||||||||||| Sbjct: 267 cctcgacctctccggccacgacctccgccgcgtcggcaacgacatcaagcactgccagcg 326 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 ||||||| || ||| |||||||||||||||| Sbjct: 327 caagggcatcgtcgtgctcctctccatcggcggc 360
>dbj|AB027427.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-h), partial cds, clone:S2321 Length = 500 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 280 cctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagtt 339 ||||||| ||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 271 cctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtc 330 Query: 340 caagggcgtccccgtctccctctccatcggcggc 373 || |||| || |||| |||||| ||||||||| Sbjct: 331 caggggcatcaccgtgctcctctcaatcggcggc 364
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 65.9 bits (33), Expect = 1e-07 Identities = 78/93 (83%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| || || |||||||||||||||||||||||||||||| | Sbjct: 76028 ctcgacatctccggccacccgctcgccgccgtcggcgccgacatcaagcactgccagtcc 76087 Query: 341 aagggcgtccccgtctccctctccatcggcggc 373 | |||| || |||| ||| |||||||||||| Sbjct: 76088 aggggcatcaccgtgctcctgtccatcggcggc 76120
>ref|XM_483350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 894 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 268 cggcaagtaccacctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaa 327 |||||| ||| |||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 225 cggcaactacaacctcgacatctccggccatgacgtcaccgccgtcggcgccgacatcat 284 Query: 328 gcactgccag 337 ||||||||| Sbjct: 285 ccactgccag 294 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 358 cctctccatcggcggctacggcaccggctactcgctccc 396 |||| ||||||||||||||||| ||| ||||||||||| Sbjct: 318 cctcgccatcggcggctacggcggcggatactcgctccc 356
>dbj|AK106678.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-A12, full insert sequence Length = 938 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 762 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 703 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 702 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 658 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 601 cgtcggcgccgacatcaagcactgccag 574
>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full insert sequence Length = 1152 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacctgtcctccgtcggcgccgacatcaagcactgccagttc 340 |||||| ||||||||||| | | ||| |||||||| ||||||||||| ||||||||| | Sbjct: 276 ctcgacatctccggccaccaggtctccgccgtcggccccgacatcaagtactgccagtcc 335 Query: 341 aaggg 345 ||||| Sbjct: 336 aaggg 340 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 424 cgaccacctctggaactcctacttcggcgg 453 ||||||||||||| |||||||| ||||||| Sbjct: 419 cgaccacctctggtactcctacctcggcgg 448 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 168 tctggggacggaataaggccgaggggtccctgcgtgaggcctgcgactccggc 220 ||||||| ||||| |||| |||||| ||||| | |||||||||||| ||||| Sbjct: 160 tctggggccggaacaaggacgagggctccctcagggaggcctgcgacgccggc 212
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full insert sequence Length = 1161 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 146 aagaccggccaggtgacggtgttctggggacggaataaggccgaggggtccctgcgtgag 205 ||||||||| || | || || |||||||| ||||| |||| |||||| || || || ||| Sbjct: 175 aagaccggcgagctcaccgtcttctggggccggaacaaggacgagggctctctccgggag 234 Query: 206 gcctgcgactccggcatgtacaccatggtcaccatgtccttcctc 250 ||||||||| ||||||| |||| || |||| ||| ||||||||| Sbjct: 235 gcctgcgacaccggcatctacaacaccgtcatcatctccttcctc 279 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgccag 337 |||||||||||||||||||||||||||| Sbjct: 336 cgtcggcgccgacatcaagcactgccag 363
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840850 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840791 Query: 369 gcggctacggcaccggctactcgctcc 395 || || | ||| ||||||||| |||| Sbjct: 10840790 gcagccagggcggcggctactccctcc 10840764 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcctacccctcctctccgtcgtcg 104 |||| ||||||||||||||||||| Sbjct: 3257666 tcctccccctcctctccgtcgtcg 3257643
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 10840549 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 10840490 Query: 369 gcggctacggcaccggctactcgctcc 395 || || | ||| ||||||||| |||| Sbjct: 10840489 gcagccagggcggcggctactccctcc 10840463 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcctacccctcctctccgtcgtcg 104 |||| ||||||||||||||||||| Sbjct: 3257611 tcctccccctcctctccgtcgtcg 3257588
