ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart22a04 |
|---|---|
| Clone Library Name | barley_pub |
>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor| Length = 254 Score = 65.1 bits (157), Expect = 2e-10 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 2/138 (1%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 395 N+T +L AG + F+ + ST QAN ++ G T+F P D+AF + K L++L Sbjct: 46 NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105 Query: 396 SQQDQVTLVQAHIVPTFYSMESFE--TASNPVRTQASGTDGPCTVNVTATSNSAVNVSTG 569 ++ LV H +P +YS+ F+ + S PV T A G +V+ T V + + Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGT----VRIDSL 161 Query: 570 IVYTTVGTALRATRPLAV 623 T V +++ +T P+AV Sbjct: 162 WTRTKVSSSVFSTDPVAV 179
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 57.4 bits (137), Expect = 3e-08 Identities = 41/140 (29%), Positives = 69/140 (49%) Frame = +3 Query: 204 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 383 A+ N+T +LEKAG T F L+ S+ L + + G TVFAP+D AF + Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEAFKAEGVPD 240 Query: 384 LNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSAVNVS 563 L L+Q + V+L++ H + + S +T N + T A+ G + T+TS V + Sbjct: 241 LTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDL-TTSTSGDEVILH 299 Query: 564 TGIVYTTVGTALRATRPLAV 623 TG+ + + + P+ + Sbjct: 300 TGVAPSRLADTVLDATPVVI 319
>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor| Length = 422 Score = 53.5 bits (127), Expect = 5e-07 Identities = 38/123 (30%), Positives = 63/123 (51%) Frame = +3 Query: 204 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 383 A N+T +LEKAG T F L+ S+ + + + G TVFAP+D AF + Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEAFKARGVPD 241 Query: 384 LNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCTVNVTATSNSAVNVS 563 L +L+Q + V+L++ H + + S +T + + T A+ G + T+TS V + Sbjct: 242 LTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDL-TTSTSGDEVILH 300 Query: 564 TGI 572 TG+ Sbjct: 301 TGV 303
>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor| Length = 180 Score = 46.6 bits (109), Expect = 6e-05 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Frame = +3 Query: 204 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 383 AA + ++E A F L+A+ + + A + E FTVFAPT++AF +L GT Sbjct: 40 AATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALSAEGP--FTVFAPTNDAFAALPAGT 97 Query: 384 LNSL----SQQDQVTLVQAHIVP---TFYSMESFETASNPVRTQA-SGTDGPCTVNVTAT 539 + SL ++ V ++ H+VP T ++S E AS DG VN Sbjct: 98 VESLLLPENKDKLVKILTYHVVPGKITAAQVQSGEVASLAGEALTFKVKDGKVKVNKATV 157 Query: 540 SNSAVNVSTGIVY 578 ++ V+ S G+++ Sbjct: 158 ISADVDASNGVIH 170
>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like| laminin-type EGF-like and link domain-containing scavenger receptor 1) (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Hyaluronan receptor for endocytosis) [ Length = 2551 Score = 45.1 bits (105), Expect = 2e-04 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 14/132 (10%) Frame = +3 Query: 246 QYTKFIRLMASTQQDTQLNAQANESDTG--FTVFAPTDNAFNSLKPGTLNSL----SQQD 407 +Y+KF L+ ++T L +E G +T+F P + A N++K GTL+ L + Sbjct: 527 RYSKFRSLL----EETNLGHALDEDGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRK 582 Query: 408 QVTLVQAHIVPTFYSMESFETASNP-VRTQA-------SGTDGPCTVNVTATSNSAVNVS 563 + LV+ HIVP F +E S P +R+ A + +G N A + Sbjct: 583 LLELVRYHIVP-FTQLEVATLISTPHIRSMANQLIQFNTTDNGQILANDVAMEEIEITAK 641 Query: 564 TGIVYTTVGTAL 599 G +YT G + Sbjct: 642 NGRIYTLTGVLI 653
