Clone Name | bart21h03 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK102360.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091I08, full insert sequence Length = 1277 Score = 329 bits (166), Expect = 6e-87 Identities = 423/508 (83%), Gaps = 3/508 (0%) Strand = Plus / Plus Query: 81 ccatggcgatctccacggattcgcgcagcgaggag---aagccttcgcagcattctcagg 137 ||||||||||| |||| || |||||| |||||||| ||| |||||| |||||| |||| Sbjct: 76 ccatggcgatcgccaccgagtcgcgctgcgaggaggagaaggcttcgccgcattcgcagg 135 Query: 138 aggagaagcggtgggtgttgtccgacttcgatgttgggaaagcacttgggaggggcaagt 197 ||| |||||||||||||||||| || || || | ||||| | || ||||||||||||| Sbjct: 136 aggtgaagcggtgggtgttgtctgattttgacatcgggaagcccctcgggaggggcaagt 195 Query: 198 ttggccatgtctacttggccagagagaagaggagtagtcacattgtagctttgaaagttc 257 | |||||||| ||||| || ||||| ||||| |||| || ||||| ||||||||||| | Sbjct: 196 tcggccatgtttacttagcaagagaaaagagaagtaaccatattgtggctttgaaagtac 255 Query: 258 ttttcaagagccaactgaagcaatcccaggtggagcatcagctgcggcgtgaagtagaga 317 |||||||||||||||| ||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 256 ttttcaagagccaactaaagcagtcccaggtggagcatcagctacgtcgggaagttgaga 315 Query: 318 tccagagtcaccttaggcaccccaatattcttcgcttatatgggtatttttatgatcaga 377 | |||||||| ||| | || ||||| ||||| || | ||||||||||| |||||||||| Sbjct: 316 ttcagagtcatcttcgtcatcccaacattctacggctgtatgggtatttctatgatcaga 375 Query: 378 cccgtgtttacctaatcttggaacatgctgcaaaaggagagctctacaaggagttgcaga 437 ||||||| ||| | |||||||| |||| |||||| || || || ||||||||||||| Sbjct: 376 cccgtgtgtacttgatcttggagtatgccttaaaaggtgaactttataaggagttgcaga 435 Query: 438 gatgcaagcatttctctgaaagacgctccgcaacttacattgcatcattggcacgtgccc 497 | ||||||||||||||||||||||| || || ||||||||||||||| |||| | ||| | Sbjct: 436 ggtgcaagcatttctctgaaagacgttcagcgacttacattgcatcactggcgcatgcgc 495 Query: 498 tgatttatcttcacgggaagcacgtgatacatcgagatattaaaccggaaaaccttttag 557 | || || |||||||| ||||| ||||| ||| |||| |||||||| ||||| |||||| Sbjct: 496 tcatctaccttcacggaaagcatgtgatccatagagacattaaacctgaaaatcttttaa 555 Query: 558 ttggggtgcagggcgagctgaagattgc 585 ||||| |||||||| ||||| ||||| Sbjct: 556 ttgggtcccagggcgaactgaaaattgc 583
>dbj|AK061360.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B11, full insert sequence Length = 1239 Score = 329 bits (166), Expect = 6e-87 Identities = 423/508 (83%), Gaps = 3/508 (0%) Strand = Plus / Plus Query: 81 ccatggcgatctccacggattcgcgcagcgaggag---aagccttcgcagcattctcagg 137 ||||||||||| |||| || |||||| |||||||| ||| |||||| |||||| |||| Sbjct: 38 ccatggcgatcgccaccgagtcgcgctgcgaggaggagaaggcttcgccgcattcgcagg 97 Query: 138 aggagaagcggtgggtgttgtccgacttcgatgttgggaaagcacttgggaggggcaagt 197 ||| |||||||||||||||||| || || || | ||||| | || ||||||||||||| Sbjct: 98 aggtgaagcggtgggtgttgtctgattttgacatcgggaagcccctcgggaggggcaagt 157 Query: 198 ttggccatgtctacttggccagagagaagaggagtagtcacattgtagctttgaaagttc 257 | |||||||| ||||| || ||||| ||||| |||| || ||||| ||||||||||| | Sbjct: 158 tcggccatgtttacttagcaagagaaaagagaagtaaccatattgtggctttgaaagtac 217 Query: 258 ttttcaagagccaactgaagcaatcccaggtggagcatcagctgcggcgtgaagtagaga 317 |||||||||||||||| ||||| |||||||||||||||||||| || || ||||| |||| Sbjct: 218 ttttcaagagccaactaaagcagtcccaggtggagcatcagctacgtcgggaagttgaga 277 Query: 318 tccagagtcaccttaggcaccccaatattcttcgcttatatgggtatttttatgatcaga 377 | |||||||| ||| | || ||||| ||||| || | ||||||||||| |||||||||| Sbjct: 278 ttcagagtcatcttcgtcatcccaacattctacggctgtatgggtatttctatgatcaga 337 Query: 378 cccgtgtttacctaatcttggaacatgctgcaaaaggagagctctacaaggagttgcaga 437 ||||||| ||| | |||||||| |||| |||||| || || || ||||||||||||| Sbjct: 338 cccgtgtgtacttgatcttggagtatgccttaaaaggtgaactttataaggagttgcaga 397 Query: 438 gatgcaagcatttctctgaaagacgctccgcaacttacattgcatcattggcacgtgccc 497 | ||||||||||||||||||||||| || || ||||||||||||||| |||| | ||| | Sbjct: 398 ggtgcaagcatttctctgaaagacgttcagcgacttacattgcatcactggcgcatgcgc 457 Query: 498 tgatttatcttcacgggaagcacgtgatacatcgagatattaaaccggaaaaccttttag 557 | || || |||||||| ||||| ||||| ||| |||| |||||||| ||||| |||||| Sbjct: 458 tcatctaccttcacggaaagcatgtgatccatagagacattaaacctgaaaatcttttaa 517 Query: 558 ttggggtgcagggcgagctgaagattgc 585 ||||| |||||||| ||||| ||||| Sbjct: 518 ttgggtcccagggcgaactgaaaattgc 545