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 54.0 bits (27), Expect = 5e-04 Identities = 72/87 (82%) Strand = Plus / Minus Query: 309 ccgtcggcgccgacatcaagcactgccagttcaagggcgtccccgtctccctctccatcg 368 |||| ||||| ||||||||||||||||||| || |||| || |||| ||||||||||| Sbjct: 107199 ccgttggcgctgacatcaagcactgccagtccaggggcatcaccgtgctcctctccatcg 107140 Query: 369 gcggctacggcaccggctactcgctcc 395 || || | ||| ||||||||| |||| Sbjct: 107139 gcagccagggcggcggctactccctcc 107113
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcacc 382 |||||||||||||||| || |||| || |||| |||||||||||||||| | ||| | Sbjct: 7513706 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcggccagggcggc 7513765 Query: 383 ggctactcgctccc 396 |||||||| ||||| Sbjct: 7513766 ggctactccctccc 7513779 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 ggcgtcccccgccctttcggcgac 487 ||||| |||||||||||||||||| Sbjct: 15499663 ggcgtgccccgccctttcggcgac 15499640
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 323 atcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggctacggcacc 382 |||||||||||||||| || |||| || |||| |||||||||||||||| | ||| | Sbjct: 107412 atcaagcactgccagtccaggggcatcaccgtgctcctctccatcggcggccagggcggc 107471 Query: 383 ggctactcgctccc 396 |||||||| ||||| Sbjct: 107472 ggctactccctccc 107485
>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase inhibitor protein Length = 2143 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgccagt 338 |||||| |||||||||||||||||||||| Sbjct: 1266 cgtcggtgccgacatcaagcactgccagt 1294
>ref|NM_186678.1| Oryza sativa (japonica cultivar-group), mRNA Length = 897 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 ||||||||||||||||||||||| |||| Sbjct: 778 cgtcggcgccgacatcaagcactaccag 751
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10 Length = 200968 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 310 cgtcggcgccgacatcaagcactgccag 337 ||||||||||||||||||||||| |||| Sbjct: 165275 cgtcggcgccgacatcaagcactaccag 165248
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full insert sequence Length = 1162 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 312 cgtcggcgccgacgtcaagcactgcca 338 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 471 cccgccctttcggcgacgcgtggctcgacggcgtcgac 508 ||||||| ||||||||||| |||||||||||||||| Sbjct: 476 cccgcccgttcggcgacgccgtgctcgacggcgtcgac 513
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full insert sequence Length = 1193 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 316 cgtcggcgccgacgtcaagcactgcca 342 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 471 cccgccctttcggcgacgcgtggctcgacggcgtcgac 508 ||||||| ||||||||||| |||||||||||||||| Sbjct: 480 cccgcccgttcggcgacgccgtgctcgacggcgtcgac 517
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full insert sequence Length = 1153 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgtcggcgccgacatcaagcactgcca 336 ||||||||||||| ||||||||||||| Sbjct: 303 cgtcggcgccgacgtcaagcactgcca 329 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 471 cccgccctttcggcgacgcgtggctcgacggcgtcgac 508 ||||||| ||||||||||| |||||||||||||||| Sbjct: 467 cccgcccgttcggcgacgccgtgctcgacggcgtcgac 504
>dbj|AK067962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123G23, full insert sequence Length = 1308 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 ctcgacctctccggccacgacct 303 ||||||||||||||||||||||| Sbjct: 259 ctcgacctctccggccacgacct 281
>ref|XM_477712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 810 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 324 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggc 373 ||||| |||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 167 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcggc 216
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 540 gctacgacgtgctggcgctgga 561 |||||||||||||||||||||| Sbjct: 2513068 gctacgacgtgctggcgctgga 2513089
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 122 ccgccggccttggcggcggggg 143 |||||||||||||||||||||| Sbjct: 5464807 ccgccggccttggcggcggggg 5464828
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 562 gctggccaagcacaacatccgc 583 |||||||||||||||||||||| Sbjct: 1738066 gctggccaagcacaacatccgc 1738045