>PAM1_YEAST (P37304) Protein PAM1| Length = 830 Score = 39.3 bits (90), Expect = 0.010 Identities = 27/75 (36%), Positives = 34/75 (45%) Frame = +3 Query: 342 APTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGTDGPCT 521 AP N NS P L SLSQ + Q +I +F T+ NP GT T Sbjct: 733 APCVNQLNSDSPPQLQSLSQNGTSKVPQINITQPSPIQTNFATSDNPAAVIKLGTPSEDT 792 Query: 522 VNVTATSNSAVNVST 566 V+ AT+N N+ST Sbjct: 793 VSAAATAN---NIST 804
>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog| Length = 133 Score = 39.3 bits (90), Expect = 0.010 Identities = 22/48 (45%), Positives = 28/48 (58%) Frame = +3 Query: 258 FIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 401 F L+A+ Q + A E D FTVFAP D+AF L PGT+ +L Q Sbjct: 14 FSTLVAAVQAAGLVETLAGEGD--FTVFAPNDDAFAKLPPGTIQTLVQ 59
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 38.9 bits (89), Expect = 0.012 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 1/100 (1%) Frame = +3 Query: 327 GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQASGT 506 G TVF P D+A P N L+ + + VPT+YSM ++ + P+ T A T Sbjct: 220 GMTVFCPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLA--T 276 Query: 507 DGPCTVNVTATSN-SAVNVSTGIVYTTVGTALRATRPLAV 623 DG +T ++ V + T I + L +PLA+ Sbjct: 277 DGANKFELTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAI 316
>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 37.7 bits (86), Expect = 0.028 Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 11/94 (11%) Frame = +3 Query: 330 FTVFAPTDNAFNSLKPGTLNSL--SQQDQVTLVQAHI---------VPTFYSMESFETAS 476 +TVFAPT+ AF +L PG LN L + ++ +++ H+ + T ++S + Sbjct: 537 YTVFAPTNEAFQALPPGELNKLLGNAKELADILKYHVGEEILVSGGIGTLVRLKSLQGD- 595 Query: 477 NPVRTQASGTDGPCTVNVTATSNSAVNVSTGIVY 578 + + S + +VN + S + + G+VY Sbjct: 596 ---KLEVSSKNNAVSVNKEPVAESDIMATNGVVY 626 Score = 30.4 bits (67), Expect = 4.4 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 8/129 (6%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 395 N+ ++E + +A++ +T L ESD FT+ APT+ A + TLN + Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTLL-----ESDGQFTLLAPTNEAKEKIPTETLNRI 296 Query: 396 SQQDQV--TLVQAHIVPTFYSMESFETASNPVRTQASGTDGPC-----TVNVTA-TSNSA 551 + L+ HI+ + E+ + +A+ + C T+N A SN Sbjct: 297 LGDPEALRDLLNNHILKSAMCAEAIVAGLSMETLEATTLEVGCSGDMLTINGKAIISNKD 356 Query: 552 VNVSTGIVY 578 V + G+++ Sbjct: 357 VLATNGVIH 365
>Y1735_SYNY3 (P73392) Hypothetical protein sll1735| Length = 133 Score = 36.6 bits (83), Expect = 0.062 Identities = 17/29 (58%), Positives = 20/29 (68%) Frame = +3 Query: 315 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 401 +S FTVFAPTD AF L PGT+ +L Q Sbjct: 31 QSPGPFTVFAPTDTAFAKLPPGTITTLVQ 59
>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor| Length = 193 Score = 35.8 bits (81), Expect = 0.11 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 4/105 (3%) Frame = +3 Query: 294 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMES 461 QLN Q N DT +TVFAPT+ AF+ L T++ L + + T++ + Sbjct: 80 QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLT----SILTYHVVAG 135 Query: 462 FETASNPVRTQASGTDGPCTVNVTATSNSAVNVSTGIVYTTVGTA 596 + +N V T+ T +V VT NS + +V V TA Sbjct: 136 QTSPANVVGTRQ--TLQGASVTVTGQGNSLKVGNADVVCGGVSTA 178
