ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart21f12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_191286.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1200 Score = 287 bits (145), Expect = 2e-74 Identities = 317/373 (84%), Gaps = 6/373 (1%) Strand = Plus / Plus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 23 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 79 Query: 257 cctcggccgctccggtggaggacggcctgctcatcaatggtgatttcgagacagcaccgc 316 ||||||||||| |||||||||| ||| |||||| ||||||||| || ||||||||||| Sbjct: 80 cctcggccgctgcggtggaggatggcttgctcagcaatggtgactttgagacagcaccag 139 Query: 317 ctggtggtttcgtcaaatcttcttctgtttcggagggcgcagc---ggtcccaagctgga 373 |||||||||| ||||||||| |||| ||| | || || ||| | | |||| |||||| Sbjct: 140 ctggtggttttgtcaaatctgcttcagttgctgaaggtgcatcatcgatccctggctgga 199 Query: 374 cgatcaatggaacagttgagctcatttccgcaggccagcaccagggtggcatgatcctta 433 |||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 200 cgatcaatgggacagtcgagctcatctcagcaggccagcaccagggtggcatgattctta 259 Query: 434 ttgttccacaaggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtgg 493 |||||||||| ||||||||||| ||||| || || || || ||| | || |||||||||| Sbjct: 260 ttgttccacagggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtgg 319 Query: 494 tgcaggttgagaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgc 553 ||||||||||||||||||| ||||| || ||||| |||||||| ||||| || || || | Sbjct: 320 tgcaggttgagaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcac 379 Query: 554 agctggagtcact 566 |||| |||||||| Sbjct: 380 agctagagtcact 392
>dbj|AK102373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091N05, full insert sequence Length = 1630 Score = 287 bits (145), Expect = 2e-74 Identities = 317/373 (84%), Gaps = 6/373 (1%) Strand = Plus / Plus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 168 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 224 Query: 257 cctcggccgctccggtggaggacggcctgctcatcaatggtgatttcgagacagcaccgc 316 ||||||||||| |||||||||| ||| |||||| ||||||||| || ||||||||||| Sbjct: 225 cctcggccgctgcggtggaggatggcttgctcagcaatggtgactttgagacagcaccag 284 Query: 317 ctggtggtttcgtcaaatcttcttctgtttcggagggcgcagc---ggtcccaagctgga 373 |||||||||| ||||||||| |||| ||| | || || ||| | | |||| |||||| Sbjct: 285 ctggtggttttgtcaaatctgcttcagttgctgaaggtgcatcatcgatccctggctgga 344 Query: 374 cgatcaatggaacagttgagctcatttccgcaggccagcaccagggtggcatgatcctta 433 |||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 345 cgatcaatgggacagtcgagctcatctcagcaggccagcaccagggtggcatgattctta 404 Query: 434 ttgttccacaaggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtgg 493 |||||||||| ||||||||||| ||||| || || || || ||| | || |||||||||| Sbjct: 405 ttgttccacagggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtgg 464 Query: 494 tgcaggttgagaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgc 553 ||||||||||||||||||| ||||| || ||||| |||||||| ||||| || || || | Sbjct: 465 tgcaggttgagaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcac 524 Query: 554 agctggagtcact 566 |||| |||||||| Sbjct: 525 agctagagtcact 537
>dbj|AK060989.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C09, full insert sequence Length = 1626 Score = 287 bits (145), Expect = 2e-74 Identities = 317/373 (84%), Gaps = 6/373 (1%) Strand = Plus / Plus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 169 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 225 Query: 257 cctcggccgctccggtggaggacggcctgctcatcaatggtgatttcgagacagcaccgc 316 ||||||||||| |||||||||| ||| |||||| ||||||||| || ||||||||||| Sbjct: 226 cctcggccgctgcggtggaggatggcttgctcagcaatggtgactttgagacagcaccag 285 Query: 317 ctggtggtttcgtcaaatcttcttctgtttcggagggcgcagc---ggtcccaagctgga 373 |||||||||| ||||||||| |||| ||| | || || ||| | | |||| |||||| Sbjct: 286 ctggtggttttgtcaaatctgcttcagttgctgaaggtgcatcatcgatccctggctgga 345 Query: 374 cgatcaatggaacagttgagctcatttccgcaggccagcaccagggtggcatgatcctta 433 |||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 346 cgatcaatgggacagtcgagctcatctcagcaggccagcaccagggtggcatgattctta 405 Query: 434 ttgttccacaaggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtgg 493 |||||||||| ||||||||||| ||||| || || || || ||| | || |||||||||| Sbjct: 406 ttgttccacagggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtgg 465 Query: 494 tgcaggttgagaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgc 553 ||||||||||||||||||| ||||| || ||||| |||||||| ||||| || || || | Sbjct: 466 tgcaggttgagaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcac 525 Query: 554 agctggagtcact 566 |||| |||||||| Sbjct: 526 agctagagtcact 538
