ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104135.1| Zea mays PCO081417 mRNA sequence Length = 1103 Score = 470 bits (237), Expect = e-129 Identities = 434/499 (86%), Gaps = 3/499 (0%) Strand = Plus / Plus Query: 91 ccgatctccggccatggccgcgcggcgccccggatcccctgcccccagatgcctgccccc 150 |||||||| ||| |||||||||||||||| ||||||||| ||| | || || |||| || Sbjct: 89 ccgatctcaggcgatggccgcgcggcgcctcggatcccccgcctctaggtggctgcggcc 148 Query: 151 ctccgcgctcctcctcctgg---ctgccgtcctcttcgcgtcctcgccgtcggcgcgcgc 207 |||||||| |||||||||| || | | ||| || || || || || |||| ||||| Sbjct: 149 gtccgcgctgctcctcctggtcgcttctgctctcctctcggccccgtcgccggcccgcgc 208 Query: 208 cctccggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcga 267 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 209 gctgcggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggttaa 268 Query: 268 ctccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctaccccgacgccca 327 | ||||||||||||| |||||| | ||||| |||||||||||| || ||||||||||| Sbjct: 269 cgccatggccgtcggaaagtaccacatcgtcagccccgaccccaactcacccgacgccca 328 Query: 328 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 387 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 329 gctccccgaatcgcaccgcatctccctcagggtgacgtcgccgtacgggaacagcatgca 388 Query: 388 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 447 |||| | ||||||||||||||||| ||||||||||||||||| | |||||||| ||||| Sbjct: 389 ctacgcggagaacgtgcagtcgggccacttcgccttcacggcggcggaggccggcgacta 448 Query: 448 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 507 |||||||||||||||||| || ||||||||||| || |||||| || ||||||||||| Sbjct: 449 cctggcctgcttctgggctcccgaccacaagccgccggtcaccatcgggttcgagttcga 508 Query: 508 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 567 ||||| |||||||||| | |||||||||| ||| |||||||||||||||||||||||| Sbjct: 509 ctggaggagcggcgtctccgccaaggactatcccagcgtcgccaagaagggcaaggtcga 568 Query: 568 tatgatggaactagagctg 586 |||||||||| | |||||| Sbjct: 569 tatgatggaattggagctg 587
>ref|XM_479238.1| Oryza sativa (japonica cultivar-group), mRNA Length = 971 Score = 442 bits (223), Expect = e-121 Identities = 340/379 (89%) Strand = Plus / Plus Query: 198 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 242 Query: 258 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 317 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 243 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 302 Query: 318 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 377 ||||| || |||||||| || |||||| ||||||||||||||||||| |||||||||| Sbjct: 303 ccgacaaccctctccccgactcccaccgcatctccctcagggtgacgtcaccgtacggga 362 Query: 378 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 437 ||||| |||||||| | |||||||||| ||||||| ||||||| |||||||| |||| Sbjct: 363 acagcgtgcactacgcggagaacgtgccgtcggggaacttcgcgttcacggcgacggagg 422 Query: 438 ccggggactacctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcacct 497 |||| |||||||||||||||||||||||||| ||||||||||| || ||| || || | Sbjct: 423 ccggcgactacctggcctgcttctgggcgcccgaccacaagccgccggtctccatcgggt 482 Query: 498 tcgagttcgactggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagg 557 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 483 tcgagttcgactggaggagcggcgtcgcggccaaggactggtccaacgtcgccaagaagg 542 Query: 558 gcaaggtcgatatgatgga 576 | |||||||| ||||||| Sbjct: 543 ggcaggtcgatgtgatgga 561 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 89 ctccgatctccggccatggccgcgcggcgccccggatc 126 |||||||||||||||||||||||||| ||||||||||| Sbjct: 68 ctccgatctccggccatggccgcgcgccgccccggatc 105
>dbj|AK060066.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H05, full insert sequence Length = 971 Score = 442 bits (223), Expect = e-121 Identities = 340/379 (89%) Strand = Plus / Plus Query: 198 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 242 Query: 258 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 317 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 243 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 302 Query: 318 ccgacgcccagctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacggga 377 ||||| || |||||||| || |||||| ||||||||||||||||||| |||||||||| Sbjct: 303 ccgacaaccctctccccgactcccaccgcatctccctcagggtgacgtcaccgtacggga 362 Query: 378 acagcatgcactactccgagaacgtgcagtcggggcacttcgccttcacggctgttgagg 437 ||||| |||||||| | |||||||||| ||||||| ||||||| |||||||| |||| Sbjct: 363 acagcgtgcactacgcggagaacgtgccgtcggggaacttcgcgttcacggcgacggagg 422 Query: 438 ccggggactacctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcacct 497 |||| |||||||||||||||||||||||||| ||||||||||| || ||| || || | Sbjct: 423 ccggcgactacctggcctgcttctgggcgcccgaccacaagccgccggtctccatcgggt 482 Query: 498 tcgagttcgactggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagg 557 ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 483 tcgagttcgactggaggagcggcgtcgcggccaaggactggtccaacgtcgccaagaagg 542 Query: 558 gcaaggtcgatatgatgga 576 | |||||||| ||||||| Sbjct: 543 ggcaggtcgatgtgatgga 561 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 89 ctccgatctccggccatggccgcgcggcgccccggatc 126 |||||||||||||||||||||||||| ||||||||||| Sbjct: 68 ctccgatctccggccatggccgcgcgccgccccggatc 105
