>MUC13_RAT (P97881) Mucin-13 precursor|
          Length = 547

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = -3

Query: 494 TTCPMPASFPSRTA*SPCGTIRIMPPWCWPAEMSSTVPLIVQLGTAAPSETEEDLTKPPG 315
           T  P   S P+ TA  P  T    P    P   +S+    V   T + S+T    T+PPG
Sbjct: 110 TQLPSSTSTPTTTATQPTSTASQTPGTTQPPGGASSPTTTVTQPTGSSSQTP-GTTQPPG 168

Query: 314 GAVSKSPLMSRP 279
           GA + +  +++P
Sbjct: 169 GASTPTTTVTQP 180



 Score = 29.3 bits (64), Expect = 8.5
 Identities = 22/72 (30%), Positives = 31/72 (43%)
 Frame = -3

Query: 494 TTCPMPASFPSRTA*SPCGTIRIMPPWCWPAEMSSTVPLIVQLGTAAPSETEEDLTKPPG 315
           T  P   S P+ TA  P  T    P        +ST        T+  S+T    T+PPG
Sbjct: 83  TQLPGTTSTPTTTATQPTSTSFQTPGTTQLPSSTSTPTTTATQPTSTASQTP-GTTQPPG 141

Query: 314 GAVSKSPLMSRP 279
           GA S +  +++P
Sbjct: 142 GASSPTTTVTQP 153

>WFDC2_MOUSE (Q9DAU7) WAP four-disulfide core domain protein 2 precursor (WAP|
           domain protein HE4)
          Length = 174

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -3

Query: 443 CGTIRIMPPWCWPAEMSSTVPLIVQLGTAAPSETEEDLTKPPGGAVSKSP 294
           C ++   P      E+S T   + + GT   S   +  TKPPGG VS  P
Sbjct: 66  CSSVCSKPNGPSEGELSGTDTKLSETGTTTQSAGLDHTTKPPGGQVSTKP 115

>CSMD2_HUMAN (Q7Z408) CUB and sushi domain-containing protein 2 (CUB and sushi|
            multiple domains protein 2)
          Length = 3487

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = +1

Query: 436  VPQGDHAVRLGNDAGIGQVVQVEKGSEYAITFSAARTC----AQLESLNISA 579
            VP+  +  RLG+D  +G +V+ E  S YA+  S    C      L   N+SA
Sbjct: 1738 VPEPRYGKRLGSDFSVGAIVRFECNSGYALQGSPEIECLPVPGALAQWNVSA 1789

>TDRD5_HUMAN (Q8NAT2) Tudor domain-containing protein 5|
          Length = 682

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -3

Query: 395 SSTVPLIVQLGTAAPSETE--EDLTKPPGGAVSKSP 294
           S T P  +QL TAAP  T   +D  + P G+V  SP
Sbjct: 570 SQTQPKQIQLSTAAPCSTTAVDDSAEKPSGSVESSP 605

>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1|
          Length = 364

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 35/152 (23%), Positives = 47/152 (30%), Gaps = 11/152 (7%)
 Frame = -3

Query: 539 AALNVIAYSE-PFSTCTTCPMPASFPSRTA*S-------PCGTIR---IMPPWCWPAEMS 393
           AAL+ +A  + P    T  P+P   PS ++ S       P G      + PP        
Sbjct: 23  AALHSMAEMKTPLYPATYPPLPTGPPSSSSSSSSSSPSPPLGAHNPGGLKPPAAGGLSSL 82

Query: 392 STVPLIVQLGTAAPSETEEDLTKPPGGAVSKSPLMSRPXXXXXXXXXXXXXXXXXXXXXX 213
           S+ P   QL  A P    + L++P     S + L S                        
Sbjct: 83  SSPPQ--QLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASATSASAAAA 140

Query: 212 XXXXXXXXXXXSDWQLAPSAPRLPHQSPPPYP 117
                      S   L    PR    SPPP P
Sbjct: 141 AAAAAAAAAASSPAGLLAGLPRFSSLSPPPPP 172

>FWDC_METJA (Q58571) Tungsten-containing formylmethanofuran dehydrogenase 2|
           subunit C (EC 1.2.99.5) (Tungsten-containing
           formylmethanofuran dehydrogenase II subunit C)
          Length = 273

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 397 ISAGQHQGGMILIVPQGDHAVRLGNDAGIGQVVQVEKGSEYAITF 531
           I AG HQ G I+I+  GD  VR+G +   G +V   K  E   +F
Sbjct: 177 IMAGIHQNGGIIII-DGDVDVRVGGEMKAGAIVVYGKVEEILPSF 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.132    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,759,674
Number of Sequences: 219361
Number of extensions: 1344850
Number of successful extensions: 4195
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4194
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4929664480
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)