>ref|NM_189670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1299 Score = 285 bits (144), Expect = 8e-74 Identities = 386/466 (82%), Gaps = 3/466 (0%) Strand = Plus / Plus Query: 120 cttcgcagcattctcaggaggagaagcggtgggtgttgtccgacttcgatgttgggaaag 179 |||||| |||||| ||||||| |||||||||||||||||| || || || | ||||| Sbjct: 464 cttcgccgcattcgcaggaggtgaagcggtgggtgttgtctgattttgacatcgggaagc 523 Query: 180 cacttgggaggggcaagtttggccatgtctacttggccagagagaagaggagtagtcaca 239 | || |||||||||||||| |||||||| ||||| || ||||| ||||| |||| || | Sbjct: 524 ccctcgggaggggcaagttcggccatgtttacttagcaagagaaaagagaagtaaccata 583 Query: 240 ttgtagctttgaaagttcttttcaagagccaactgaagcaatcccaggtggagcatcagc 299 |||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 584 ttgtggctttgaaagtacttttcaagagccaactaaagcagtcccaggtggagcatcagc 643 Query: 300 tgcggcgtgaagtagagatccagagtcaccttaggcaccccaatattcttcgcttatatg 359 | || || ||||| ||||| |||||||| ||| | || ||||| ||||| || | |||| Sbjct: 644 tacgtcgggaagttgagattcagagtcatcttcgtcatcccaacattctacggctgtatg 703 Query: 360 ggtatttttatgatcagacccgtgtttacctaatcttggaacatgctgcaaaaggagagc 419 ||||||| |||||| |||||||| ||| | |||||||| |||| |||||| || | Sbjct: 704 ggtatttctatgat---acccgtgtgtacttgatcttggagtatgccttaaaaggtgaac 760 Query: 420 tctacaaggagttgcagagatgcaagcatttctctgaaagacgctccgcaacttacattg 479 | || |||||||||||||| ||||||||||||||||||||||| || || |||||||||| Sbjct: 761 tttataaggagttgcagaggtgcaagcatttctctgaaagacgttcagcgacttacattg 820 Query: 480 catcattggcacgtgccctgatttatcttcacgggaagcacgtgatacatcgagatatta 539 ||||| |||| | ||| || || || |||||||| ||||| ||||| ||| |||| |||| Sbjct: 821 catcactggcgcatgcgctcatctaccttcacggaaagcatgtgatccatagagacatta 880 Query: 540 aaccggaaaaccttttagttggggtgcagggcgagctgaagattgc 585 |||| ||||| |||||| ||||| |||||||| ||||| ||||| Sbjct: 881 aacctgaaaatcttttaattgggtcccagggcgaactgaaaattgc 926
>dbj|AB196736.1| Oryza sativa (japonica cultivar-group) OsAUR1 mRNA for Aurora kinase, complete cds Length = 1299 Score = 285 bits (144), Expect = 8e-74 Identities = 386/466 (82%), Gaps = 3/466 (0%) Strand = Plus / Plus Query: 120 cttcgcagcattctcaggaggagaagcggtgggtgttgtccgacttcgatgttgggaaag 179 |||||| |||||| ||||||| |||||||||||||||||| || || || | ||||| Sbjct: 464 cttcgccgcattcgcaggaggtgaagcggtgggtgttgtctgattttgacatcgggaagc 523 Query: 180 cacttgggaggggcaagtttggccatgtctacttggccagagagaagaggagtagtcaca 239 | || |||||||||||||| |||||||| ||||| || ||||| ||||| |||| || | Sbjct: 524 ccctcgggaggggcaagttcggccatgtttacttagcaagagaaaagagaagtaaccata 583 Query: 240 ttgtagctttgaaagttcttttcaagagccaactgaagcaatcccaggtggagcatcagc 299 |||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 584 ttgtggctttgaaagtacttttcaagagccaactaaagcagtcccaggtggagcatcagc 643 Query: 300 tgcggcgtgaagtagagatccagagtcaccttaggcaccccaatattcttcgcttatatg 359 | || || ||||| ||||| |||||||| ||| | || ||||| ||||| || | |||| Sbjct: 644 tacgtcgggaagttgagattcagagtcatcttcgtcatcccaacattctacggctgtatg 703 Query: 360 ggtatttttatgatcagacccgtgtttacctaatcttggaacatgctgcaaaaggagagc 419 ||||||| |||||| |||||||| ||| | |||||||| |||| |||||| || | Sbjct: 704 ggtatttctatgat---acccgtgtgtacttgatcttggagtatgccttaaaaggtgaac 760 Query: 420 tctacaaggagttgcagagatgcaagcatttctctgaaagacgctccgcaacttacattg 479 | || |||||||||||||| ||||||||||||||||||||||| || || |||||||||| Sbjct: 761 tttataaggagttgcagaggtgcaagcatttctctgaaagacgttcagcgacttacattg 820 Query: 480 catcattggcacgtgccctgatttatcttcacgggaagcacgtgatacatcgagatatta 539 ||||| |||| | ||| || || || |||||||| ||||| ||||| ||| |||| |||| Sbjct: 821 catcactggcgcatgcgctcatctaccttcacggaaagcatgtgatccatagagacatta 880 Query: 540 aaccggaaaaccttttagttggggtgcagggcgagctgaagattgc 585 |||| ||||| |||||| ||||| |||||||| ||||| ||||| Sbjct: 881 aacctgaaaatcttttaattgggtcccagggcgaactgaaaattgc 926
>gb|AY110122.1| Zea mays CL13686_1 mRNA sequence Length = 1067 Score = 159 bits (80), Expect = 1e-35 Identities = 137/156 (87%) Strand = Plus / Minus Query: 245 gctttgaaagttcttttcaagagccaactgaagcaatcccaggtggagcatcagctgcgg 304 |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 878 gctttgaaagttcttttcaagagccagctcaagcaatcacaggttgagcatcagctgcga 819 Query: 305 cgtgaagtagagatccagagtcaccttaggcaccccaatattcttcgcttatatgggtat 364 |||||||| ||||| |||||||| ||| | || || |||||||||||| | |||||||| Sbjct: 818 cgtgaagtggagattcagagtcatcttcgccatcctaatattcttcgcctgtatgggtac 759 Query: 365 ttttatgatcagacccgtgtttacctaatcttggaa 400 || |||||||||||| | |||||||||||| ||||| Sbjct: 758 ttctatgatcagaccagggtttacctaatcctggaa 723 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 138 aggagaagcggtgggtgttgtccgacttcgatgttgggaaagcacttgggaggggcaagt 197 ||||||||||||||||| |||| || ||||| ||||||||| | |||||||||||||||| Sbjct: 985 aggagaagcggtgggtgctgtctgatttcgaggttgggaaacctcttgggaggggcaagt 926 Query: 198 ttggccatgt 207 |||||||||| Sbjct: 925 ttggccatgt 916 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 506 cttcacgggaagcacgtgatacatcgagatattaaaccggaaaaccttttagttggggtg 565 ||||| || ||||| || || ||||| || |||||||| || || ||||||||||| || Sbjct: 617 cttcatggcaagcatgttatccatcgggacattaaaccagagaatcttttagttggagtt 558 Query: 566 cagggcgag 574 ||||||||| Sbjct: 557 cagggcgag 549