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 228 bits (115), Expect = 2e-56 Identities = 187/211 (88%) Strand = Plus / Plus Query: 358 ggtgacgtcgccgtacgggaacagcatgcactactccgagaacgtgcagtcggggcactt 417 ||||||||| ||||||||||||||| |||||||| | |||||||||| ||||||| |||| Sbjct: 26189426 ggtgacgtcaccgtacgggaacagcgtgcactacgcggagaacgtgccgtcggggaactt 26189485 Query: 418 cgccttcacggctgttgaggccggggactacctggcctgcttctgggcgcctgaccacaa 477 ||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 26189486 cgcgttcacggcgacggaggccggcgactacctggcctgcttctgggcgcccgaccacaa 26189545 Query: 478 gccacccgtcaccgtcaccttcgagttcgactggaagagcggcgtcacggccaaggactg 537 ||| || ||| || || |||||||||||||||| |||||||||| ||||||||||||| Sbjct: 26189546 gccgccggtctccatcgggttcgagttcgactggaggagcggcgtcgcggccaaggactg 26189605 Query: 538 gtccaacgtcgccaagaagggcaaggtcgat 568 ||||||||||||||||||||| |||||||| Sbjct: 26189606 gtccaacgtcgccaagaaggggcaggtcgat 26189636 Score = 212 bits (107), Expect = 1e-51 Identities = 149/163 (91%) Strand = Plus / Plus Query: 198 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26189134 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 26189193 Query: 258 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 317 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 26189194 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 26189253 Query: 318 ccgacgcccagctccccgattcgcaccgcgtctccctcagggt 360 ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 26189254 ccgacaaccctctccccgactcccaccgcatctccctcagggt 26189296 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 89 ctccgatctccggccatggccgcgcggcgccccggatc 126 |||||||||||||||||||||||||| ||||||||||| Sbjct: 26189019 ctccgatctccggccatggccgcgcgccgccccggatc 26189056
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 228 bits (115), Expect = 2e-56 Identities = 187/211 (88%) Strand = Plus / Plus Query: 358 ggtgacgtcgccgtacgggaacagcatgcactactccgagaacgtgcagtcggggcactt 417 ||||||||| ||||||||||||||| |||||||| | |||||||||| ||||||| |||| Sbjct: 81284 ggtgacgtcaccgtacgggaacagcgtgcactacgcggagaacgtgccgtcggggaactt 81343 Query: 418 cgccttcacggctgttgaggccggggactacctggcctgcttctgggcgcctgaccacaa 477 ||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 81344 cgcgttcacggcgacggaggccggcgactacctggcctgcttctgggcgcccgaccacaa 81403 Query: 478 gccacccgtcaccgtcaccttcgagttcgactggaagagcggcgtcacggccaaggactg 537 ||| || ||| || || |||||||||||||||| |||||||||| ||||||||||||| Sbjct: 81404 gccgccggtctccatcgggttcgagttcgactggaggagcggcgtcgcggccaaggactg 81463 Query: 538 gtccaacgtcgccaagaagggcaaggtcgat 568 ||||||||||||||||||||| |||||||| Sbjct: 81464 gtccaacgtcgccaagaaggggcaggtcgat 81494 Score = 212 bits (107), Expect = 1e-51 Identities = 149/163 (91%) Strand = Plus / Plus Query: 198 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80992 cggcgcgcgccctccggttcgacctcgagtccggccacaccaagtgcatctccgacgaga 81051 Query: 258 tcaaggtcgactccatggccgtcggcaagtacagcgtcgtcggccccgaccccagctacc 317 |||||||| ||||||||| |||||| |||||| |||||||||||||||||||| || || Sbjct: 81052 tcaaggtcaactccatggtcgtcgggaagtaccacgtcgtcggccccgaccccaacttcc 81111 Query: 318 ccgacgcccagctccccgattcgcaccgcgtctccctcagggt 360 ||||| || |||||||| || |||||| ||||||||||||| Sbjct: 81112 ccgacaaccctctccccgactcccaccgcatctccctcagggt 81154 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 89 ctccgatctccggccatggccgcgcggcgccccggatc 126 |||||||||||||||||||||||||| ||||||||||| Sbjct: 80877 ctccgatctccggccatggccgcgcgccgccccggatc 80914