>gb|AY108251.1| Zea mays PCO077043 mRNA sequence Length = 1664 Score = 252 bits (127), Expect = 1e-63 Identities = 276/325 (84%), Gaps = 3/325 (0%) Strand = Plus / Plus Query: 249 ccgcctggcctcggccgctccggtggaggacggcctgctcatcaatggtgatttcgagac 308 ||||| ||||||||| |||||||||||||| |||||||||| ||||||||| || ||||| Sbjct: 304 ccgcccggcctcggcggctccggtggaggatggcctgctcagcaatggtgactttgagac 363 Query: 309 agcaccgcctggtggtttcgtcaaatcttcttctgtttcggagggcgcagcgg---tccc 365 |||||| ||||||||| || |||||| |||||||| | ||||| ||| || |||| Sbjct: 364 agcaccaagtggtggttttgtaaaatctgcttctgttgctgagggtgcatcgtcaatccc 423 Query: 366 aagctggacgatcaatggaacagttgagctcatttccgcaggccagcaccagggtggcat 425 | ||||||||||| || || ||||| |||||||| |||||||| |||||||||||||| Sbjct: 424 tggttggacgatcaacggcacggttgaactcatttcagcaggccaacaccagggtggcat 483 Query: 426 gatccttattgttccacaaggggatcatgccgtacggctagggaatgatgcaggcattgg 485 |||||| ||||||||||| ||||| ||||| ||| |||||||||||||||| || |||| Sbjct: 484 gatcctgattgttccacagggggaccatgcagtaaggctagggaatgatgctagcgttgg 543 Query: 486 gcaggtggtgcaggttgagaagggctccgagtacgcgatcacattcagtgccgcccggac 545 |||||||||| | ||||||||||| || ||||| || |||||||||||||| |||||||| Sbjct: 544 gcaggtggtggacgttgagaagggttcggagtatgctatcacattcagtgctgcccggac 603 Query: 546 ctgcgcgcagctggagtcactgaat 570 || || || |||||| |||||||| Sbjct: 604 atgtgcacaactggaggcactgaat 628
>gb|AY596543.1| Saccharum officinarum clone SCCCCL4007B07, complete sequence Length = 1774 Score = 248 bits (125), Expect = 2e-62 Identities = 271/319 (84%), Gaps = 3/319 (0%) Strand = Plus / Plus Query: 255 ggcctcggccgctccggtggaggacggcctgctcatcaatggtgatttcgagacagcacc 314 ||||||||| |||||||||||||| |||||||||| ||||||||| || ||||||||||| Sbjct: 358 ggcctcggcggctccggtggaggatggcctgctcagcaatggtgactttgagacagcacc 417 Query: 315 gcctggtggtttcgtcaaatcttcttctgtttcggagggcgcagcgg---tcccaagctg 371 |||||||| || |||||| | |||||| | ||||| ||| || |||| | || Sbjct: 418 agtcggtggttttgtaaaatctgcgtctgttgctgagggtgcatcgtcaatccctggttg 477 Query: 372 gacgatcaatggaacagttgagctcatttccgcaggccagcaccagggtggcatgatcct 431 |||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 478 gacgatcaatggcacggttgagctcatttcagcaggccagcaccagggtggcatgatcct 537 Query: 432 tattgttccacaaggggatcatgccgtacggctagggaatgatgcaggcattgggcaggt 491 ||||||||||| ||||| ||||| ||| |||||||||||||||| || |||||||||| Sbjct: 538 gattgttccacagggggaccatgctgtaaggctagggaatgatgctagcgttgggcaggt 597 Query: 492 ggtgcaggttgagaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgc 551 |||| | |||||||||||||| ||||| || ||||||||||| || ||||| || || || Sbjct: 598 ggtggacgttgagaagggctcagagtatgctatcacattcagcgctgcccgaacatgtgc 657 Query: 552 gcagctggagtcactgaat 570 || |||||| |||||||| Sbjct: 658 acaactggaggcactgaat 676
>ref|NM_193187.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1017 Score = 210 bits (106), Expect = 4e-51 Identities = 215/250 (86%), Gaps = 6/250 (2%) Strand = Plus / Plus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 23 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 79 Query: 257 cctcggccgctccggtggaggacggcctgctcatcaatggtgatttcgagacagcaccgc 316 ||||||||||| |||||||||| ||| |||||| ||||||||| || ||||||||||| Sbjct: 80 cctcggccgctgcggtggaggatggcttgctcagcaatggtgactttgagacagcaccag 139 Query: 317 ctggtggtttcgtcaaatcttcttctgtttcggagggcg---cagcggtcccaagctgga 373 |||||||||| ||||||||| |||| ||| | ||||| | || || |||| |||||| Sbjct: 140 ctggtggttttgtcaaatctgcttcagttgctgagggtgcatcatcgatccctggctgga 199 Query: 374 cgatcaatggaacagttgagctcatttccgcaggccagcaccagggtggcatgatcctta 433 |||||||||| ||||| |||||||| || |||||||||||||||||||||||||| |||| Sbjct: 200 cgatcaatgggacagtcgagctcatctcagcaggccagcaccagggtggcatgattctta 259 Query: 434 ttgttccaca 443 |||||||||| Sbjct: 260 ttgttccaca 269