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 239 attgtagctttgaaagttcttttcaagagccaactgaagcaatcccaggtggagcatcag 298 ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 4910862 attgtggctttgaaagtacttttcaagagccaactaaagcagtcccaggtggagcatcag 4910803 Query: 299 ctgcggcgtgaagtagagatccagagtcaccttaggcaccccaatattcttcgcttatat 358 || || || ||||| ||||| |||||||| ||| | || ||||| ||||| || | ||| Sbjct: 4910802 ctacgtcgggaagttgagattcagagtcatcttcgtcatcccaacattctacggctgtat 4910743 Query: 359 gggtatttttatgatcag 376 |||||||| ||||||||| Sbjct: 4910742 gggtatttctatgatcag 4910725 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 120 cttcgcagcattctcaggaggagaagcggtgggtgttgtccgacttcgatgttgggaaag 179 |||||| |||||| ||||||| |||||||||||||||||| || || || | ||||| Sbjct: 4911986 cttcgccgcattcgcaggaggtgaagcggtgggtgttgtctgattttgacatcgggaagc 4911927 Query: 180 cacttgggaggggcaagtttggccatgtctacttggccagagagaagag 228 | || |||||||||||||| |||||||| ||||| || ||||| ||||| Sbjct: 4911926 ccctcgggaggggcaagttcggccatgtttacttagcaagagaaaagag 4911878 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 374 cagacccgtgtttacctaatcttggaacatgctgcaaaaggagagctctacaaggagttg 433 ||||||||||| ||| | |||||||| |||| |||||| || || || ||||||||| Sbjct: 4910634 cagacccgtgtgtacttgatcttggagtatgccttaaaaggtgaactttataaggagttg 4910575 Query: 434 cagagatgcaagcatttctctgaaagacg 462 ||||| ||||||||||||||||||||||| Sbjct: 4910574 cagaggtgcaagcatttctctgaaagacg 4910546 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 473 tacattgcatcattggcacgtgccctgatttatcttcacgggaagcacgtgatacatcga 532 |||||||||||| |||| | ||| || || || |||||||| ||||| ||||| ||| || Sbjct: 4910445 tacattgcatcactggcgcatgcgctcatctaccttcacggaaagcatgtgatccataga 4910386 Query: 533 gatattaaaccggaaaaccttttagttggg 562 || |||||||| ||||| |||||| ||||| Sbjct: 4910385 gacattaaacctgaaaatcttttaattggg 4910356
>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671B11 Length = 168372 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 239 attgtagctttgaaagttcttttcaagagccaactgaagcaatcccaggtggagcatcag 298 ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 11315 attgtggctttgaaagtacttttcaagagccaactaaagcagtcccaggtggagcatcag 11256 Query: 299 ctgcggcgtgaagtagagatccagagtcaccttaggcaccccaatattcttcgcttatat 358 || || || ||||| ||||| |||||||| ||| | || ||||| ||||| || | ||| Sbjct: 11255 ctacgtcgggaagttgagattcagagtcatcttcgtcatcccaacattctacggctgtat 11196 Query: 359 gggtatttttatgatcag 376 |||||||| ||||||||| Sbjct: 11195 gggtatttctatgatcag 11178 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 120 cttcgcagcattctcaggaggagaagcggtgggtgttgtccgacttcgatgttgggaaag 179 |||||| |||||| ||||||| |||||||||||||||||| || || || | ||||| Sbjct: 12439 cttcgccgcattcgcaggaggtgaagcggtgggtgttgtctgattttgacatcgggaagc 12380 Query: 180 cacttgggaggggcaagtttggccatgtctacttggccagagagaagag 228 | || |||||||||||||| |||||||| ||||| || ||||| ||||| Sbjct: 12379 ccctcgggaggggcaagttcggccatgtttacttagcaagagaaaagag 12331 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 374 cagacccgtgtttacctaatcttggaacatgctgcaaaaggagagctctacaaggagttg 433 ||||||||||| ||| | |||||||| |||| |||||| || || || ||||||||| Sbjct: 11087 cagacccgtgtgtacttgatcttggagtatgccttaaaaggtgaactttataaggagttg 11028 Query: 434 cagagatgcaagcatttctctgaaagacg 462 ||||| ||||||||||||||||||||||| Sbjct: 11027 cagaggtgcaagcatttctctgaaagacg 10999 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 473 tacattgcatcattggcacgtgccctgatttatcttcacgggaagcacgtgatacatcga 532 |||||||||||| |||| | ||| || || || |||||||| ||||| ||||| ||| || Sbjct: 10898 tacattgcatcactggcgcatgcgctcatctaccttcacggaaagcatgtgatccataga 10839 Query: 533 gatattaaaccggaaaaccttttagttggg 562 || |||||||| ||||| |||||| ||||| Sbjct: 10838 gacattaaacctgaaaatcttttaattggg 10809
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 123 bits (62), Expect = 7e-25 Identities = 119/138 (86%) Strand = Plus / Minus Query: 239 attgtagctttgaaagttcttttcaagagccaactgaagcaatcccaggtggagcatcag 298 ||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 155511 attgtggctttgaaagtacttttcaagagccaactaaagcagtcccaggtggagcatcag 155452 Query: 299 ctgcggcgtgaagtagagatccagagtcaccttaggcaccccaatattcttcgcttatat 358 || || || ||||| ||||| |||||||| ||| | || ||||| ||||| || | ||| Sbjct: 155451 ctacgtcgggaagttgagattcagagtcatcttcgtcatcccaacattctacggctgtat 155392 Query: 359 gggtatttttatgatcag 376 |||||||| ||||||||| Sbjct: 155391 gggtatttctatgatcag 155374 Score = 73.8 bits (37), Expect = 6e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 120 cttcgcagcattctcaggaggagaagcggtgggtgttgtccgacttcgatgttgggaaag 179 |||||| |||||| ||||||| |||||||||||||||||| || || || | ||||| Sbjct: 156635 cttcgccgcattcgcaggaggtgaagcggtgggtgttgtctgattttgacatcgggaagc 156576 Query: 180 cacttgggaggggcaagtttggccatgtctacttggccagagagaagag 