>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor| Length = 193 Score = 35.8 bits (81), Expect = 0.11 Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 4/105 (3%) Frame = +3 Query: 294 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYSMES 461 QLN Q N DT +TVFAPT+ AF+ L T++ L + + T++ + Sbjct: 80 QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLT----SILTYHVVAG 135 Query: 462 FETASNPVRTQASGTDGPCTVNVTATSNSAVNVSTGIVYTTVGTA 596 + +N V T+ T +V VT NS + +V V TA Sbjct: 136 QTSPANVVGTRQ--TLQGASVTVTGQGNSLKVGNADVVCGGVSTA 178
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 35.4 bits (80), Expect = 0.14 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 8/129 (6%) Frame = +3 Query: 222 TAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 401 + +L +GQ + + T + L+ Q + GF VF+ T L GT++ + Sbjct: 1408 SGILFGSGQSSGITSVSGETSGISDLSGQPS----GFPVFSGTATRTPDLASGTISGSGE 1463 Query: 402 QDQVTLVQ---AHIVPTFYSME----SFETASNPV-RTQASGTDGPCTVNVTATSNSAVN 557 +T V + PT + E S E + P T+ SGT G TV+V+ S+ A++ Sbjct: 1464 SSGITFVDTSFVEVTPTTFREEEGLGSVELSGFPSGETELSGTSG--TVDVSEQSSGAID 1521 Query: 558 VSTGIVYTT 584 S+G+ T Sbjct: 1522 -SSGLTSPT 1529
>VPS33_YEAST (P20795) Vacuolar protein sorting 33 (SLP1 protein)| Length = 691 Score = 34.3 bits (77), Expect = 0.31 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +3 Query: 381 TLNSLSQQDQVTLVQAHIVPTFYSMESFE--TASNPVR 488 TLN +SQ D+V +VQ ++P S+ +F+ T S PVR Sbjct: 21 TLNEISQNDEVLVVQPSVLPVLNSLLTFQDLTQSTPVR 58
>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)| [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan receptor for endocytosis)] (Fragment) Length = 1431 Score = 34.3 bits (77), Expect = 0.31 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES-DTGFTVFAPTDNAFNSLKPGTLNS 392 N+T V G YTKF +L+ QD+ L + +S T TVF PTD A +L P + Sbjct: 607 NLTTVAANHG-YTKFSKLI----QDSGLLSVITDSIHTPVTVFWPTDKALEALPPEQQDF 661 Query: 393 LSQQDQVTLVQAHI 434 L QD +++++ Sbjct: 662 LFNQDNKDKLKSYL 675
>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau| Length = 775 Score = 33.9 bits (76), Expect = 0.40 Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 15/85 (17%) Frame = +2 Query: 278 DAAGHAAER--AGQRVGHGLHGVRPHRQRLQQPQAGHPQLAL-------------AAGPG 412 +AAGH + +G+ V G G R Q +G P L GP Sbjct: 116 EAAGHVTQEPESGKVVREGFLGEPGPRSXSHQLASGMPGAPLLPEGPREATRQPSGTGPE 175 Query: 413 DARAGAHRPHLLLHGVLRDRQQPRP 487 D G H P LL H +L D Q P Sbjct: 176 DTEGGRHAPELLKHQLLGDLHQEGP 200
>HA34_BRELC (Q99074) HAM34 protein| Length = 173 Score = 33.5 bits (75), Expect = 0.52 Identities = 26/108 (24%), Positives = 44/108 (40%) Frame = +3 Query: 273 ASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYS 452 AST+Q T +A + G T P D + P + + + + Sbjct: 55 ASTEQTTTAGPEAAGATNGTTTTPPADGTQTATAPLDATATEESSASGEMTPTVGTDTSD 114 Query: 453 MESFETASNPVRTQASGTDGPCTVNVTATSNSAVNVSTGIVYTTVGTA 596 S TA+ P + S T G T + +S+SA + ++G +TT+ A Sbjct: 115 QVSDSTAAGPSTPEGSMT-GTSTPKASDSSSSATDTTSGASHTTMAVA 161
>CROC_DROME (P32027) Fork head domain protein crocodile (FKH protein FD1)| Length = 508 Score = 33.5 bits (75), Expect = 0.52 Identities = 23/83 (27%), Positives = 33/83 (39%) Frame = +2 Query: 248 VHQVHPADGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAGPGDARAG 427 +H VH A AA H A++ + V H H + P Q +GH ++ G A G Sbjct: 295 MHHVHHA----AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGG 350 Query: 428 AHRPHLLLHGVLRDRQQPRPHPG 496 + P +P PH G Sbjct: 351 WYTPE-------TPPSEPVPHNG 366
