ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21g09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
17SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) ... 50 4e-06
27SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Co... 48 2e-05
3ACDB2_METJA (Q57620) Acetyl-CoA decarbonylase/synthase complex b... 39 0.008
4LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related pro... 33 0.60
5ACDB1_METJA (Q57616) Acetyl-CoA decarbonylase/synthase complex b... 33 0.79
6LRP8_CHICK (Q98931) Low-density lipoprotein receptor-related pro... 31 2.3
7ACDB_METTH (O27745) Acetyl-CoA decarbonylase/synthase complex be... 30 5.1
8SP6_MOUSE (Q9ESX2) Transcription factor Sp6 (Krueppel-like facto... 29 8.7
9SP6_HUMAN (Q3SY56) Transcription factor Sp6 (Krueppel-like facto... 29 8.7

>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:|
           Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin
           2 low-kDa subunit]
          Length = 433

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
 Frame = +3

Query: 168 KPLPVLV-PVTKDPATLLYTIPFHYGNDLV-----VDTAGPLVWSTCQPGHLPAEFP--- 320
           KP+ +LV PV  D +T L+         L+     VD  G  +W  C+  +    +    
Sbjct: 36  KPINLLVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPF 95

Query: 321 CNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLVHTRLVANTTD 500
           C+S  C +AN      C  P   R G   +TC     NP+T     G+L    L  + T 
Sbjct: 96  CHSTQCSRANTHQCLSC--PAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQ 153

Query: 501 G----VHPVSQVSVRAIAACAPSSLL-KSLPR 581
           G    + P+  V  + + +CAPS LL K LPR
Sbjct: 154 GSTQQLGPLVTVP-QFLFSCAPSFLLQKGLPR 184



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>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic|
           7S globulin high-kDa subunit; Basic 7S globulin low-kDa
           subunit]
          Length = 427

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 13/147 (8%)
 Frame = +3

Query: 180 VLVPVTKDPATLLYTIPFHYGNDLV-----VDTAGPLVWSTCQPGHLPAEFP---CNSDT 335
           V++PV  D +T L+         L+     VD  G  +W  C+  +    +    C+S  
Sbjct: 34  VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93

Query: 336 CRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLVHTRLVANTTDG---- 503
           C +AN      C  P   R G   +TC     NP+T     G+L    L  + T G    
Sbjct: 94  CSRANTHQCLSC--PAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQ 151

Query: 504 VHPVSQVSVRAIAACAPSSLL-KSLPR 581
           + P+  V  + + +CAPS L+ K LPR
Sbjct: 152 LGPLVTVP-QFLFSCAPSFLVQKGLPR 177



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>ACDB2_METJA (Q57620) Acetyl-CoA decarbonylase/synthase complex beta subunit 2|
           (EC 2.3.1.-) (ACDS complex beta subunit 2) (ACDS complex
           acyltransferase 2)
          Length = 469

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 300 HLPAEFPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLV 470
           H   E PC S  C +A  F++P     G    G KG T    P++ + G C+ G  V
Sbjct: 266 HSALEKPCTSCGCFEAIVFYIPEVDGFGIAHRGYKGETPMGIPFSTLAGQCSGGKQV 322



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>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
            (Apolipoprotein E receptor) (APOER) (CD91 antigen)
          Length = 4544

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 20/63 (31%), Positives = 21/63 (33%)
 Frame = +3

Query: 279  WSTCQPGHLPAEFPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAA 458
            W  C+ G   A  P    TCR    F  P C    C       STCT    N     C  
Sbjct: 4237 WEHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQVCAGYCANNSTCTVNQGNQPQCRCLP 4296

Query: 459  GDL 467
            G L
Sbjct: 4297 GFL 4299



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>ACDB1_METJA (Q57616) Acetyl-CoA decarbonylase/synthase complex beta subunit 1|
           (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex
           acyltransferase 1)
          Length = 748

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 318 PCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLV 470
           PC S  C +A  F++P     G      +G T    P++ + G C+ G  V
Sbjct: 565 PCTSCGCFEAIVFYIPEVDGFGVAHRNFRGETPFGLPFSTLAGQCSGGKQV 615



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>LRP8_CHICK (Q98931) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2) (LR8B protein)
          Length = 917

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = +3

Query: 255 VDTAGPLVWSTCQPGHLPAEFPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYP 428
           +D AG      C P   P EF C++ TC   N F   G +  G G D +K S  T  P
Sbjct: 140 IDEAG------CAPACSPDEFQCSNKTCISIN-FVCDGYNNCGDGSDEKKCSPLTCSP 190



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>ACDB_METTH (O27745) Acetyl-CoA decarbonylase/synthase complex beta subunit (EC|
           2.3.1.-) (ACDS complex beta subunit) (ACDS complex
           acyltransferase)
          Length = 460

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +3

Query: 315 FPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLV 470
           +P  S  C +A AF++P     G      +G T    P++ + G C+ G  V
Sbjct: 272 YPHTSCGCFEAVAFYIPELDGIGIVNRDFRGETPLGIPFSAMAGQCSGGKQV 323



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>SP6_MOUSE (Q9ESX2) Transcription factor Sp6 (Krueppel-like factor 14)|
           (Epiprofin)
          Length = 376

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 318 PCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAY 425
           PC  D  +K    H+  CH PGCG+   K S   A+
Sbjct: 242 PCGPDGGKKK---HLHNCHIPGCGKAYAKTSHLKAH 274



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>SP6_HUMAN (Q3SY56) Transcription factor Sp6 (Krueppel-like factor 14)|
          Length = 376

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 318 PCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAY 425
           PC  D  +K    H+  CH PGCG+   K S   A+
Sbjct: 242 PCGPDGGKKK---HLHNCHIPGCGKAYAKTSHLKAH 274


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,549,931
Number of Sequences: 219361
Number of extensions: 1122204
Number of successful extensions: 3547
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3542
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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