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 137 bits (69), Expect = 5e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Minus Query: 284 tgctcatcaatggtgatttcgagacagcaccgcctggtggtttcgtcaaatcttcttctg 343 |||||| ||||||||| || ||||||||||| |||||||||| ||||||||| |||| | Sbjct: 19127698 tgctcagcaatggtgactttgagacagcaccagctggtggttttgtcaaatctgcttcag 19127639 Query: 344 tttcggagggcgcagc---ggtcccaagctggacgatcaatggaacagttgagctcattt 400 || | ||||| ||| | | |||| |||||||||||||||| ||||| |||||||| | Sbjct: 19127638 ttgctgagggtgcatcatcgatccctggctggacgatcaatgggacagtcgagctcatct 19127579 Query: 401 ccgcaggccagcaccagggtggcatgatccttattgttccaca 443 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 19127578 cagcaggccagcaccagggtggcatgattcttattgttccaca 19127536 Score = 129 bits (65), Expect = 1e-26 Identities = 139/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 284 tgctcatcaatggtgatttcgagacagcaccgcctggtggtttcgtcaaatcttcttctg 343 |||||| ||||||||| || ||||||||||| |||||||||| ||||||||| |||| | Sbjct: 31745023 tgctcagcaatggtgactttgagacagcaccagctggtggttttgtcaaatctgcttcag 31745082 Query: 344 tttcggagggcgcagc---ggtcccaagctggacgatcaatggaacagttgagctcattt 400 || | || || ||| | | |||| |||||||||||||||| ||||| |||||||| | Sbjct: 31745083 ttgctgaaggtgcatcatcgatccctggctggacgatcaatgggacagtcgagctcatct 31745142 Query: 401 ccgcaggccagcaccagggtggcatgatccttattgttccaca 443 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 31745143 cagcaggccagcaccagggtggcatgattcttattgttccaca 31745185 Score = 93.7 bits (47), Expect = 6e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 444 aggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtggtgcaggttga 503 |||||||||||| ||||| || || || || ||| | || |||||||||||||||||||| Sbjct: 31745282 aggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtggtgcaggttga 31745341 Query: 504 gaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgcagctggagtc 563 ||||||||| ||||| || ||||| |||||||| ||||| || || || ||||| ||||| Sbjct: 31745342 gaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcacagctagagtc 31745401 Query: 564 act 566 ||| Sbjct: 31745402 act 31745404 Score = 93.7 bits (47), Expect = 6e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 444 aggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtggtgcaggttga 503 |||||||||||| ||||| || || || |||||| | || |||||||||||||||||||| Sbjct: 19127439 aggggatcatgctgtacgtcttggaaacgatgcaagtatagggcaggtggtgcaggttga 19127380 Query: 504 gaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgcagctggagtc 563 ||||||||| ||||| || ||||| |||||||| ||| | || || || ||||| ||||| Sbjct: 19127379 gaagggctcagagtatgctatcacgttcagtgctgcctgaacgtgtgcacagctagagtc 19127320 Query: 564 act 566 ||| Sbjct: 19127319 act 19127317 Score = 79.8 bits (40), Expect = 9e-12 Identities = 72/82 (87%), Gaps = 3/82 (3%) Strand = Plus / Plus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 31742718 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 31742774 Query: 257 cctcggccgctccggtggagga 278 ||||||||||| |||||||||| Sbjct: 31742775 cctcggccgctgcggtggagga 31742796 Score = 79.8 bits (40), Expect = 9e-12 Identities = 72/82 (87%), Gaps = 3/82 (3%) Strand = Plus / Minus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 19129971 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 19129915 Query: 257 cctcggccgctccggtggagga 278 ||||||||||| |||||||||| Sbjct: 19129914 cctcggccgctgcggtggagga 19129893