>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) Length = 683 Score = 33.1 bits (74), Expect = 0.68 Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 13/147 (8%) Frame = +3 Query: 213 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 392 P + V++ +F L+A+ Q + E +TVFAPT+ AF ++ P LN Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGV--YTVFAPTNEAFQAMPPEELNK 557 Query: 393 L--SQQDQVTLVQAHI---------VPTFYSMESFETASNPVRTQASGTDGPCTVNVTAT 539 L + ++ +++ HI + ++S + + + S + +VN Sbjct: 558 LLANAKELTNILKYHIGDEILVSGGIGALVRLKSLQGD----KLEVSSKNNVVSVNKEPV 613 Query: 540 SNSAVNVSTGIVYTTVGTALR--ATRP 614 + + + + G+VY + T L+ A RP Sbjct: 614 AETDIMATNGVVY-AINTVLQPPANRP 639 Score = 29.6 bits (65), Expect = 7.6 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 9/130 (6%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 395 N+ ++E + +A++ +T L E D FT+ APT+ AF + TLN + Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTVL-----EGDGQFTLLAPTNEAFEKIPAETLNRI 296 Query: 396 SQQDQV--TLVQAHIVPTFYSME------SFETASNPVRTQASGTDGPCTVNVTAT-SNS 548 + L+ HI+ + E S ET D T+N A SN Sbjct: 297 LGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGD-KLTINGKAVISNK 355 Query: 549 AVNVSTGIVY 578 + + G+++ Sbjct: 356 DILATNGVIH 365 Score = 29.3 bits (64), Expect = 9.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +3 Query: 315 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA 428 E FT+FAP++ A++SL L+SL + L+ A Sbjct: 133 EGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNA 170
>POSTN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast-specific factor 2)| (OSF-2) Length = 836 Score = 32.7 bits (73), Expect = 0.89 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 11/97 (11%) Frame = +3 Query: 321 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES------FETA 473 D FT+FAPT+ AF L G L + D+V L++ HI+ T ES FET Sbjct: 266 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSESIMGGAVFETL 324 Query: 474 SNPVRTQASGTDG-PCTVN-VTATSNSAVNVSTGIVY 578 T G DG TVN + + + + G+++ Sbjct: 325 EG--NTIEIGCDGDSITVNGIKMVNKKDIVTNNGVIH 359
>BGH3_PIG (O11780) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 32.0 bits (71), Expect = 1.5 Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 11/141 (7%) Frame = +3 Query: 213 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 392 P + V++ +F L+A+ Q L N +TVFAPT+ AF +L G N Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQS-AGLTETLNREGV-YTVFAPTNEAFQALPLGERNK 557 Query: 393 L--SQQDQVTLVQAHI---------VPTFYSMESFETASNPVRTQASGTDGPCTVNVTAT 539 L + ++ +++ H+ + ++S + + + S + TVN Sbjct: 558 LLGNAKELANILKYHVGDEILVSGGIGALVRLKSLQGD----KLEVSSKNSLVTVNKEPV 613 Query: 540 SNSAVNVSTGIVYTTVGTALR 602 + + + + G+V+ T+ T LR Sbjct: 614 AEADIMATNGVVH-TINTVLR 633
>MP70_MYCKA (Q49614) Immunogenic protein MPT70 analog precursor (Fragment)| Length = 121 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%) Frame = +3 Query: 294 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 395 +LN Q N DT +TVFAPTD AF+ L T+ L Sbjct: 78 RLNPQVNLVDTLNNGQYTVFAPTDPAFDKLPASTIVQL 115