>ref|XM_470711.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 200 bits (101), Expect = 4e-48 Identities = 212/249 (85%) Strand = Plus / Plus Query: 328 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 387 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 237 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 296 Query: 388 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 447 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 297 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 356 Query: 448 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 507 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 357 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 416 Query: 508 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 567 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 417 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 476 Query: 568 tatgatgga 576 ||||||||| Sbjct: 477 tatgatgga 485 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 212 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 271 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 88 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 147 Query: 272 atggccgtcggcaagtac 289 ||||| || ||||||||| Sbjct: 148 atggcggtgggcaagtac 165
>dbj|AK059565.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-H07, full insert sequence Length = 1061 Score = 192 bits (97), Expect = 9e-46 Identities = 211/249 (84%) Strand = Plus / Plus Query: 328 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 387 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 388 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccttacggcaacagcctgca 447 Query: 388 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 447 |||||| ||||||||||||||||| |||||||||||||| | |||||||||||||| Sbjct: 448 ctactcggagaacgtgcagtcgggcaacttcgccttcacgacgtccgaggccggggacta 507 Query: 448 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 507 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 508 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 567 Query: 508 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 567 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 568 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 627 Query: 568 tatgatgga 576 ||||||||| Sbjct: 628 tatgatgga 636 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 212 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 271 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 239 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 298 Query: 272 atggccgtcggcaagtac 289 ||||| || ||||||||| Sbjct: 299 atggcggtgggcaagtac 316
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 184 bits (93), Expect = 2e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 328 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 387 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 14685142 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 14685083 Query: 388 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 447 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 14685082 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 14685023 Query: 448 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 507 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 14685022 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 14684963 Query: 508 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 567 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 14684962 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 14684903 Query: 568 t 568 | Sbjct: 14684902 t 14684902 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 212 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 271 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 14685291 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 14685232 Query: 272 atggccgtcggcaagtac 289 ||||| || ||||||||| Sbjct: 14685231 atggcggtgggcaagtac 14685214 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ccccctccgcgctcctcctc 166 |||||||||||||||||||| Sbjct: 14593090 ccccctccgcgctcctcctc 14593071 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccatcccatccc 31 |||||||||||||||||| |||| |||| Sbjct: 12920316 cctctcccctcctcccccttcccctccc 12920343
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 184 bits (93), Expect = 2e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 328 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 387 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 24054 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 23995 Query: 388 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 447 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 23994 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 23935 Query: 448 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 507 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 23934 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 23875 Query: 508 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 567 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 23874 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 23815 Query: 568 t 568 | Sbjct: 23814 t 23814 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 212 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 271 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 24203 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 24144 Query: 272 atggccgtcggcaagtac 289 ||||| || ||||||||| Sbjct: 24143 atggcggtgggcaagtac 24126