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 137 bits (69), Expect = 5e-29 Identities = 140/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Minus Query: 284 tgctcatcaatggtgatttcgagacagcaccgcctggtggtttcgtcaaatcttcttctg 343 |||||| ||||||||| || ||||||||||| |||||||||| ||||||||| |||| | Sbjct: 93115 tgctcagcaatggtgactttgagacagcaccagctggtggttttgtcaaatctgcttcag 93056 Query: 344 tttcggagggcgcagc---ggtcccaagctggacgatcaatggaacagttgagctcattt 400 || | ||||| ||| | | |||| |||||||||||||||| ||||| |||||||| | Sbjct: 93055 ttgctgagggtgcatcatcgatccctggctggacgatcaatgggacagtcgagctcatct 92996 Query: 401 ccgcaggccagcaccagggtggcatgatccttattgttccaca 443 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 92995 cagcaggccagcaccagggtggcatgattcttattgttccaca 92953 Score = 93.7 bits (47), Expect = 6e-16 Identities = 104/123 (84%) Strand = Plus / Minus Query: 444 aggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtggtgcaggttga 503 |||||||||||| ||||| || || || |||||| | || |||||||||||||||||||| Sbjct: 92856 aggggatcatgctgtacgtcttggaaacgatgcaagtatagggcaggtggtgcaggttga 92797 Query: 504 gaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgcagctggagtc 563 ||||||||| ||||| || ||||| |||||||| ||| | || || || ||||| ||||| Sbjct: 92796 gaagggctcagagtatgctatcacgttcagtgctgcctgaacgtgtgcacagctagagtc 92737 Query: 564 act 566 ||| Sbjct: 92736 act 92734 Score = 79.8 bits (40), Expect = 9e-12 Identities = 72/82 (87%), Gaps = 3/82 (3%) Strand = Plus / Minus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 95388 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 95332 Query: 257 cctcggccgctccggtggagga 278 ||||||||||| |||||||||| Sbjct: 95331 cctcggccgctgcggtggagga 95310
>dbj|AP003375.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1414_E05 Length = 105222 Score = 129 bits (65), Expect = 1e-26 Identities = 139/163 (85%), Gaps = 3/163 (1%) Strand = Plus / Plus Query: 284 tgctcatcaatggtgatttcgagacagcaccgcctggtggtttcgtcaaatcttcttctg 343 |||||| ||||||||| || ||||||||||| |||||||||| ||||||||| |||| | Sbjct: 23061 tgctcagcaatggtgactttgagacagcaccagctggtggttttgtcaaatctgcttcag 23120 Query: 344 tttcggagggcgcagc---ggtcccaagctggacgatcaatggaacagttgagctcattt 400 || | || || ||| | | |||| |||||||||||||||| ||||| |||||||| | Sbjct: 23121 ttgctgaaggtgcatcatcgatccctggctggacgatcaatgggacagtcgagctcatct 23180 Query: 401 ccgcaggccagcaccagggtggcatgatccttattgttccaca 443 | |||||||||||||||||||||||||| |||||||||||||| Sbjct: 23181 cagcaggccagcaccagggtggcatgattcttattgttccaca 23223 Score = 93.7 bits (47), Expect = 6e-16 Identities = 104/123 (84%) Strand = Plus / Plus Query: 444 aggggatcatgccgtacggctagggaatgatgcaggcattgggcaggtggtgcaggttga 503 |||||||||||| ||||| || || || || ||| | || |||||||||||||||||||| Sbjct: 23320 aggggatcatgctgtacgtcttggaaacgacgcaagtatagggcaggtggtgcaggttga 23379 Query: 504 gaagggctccgagtacgcgatcacattcagtgccgcccggacctgcgcgcagctggagtc 563 ||||||||| ||||| || ||||| |||||||| ||||| || || || ||||| ||||| Sbjct: 23380 gaagggctcagagtatgctatcacgttcagtgctgcccgaacgtgtgcacagctagagtc 23439 Query: 564 act 566 ||| Sbjct: 23440 act 23442 Score = 79.8 bits (40), Expect = 9e-12 Identities = 72/82 (87%), Gaps = 3/82 (3%) Strand = Plus / Plus Query: 197 ggctcgcattgctggggctggggctggcgctgcttctgctggcgccctctcgccgcctgg 256 |||||||||||||||||||| | |||| |||||||||||||||||||| || |||| Sbjct: 20756 ggctcgcattgctggggctgtgcctgggcctgcttctgctggcgccctc---ccatctgg 20812 Query: 257 cctcggccgctccggtggagga 278 ||||||||||| |||||||||| Sbjct: 20813 cctcggccgctgcggtggagga 20834
>gb|AC108944.4| Mus musculus BAC clone RP23-114I22 from chromosome 9, complete sequence Length = 198019 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 70 cctcactcccactcccacccccca 93 |||||||||||||||||||||||| Sbjct: 31839 cctcactcccactcccacccccca 31816
>gb|BC083830.1| Rattus norvegicus receptor accessory protein 6, mRNA (cDNA clone MGC:94922 IMAGE:7112359), complete cds Length = 2152 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgc 229 |||||||||||||||||||||||| Sbjct: 1388 tgctggggctggggctggcgctgc 1365
>gb|AC132267.3| Mus musculus BAC clone RP24-393E11 from chromosome 9, complete sequence Length = 151285 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 70 cctcactcccactcccacccccca 93 |||||||||||||||||||||||| Sbjct: 131155 cctcactcccactcccacccccca 131132
>ref|NM_001013218.1| Rattus norvegicus receptor accessory protein 6 (Reep6), mRNA Length = 2152 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgc 229 |||||||||||||||||||||||| Sbjct: 1388 tgctggggctggggctggcgctgc 1365