>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)| Length = 2571 Score = 31.2 bits (69), Expect = 2.6 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 4/101 (3%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 395 NVTA E G Y F RL+ L + S FT+ PTD+A +L P N L Sbjct: 1728 NVTAAAESFG-YKIFSRLLTVAGLLPMLQ---DASHRPFTMLWPTDSALQALPPDRKNWL 1783 Query: 396 SQQDQ----VTLVQAHIVPTFYSMESFETASNPVRTQASGT 506 +D +++ H++ ++ S +RT T Sbjct: 1784 FHEDHRDKLAAILRGHMIRNIEALASDLPNLGQLRTMHGNT 1824
>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1381 Score = 30.8 bits (68), Expect = 3.4 Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Frame = +3 Query: 273 ASTQQDTQLNAQANESDTGFTVFAP-TDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFY 449 A +D++ NAQ E+D T F P ++L +L D++ +Q +PT Sbjct: 281 AEEDRDSKTNAQTAETDADDTEFEPQAGEDEDNLSDDSL------DEIISLQVPTLPTTV 334 Query: 450 SMESFETASNPVRTQASGTDGPCTVNVTATSNSA 551 + +S P + T+GP +V + T+ +A Sbjct: 335 TGQSTIGTGTPTMLRGRKTNGPGSVISSYTATTA 368
>VID21_EMENI (Q5B4Q8) Chromatin modification-related protein vid21| Length = 1447 Score = 30.4 bits (67), Expect = 4.4 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = +2 Query: 359 LQQPQAGHPQLALAAGPGDARAGAHRPHLL-LHGVLRDRQQPRPHP 493 +QQ A P +A+ A P +AR L +L+ RQQP HP Sbjct: 1149 MQQNNAPRPNMAMQASPDNARVIREANRLQEQQRILQSRQQPSQHP 1194
>CADN_DROME (O15943) Neural-cadherin precursor (Cadherin-N protein)| (DN-cadherin) Length = 3097 Score = 30.0 bits (66), Expect = 5.8 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 8/103 (7%) Frame = +3 Query: 333 TVFA--PTDNAFNSL--KPGTL--NSLSQQDQVTLVQAHIVPTFYSMESFETASNPVRTQ 494 T FA +NA L PG + +SLS +++LV H +S++ F+T +PV+ Sbjct: 40 TTFAGLSAENAARMLAGSPGDVEKSSLSHHSEMSLVLPHDTYPGFSIKKFKT--HPVKIN 97 Query: 495 ASGTDGPCTVNVTATSNSA--VNVSTGIVYTTVGTALRATRPL 617 S G ++ T S + G+V TT + RP+ Sbjct: 98 GSSHSGAAAYHMLDTDYSKYFTVLEDGVVMTTADISPLVNRPV 140
>Y200_MYCPN (Q50288) Hypothetical lipoprotein MPN200 precursor (GT9_orf798)| Length = 798 Score = 30.0 bits (66), Expect = 5.8 Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 7/130 (5%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 395 N+ E + T I++ TQ +++ ++ + ++ A T NS + ++ Sbjct: 465 NLLGTFEVVDKSTSDIKVKPKTQAESKKSSDSKQT-------ANTGKGSNSKQQTPKKTI 517 Query: 396 S------QQDQVTLVQAHIVPTFYSMESFETASNPVR-TQASGTDGPCTVNVTATSNSAV 554 S QD+ V A +V + E A N T+ASG V V AT Sbjct: 518 SLYKTKIPQDKTENVDAFLVTDSELISKLEKAKNKKEETKASGKSASARVAVQATQKKQS 577 Query: 555 NVSTGIVYTT 584 N + YTT Sbjct: 578 NEKQIVGYTT 587
>PTPRV_RAT (Q64612) Receptor-type tyrosine-protein phosphatase V precursor (EC| 3.1.3.48) (Embryonic stem cell protein-tyrosine phosphatase) (ES cell phosphatase) (Osteotesticular protein-tyrosine phosphatase) (OST-PTP) Length = 1711 Score = 30.0 bits (66), Expect = 5.8 Identities = 24/81 (29%), Positives = 33/81 (40%) Frame = +3 Query: 273 ASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIVPTFYS 452 + + + QL A NES GF + LK L Q +TL A PT Sbjct: 76 SGSPEGQQLQAHTNES--GFEFHGLVPGSRYQLKLTVLRPCWQNVTITLT-ARTAPTVVR 132 Query: 453 MESFETASNPVRTQASGTDGP 515 +A +P R +AS +D P Sbjct: 133 GLQLHSAGSPARLEASWSDAP 153
>POSTN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast-specific factor 2)| (OSF-2) Length = 838 Score = 29.6 bits (65), Expect = 7.6 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +3 Query: 321 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES 461 D FT+FAPT+ AF L G L + D+V L++ HI+ T E+ Sbjct: 268 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSEA 316