228 | || |||||||||||||| |||||||| ||||| || ||||| ||||| Sbjct: 156575 ccctcgggaggggcaagttcggccatgtttacttagcaagagaaaagag 156527 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 374 cagacccgtgtttacctaatcttggaacatgctgcaaaaggagagctctacaaggagttg 433 ||||||||||| ||| | |||||||| |||| |||||| || || || ||||||||| Sbjct: 155283 cagacccgtgtgtacttgatcttggagtatgccttaaaaggtgaactttataaggagttg 155224 Query: 434 cagagatgcaagcatttctctgaaagacg 462 ||||| ||||||||||||||||||||||| Sbjct: 155223 cagaggtgcaagcatttctctgaaagacg 155195 Score = 60.0 bits (30), Expect = 9e-06 Identities = 75/90 (83%) Strand = Plus / Minus Query: 473 tacattgcatcattggcacgtgccctgatttatcttcacgggaagcacgtgatacatcga 532 |||||||||||| |||| | ||| || || || |||||||| ||||| ||||| ||| || Sbjct: 155094 tacattgcatcactggcgcatgcgctcatctaccttcacggaaagcatgtgatccataga 155035 Query: 533 gatattaaaccggaaaaccttttagttggg 562 || |||||||| ||||| |||||| ||||| Sbjct: 155034 gacattaaacctgaaaatcttttaattggg 155005
>gb|BC073103.1| Xenopus laevis MGC83575 protein, mRNA (cDNA clone MGC:83575 IMAGE:5079557), complete cds Length = 2446 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccccaatat 345 |||||||| || ||| ||||||| ||||||||||| ||||||||||||||| ||||| Sbjct: 532 gtggagcaccaactgaggcgtgagatagagatccagtctcaccttaggcacccaaatat 590
>ref|NM_001016859.2| Xenopus tropicalis hypothetical protein LOC549613 (LOC549613), mRNA Length = 995 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| || ||||||||||| ||||||||||| |||||| |||||||| Sbjct: 363 gtggagcaccaactgcggcgtgagatagagatccagtctcacctcaggcaccc 415
>gb|BC077339.1| Xenopus laevis similar to serine/threonine kinase 12, mRNA (cDNA clone MGC:80356 IMAGE:5074429), complete cds Length = 2091 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| |||||||||||||| ||||||||||| |||||| || ||||| Sbjct: 472 gtggagcaccagctgcggcgtgagatagagatccagtctcacctcagacaccc 524
>gb|BC041288.1| Xenopus laevis similar to serine/threonine kinase 12, mRNA (cDNA clone IMAGE:4682403), partial cds Length = 2059 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| |||||||||||||| ||||||||||| |||||| || ||||| Sbjct: 430 gtggagcaccagctgcggcgtgagatagagatccagtctcacctcagacaccc 482
>emb|CT027921.1| Xenopus tropicalis finished cDNA, clone TEgg085p18 Length = 1950 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| || ||||||||||| ||||||||||| |||||| |||||||| Sbjct: 404 gtggagcaccaactgcggcgtgagatagagatccagtctcacctcaggcaccc 456
>emb|CT010443.3| M.truncatula DNA sequence from clone MTH2-76G21 on chromosome 3, complete sequence Length = 111543 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 182 cttgggaggggcaagtttggccatgtctacttggccagaga 222 ||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 61673 cttggtaggggcaaattcggccatgtctatttggccagaga 61633
>gb|AC146940.19| Medicago truncatula clone mth2-132l6, complete sequence Length = 125567 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 182 cttgggaggggcaagtttggccatgtctacttggccagaga 222 ||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 91209 cttggtaggggcaaattcggccatgtctatttggccagaga 91249
>gb|AC138017.15| Medicago truncatula clone mth2-6i3, complete sequence Length = 129585 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 182 cttgggaggggcaagtttggccatgtctacttggccagaga 222 ||||| |||||||| || ||||||||||| ||||||||||| Sbjct: 34308 cttggtaggggcaaattcggccatgtctatttggccagaga 34268
>gb|AY115554.1| Xenopus laevis aurora B mRNA, complete cds Length = 1086 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| |||||||||||||| ||||||||||| |||||| || ||||| Sbjct: 400 gtggagcaccagctgcggcgtgagatagagatccagtctcacctcagacaccc 452
>gb|AF292096.1|AF292096 Xenopus laevis protein kinase AIRK2 mRNA, complete cds Length = 1086 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| |||||||||||||| ||||||||||| |||||| || ||||| Sbjct: 400 gtggagcaccagctgcggcgtgagatagagatccagtctcacctcagacaccc 452
>emb|CR848658.2| Xenopus tropicalis finished cDNA, clone TGas109c10 Length = 995 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 287 gtggagcatcagctgcggcgtgaagtagagatccagagtcaccttaggcaccc 339 |||||||| || ||||||||||| ||||||||||| |||||| |||||||| Sbjct: 363 gtggagcaccaactgcggcgtgagatagagatccagtctcacctcaggcaccc 415
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence Length = 1653225 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 524 atacatcgagatattaaaccggaaaac 550 |||||||||||||||||||| |||||| Sbjct: 432501 atacatcgagatattaaacctgaaaac 432475
>gb|AC105379.11| Trypanosoma brucei chromosome 3 clone RPCI93-30P12, complete sequence Length = 165197 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 524 atacatcgagatattaaaccggaaaac 550 |||||||||||||||||||| |||||| Sbjct: 26547 atacatcgagatattaaacctgaaaac 26521
