ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart21g02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC096539.2| Homo sapiens chromosome 1 clone RP11-150L22, complete sequence Length = 183307 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 238 tcctccggctcccctcccaccgccgcccctgcc 270 |||||| |||||||||||||||| ||||||||| Sbjct: 148143 tcctccagctcccctcccaccgcagcccctgcc 148111
>emb|CR636440.2|CNS0EQ1Q Tetraodon nigroviridis full-length cDNA Length = 1186 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 384 gagcttgcccgcggggaagagg 405 |||||||||||||||||||||| Sbjct: 1108 gagcttgcccgcggggaagagg 1087
>gb|AC168019.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940127D9, complete sequence Length = 102832 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 216 gccgtcgccgtggacgagggcg 237 |||||||||||||||||||||| Sbjct: 74858 gccgtcgccgtggacgagggcg 74837
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ccggcccgggcgaggtccgcg 354 ||||||||||||||||||||| Sbjct: 5828977 ccggcccgggcgaggtccgcg 5828997
>gb|U36790.1|OCU36790 Oryctolagus cuniculus putative chloride channel mRNA, complete cds Length = 2344 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cccaccgccgcccctgccacc 273 ||||||||||||||||||||| Sbjct: 674 cccaccgccgcccctgccacc 654
>gb|U36789.1|OCU36789 Oryctolagus cuniculus putative chloride channel mRNA, complete cds Length = 2553 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 253 cccaccgccgcccctgccacc 273 ||||||||||||||||||||| Sbjct: 721 cccaccgccgcccctgccacc 701
>ref|NM_000164.2| Homo sapiens gastric inhibitory polypeptide receptor (GIPR), mRNA Length = 2024 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1401 ctccggcccgggcgaggtcc 1420
>gb|BC101673.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone MGC:126722 IMAGE:8069179), complete cds Length = 1540 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1388 ctccggcccgggcgaggtcc 1407
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 caccgtcacctctggtgggc 295 |||||||||||||||||||| Sbjct: 1785339 caccgtcacctctggtgggc 1785358
>ref|XM_522307.1| PREDICTED: Pan troglodytes similar to synArfGEF (LOC466907), mRNA Length = 5442 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 460 gcccagacaccgacgccgagcagaagcc 487 |||||| | ||||||||||||||||||| Sbjct: 1517 gcccagccgccgacgccgagcagaagcc 1544
>ref|XM_465613.1| Oryza sativa (japonica cultivar-group), mRNA Length = 285 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccacctccaccgtcacctct 288 |||||||||||||||||||| Sbjct: 175 ccacctccaccgtcacctct 156
>ref|XM_450548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2268 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gtgctccttctcttcctcct 85 |||||||||||||||||||| Sbjct: 2046 gtgctccttctcttcctcct 2027
>ref|NM_190668.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1359 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 1207 ccgccgcccctgccacctcc 1188
>ref|XM_426303.1| PREDICTED: Gallus gallus LOC428747 (LOC428747), mRNA Length = 3339 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 cggctcccctcccaccgccgcccc 266 ||||||||| |||||||||||||| Sbjct: 3030 cggctccccccccaccgccgcccc 3007
>gb|AC137150.11| Mus musculus chromosome 18, clone RP23-342A15, complete sequence Length = 213513 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 167026 ccgccgccactgccacctccaccg 167003
>gb|AY452788.1| uncultured foraminiferan clone McM5 SSU ribosomal RNA gene, partial sequence Length = 960 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccctcccaccgccgcccctg 268 |||||||||||||||||||| Sbjct: 276 ccctcccaccgccgcccctg 295
>gb|AC099597.6| Mus musculus chromosome 17, clone RP23-78K9, complete sequence Length = 272221 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctccttctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 13542 gctccttctcttcctcctgg 13523
>ref|XM_989990.1| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_910737.2| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_140310.8| PREDICTED: Mus musculus YTH domain containing 2 (Ythdc2), mRNA Length = 6276 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 86 ccgccgccactgccacctccaccg 63
>ref|XM_976894.1| PREDICTED: Mus musculus similar to PDZ domain containing 2 (LOC669751), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 846 accgccgcccctgccaccaccacc 823
>ref|XM_897627.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 5 (Pdzd2), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>ref|XM_920266.2| PREDICTED: Mus musculus PDZ domain containing 2, transcript variant 9 (Pdzd2), mRNA Length = 4071 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>gb|AC135292.2| Mus musculus BAC clone RP23-153N21 from chromosome 15, complete sequence Length = 206967 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 60792 accgccgcccctgccaccaccacc 60769