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 184 bits (93), Expect = 2e-43 Identities = 204/241 (84%) Strand = Plus / Minus Query: 328 gctccccgattcgcaccgcgtctccctcagggtgacgtcgccgtacgggaacagcatgca 387 |||||| || || ||||||||||| | |||| ||||| || ||||| |||||| |||| Sbjct: 14680076 gctcccggagtcccaccgcgtctcattgcgggtcacgtcaccctacggcaacagcctgca 14680017 Query: 388 ctactccgagaacgtgcagtcggggcacttcgccttcacggctgttgaggccggggacta 447 |||||| ||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 14680016 ctactcggagaacgtgcagtcgggcaacttcgccttcacggcgtccgaggccggggacta 14679957 Query: 448 cctggcctgcttctgggcgcctgaccacaagccacccgtcaccgtcaccttcgagttcga 507 ||| ||||||||||||||||| |||||| || ||| ||||||| |||||||||||| Sbjct: 14679956 cctcgcctgcttctgggcgcccgaccaccgccccaccgccaccgtcggcttcgagttcga 14679897 Query: 508 ctggaagagcggcgtcacggccaaggactggtccaacgtcgccaagaagggcaaggtcga 567 |||| ||||||||| | |||| ||||||| |||||||||||||||||||| ||||||| Sbjct: 14679896 ctggcgcagcggcgtctccgccagggactggaccaacgtcgccaagaagggccaggtcga 14679837 Query: 568 t 568 | Sbjct: 14679836 t 14679836 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 212 cggttcgacctcgagtccggccacaccaagtgcatctccgacgagatcaaggtcgactcc 271 ||||||||||| |||| |||||||||||||||||||||||||| |||||||| | | || Sbjct: 14680225 cggttcgacctgcagtcgggccacaccaagtgcatctccgacgacatcaaggtgggcgcc 14680166 Query: 272 atggccgtcggcaagtac 289 ||||| || ||||||||| Sbjct: 14680165 atggcggtgggcaagtac 14680148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 ccccctccgcgctcctcctc 166 |||||||||||||||||||| Sbjct: 14588065 ccccctccgcgctcctcctc 14588046 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccatcccatccc 31 |||||||||||||||||| |||| |||| Sbjct: 12917079 cctctcccctcctcccccttcccctccc 12917106
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 92 cgatctccggccatggccgcgcggcgccccggatcccctgcccccagatg 141 ||||||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 5969589 cgatctccggccatggccgcgcgccgccccggatctcccgctcccagatg 5969638 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gcgtcgtcggccccgacccc 310 |||||||||||||||||||| Sbjct: 5426634 gcgtcgtcggccccgacccc 5426615
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 92 cgatctccggccatggccgcgcggcgccccggatcccctgcccccagatg 141 ||||||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 156699 cgatctccggccatggccgcgcgccgccccggatctcccgctcccagatg 156748
>dbj|AP003858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_H11 Length = 122464 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 92 cgatctccggccatggccgcgcggcgccccggatcccctgcccccagatg 141 ||||||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 20401 cgatctccggccatggccgcgcgccgccccggatctcccgctcccagatg 20450
>dbj|AP004157.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1114_D06 Length = 107621 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 92 cgatctccggccatggccgcgcggcgccccggatcccctgcccccagatg 141 ||||||||||||||||||||||| ||||||||||| || || |||||||| Sbjct: 62692 cgatctccggccatggccgcgcgccgccccggatctcccgctcccagatg 62741
>dbj|AK047800.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030045P07 product:katanin p80 (WD40-containing) subunit B 1, full insert sequence Length = 2104 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 aagcctctcccctcctcccccatcccatcc 30 |||||||||||||||||||||| ||||||| Sbjct: 925 aagcctctcccctcctcccccaccccatcc 954
>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence Length = 205702 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 aagcctctcccctcctcccccatcccatcc 30 |||||||||||||||||||||| ||||||| Sbjct: 132372 aagcctctcccctcctcccccaccccatcc 132401
>emb|AL844544.9| Mouse DNA sequence from clone RP23-230B1 on chromosome 2, complete sequence Length = 156426 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 8 tcccctcctcccccatcccatcc 30 ||||||||||||||||||||||| Sbjct: 101677 tcccctcctcccccatcccatcc 101699
>gb|AC160114.2| Mus musculus BAC clone RP24-70J8 from chromosome 13, complete sequence Length = 237699 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 gcctctcccctcctcccccatc 24 |||||||||||||||||||||| Sbjct: 55446 gcctctcccctcctcccccatc 55425
>gb|CP000150.1| Burkholderia sp. 383 chromosome 3, complete sequence Length = 1395069 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 cgtcgccgtacgggaacagca 383 ||||||||||||||||||||| Sbjct: 681301 cgtcgccgtacgggaacagca 681321
