Clone Name | bart22a07 |
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Clone Library Name | barley_pub |
>JI60_HORVU (Q00531) 60 kDa jasmonate-induced protein (EC 3.2.2.22) (rRNA| N-glycosidase) Length = 560 Score = 171 bits (434), Expect = 1e-42 Identities = 97/176 (55%), Positives = 117/176 (66%), Gaps = 4/176 (2%) Frame = +2 Query: 71 KSDMAAATGYGDAPTDEQLLAYAELPRQGRYMAEVFAVRIPATAGADPPSGTISFHGGHC 250 +S+MAAA TDEQLLAYA+LP+ GRYMAEVFAVRIPATAG D P+ Sbjct: 282 RSNMAAAP-----TTDEQLLAYAQLPKHGRYMAEVFAVRIPATAGGDRPAAPSLCTAATA 336 Query: 251 SSDFIYSPEEEHASQQTSCDSQGNIVLTGPSVATSAYSPIVFSLDLHDGEA----DXXXX 418 ++ + ++ + + ++ G +ATSAY PIVF+LDLHDG + Sbjct: 337 AATSFTARKKNTPRSKPAATARVTWSSLGHRLATSAYGPIVFNLDLHDGNCGQADEEEDE 396 Query: 419 XNTARIVCDTIGGDFSNYNRAISETVRTGYGPAEVIYAVLSNGIQGRVDVKLSRLQ 586 NT RIVCD IGGDFSNYN+AISETV T GPAEVIYAVLSNG+QGRVDVKL+ LQ Sbjct: 397 KNTGRIVCDAIGGDFSNYNKAISETVLTRCGPAEVIYAVLSNGVQGRVDVKLAGLQ 452
>PBLFB_EUGGR (P84741) Photoactivated adenylate cyclase beta-subunit-like protein| FB Length = 859 Score = 32.0 bits (71), Expect = 1.4 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -2 Query: 520 LRGAIACAYSLRYGPVVVREVAANGVADYPRXXXXXXXXXFSVMEVEA 377 +RG ++C L YG VV+ + + G+ +Y VMEVEA Sbjct: 706 VRGCVSCGVGLEYGQVVMAQCGSMGLTEY----VVAGAVSARVMEVEA 749
>VPS54_RAT (Q9JMK8) Vacuolar protein sorting protein 54 (Vps54-like protein)| Length = 965 Score = 31.6 bits (70), Expect = 1.8 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = +2 Query: 137 AELPRQGRYMAEVFAVRIPATAGADPPSG-TISFHGGHCSSDFIYSPEEEHASQQTSCDS 313 A L +G ++++ F+ PA+A D S S H CSSD + PE S + + Sbjct: 497 AYLTHEGLFISDAFSEAEPASAAVDTTSQRNTSPHSEPCSSDSVSEPECTTDSSSSKEQT 556 Query: 314 QGNIVLTGPSVATS 355 + L G + S Sbjct: 557 PASATLGGVDIIVS 570
>PCYAB_EUGGR (Q8S9F1) Photoactivated adenylate cyclase subunit beta (EC 4.6.1.1)| (Photoactivated adenylyl cyclase beta subunit) Length = 859 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = -2 Query: 520 LRGAIACAYSLRYGPVVVREVAANGVADYPRXXXXXXXXXFSVMEVEA 377 +RG ++C L YG VV+ + + G+ +Y VMEVEA Sbjct: 706 VRGCVSCGVGLDYGQVVMAQCGSLGLTEY----VVAGAVSARVMEVEA 749
>GUNC_CELFI (P14090) Endoglucanase C precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase C) (Cellulase C) Length = 1101 Score = 30.8 bits (68), Expect = 3.0 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = +2 Query: 86 AATGYGDAPTDEQLLAYAELPRQGRYMAEVF--AVRIPATAGADPPSGTISFHGGHCSSD 259 A G AP L L + R + E F + PAT AD P G I+F G S+D Sbjct: 108 ALVGQNGAPYGTVLDTSPALTSEPRQVTETFTASATYPATPAADDPEGQIAFQLGGFSAD 167
>PCYAB_ASTLO (Q76L33) Photoactivated adenylate cyclase subunit beta (EC 4.6.1.1)| (Photoactivated adenylyl cyclase beta subunit) Length = 860 Score = 29.6 bits (65), Expect = 6.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 520 LRGAIACAYSLRYGPVVVREVAANGVADYPRXXXXXXXXXFSVMEVEA 377 +RG ++C L YG VV+ + + G+ +Y VMEVE+ Sbjct: 706 VRGCVSCGVGLDYGQVVMAQCGSLGLTEY----VVAGAVSARVMEVES 749 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,676,785 Number of Sequences: 219361 Number of extensions: 1232957 Number of successful extensions: 3670 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3583 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3667 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5101629520 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)