>emb|CT010484.7| Mouse DNA sequence from clone RP23-296N14 on chromosome 17, complete sequence Length = 212827 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 gctccttctcttcctcctgg 87 |||||||||||||||||||| Sbjct: 31097 gctccttctcttcctcctgg 31078
>ref|XM_743847.1| Aspergillus fumigatus Af293 guanyl-nucleotide exchange factor (Afu7g05700) partial mRNA Length = 6015 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 ccgtcgccgtgctccttctcttcc 81 |||||||||| ||||||||||||| Sbjct: 1388 ccgtcgccgtcctccttctcttcc 1365
>gb|AC126258.4| Mus musculus BAC clone RP23-325B8 from chromosome 14, complete sequence Length = 203304 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgctccttctcttcctcctg 86 |||||||||||||||||||| Sbjct: 79763 tgctccttctcttcctcctg 79782
>emb|AL109742.12|HSJ542O18 Human DNA sequence from clone RP4-542O18 on chromosome 1p32.3-34.1 Contains GSSs, complete sequence Length = 101453 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 ggaagagcccagggatgctg 423 |||||||||||||||||||| Sbjct: 60949 ggaagagcccagggatgctg 60968
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 gagctggaggcggtcgcggagccg 446 |||||||||||| ||||||||||| Sbjct: 78733 gagctggaggcgatcgcggagccg 78710
>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete sequence Length = 225212 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgctccttctcttcctcctg 86 |||||||||||||||||||| Sbjct: 156268 tgctccttctcttcctcctg 156287
>gb|AC113581.3| Tetraodon nigroviridis clone GSTNA-45F12, complete sequence Length = 115385 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcccctgccacctccaccgtcacc 285 ||||| |||||||||||||||||| Sbjct: 31364 gcccccgccacctccaccgtcacc 31341
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gcccctgccacctccaccgtcacc 285 ||||| |||||||||||||||||| Sbjct: 122778 gcccccgccacctccaccgtcacc 122755
>ref|XM_687275.1| PREDICTED: Danio rerio similar to ubiquitin specific protease 54 (LOC563912), mRNA Length = 4503 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tgctccttctcttcctcctg 86 |||||||||||||||||||| Sbjct: 2594 tgctccttctcttcctcctg 2575
>dbj|AK159017.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library, clone:K530033M09 product:PDZ domain containing 3, full insert sequence Length = 4071 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 accgccgcccctgccacctccacc 279 |||||||||||||||||| ||||| Sbjct: 229 accgccgcccctgccaccaccacc 206
>dbj|AK155473.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630230M04 product:hypothetical Alanine-rich region profile containing protein, full insert sequence Length = 1146 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 135 ccgccgccactgccacctccaccg 158
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 ggcgaggtccgcgaccatcc 361 |||||||||||||||||||| Sbjct: 5225038 ggcgaggtccgcgaccatcc 5225019
>gb|S79852.1| glucose-dependent insulinotropic polypeptide receptor [human, insulinoma cells, mRNA Partial, 1849 nt] Length = 1849 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1396 ctccggcccgggcgaggtcc 1415
>dbj|AK052308.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330025A21 product:hypothetical protein, full insert sequence Length = 1179 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 ccgccgcccctgccacctccaccg 280 |||||||| ||||||||||||||| Sbjct: 153 ccgccgccactgccacctccaccg 176
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 gctccttctcttcctcctggccgt 91 ||||||||||||||||| |||||| Sbjct: 5527954 gctccttctcttcctcccggccgt 5527931
>gb|BC095494.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone IMAGE:7002006), partial cds Length = 1399 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1300 ctccggcccgggcgaggtcc 1319
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgctccttctcttcctcct 85 |||||||||||||||||||| Sbjct: 9595088 gtgctccttctcttcctcct 9595107
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgctccttctcttcctcct 85 |||||||||||||||||||| Sbjct: 4327893 gtgctccttctcttcctcct 4327912
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccacctccaccgtcacctct 288 |||||||||||||||||||| Sbjct: 16353272 ccacctccaccgtcacctct 16353253
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 37006392 ccgccgcccctgccacctcc 37006373
>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human BAC Library) complete sequence Length = 160039 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 ggaagagcccagggatgctg 423 |||||||||||||||||||| Sbjct: 39991 ggaagagcccagggatgctg 39972
>gb|BC093723.1| Homo sapiens gastric inhibitory polypeptide receptor, mRNA (cDNA clone MGC:120758 IMAGE:7939568), complete cds Length = 1545 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1388 ctccggcccgggcgaggtcc 1407
>dbj|D49559.2| Homo sapiens gene for gastric inhibitory polypeptide receptor, complete cds Length = 13809 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 13698 ctccggcccgggcgaggtcc 13717