>gb|AY017844.1| Oryza sativa microsatellite MRG0169 containing (AG)X13, closest to marker RM121, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cctcctcccccatcccatccc 31 ||||||||||||||||||||| Sbjct: 22 cctcctcccccatcccatccc 2
>emb|AL513365.27| Human DNA sequence from clone RP3-476K8 on chromosome 1 Contains the LIN28 gene for lin-28 homolog (C. elegans), the DHDDS gene for dehydrodolichyl diphosphate synthase, a ribosomal protein L17 (RPL17) pseudogene, a novel gene, the HMGN2 gene for high-mobility group nucleosomal binding domain 2 and two CpG islands, complete sequence Length = 107415 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 agcctctcccctcctcccccatccc 26 |||||||||||| |||||||||||| Sbjct: 104258 agcctctcccctgctcccccatccc 104234
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 546 tcgccaagaagggcaaggtcgatat 570 |||||||||||| |||||||||||| Sbjct: 3959 tcgccaagaaggccaaggtcgatat 3983
>gb|AC153163.2| Ornithorhynchus anatinus BAC clone OABb-434A1 from chromosome unknown, complete sequence Length = 156066 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccatcccatccca 32 ||||||||| || |||||||||||||||| Sbjct: 27894 cctctcccccccccccccatcccatccca 27922
>dbj|AK143535.1| Mus musculus 12 days embryo whole body cDNA, RIKEN full-length enriched library, clone:E970016H17 product:solute carrier family 12, member 7, full insert sequence Length = 3788 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 cgccgtcggcgcgcgccctcc 212 ||||||||||||||||||||| Sbjct: 113 cgccgtcggcgcgcgccctcc 93
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 cctcgccgtcggcgcgcgccc 209 ||||||||||||||||||||| Sbjct: 3154177 cctcgccgtcggcgcgcgccc 3154157
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cctcctcccccatcccatccc 31 ||||||||||||||||||||| Sbjct: 7672594 cctcctcccccatcccatccc 7672614
>gb|AC034099.16| Mus Musculus Strain C57BL6/J Chromosome 7 BAC, RP23-145I16, complete sequence Length = 229553 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccatcccatccca 32 |||||||||||| | |||||||||||||| Sbjct: 151712 cctctcccctcccctcccatcccatccca 151684
>dbj|AP004027.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_C11 Length = 124827 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cctcctcccccatcccatccc 31 ||||||||||||||||||||| Sbjct: 95849 cctcctcccccatcccatccc 95869
>dbj|AK102187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086P03, full insert sequence Length = 3307 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cctcctcccccatcccatccc 31 ||||||||||||||||||||| Sbjct: 44 cctcctcccccatcccatccc 64
>dbj|AP000923.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-752D5, complete sequences Length = 170973 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cctcctcccccatcccatccc 31 ||||||||||||||||||||| Sbjct: 69812 cctcctcccccatcccatccc 69832
>emb|AL731864.25| Mouse DNA sequence from clone RP23-342F20 on chromosome 7, complete sequence Length = 148047 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccatcccatccca 32 |||||||||||| | |||||||||||||| Sbjct: 79588 cctctcccctcccctcccatcccatccca 79616
>ref|XM_550427.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1423 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctcgccgtcggcgcgcgcc 208 |||||||||||||||||||| Sbjct: 110 cctcgccgtcggcgcgcgcc 129
>gb|AC166163.3| Mus musculus BAC clone RP23-444G9 from chromosome 17, complete sequence Length = 171447 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tcccctcctcccccatcccatccc 31 |||||||| ||||||||||||||| Sbjct: 114247 tcccctccacccccatcccatccc 114270
>ref|XM_480493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1632 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gcgtcgtcggccccgacccc 310 |||||||||||||||||||| Sbjct: 1208 gcgtcgtcggccccgacccc 1227
>ref|NM_197537.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0060I05.1), mRNA Length = 950 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 75 cctctcccctcctcccccat 56
>ref|XM_472020.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2535 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgtcctcgccgtcggcgcgcgc 207 |||| ||||||||||||||||||| Sbjct: 326 cgcggcctcgccgtcggcgcgcgc 349
>gb|AC149778.2| Bos taurus BAC CH240-9E7 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 138869 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccatcccatccc 31 ||||| |||||||| ||||||||||||| Sbjct: 120844 cctcttccctcctcacccatcccatccc 120817
>ref|XM_582694.2| PREDICTED: Bos taurus similar to ring finger protein 149 (LOC506267), partial mRNA Length = 4148 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cgtcggcgcgcgccctccgg 214 |||||||||||||||||||| Sbjct: 317 cgtcggcgcgcgccctccgg 336