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0684A03 Length = 64705 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 324 tcaagcactgccagttcaagggcgtccccgtctccctctccatcggcggc 373 ||||| |||||| || ||||||||||| |||| |||||| ||||||||| Sbjct: 42745 tcaagtactgccggtccaagggcgtcctcgtcctcctctctatcggcggc 42794
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 540 gctacgacgtgctggcgctgga 561 |||||||||||||||||||||| Sbjct: 127805 gctacgacgtgctggcgctgga 127784
>ref|XM_462852.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 480 tcggcgacgcgtggctcgacggcgtcgac 508 ||||||||||| |||||||||||||||| Sbjct: 449 tcggcgacgcggtgctcgacggcgtcgac 477
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 486 acgcgtggctcgacggcgtcg 506 ||||||||||||||||||||| Sbjct: 597785 acgcgtggctcgacggcgtcg 597765
>ref|XM_754996.1| Ustilago maydis 521 hypothetical protein (UM03942.1) partial mRNA Length = 4143 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 tggcgctggagctggccaagcacaa 576 ||||||| ||||||||||||||||| Sbjct: 3059 tggcgctcgagctggccaagcacaa 3083
>ref|XM_568289.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM01940) partial mRNA Length = 1466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 486 acgcgtggctcgacggcgtcg 506 ||||||||||||||||||||| Sbjct: 335 acgcgtggctcgacggcgtcg 355
>gb|AC139154.3| Mus musculus chromosome 7 clone RP24-356B8, complete sequence Length = 164774 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 323 atcaagcactgccagttcaag 343 ||||||||||||||||||||| Sbjct: 129440 atcaagcactgccagttcaag 129420
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 309 ccgtcggcgccgacatcaagc 329 ||||||||||||||||||||| Sbjct: 2649855 ccgtcggcgccgacatcaagc 2649875
>emb|Z68893.1|HLHOLLIGN H.lanatus mRNA for Hol l I protein Length = 1086 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 taccacctcgacctctccggccacg 299 |||||| |||||||||||||||||| Sbjct: 333 taccacttcgacctctccggccacg 357
>emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and flanking genes, strain A15101 Length = 24798 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 560 gagctggccaagcacaacatc 580 ||||||||||||||||||||| Sbjct: 5370 gagctggccaagcacaacatc 5350
>gb|AE011877.1| Xanthomonas axonopodis pv. citri str. 306, section 255 of 469 of the complete genome Length = 12615 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 catcggcggctacggcaccggctac 388 |||||||||| |||||||||||||| Sbjct: 6508 catcggcggcgacggcaccggctac 6484
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 480 tcggcgacgcgtggctcgacggcgtcgac 508 ||||||||||| |||||||||||||||| Sbjct: 11207188 tcggcgacgcggtgctcgacggcgtcgac 11207216 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 541 ctacgacgtgctggcgctggagct 564 |||||||| ||||||||||||||| Sbjct: 6182566 ctacgacgggctggcgctggagct 6182543
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 gctacgacgtgctggcgctggagct 564 ||||||||||| ||||||||||||| Sbjct: 772349 gctacgacgtgatggcgctggagct 772325
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 ctctccatcggcggctacggc 379 ||||||||||||||||||||| Sbjct: 1796308 ctctccatcggcggctacggc 1796328
>dbj|AP003206.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1146F03 Length = 137047 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 480 tcggcgacgcgtggctcgacggcgtcgac 508 ||||||||||| |||||||||||||||| Sbjct: 98981 tcggcgacgcggtgctcgacggcgtcgac 99009
>dbj|AB103332.1| Nocardiopsis sp. F96 chiF1 gene for chitinase F1, complete cds Length = 1294 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 495 tcgacggcgtcgacctcttcctggagcacggca 527 |||||||||||||| || |||||||||||||| Sbjct: 673 tcgacggcgtcgacatcgacctggagcacggca 705
>emb|X78813.1|PPPHLPI P.pratense mRNA for Phl pI allergen Length = 1066 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 taccacctcgacctctccggccacg 299 |||||| |||||||||||||||||| Sbjct: 376 taccacttcgacctctccggccacg 400
>dbj|AK062603.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-G12, full insert sequence Length = 1239 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 480 tcggcgacgcgtggctcgacggcgtcgac 508 ||||||||||| |||||||||||||||| Sbjct: 540 tcggcgacgcggtgctcgacggcgtcgac 568
>gb|AY241677.1| Dactylis glomerata group 1 allergen Dac g 1.02 precursor, mRNA, complete cds Length = 795 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 taccacctcgacctctccggccacg 299 |||||| |||||||||||||||||| Sbjct: 379 taccacttcgacctctccggccacg 403