>ref|XM_821085.1| Trypanosoma brucei TREU927 clone RPCI93-30P12 casein kinase 1 (Tb927.3.1630) partial mRNA Length = 1203 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 524 atacatcgagatattaaaccggaaaac 550 |||||||||||||||||||| |||||| Sbjct: 481 atacatcgagatattaaacctgaaaac 507
>emb|Z81074.1|CEF32B6 Caenorhabditis elegans Cosmid F32B6, complete sequence Length = 27394 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 527 catcgagatattaaaccggaaaacct 552 ||||||||||| |||||||||||||| Sbjct: 10354 catcgagatataaaaccggaaaacct 10329
>ref|XM_802725.1| Trypanosoma cruzi strain CL Brener kinesin (Tc00.1047053506305.40) partial mRNA Length = 488 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 124 gcagcattctcaggaggagaagcggtgggt 153 ||||||| | |||||||||||||||||||| Sbjct: 199 gcagcatccacaggaggagaagcggtgggt 170
>ref|XM_813105.1| Trypanosoma cruzi strain CL Brener kinesin (Tc00.1047053506811.10) partial mRNA Length = 1837 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 124 gcagcattctcaggaggagaagcggtgggt 153 ||||||| | |||||||||||||||||||| Sbjct: 1548 gcagcatccacaggaggagaagcggtgggt 1519
>emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence Length = 164399 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 524 atacatcgagatattaaaccgg 545 |||||||||||||||||||||| Sbjct: 45004 atacatcgagatattaaaccgg 44983
>emb|CR388063.9| Zebrafish DNA sequence from clone CH211-248P16 in linkage group 18, complete sequence Length = 142119 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 cttttcaagagccaactgaagc 278 |||||||||||||||||||||| Sbjct: 138668 cttttcaagagccaactgaagc 138689
>emb|BX936456.6| Zebrafish DNA sequence from clone DKEY-266J9 in linkage group 18, complete sequence Length = 173079 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 257 cttttcaagagccaactgaagc 278 |||||||||||||||||||||| Sbjct: 136706 cttttcaagagccaactgaagc 136685
>ref|NM_069377.1| Caenorhabditis elegans F32B6.10 (F32B6.10) mRNA, complete cds Length = 1623 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 527 catcgagatattaaaccggaaaacct 552 ||||||||||| |||||||||||||| Sbjct: 682 catcgagatataaaaccggaaaacct 707
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggcga 89 |||||||||||||||||||||| Sbjct: 19673557 gccggccggccagccatggcga 19673578 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggc 87 |||||||||||||||||||| Sbjct: 10839201 gccggccggccagccatggc 10839220
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggcga 89 |||||||||||||||||||||| Sbjct: 8803170 gccggccggccagccatggcga 8803191 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gccggccggccagccatggc 87 |||||||||||||||||||| Sbjct: 14193560 gccggccggccagccatggc 14193541
>gb|AC135586.8| Homo sapiens 12 BAC RP13-672B3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 74913 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 186 ggaggggcaagtttggccatgt 207 |||||||||||||||||||||| Sbjct: 45296 ggaggggcaagtttggccatgt 45275
>dbj|AP005051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458G06 Length = 139109 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggcga 89 |||||||||||||||||||||| Sbjct: 33270 gccggccggccagccatggcga 33291
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggcga 89 |||||||||||||||||||||| Sbjct: 19599771 gccggccggccagccatggcga 19599792 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggc 87 |||||||||||||||||||| Sbjct: 10838900 gccggccggccagccatggc 10838919
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 68 gccggccggccagccatggcga 89 |||||||||||||||||||||| Sbjct: 53436 gccggccggccagccatggcga 53415
>gb|M86715.1|PFAARPHR P.falciparum 240 kDa antibody recognized protein mRNA, partial cds Length = 2363 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 524 atacatcgagatattaaaccgg 545 |||||||||||||||||||||| Sbjct: 2291 atacatcgagatattaaaccgg 2312
>ref|NM_111890.3| Arabidopsis thaliana kinase AT3G10540 mRNA, complete cds Length = 1955 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tgatacatcgagatattaaaccgga 546 ||||||||||||||||||| ||||| Sbjct: 712 tgatacatcgagatattaagccgga 736
>ref|XM_520351.1| PREDICTED: Pan troglodytes similar to olfactomedin related ER localized protein isoform 1; olfactomedin related ER localized protein; neuroblastoma protein; pancortin 1 (LOC464841), mRNA Length = 5826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 497 cgcagccgccggccggccagc 517
>gb|AE001419.2| Plasmodium falciparum 3D7 chromosome 2 section 56 of 73 of the complete sequence Length = 16882 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 525 tacatcgagatattaaaccggaaaa 549 ||||||||||||||||||| ||||| Sbjct: 5505 tacatcgagatattaaaccagaaaa 5529