>gb|AC125255.15| Mus musculus chromosome 5, clone RP24-332C17, complete sequence Length = 173258 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccatcccatccc 31 |||||||||||||||||| |||| |||| Sbjct: 81196 cctctcccctcctcccccctcccctccc 81169
>gb|BC028048.1| Homo sapiens leukocyte receptor cluster (LRC) member 8, mRNA (cDNA clone MGC:40108 IMAGE:3907442), complete cds Length = 3720 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 2780 tcccctcctccccaatcccatccc 2757
>gb|AC132288.5| Mus musculus BAC clone RP24-315D13 from chromosome 19, complete sequence Length = 177655 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cccctcctcccccatcccatccca 32 |||||||||||||| ||||||||| Sbjct: 50212 cccctcctcccccaccccatccca 50189
>ref|NM_052925.1| Homo sapiens leukocyte receptor cluster (LRC) member 8 (LENG8), mRNA Length = 3720 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 2780 tcccctcctccccaatcccatccc 2757
>ref|XM_542770.2| PREDICTED: Canis familiaris similar to DNA-binding protein SATB1 (Special AT-rich sequence binding protein 1) (LOC485650), mRNA Length = 2554 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 ctctcccctcctcccccatc 24 |||||||||||||||||||| Sbjct: 80 ctctcccctcctcccccatc 99
>emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chromosome 9, complete sequence Length = 196093 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ctctcccctcctcccccatcccat 28 |||||||||||||||||| ||||| Sbjct: 23796 ctctcccctcctcccccaccccat 23773
>gb|AC109612.22| Mus musculus strain C57BL/6J clone rp23-37i3 map 17, complete sequence Length = 179382 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 cccctcctcccccatcccatcccagtca 36 |||||||| |||||||||||| |||||| Sbjct: 137099 cccctccttccccatcccatcacagtca 137072
>emb|AL928970.15| Human DNA sequence from clone XXyac-2039 on chromosome 9 Contains a pseudogene similar to part of DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11(CHL1-like helicase homolog, S. cerevisiae) (CHL1, KRG2, CHLR1, MGC9335) (DDX11), a novel pseudogene, a novel gene and two CpG islands, complete sequence Length = 23993 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7915 ccatcccatcccagtcagcc 7934
>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a pseudogene similar to part of DEAD/H box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two novel pseudogenes, nine novel genes, two novel proteins similar to the olfactory receptor family, a capicua homolog (Drosophila) (CIC) pseudogene and two CpG islands, complete sequence Length = 166904 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7289 ccatcccatcccagtcagcc 7308
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 ccccctccgcgctcctcctc 166 |||||||||||||||||||| Sbjct: 64621 ccccctccgcgctcctcctc 64640
>emb|X74462.1|HPV3 Human papillomavirus type 3 genomic DNA Length = 7820 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 cgctcctcctcctggctgcc 175 |||||||||||||||||||| Sbjct: 1350 cgctcctcctcctggctgcc 1331
>emb|AL731624.3|OSJN00266 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C07, complete sequence Length = 138383 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgtcctcgccgtcggcgcgcgc 207 |||| ||||||||||||||||||| Sbjct: 15617 cgcggcctcgccgtcggcgcgcgc 15640
>emb|AL834532.1|HSM805657 Homo sapiens mRNA; cDNA DKFZp434N0612 (from clone DKFZp434N0612) Length = 1415 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 531 tcccctcctccccaatcccatccc 508
>emb|CR759947.5| Gorilla DNA sequence from clone CH255-315F17, complete sequence Length = 97153 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 31508 tcccctcctccccaatcccatccc 31485
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 35143 cctctcccctcctcccccat 35162
>emb|AL833879.1|HSM805174 Homo sapiens mRNA; cDNA DKFZp434H1015 (from clone DKFZp434H1015) Length = 5242 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 4423 tcccctcctccccaatcccatccc 4400
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0094H06, from chromosome 3, complete sequence Length = 118075 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccatcccatccc 31 |||||||||||||||||| |||| |||| Sbjct: 19193 cctctcccctcctcccccttcccctccc 19166
>emb|CR624593.1| full-length cDNA clone CS0DC015YO05 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1653 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 793 tcccctcctccccaatcccatccc 770
>gb|AC107065.5| Bos taurus clone rp42-513g13, complete sequence Length = 175949 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccatcccatccc 31 |||| |||||||| |||||||||||||| Sbjct: 120030 cctcccccctcctaccccatcccatccc 120057