>gb|AC135050.3| Homo sapiens chromosome 16 clone RP11-196G11, complete sequence Length = 182230 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 tcccctcccaccgccgcccctgcc 270 |||||||||||| ||||||||||| Sbjct: 63951 tcccctcccaccaccgcccctgcc 63974
>gb|AY029313.1| Zea mays seven transmembrane protein Mlo2 mRNA, complete cds Length = 2030 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 catggcgaggaggaagcagc 511 |||||||||||||||||||| Sbjct: 1812 catggcgaggaggaagcagc 1793
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gtggacgagggcgtcctccggctc 248 |||||||||||| ||||||||||| Sbjct: 2286463 gtggacgagggcatcctccggctc 2286440
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 96696 ccgccgcccctgccacctcc 96677
>dbj|AP003289.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683F02 Length = 153388 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 ccgccgcccctgccacctcc 276 |||||||||||||||||||| Sbjct: 7533 ccgccgcccctgccacctcc 7514
>dbj|AP004870.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419C03 Length = 146929 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ccacctccaccgtcacctct 288 |||||||||||||||||||| Sbjct: 38938 ccacctccaccgtcacctct 38919
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgctccttctcttcctcct 85 |||||||||||||||||||| Sbjct: 19473 gtgctccttctcttcctcct 19492
>emb|AJ307768.1|NSP307768 Nemogullmia sp. A330 partial 18S rRNA gene, isolate A330 Length = 1097 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 ccctcccaccgccgcccctg 268 |||||||||||||||||||| Sbjct: 275 ccctcccaccgccgcccctg 294
>emb|BX649277.5| Zebrafish DNA sequence from clone DKEYP-67A10 in linkage group 20, complete sequence Length = 125366 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgctccttctcttcctcctg 86 |||||||||||||||||||| Sbjct: 78747 tgctccttctcttcctcctg 78766
>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0706E03 Length = 188028 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gtgctccttctcttcctcct 85 |||||||||||||||||||| Sbjct: 35185 gtgctccttctcttcctcct 35204
>emb|BX640400.4| Mouse DNA sequence from clone RP23-294N21 on chromosome 4, complete sequence Length = 83148 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tgctccttctcttcctcctg 86 |||||||||||||||||||| Sbjct: 67316 tgctccttctcttcctcctg 67297
>dbj|AK120685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164N07, full insert sequence Length = 3527 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gtgctccttctcttcctcct 85 |||||||||||||||||||| Sbjct: 2173 gtgctccttctcttcctcct 2154
>gb|AY105309.1| Zea mays PCO148749 mRNA sequence Length = 2013 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 catggcgaggaggaagcagc 511 |||||||||||||||||||| Sbjct: 1812 catggcgaggaggaagcagc 1793
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 337 gcccgggcgaggtccgcgac 356 |||||||||||||||||||| Sbjct: 171853 gcccgggcgaggtccgcgac 171834
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1765 ctccggcccgggcgaggtcc 1784
>gb|AC006132.1|AC006132 Homo sapiens chromosome 19, cosmid R28204, complete sequence Length = 41572 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 41182 ctccggcccgggcgaggtcc 41201
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 367 tcgacgtcgtgcccaccgag 386 |||||||||||||||||||| Sbjct: 1907369 tcgacgtcgtgcccaccgag 1907350
>emb|BX897719.9| Zebrafish DNA sequence from clone CH211-199I23 in linkage group 13, complete sequence Length = 216407 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 tgctccttctcttcctcctg 86 |||||||||||||||||||| Sbjct: 197541 tgctccttctcttcctcctg 197560
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 agctggaggcggtcgcggag 443 |||||||||||||||||||| Sbjct: 2973418 agctggaggcggtcgcggag 2973399
>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence Length = 203369 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gggaagaggaagagcccagg 416 |||||||||||||||||||| Sbjct: 44634 gggaagaggaagagcccagg 44653
>gb|U39231.1|HSU39231 Human GIP receptor (GIPR) mRNA, complete cds Length = 2025 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1401 ctccggcccgggcgaggtcc 1420
>emb|AL606824.13| Mouse DNA sequence from clone RP23-9G13 on chromosome 11, complete sequence Length = 247743 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 ggaagaggaagagcccaggg 417 |||||||||||||||||||| Sbjct: 109506 ggaagaggaagagcccaggg 109525
>emb|X81832.1|HSGDIPR H.sapiens mRNA for glucose-dependant insulinotropic polypeptide receptor gene Length = 2181 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ctccggcccgggcgaggtcc 351 |||||||||||||||||||| Sbjct: 1863 ctccggcccgggcgaggtcc 1882 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,149,049 Number of Sequences: 3902068 Number of extensions: 4149049 Number of successful extensions: 107185 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106087 Number of HSP's gapped (non-prelim): 1098 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