>gb|AC134047.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052O08 map MAP_LOC, complete sequence Length = 154839 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 cgcaacttacattgcatcattggca 490 |||||||||||| |||||||||||| Sbjct: 122726 cgcaacttacatggcatcattggca 122750
>gb|BT025327.1| Arabidopsis thaliana At3g10540 mRNA, complete cds Length = 1461 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tgatacatcgagatattaaaccgga 546 ||||||||||||||||||| ||||| Sbjct: 491 tgatacatcgagatattaagccgga 515
>gb|BC000189.1| Homo sapiens olfactomedin 1, transcript variant 3, mRNA (cDNA clone IMAGE:3351052), complete cds Length = 979 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 250 cgcagccgccggccggccagc 270
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 521 gtgatacatcgagatattaaaccggaaaa 549 ||||| ||||||||||| ||||||||||| Sbjct: 3540230 gtgattcatcgagatatcaaaccggaaaa 3540202
>gb|AC102032.9| Mus musculus chromosome 3, clone RP23-78J18, complete sequence Length = 194207 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 aatcccaggtggagcatcagc 299 ||||||||||||||||||||| Sbjct: 123631 aatcccaggtggagcatcagc 123651
>ref|NM_058199.2| Homo sapiens olfactomedin 1 (OLFM1), transcript variant 3, mRNA Length = 1077 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 348 cgcagccgccggccggccagc 368
>ref|NM_006334.2| Homo sapiens olfactomedin 1 (OLFM1), transcript variant 2, mRNA Length = 1106 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 348 cgcagccgccggccggccagc 368
>ref|NM_014279.2| Homo sapiens olfactomedin 1 (OLFM1), transcript variant 1, mRNA Length = 2838 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 348 cgcagccgccggccggccagc 368
>emb|X67288.1|PFCPK P.falciparum cpk gene Length = 2286 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 525 tacatcgagatattaaaccggaaaa 549 ||||||||||||||||||| ||||| Sbjct: 617 tacatcgagatattaaaccagaaaa 641
>gb|BC008763.2| Homo sapiens olfactomedin 1, transcript variant 1, mRNA (cDNA clone MGC:1341 IMAGE:3349741), complete cds Length = 2642 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 152 cgcagccgccggccggccagc 172
>emb|CR611553.1| full-length cDNA clone CS0DC016YD06 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1091 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 332 cgcagccgccggccggccagc 352
>gb|AF230361.1| Anabaena PCC7120 serine/threonine kinase (hstK), serine/threonine kinase (pknB), and sensor protein (msnA) genes, complete cds Length = 12320 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 gtgatacatcgagatattaaaccggaaaa 549 ||||| ||||||||||| ||||||||||| Sbjct: 8987 gtgattcatcgagatatcaaaccggaaaa 9015
>gb|AC011797.8| Homo sapiens, clone RP11-17L5, complete sequence Length = 158389 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 gggaaagcacttgggaggggc 193 ||||||||||||||||||||| Sbjct: 77502 gggaaagcacttgggaggggc 77482
>tpg|BK001427.1| TPA: TPA_exp: Homo sapiens NOELIN1 (OLFM1) gene, complete cds; alternatively spliced Length = 47757 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 1251 cgcagccgccggccggccagc 1271
>gb|BT023428.1| Arabidopsis thaliana At3g10540 gene, complete cds Length = 1926 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tgatacatcgagatattaaaccgga 546 ||||||||||||||||||| ||||| Sbjct: 690 tgatacatcgagatattaagccgga 714
>ref|XM_395732.2| PREDICTED: Apis mellifera similar to Serine/threonine protein kinase 6 (LOC412271), mRNA Length = 984 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 gtgatacatcgagatattaaaccggaaaa 549 ||||||||||| ||||||||||| ||||| Sbjct: 553 gtgatacatcgtgatattaaacctgaaaa 581
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 cgcaacttacattgcatcattggca 490 |||||||||||| |||||||||||| Sbjct: 4341216 cgcaacttacatggcatcattggca 4341240
>emb|BX822442.1|CNS0A64D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1801 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tgatacatcgagatattaaaccgga 546 ||||||||||||||||||| ||||| Sbjct: 583 tgatacatcgagatattaagccgga 607
>emb|BX823684.1|CNS0A5F2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS67ZB04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1896 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 522 tgatacatcgagatattaaaccgga 546 ||||||||||||||||||| ||||| Sbjct: 657 tgatacatcgagatattaagccgga 681
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 521 gtgatacatcgagatattaaaccggaaaa 549 ||||| ||||||||||| ||||||||||| Sbjct: 2718134 gtgattcatcgagatatcaaaccggaaaa 2718162
>gb|BC011741.2| Homo sapiens olfactomedin 1, transcript variant 1, mRNA (cDNA clone MGC:19671 IMAGE:3352603), complete cds Length = 2642 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 152 cgcagccgccggccggccagc 172