>ref|XM_931024.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 45 (FLJ00038), mRNA Length = 9126 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_931018.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 44 (FLJ00038), mRNA Length = 9365 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_931012.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 43 (FLJ00038), mRNA Length = 10198 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930989.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 40 (FLJ00038), mRNA Length = 9646 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930941.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 34 (FLJ00038), mRNA Length = 10776 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930913.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 31 (FLJ00038), mRNA Length = 10957 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930901.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 29 (FLJ00038), mRNA Length = 11093 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930896.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 28 (FLJ00038), mRNA Length = 10405 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930858.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 24 (FLJ00038), mRNA Length = 10467 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 6787 ccatcccatcccagtcagcc 6768
>ref|XM_930847.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 23 (FLJ00038), mRNA Length = 10553 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 6873 ccatcccatcccagtcagcc 6854
>ref|XM_930839.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 22 (FLJ00038), mRNA Length = 10338 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930782.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 17 (FLJ00038), mRNA Length = 10147 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930773.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 16 (FLJ00038), mRNA Length = 10238 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 7277 ccatcccatcccagtcagcc 7258
>ref|XM_930763.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 15 (FLJ00038), mRNA Length = 9383 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 5703 ccatcccatcccagtcagcc 5684
>ref|XM_930700.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 9 (FLJ00038), mRNA Length = 3533 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 409 ccatcccatcccagtcagcc 390
>ref|XM_930674.1| PREDICTED: Homo sapiens CXYorf1-related protein, transcript variant 7 (FLJ00038), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 409 ccatcccatcccagtcagcc 390
>gb|AF318338.1|AF318338 Homo sapiens pp13842 mRNA, complete cds Length = 1259 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 323 tcccctcctccccaatcccatccc 300
>gb|AC182428.2| Pan troglodytes BAC clone CH251-637G21 from chromosome 4, complete sequence Length = 210098 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 ctcccctcctcccccatccc 26 |||||||||||||||||||| Sbjct: 196935 ctcccctcctcccccatccc 196916
>gb|AF119117.1| Homo sapiens dopamine transporter (SLC6A3) gene, complete cds Length = 59747 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 5 ctctcccctcctcccccatcccatccca 32 ||||||||||| | |||||||||||||| Sbjct: 49231 ctctcccctcccctcccatcccatccca 49204
>gb|AC140725.3| Homo sapiens chromosome 15, clone, complete sequence Length = 181240 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 8030 ccatcccatcccagtcagcc 8049
>gb|AC090657.40| Mus musculus strain C57BL/6J clone rp23-410i12 map 18, complete sequence Length = 186929 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 cccctcctcccccatcccatccca 32 |||||||||||||| ||||||||| Sbjct: 24602 cccctcctcccccaccccatccca 24579
>gb|AC157773.6| Mus musculus chromosome 8, clone RP24-161L20, complete sequence Length = 179186 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccatcccatccc 31 |||||||||||||||||| |||| |||| Sbjct: 79214 cctctcccctcctcccccctcccctccc 79187
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 184 cgcgtcctcgccgtcggcgcgcgc 207 |||| ||||||||||||||||||| Sbjct: 16765186 cgcggcctcgccgtcggcgcgcgc 16765209
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 20319641 cctctcccctcctcccccat 20319660
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 5802541 cctctcccctcctcccccat 5802560 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctcgccgtcggcgcgcgcc 208 |||||||||||||||||||| Sbjct: 4443778 cctcgccgtcggcgcgcgcc 4443797