>gb|AY241676.1| Dactylis glomerata group 1 allergen Dac g 1.01 precursor, mRNA, partial cds Length = 723 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 taccacctcgacctctccggccacg 299 |||||| |||||||||||||||||| Sbjct: 307 taccacttcgacctctccggccacg 331
>dbj|AP002881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035H10 Length = 109475 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 480 tcggcgacgcgtggctcgacggcgtcgac 508 ||||||||||| |||||||||||||||| Sbjct: 105921 tcggcgacgcggtgctcgacggcgtcgac 105949
>gb|AC149062.3| Mus musculus BAC clone RP23-183E20 from 7, complete sequence Length = 229956 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 323 atcaagcactgccagttcaag 343 ||||||||||||||||||||| Sbjct: 134029 atcaagcactgccagttcaag 134049
>gb|AY543539.1| Triticum aestivum expansin EXPB4 mRNA, complete cds Length = 825 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 275 taccacctcgacctctccggccacg 299 |||||| |||||||||||||||||| Sbjct: 389 taccacttcgacctctccggccacg 413
>ref|NM_188421.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 ctacgacgtgctggcgctggagct 564 |||||||| ||||||||||||||| Sbjct: 129 ctacgacgggctggcgctggagct 152
>ref|XM_465482.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1050 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 464 ggcgtcccccgccctttcggcgac 487 ||||| |||||||||||||||||| Sbjct: 922 ggcgtgccccgccctttcggcgac 945
>ref|NM_001031391.1| Gallus gallus ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (ATP5B), mRNA Length = 1735 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccggccttggcggcggggg 143 |||||||||||||||||||| Sbjct: 217 gccggccttggcggcggggg 198
>ref|XM_478063.1| Oryza sativa (japonica cultivar-group), mRNA Length = 429 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgtgcctcctacccctcctctccg 98 |||||||||||| ||||||||||| Sbjct: 322 cgtgcctcctactcctcctctccg 299
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 cggcgtcgacctcttcctgg 518 |||||||||||||||||||| Sbjct: 1675110 cggcgtcgacctcttcctgg 1675091
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 gctggcgctggagctggcca 569 |||||||||||||||||||| Sbjct: 1671218 gctggcgctggagctggcca 1671199
>emb|AL139330.17| Human DNA sequence from clone RP11-266C7 on chromosome 6q25.2-26 Contains the SYNJ2 gene for synaptojanin 2 (inositol phosphate 5'-phosphatase 2, INPP5H) (contains FLJ23714 and DKFZp761E1512), a novel gene and the 3' end of the SNX9 gene for sorting nexin 9 (SH3 and PX domain-containing protein (SH3PX1, SDP1), FLJ22984). Contains two CpG islands, complete sequence Length = 160974 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 cttcctggagcacggcacac 530 |||||||||||||||||||| Sbjct: 76056 cttcctggagcacggcacac 76075
>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16 Length = 347786 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 gtgctggcgctggagctggc 567 |||||||||||||||||||| Sbjct: 336008 gtgctggcgctggagctggc 336027
>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14 Length = 349146 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 gtgctggcgctggagctggc 567 |||||||||||||||||||| Sbjct: 334093 gtgctggcgctggagctggc 334112
>gb|AC119275.12| Mus musculus chromosome 8, clone RP24-459A4, complete sequence Length = 203937 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aacaagagaccaaagctact 25 |||||||||||||||||||| Sbjct: 73383 aacaagagaccaaagctact 73402
>emb|CR450738.8| Zebrafish DNA sequence from clone DKEY-71L10 in linkage group 8, complete sequence Length = 101924 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 ctccatcggcggctacggcaccggctac 388 ||||||| |||||||||||| ||||||| Sbjct: 23584 ctccatcagcggctacggcagcggctac 23611
>emb|AJ719809.1| Gallus gallus mRNA for hypothetical protein, clone 6l18 Length = 1735 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 gccggccttggcggcggggg 143 |||||||||||||||||||| Sbjct: 217 gccggccttggcggcggggg 198
>emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8, complete sequence Length = 227074 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 361 ctccatcggcggctacggcaccggctac 388 ||||||| |||||||||||| ||||||| Sbjct: 59150 ctccatcagcggctacggcagcggctac 59123
>ref|NM_205481.1| Gallus gallus lysyl oxidase (LOX), mRNA Length = 1263 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggctacggcaccggctact 389 |||||||||||||||||||| Sbjct: 612 cggctacggcaccggctact 631