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 472 gatgcaggcattgggcaggtggt 494 ||||||||||||||||||||||| Sbjct: 4420587 gatgcaggcattgggcaggtggt 4420609
>gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence Length = 226331 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 147427 tgctggggctggggctggcgctg 147449 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 91117 gctggggctggggctggcgctg 91138
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 472 gatgcaggcattgggcaggtggt 494 ||||||||||||||||||||||| Sbjct: 4427244 gatgcaggcattgggcaggtggt 4427266
>gb|AC093571.13| Pan troglodytes clone rp43-118h18, complete sequence Length = 164807 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 24757 tgctggggctggggctggcgctg 24779
>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence Length = 204007 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 37248 tgctggggctggggctggcgctg 37226
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 213 gctggggctggcgctgcttctgctggc 239 |||||||||||||||| |||||||||| Sbjct: 1155382 gctggggctggcgctgattctgctggc 1155408
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 200 tcgcattgctggggctggggctg 222 ||||||||||||||||||||||| Sbjct: 1982712 tcgcattgctggggctggggctg 1982690
>gb|AC012331.9| Homo sapiens chromosome 22 clone b41c4 map 22q11, complete sequence Length = 143376 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 65896 tgctggggctggggctggcgctg 65874
>gb|AC000051.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 31f3 In IGLC Region, complete sequence Length = 35687 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 26077 tgctggggctggggctggcgctg 26099
>gb|AC002308.1| Homo sapiens Chromosome 22q11.2 BAC Clone 1000e4 In IGLC Region, complete sequence Length = 151111 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 51698 tgctggggctggggctggcgctg 51720
>gb|U14003.1|ECOUW93 Escherichia coli K-12 chromosomal region from 92.8 to 00.1 minutes Length = 338534 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 472 gatgcaggcattgggcaggtggt 494 ||||||||||||||||||||||| Sbjct: 113396 gatgcaggcattgggcaggtggt 113418
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22 Length = 909203 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 618681 tgctggggctggggctggcgctg 618703
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 472 gatgcaggcattgggcaggtggt 494 ||||||||||||||||||||||| Sbjct: 4090144 gatgcaggcattgggcaggtggt 4090166
>dbj|D87002.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:31F3 Length = 36742 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctg 228 ||||||||||||||||||||||| Sbjct: 27129 tgctggggctggggctggcgctg 27151
>gb|AC155074.12| Mus musculus chromosome 15, clone RP24-127H11, complete sequence Length = 184795 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 99820 cattgctggggctggggctggggctg 99795
>ref|XM_533927.2| PREDICTED: Canis familiaris similar to Variable ABnormal morphology family member (vab-19), transcript variant 1 (LOC476723), mRNA Length = 2866 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 1435 gctggggctggggctggcgctg 1414
>ref|XM_845051.1| PREDICTED: Canis familiaris hypothetical protein LOC608134 (LOC608134), mRNA Length = 3231 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 234 gctggggctggggctggcgctg 255
>gb|BC016203.1| Mus musculus SHANK-associated RH domain interacting protein, mRNA (cDNA clone MGC:27664 IMAGE:4527839), complete cds Length = 1688 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 784 cattgctggggctggggctggggctg 759
>gb|BC055758.1| Mus musculus SHANK-associated RH domain interacting protein, mRNA (cDNA clone MGC:67162 IMAGE:6415354), complete cds Length = 1914 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 843 cattgctggggctggggctggggctg 818
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 213 gctggggctggcgctgcttctgctgg 238 |||||||||||||||||| ||||||| Sbjct: 3592226 gctggggctggcgctgctgctgctgg 3592201