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome Length = 131995 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 ggccgtcggcaagtacagcg 293 |||||||||||||||||||| Sbjct: 40176 ggccgtcggcaagtacagcg 40157
>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0489A01 Length = 137174 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctcgccgtcggcgcgcgcc 208 |||||||||||||||||||| Sbjct: 103860 cctcgccgtcggcgcgcgcc 103879
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cgtcctcgccgtcggcgcgc 205 |||||||||||||||||||| Sbjct: 7923869 cgtcctcgccgtcggcgcgc 7923888
>gb|AC008746.10| Homo sapiens chromosome 19 clone CTD-2587H19, complete sequence Length = 200070 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 135843 tcccctcctccccaatcccatccc 135820
>gb|AF211975.1|AF211975 Homo sapiens LENG8 mRNA, variant C, partial sequence Length = 2060 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tcccctcctcccccatcccatccc 31 ||||||||||||| |||||||||| Sbjct: 1143 tcccctcctccccaatcccatccc 1120
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 gcgtcgtcggccccgacccc 310 |||||||||||||||||||| Sbjct: 96445 gcgtcgtcggccccgacccc 96426
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 6282 cctctcccctcctcccccat 6301
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 127243 cctctcccctcctcccccat 127262
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cgccgtcggcgcgcgccctc 211 |||||||||||||||||||| Sbjct: 5488591 cgccgtcggcgcgcgccctc 5488572 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 cgatctccggccatggccgcgcgg 115 ||||||||||||||| |||||||| Sbjct: 3751469 cgatctccggccatgcccgcgcgg 3751492
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cgcgtcctcgccgtcggcgcgcgc 207 ||||||| |||||||||||||||| Sbjct: 1718632 cgcgtccacgccgtcggcgcgcgc 1718609
>gb|BC063470.1| Homo sapiens CXYorf1-related protein, mRNA (cDNA clone IMAGE:5211206) Length = 1642 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 440 ccatcccatcccagtcagcc 421
>dbj|AK024481.1| Homo sapiens mRNA for FLJ00075 protein, partial cds Length = 4236 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 932 ccatcccatcccagtcagcc 913
>dbj|AK109098.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-A11, full insert sequence Length = 967 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 97 cctctcccctcctcccccat 78
>dbj|AK100604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107F13, full insert sequence Length = 1423 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctcgccgtcggcgcgcgcc 208 |||||||||||||||||||| Sbjct: 110 cctcgccgtcggcgcgcgcc 129
>dbj|AK071130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078C01, full insert sequence Length = 1711 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cctcgccgtcggcgcgcgcc 208 |||||||||||||||||||| Sbjct: 30 cctcgccgtcggcgcgcgcc 49
>gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, complete sequence Length = 188634 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 cctctcccctcctcccccatcccatccc 31 |||||||||||||||||| |||| |||| Sbjct: 161810 cctctcccctcctcccccctcccctccc 161783
>gb|AC115761.12| Mus musculus chromosome 7, clone RP23-62N10, complete sequence Length = 215013 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 157 gctcctcctcctggctgccg 176 |||||||||||||||||||| Sbjct: 123352 gctcctcctcctggctgccg 123333
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 agtccggccacaccaagtgc 244 |||||||||||||||||||| Sbjct: 712899 agtccggccacaccaagtgc 712918
>dbj|AP006221.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-190A2, telomere region, complete sequence Length = 36731 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 ccatcccatcccagtcagcc 39 |||||||||||||||||||| Sbjct: 29085 ccatcccatcccagtcagcc 29066
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 cctctcccctcctcccccat 23 |||||||||||||||||||| Sbjct: 20330913 cctctcccctcctcccccat 20330932
>gb|AC172863.1| Brassica rapa subsp. pekinensis clone KBrB070M24, complete sequence Length = 97697 Score = 40.1 bits (20), Expect = 8.0 Identities = 56/68 (82%) Strand = Plus / Minus Query: 230 ggccacaccaagtgcatctccgacgagatcaaggtcgactccatggccgtcggcaagtac 289 |||||||| || ||||||||||| ||||| | | | || | ||| |||||||||||||| Sbjct: 50417 ggccacacgaaatgcatctccgaggagattcacgccaacgcaatgtccgtcggcaagtac 50358 Query: 290 agcgtcgt 297 ||| |||| Sbjct: 50357 agcatcgt 50350 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,153,566 Number of Sequences: 3902068 Number of extensions: 4153566 Number of successful extensions: 99006 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 97431 Number of HSP's gapped (non-prelim): 1557 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