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 cgcaacttacattgcatcattggca 490 |||||||||||| |||||||||||| Sbjct: 4349910 cgcaacttacatggcatcattggca 4349934
>emb|AL159992.13| Human DNA sequence from clone RP11-166H7 on chromosome 9q34.13-34.3 Contains the 5' end of the OLFM1 gene for olfactomedin 1 and a CpG island, complete sequence Length = 73073 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 4831 cgcagccgccggccggccagc 4811
>dbj|D82343.1| Homo sapiens mRNA for AMY, complete cds Length = 1009 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 cgcagccgccggccggccagc 81 ||||||||||||||||||||| Sbjct: 251 cgcagccgccggccggccagc 271
>ref|XM_482665.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3033 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 atacatcgagatattaaacc 543 |||||||||||||||||||| Sbjct: 2509 atacatcgagatattaaacc 2528
>ref|XM_367127.1| Magnaporthe grisea 70-15 hypothetical protein (MG07052.4) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 tcttttcaagagccaactgaagca 279 ||||||||||||||||| |||||| Sbjct: 1051 tcttttcaagagccaacggaagca 1028
>gb|AC107206.4| Oryza sativa chromosome 3 BAC OSJNBa0063J18 genomic sequence, complete sequence Length = 154558 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aggaggagaagcggtgggtg 154 |||||||||||||||||||| Sbjct: 92197 aggaggagaagcggtgggtg 92216
>ref|XM_658006.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5494.2), mRNA Length = 1605 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 acatcgagatattaaaccggaaaa 549 |||||||||||| ||||||||||| Sbjct: 420 acatcgagatatcaaaccggaaaa 443
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aggaggagaagcggtgggtg 154 |||||||||||||||||||| Sbjct: 23255716 aggaggagaagcggtgggtg 23255735
>gb|AC158614.5| Mus musculus 10 BAC RP23-76C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223468 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 tagtcacattgtagctttga 251 |||||||||||||||||||| Sbjct: 22556 tagtcacattgtagctttga 22575
>emb|CT009669.5| Zebrafish DNA sequence from clone CH73-31I8 in linkage group 22, complete sequence Length = 91024 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 agtttggccatgtctacttg 214 |||||||||||||||||||| Sbjct: 59840 agtttggccatgtctacttg 59821
>emb|CR847854.12| Zebrafish DNA sequence from clone DKEY-229J6 in linkage group 8, complete sequence Length = 155365 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 aaaccttttagttggggtgc 566 |||||||||||||||||||| Sbjct: 81971 aaaccttttagttggggtgc 81952
>ref|XM_809639.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053506525.140) partial mRNA Length = 3114 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 acatcgagatattaaaccgg 545 |||||||||||||||||||| Sbjct: 1272 acatcgagatattaaaccgg 1291
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence Length = 211478 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 248 ttgaaagttcttttcaagag 267 |||||||||||||||||||| Sbjct: 167376 ttgaaagttcttttcaagag 167357
>ref|XM_815848.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053511283.130) partial mRNA Length = 3114 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 acatcgagatattaaaccgg 545 |||||||||||||||||||| Sbjct: 1272 acatcgagatattaaaccgg 1291
>gb|AY303755.1| Mus musculus myocardin A mRNA, complete cds Length = 5129 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 4702 gtgccctgatttatcttcac 4683
>ref|XM_962756.1| PREDICTED: Tribolium castaneum similar to CG6620-PA (LOC656213), mRNA Length = 933 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 cgagatattaaaccggaaaa 549 |||||||||||||||||||| Sbjct: 532 cgagatattaaaccggaaaa 551
>emb|AL669846.11| Mouse DNA sequence from clone RP23-298L23 on chromosome 11 Contains the Srfcp-pending gene for SRF co-factor protein, a novel gene (A730013G04) and a CpG island, complete sequence Length = 128747 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 6101 gtgccctgatttatcttcac 6120
>ref|NM_146386.1| Mus musculus myocardin (Myocd), transcript variant B, mRNA Length = 4960 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 4533 gtgccctgatttatcttcac 4514
>ref|NM_145136.2| Mus musculus myocardin (Myocd), transcript variant A, mRNA Length = 5129 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 4702 gtgccctgatttatcttcac 4683
>dbj|AK140668.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930080E20 product:myocardin, full insert sequence Length = 3960 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 2749 gtgccctgatttatcttcac 2730