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 29.6 bits (65), Expect = 7.6 Identities = 22/73 (30%), Positives = 34/73 (46%) Frame = +3 Query: 216 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 395 N+T V G YTKF +L+ Q L + T T+F PTD A +L + L Sbjct: 1750 NLTTVAANHG-YTKFSKLI---QDSGLLKVITDPMHTPVTLFWPTDKALQALPQEQQDFL 1805 Query: 396 SQQDQVTLVQAHI 434 +D ++A++ Sbjct: 1806 FNEDNKDKLKAYL 1818
>TAU_PANTR (Q5YCW1) Microtubule-associated protein tau| Length = 775 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 404 GPGDARAGAHRPHLLLHGVLRDRQQPRP 487 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_GORGO (Q5YCW0) Microtubule-associated protein tau| Length = 775 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 404 GPGDARAGAHRPHLLLHGVLRDRQQPRP 487 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_PONPY (Q5S6V2) Microtubule-associated protein tau| Length = 757 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 404 GPGDARAGAHRPHLLLHGVLRDRQQPRP 487 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>TAU_HUMAN (P10636) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 757 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +2 Query: 404 GPGDARAGAHRPHLLLHGVLRDRQQPRP 487 GP D G H P LL H +L D Q P Sbjct: 173 GPEDTEGGRHAPELLKHQLLGDLHQEGP 200
>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)| (Scaffold attachment factor A) (SAF-A) (p120) (pp120) Length = 824 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/46 (36%), Positives = 20/46 (43%) Frame = +2 Query: 269 DGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAG 406 +G D G E AG GHG +P + QQPQ AAG Sbjct: 140 EGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAAKEAAG 185
>MPA92_POAPR (P22285) Pollen allergen KBG 41 precursor (Pollen allergen Poa p 9)| (Poa p IX) Length = 333 Score = 29.3 bits (64), Expect = 9.9 Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 14/115 (12%) Frame = +3 Query: 303 AQANESDTGFTVF---------APTDNAFNSLK--PGTLNSLSQQDQVTLVQAHIVPTFY 449 A A ++ FTVF A T A+ S K P ++ Q T+ A V Y Sbjct: 206 ANAAPANDKFTVFEAAFNDAIKASTGGAYQSYKFIPALEAAVKQSYAATVATAPAVK--Y 263 Query: 450 SMESFETASNPVRT---QASGTDGPCTVNVTATSNSAVNVSTGIVYTTVGTALRA 605 ++ FETA T QA P VTAT+ AV +TG V G A A Sbjct: 264 TV--FETALKKAITAMSQAQKAAKPAAA-VTATATGAVGAATGAVGAATGAATAA 315
>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)| Length = 220 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +3 Query: 294 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 437 +LN N DT +TVFAPT+ AF+ L T++ L ++ +++ H++ Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159
>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)| Length = 220 Score = 29.3 bits (64), Expect = 9.9 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +3 Query: 294 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 437 +LN N DT +TVFAPT+ AF+ L T++ L ++ +++ H++ Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,090,788 Number of Sequences: 219361 Number of extensions: 680278 Number of successful extensions: 2850 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2700 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2836 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
