>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0090F16, complete sequence
          Length = 147341

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 496   gtgcagctggtgtccttcacctgcgggggcttcgccgtcgtgtggg 541
             ||||||||| ||  |||| ||||||| |||||| ||||||||||||
Sbjct: 93275 gtgcagctgctgcgcttcgcctgcggcggcttctccgtcgtgtggg 93320

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 496      gtgcagctggtgtccttcacctgcgggggcttcgccgtcgtgtggg 541
                ||||||||| ||  |||| ||||||| |||||| ||||||||||||
Sbjct: 24729213 gtgcagctgctgcgcttcgcctgcggcggcttctccgtcgtgtggg 24729168

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 496      gtgcagctggtgtccttcacctgcgggggcttcgccgtcgtgtggg 541
                ||||||||| ||  |||| ||||||| |||||| ||||||||||||
Sbjct: 25040883 gtgcagctgctgcgcttcgcctgcggcggcttctccgtcgtgtggg 25040838

>gb|AC118613.8| Mus musculus chromosome 6, clone RP23-442E2, complete sequence
          Length = 256556

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 132    ggtgaaagcctctgacccctccatc 156
              |||| ||||||||||||||||||||
Sbjct: 101850 ggtgcaagcctctgacccctccatc 101874

>ref|XM_963628.1| PREDICTED: Tribolium castaneum similar to CG3309-PA (LOC657153), mRNA
          Length = 1692

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 12   gctctctccctgatgatttga 32
            |||||||||||||||||||||
Sbjct: 1649 gctctctccctgatgatttga 1669

>gb|AC116350.2| Homo sapiens chromosome 5 clone RP11-357F12, complete sequence
          Length = 183009

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   actggggcctgtcggaggagt 448
             |||||||||||||||||||||
Sbjct: 94633 actggggcctgtcggaggagt 94653

>gb|AC022463.5| Homo sapiens BAC clone RP11-562N2 from 4, complete sequence
          Length = 190080

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 428   actggggcctgtcggaggagt 448
             |||||||||||||||||||||
Sbjct: 72448 actggggcctgtcggaggagt 72468

>gb|AC161147.6| Mus musculus BAC clone RP23-357G12 from chromosome 6, complete sequence
          Length = 225957

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 132   ggtgaaagcctctgacccctccatc 156
             |||| ||||||||||||||||||||
Sbjct: 46735 ggtgcaagcctctgacccctccatc 46711

>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete
              sequence
          Length = 150791

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     atgatttgagaccaaatagct 44
              |||||||||||||||||||||
Sbjct: 142434 atgatttgagaccaaatagct 142414

>ref|XM_493873.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1833

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  gagtgcaggcaatgggttgcccat 110
           |||||||||||||||| |||||||
Sbjct: 295 gagtgcaggcaatggggtgcccat 318

>emb|AL157409.16| Human DNA sequence from clone RP5-823D19 on chromosome 1q42.11-43
             Contains the 5' end of the SIPA1L2 gene for signal-induced
             proliferation-associated 1 like 2, complete sequence
          Length = 143798

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 496   gtgcagctggtgtccttcac 515
             ||||||||||||||||||||
Sbjct: 72775 gtgcagctggtgtccttcac 72756

>gb|AC008035.12| Homo sapiens 12 BAC RP11-446N19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 104000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   actggggcctgtcggaggag 447
             ||||||||||||||||||||
Sbjct: 43634 actggggcctgtcggaggag 43615

>gb|AC068993.14| Homo sapiens 12 BAC RP11-123M21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 186383

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   actggggcctgtcggaggag 447
             ||||||||||||||||||||
Sbjct: 12471 actggggcctgtcggaggag 12452

>gb|AC096950.2| Homo sapiens chromosome 1 clone RP4-612J11, complete sequence
          Length = 117864

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tctccctgatgatttgagac 35
             ||||||||||||||||||||
Sbjct: 17760 tctccctgatgatttgagac 17741

>gb|AF283321.1|AF283320S2 Homo sapiens low density lipoprotein receptor-related protein 5 (LRP5)
             gene, exons 10 through 23 and complete cds
          Length = 64475

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   agctgtggaccctggactgg 432
             ||||||||||||||||||||
Sbjct: 16456 agctgtggaccctggactgg 16437

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     gagtgcaggcaatgggttgcccat 110
              |||||||||||||||| |||||||
Sbjct: 125991 gagtgcaggcaatggggtgcccat 126014

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 516      ctgcgggggcttcgccgtcg 535
                ||||||||||||||||||||
Sbjct: 29082989 ctgcgggggcttcgccgtcg 29082970

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 470     cgtacgcggcggaggtgccg 489
               ||||||||||||||||||||
Sbjct: 8321213 cgtacgcggcggaggtgccg 8321194

>gb|S68356.1|S68356 Aplysia sp. action potential broadening potassium channel (Shab)
            mRNA, complete cds
          Length = 3060

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  gaggagtcgctcaagaggat 461
            ||||||||||||||||||||
Sbjct: 2500 gaggagtcgctcaagaggat 2519

>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0724B10
          Length = 169143

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 516    ctgcgggggcttcgccgtcg 535
              ||||||||||||||||||||
Sbjct: 129154 ctgcgggggcttcgccgtcg 129135

>dbj|AK101136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026H11, full
           insert sequence
          Length = 2750

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 87  gagtgcaggcaatgggttgcccat 110
           |||||||||||||||| |||||||
Sbjct: 887 gagtgcaggcaatggggtgcccat 910

>emb|AJ271735.1|HSA271735 Homo sapiens Xq pseudoautosomal region; segment 1/2
          Length = 240000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   actggggcctgtcggaggag 447
             ||||||||||||||||||||
Sbjct: 56611 actggggcctgtcggaggag 56592

>gb|AC084818.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668H12,
            complete sequence
          Length = 160603

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 87   gagtgcaggcaatgggttgcccat 110
            |||||||||||||||| |||||||
Sbjct: 8179 gagtgcaggcaatggggtgcccat 8202

>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
              complete sequence
          Length = 156772

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 87     gagtgcaggcaatgggttgcccat 110
              |||||||||||||||| |||||||
Sbjct: 125991 gagtgcaggcaatggggtgcccat 126014

>dbj|AP002366.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-142N13, complete
              sequence
          Length = 198720

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    agctgtggaccctggactgg 432
              ||||||||||||||||||||
Sbjct: 152937 agctgtggaccctggactgg 152918

>dbj|AP000807.4| Homo sapiens genomic DNA, chromosome 11, clone:RP11-715N9, complete
              sequence
          Length = 204439

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    agctgtggaccctggactgg 432
              ||||||||||||||||||||
Sbjct: 100006 agctgtggaccctggactgg 99987


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,527,821
Number of Sequences: 3902068
Number of extensions: 3527821
Number of successful extensions: 65247
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65049
Number of HSP's gapped (non-prelim): 198
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)