Clone Name | bart21g09 |
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Clone Library Name | barley_pub |
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 50.4 bits (119), Expect = 4e-06 Identities = 46/152 (30%), Positives = 66/152 (43%), Gaps = 14/152 (9%) Frame = +3 Query: 168 KPLPVLV-PVTKDPATLLYTIPFHYGNDLV-----VDTAGPLVWSTCQPGHLPAEFP--- 320 KP+ +LV PV D +T L+ L+ VD G +W C+ + + Sbjct: 36 KPINLLVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPF 95 Query: 321 CNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLVHTRLVANTTD 500 C+S C +AN C P R G +TC NP+T G+L L + T Sbjct: 96 CHSTQCSRANTHQCLSC--PAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAIHATQ 153 Query: 501 G----VHPVSQVSVRAIAACAPSSLL-KSLPR 581 G + P+ V + + +CAPS LL K LPR Sbjct: 154 GSTQQLGPLVTVP-QFLFSCAPSFLLQKGLPR 184
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 47.8 bits (112), Expect = 2e-05 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 13/147 (8%) Frame = +3 Query: 180 VLVPVTKDPATLLYTIPFHYGNDLV-----VDTAGPLVWSTCQPGHLPAEFP---CNSDT 335 V++PV D +T L+ L+ VD G +W C+ + + C+S Sbjct: 34 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93 Query: 336 CRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLVHTRLVANTTDG---- 503 C +AN C P R G +TC NP+T G+L L + T G Sbjct: 94 CSRANTHQCLSC--PAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQ 151 Query: 504 VHPVSQVSVRAIAACAPSSLL-KSLPR 581 + P+ V + + +CAPS L+ K LPR Sbjct: 152 LGPLVTVP-QFLFSCAPSFLVQKGLPR 177
>ACDB2_METJA (Q57620) Acetyl-CoA decarbonylase/synthase complex beta subunit 2| (EC 2.3.1.-) (ACDS complex beta subunit 2) (ACDS complex acyltransferase 2) Length = 469 Score = 39.3 bits (90), Expect = 0.008 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +3 Query: 300 HLPAEFPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLV 470 H E PC S C +A F++P G G KG T P++ + G C+ G V Sbjct: 266 HSALEKPCTSCGCFEAIVFYIPEVDGFGIAHRGYKGETPMGIPFSTLAGQCSGGKQV 322
>LRP1_HUMAN (Q07954) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen) Length = 4544 Score = 33.1 bits (74), Expect = 0.60 Identities = 20/63 (31%), Positives = 21/63 (33%) Frame = +3 Query: 279 WSTCQPGHLPAEFPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAA 458 W C+ G A P TCR F P C C STCT N C Sbjct: 4237 WEHCRNGGTCAASPSGMPTCRCPTGFTGPKCTQQVCAGYCANNSTCTVNQGNQPQCRCLP 4296 Query: 459 GDL 467 G L Sbjct: 4297 GFL 4299
>ACDB1_METJA (Q57616) Acetyl-CoA decarbonylase/synthase complex beta subunit 1| (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex acyltransferase 1) Length = 748 Score = 32.7 bits (73), Expect = 0.79 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +3 Query: 318 PCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLV 470 PC S C +A F++P G +G T P++ + G C+ G V Sbjct: 565 PCTSCGCFEAIVFYIPEVDGFGVAHRNFRGETPFGLPFSTLAGQCSGGKQV 615
>LRP8_CHICK (Q98931) Low-density lipoprotein receptor-related protein 8| precursor (Apolipoprotein E receptor 2) (LR8B protein) Length = 917 Score = 31.2 bits (69), Expect = 2.3 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +3 Query: 255 VDTAGPLVWSTCQPGHLPAEFPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYP 428 +D AG C P P EF C++ TC N F G + G G D +K S T P Sbjct: 140 IDEAG------CAPACSPDEFQCSNKTCISIN-FVCDGYNNCGDGSDEKKCSPLTCSP 190
>ACDB_METTH (O27745) Acetyl-CoA decarbonylase/synthase complex beta subunit (EC| 2.3.1.-) (ACDS complex beta subunit) (ACDS complex acyltransferase) Length = 460 Score = 30.0 bits (66), Expect = 5.1 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = +3 Query: 315 FPCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAYPYNPVTGACAAGDLV 470 +P S C +A AF++P G +G T P++ + G C+ G V Sbjct: 272 YPHTSCGCFEAVAFYIPELDGIGIVNRDFRGETPLGIPFSAMAGQCSGGKQV 323
>SP6_MOUSE (Q9ESX2) Transcription factor Sp6 (Krueppel-like factor 14)| (Epiprofin) Length = 376 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 318 PCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAY 425 PC D +K H+ CH PGCG+ K S A+ Sbjct: 242 PCGPDGGKKK---HLHNCHIPGCGKAYAKTSHLKAH 274
>SP6_HUMAN (Q3SY56) Transcription factor Sp6 (Krueppel-like factor 14)| Length = 376 Score = 29.3 bits (64), Expect = 8.7 Identities = 14/36 (38%), Positives = 18/36 (50%) Frame = +3 Query: 318 PCNSDTCRKANAFHVPGCHAPGCGRDGRKGSTCTAY 425 PC D +K H+ CH PGCG+ K S A+ Sbjct: 242 PCGPDGGKKK---HLHNCHIPGCGKAYAKTSHLKAH 274 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,549,931 Number of Sequences: 219361 Number of extensions: 1122204 Number of successful extensions: 3547 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3349 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3542 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)