>emb|BX470186.11| Zebrafish DNA sequence from clone DKEY-52I22 in linkage group 18, complete sequence Length = 131089 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 agtaccacctcgacctctcc 292 |||||||||||||||||||| Sbjct: 100001 agtaccacctcgacctctcc 99982
>emb|BX248392.16| Zebrafish DNA sequence from clone CH211-220F12 in linkage group 18, complete sequence Length = 183594 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 agtaccacctcgacctctcc 292 |||||||||||||||||||| Sbjct: 53054 agtaccacctcgacctctcc 53073
>gb|AE006031.1| Caulobacter crescentus CB15 section 357 of 359 of the complete genome Length = 10388 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 cgacctcttcctggagcacg 524 |||||||||||||||||||| Sbjct: 166 cgacctcttcctggagcacg 147
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 481 cggcgacgcgtggctcgacg 500 |||||||||||||||||||| Sbjct: 2989171 cggcgacgcgtggctcgacg 2989190
>ref|XM_703987.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 2 (LOC566182), mRNA Length = 2401 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 ctccatcggcggctacggcaccggctac 388 ||||||| |||||||||||| ||||||| Sbjct: 2160 ctccatcagcggctacggcagcggctac 2187
>ref|XM_683218.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 1 (LOC566182), mRNA Length = 2392 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 ctccatcggcggctacggcaccggctac 388 ||||||| |||||||||||| ||||||| Sbjct: 2151 ctccatcagcggctacggcagcggctac 2178
>ref|XM_682127.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 1 (LOC564451), mRNA Length = 2371 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 ctccatcggcggctacggcaccggctac 388 ||||||| |||||||||||| ||||||| Sbjct: 2130 ctccatcagcggctacggcagcggctac 2157
>ref|XM_703603.1| PREDICTED: Danio rerio similar to Orphan sodium- and chloride-dependent neurotransmitter transporter NTT4 (Solute carrier family 6 member 17), transcript variant 2 (LOC564451), mRNA Length = 2260 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 361 ctccatcggcggctacggcaccggctac 388 ||||||| |||||||||||| ||||||| Sbjct: 2019 ctccatcagcggctacggcagcggctac 2046
>dbj|AB053207.1| Flavobacterium sp. SK1022 gene for endo-beta-N-acetylglucosaminidase, complete cds Length = 945 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 ggctcgacggcgtcgacctc 511 |||||||||||||||||||| Sbjct: 497 ggctcgacggcgtcgacctc 516
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 541 ctacgacgtgctggcgctggagct 564 |||||||| ||||||||||||||| Sbjct: 44764 ctacgacgggctggcgctggagct 44741
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 410 gcgctcgacctcttcgaccacctc 433 |||||||||||| ||||||||||| Sbjct: 991049 gcgctcgacctcctcgaccacctc 991072
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 cccctcctctccgtcgtcgctgcc 109 ||||||||||||||||||| |||| Sbjct: 171493 cccctcctctccgtcgtcgttgcc 171470
>dbj|AP005181.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0016H06 Length = 148158 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 cgtgcctcctacccctcctctccg 98 |||||||||||| ||||||||||| Sbjct: 73267 cgtgcctcctactcctcctctccg 73244
>dbj|AP005068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0644G05 Length = 143119 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 464 ggcgtcccccgccctttcggcgac 487 ||||| |||||||||||||||||| Sbjct: 27223 ggcgtgccccgccctttcggcgac 27200
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tcgacctctccggccacgac 301 |||||||||||||||||||| Sbjct: 77566 tcgacctctccggccacgac 77585
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 tcctacccctcctctccgtcgtcg 104 |||| ||||||||||||||||||| Sbjct: 48052 tcctccccctcctctccgtcgtcg 48029
>gb|M97881.1|CHKLOX Gallus gallus domesticus aortic lysyl oxidase mRNA, complete cds Length = 1263 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cggctacggcaccggctact 389 |||||||||||||||||||| Sbjct: 612 cggctacggcaccggctact 631
>dbj|D21126.1| Homo sapiens DNA for repeat sequence Alu Length = 2220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 cttcctggagcacggcacac 530 |||||||||||||||||||| Sbjct: 1696 cttcctggagcacggcacac 1677 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,821,757 Number of Sequences: 3902068 Number of extensions: 3821757 Number of successful extensions: 83357 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80839 Number of HSP's gapped (non-prelim): 2464 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