>dbj|AK142216.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330013M13 product:myocardin, full insert sequence Length = 4974 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 4561 gtgccctgatttatcttcac 4542
>gb|AF384055.2|AF384055 Mus musculus transcription factor myocardin mRNA, complete cds Length = 4960 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 4533 gtgccctgatttatcttcac 4514
>emb|AL512583.11| Mouse DNA sequence from clone RP23-444H3 on chromosome 2, complete sequence Length = 181847 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 caaggagttgcagagatgca 443 |||||||||||||||||||| Sbjct: 11209 caaggagttgcagagatgca 11228
>dbj|AK084700.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330032J22 product:hypothetical protein, full insert sequence Length = 3521 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 gtgccctgatttatcttcac 511 |||||||||||||||||||| Sbjct: 3306 gtgccctgatttatcttcac 3287
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 atacatcgagatattaaacc 543 |||||||||||||||||||| Sbjct: 21760405 atacatcgagatattaaacc 21760386
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 aggaggagaagcggtgggtg 154 |||||||||||||||||||| Sbjct: 23248744 aggaggagaagcggtgggtg 23248763
>dbj|AP006505.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-266A3, complete sequence Length = 199759 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 ggccagagagaagaggagta 233 |||||||||||||||||||| Sbjct: 63067 ggccagagagaagaggagta 63086
>gb|AC084570.1|CBRG39C06 Caenorhabditis briggsae cosmid G39C06, complete sequence Length = 46996 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 aaccggaaaaccttttagtt 559 |||||||||||||||||||| Sbjct: 24671 aaccggaaaaccttttagtt 24652
>gb|AC083798.14| Homo sapiens 3q BAC RP11-299J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 145605 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 atcttggaacatgctgcaaa 411 |||||||||||||||||||| Sbjct: 101947 atcttggaacatgctgcaaa 101966
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gccggccggccagccatggc 87 |||||||||||||||||||| Sbjct: 78441 gccggccggccagccatggc 78422
>emb|BX294183.17| Mouse DNA sequence from clone RP24-388B10 on chromosome X, complete sequence Length = 184943 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 gatgttgggaaagcacttgg 186 |||||||||||||||||||| Sbjct: 35673 gatgttgggaaagcacttgg 35654
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 atacatcgagatattaaacc 543 |||||||||||||||||||| Sbjct: 39988 atacatcgagatattaaacc 39969
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0479C12 Length = 136799 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 atacatcgagatattaaacc 543 |||||||||||||||||||| Sbjct: 127975 atacatcgagatattaaacc 127956
>emb|BX649245.16| Zebrafish DNA sequence from clone CH211-213C4 in linkage group 22, complete sequence Length = 201091 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 agtttggccatgtctacttg 214 |||||||||||||||||||| Sbjct: 120588 agtttggccatgtctacttg 120607
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cgcagccgccggccggccag 80 |||||||||||||||||||| Sbjct: 857971 cgcagccgccggccggccag 857952
>emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chromosome 2, complete sequence Length = 133534 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gagatccagagtcaccttag 333 |||||||||||||||||||| Sbjct: 89147 gagatccagagtcaccttag 89128
>gb|AC163697.3| Gallus gallus BAC clone CH261-186A14 from chromosome unknown, complete sequence Length = 224517 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 agagctctacaaggagttgcagag 438 ||||||||||||||||||| |||| Sbjct: 155843 agagctctacaaggagttggagag 155820
>emb|AL731876.3|CNS08C8G Oryza sativa chromosome 12, . BAC OJ1194_E11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 119388 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 gccggccggccagccatggc 87 |||||||||||||||||||| Sbjct: 105550 gccggccggccagccatggc 105569
>emb|AL731655.8| Mouse DNA sequence from clone RP23-249G3 on chromosome 4, complete sequence Length = 126753 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 ggccagagagaagaggagta 233 |||||||||||||||||||| Sbjct: 54348 ggccagagagaagaggagta 54329 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,764,660 Number of Sequences: 3902068 Number of extensions: 4764660 Number of successful extensions: 94027 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93344 Number of HSP's gapped (non-prelim): 672 length of query: 586 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 563 effective length of database: 17,143,297,704 effective search space: 9651676607352 effective search space used: 9651676607352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)