ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart22a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1JI60_HORVU (Q00531) 60 kDa jasmonate-induced protein (EC 3.2.2.2... 171 1e-42
2PBLFB_EUGGR (P84741) Photoactivated adenylate cyclase beta-subun... 32 1.4
3VPS54_RAT (Q9JMK8) Vacuolar protein sorting protein 54 (Vps54-li... 32 1.8
4PCYAB_EUGGR (Q8S9F1) Photoactivated adenylate cyclase subunit be... 31 3.0
5GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4) (Endo... 31 3.0
6PCYAB_ASTLO (Q76L33) Photoactivated adenylate cyclase subunit be... 30 6.7

>JI60_HORVU (Q00531) 60 kDa jasmonate-induced protein (EC 3.2.2.22) (rRNA|
           N-glycosidase)
          Length = 560

 Score =  171 bits (434), Expect = 1e-42
 Identities = 97/176 (55%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = +2

Query: 71  KSDMAAATGYGDAPTDEQLLAYAELPRQGRYMAEVFAVRIPATAGADPPSGTISFHGGHC 250
           +S+MAAA       TDEQLLAYA+LP+ GRYMAEVFAVRIPATAG D P+          
Sbjct: 282 RSNMAAAP-----TTDEQLLAYAQLPKHGRYMAEVFAVRIPATAGGDRPAAPSLCTAATA 336

Query: 251 SSDFIYSPEEEHASQQTSCDSQGNIVLTGPSVATSAYSPIVFSLDLHDGEA----DXXXX 418
           ++    + ++     + +  ++      G  +ATSAY PIVF+LDLHDG      +    
Sbjct: 337 AATSFTARKKNTPRSKPAATARVTWSSLGHRLATSAYGPIVFNLDLHDGNCGQADEEEDE 396

Query: 419 XNTARIVCDTIGGDFSNYNRAISETVRTGYGPAEVIYAVLSNGIQGRVDVKLSRLQ 586
            NT RIVCD IGGDFSNYN+AISETV T  GPAEVIYAVLSNG+QGRVDVKL+ LQ
Sbjct: 397 KNTGRIVCDAIGGDFSNYNKAISETVLTRCGPAEVIYAVLSNGVQGRVDVKLAGLQ 452



to top

>PBLFB_EUGGR (P84741) Photoactivated adenylate cyclase beta-subunit-like protein|
           FB
          Length = 859

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 520 LRGAIACAYSLRYGPVVVREVAANGVADYPRXXXXXXXXXFSVMEVEA 377
           +RG ++C   L YG VV+ +  + G+ +Y             VMEVEA
Sbjct: 706 VRGCVSCGVGLEYGQVVMAQCGSMGLTEY----VVAGAVSARVMEVEA 749



to top

>VPS54_RAT (Q9JMK8) Vacuolar protein sorting protein 54 (Vps54-like protein)|
          Length = 965

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 137 AELPRQGRYMAEVFAVRIPATAGADPPSG-TISFHGGHCSSDFIYSPEEEHASQQTSCDS 313
           A L  +G ++++ F+   PA+A  D  S    S H   CSSD +  PE    S  +   +
Sbjct: 497 AYLTHEGLFISDAFSEAEPASAAVDTTSQRNTSPHSEPCSSDSVSEPECTTDSSSSKEQT 556

Query: 314 QGNIVLTGPSVATS 355
             +  L G  +  S
Sbjct: 557 PASATLGGVDIIVS 570



to top

>PCYAB_EUGGR (Q8S9F1) Photoactivated adenylate cyclase subunit beta (EC 4.6.1.1)|
           (Photoactivated adenylyl cyclase beta subunit)
          Length = 859

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 520 LRGAIACAYSLRYGPVVVREVAANGVADYPRXXXXXXXXXFSVMEVEA 377
           +RG ++C   L YG VV+ +  + G+ +Y             VMEVEA
Sbjct: 706 VRGCVSCGVGLDYGQVVMAQCGSLGLTEY----VVAGAVSARVMEVEA 749



to top

>GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase C) (Cellulase C)
          Length = 1101

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 86  AATGYGDAPTDEQLLAYAELPRQGRYMAEVF--AVRIPATAGADPPSGTISFHGGHCSSD 259
           A  G   AP    L     L  + R + E F  +   PAT  AD P G I+F  G  S+D
Sbjct: 108 ALVGQNGAPYGTVLDTSPALTSEPRQVTETFTASATYPATPAADDPEGQIAFQLGGFSAD 167



to top

>PCYAB_ASTLO (Q76L33) Photoactivated adenylate cyclase subunit beta (EC 4.6.1.1)|
           (Photoactivated adenylyl cyclase beta subunit)
          Length = 860

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -2

Query: 520 LRGAIACAYSLRYGPVVVREVAANGVADYPRXXXXXXXXXFSVMEVEA 377
           +RG ++C   L YG VV+ +  + G+ +Y             VMEVE+
Sbjct: 706 VRGCVSCGVGLDYGQVVMAQCGSLGLTEY----VVAGAVSARVMEVES 749


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,676,785
Number of Sequences: 219361
Number of extensions: 1232957
Number of successful extensions: 3670
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3667
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5101629520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top