>gb|AC133198.3| Mus musculus BAC clone RP23-251I6 from chromosome 17, complete sequence Length = 182898 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 82813 gctggggctggggctggcgctg 82792
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 tggggctggggctggcgctgct 230 |||||||||||||||||||||| Sbjct: 145265 tggggctggggctggcgctgct 145244
>gb|AC093573.17| Pan troglodytes clone rp43-32j20, complete sequence Length = 170502 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 12629 gctggggctggggctggcgctg 12608
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 406 ggccagcaccagggtggcatga 427 |||||||||||||||||||||| Sbjct: 4269215 ggccagcaccagggtggcatga 4269194
>dbj|AK165824.1| Mus musculus 11 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:G630097P18 product:similar to shank-interacting protein [Mus musculus], full insert sequence Length = 1660 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 623 cattgctggggctggggctggggctg 598
>dbj|AK171774.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830010G21 product:similar to shank-interacting protein [Mus musculus], full insert sequence Length = 1906 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 1032 cattgctggggctggggctggggctg 1007
>dbj|AK002878.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610041B22 product:SHARPIN homolog [Rattus norvegicus], full insert sequence Length = 1303 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 414 cattgctggggctggggctggggctg 389
>gb|AC008132.35| Homo sapiens chromosome 22 clone pac995o6 map 22q11, complete sequence Length = 145598 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 59776 gctggggctggggctggcgctg 59755
>gb|AC023491.23| Homo sapiens chromosome 22 clone b659m11 map 22q11, complete sequence Length = 150754 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 91272 gctggggctggggctggcgctg 91293
>gb|AC008018.20| Homo sapiens chromosome 22 clone b379n11 map 22q11, complete sequence Length = 180884 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 122773 gctggggctggggctggcgctg 122752
>gb|AC023490.5| Homo sapiens chromosome 22 clone b33l19 map 22q11, complete sequence Length = 176051 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 28506 gctggggctggggctggcgctg 28485
>gb|AC007981.47| Homo sapiens chromosome 22 clone b291 map 22q11, complete sequence Length = 175358 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 54921 gctggggctggggctggcgctg 54900
>gb|AC011718.2| Homo sapiens chromosome 22 clone b2280l11 map 22q11, complete sequence Length = 94384 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 11252 gctggggctggggctggcgctg 11273
>gb|AC012330.10| Homo sapiens clone b2262a2, complete sequence Length = 105288 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 96488 gctggggctggggctggcgctg 96509
>gb|AC127285.4| Mus musculus BAC clone RP23-336P20 from chromosome 8, complete sequence Length = 232127 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 70 cctcactcccactcccaccccccactcttc 99 ||||||||||||||||| ||||| |||||| Sbjct: 96874 cctcactcccactcccatccccctctcttc 96903
>dbj|AK180163.1| Mus musculus cDNA, clone:Y0G0113C14, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000023211, based on BLAT search Length = 458 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 57 cattgctggggctggggctggggctg 32
>dbj|AK178398.1| Mus musculus cDNA, clone:Y0G0106I18, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000023211, based on BLAT search Length = 209 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 203 cattgctggggctggggctggcgctg 228 ||||||||||||||||||||| |||| Sbjct: 56 cattgctggggctggggctggggctg 31
>emb|AL356585.7| Human DNA sequence from clone RP11-341D18 on chromosome 22, complete sequence Length = 186858 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 77787 gctggggctggggctggcgctg 77766
>gb|AC104632.10| Mus musculus strain C57BL/6J clone rp23-368d24 map 3, complete sequence Length = 210499 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 100378 gctggggctggggctggcgctg 100357
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 431794 gctggggctggggctggcgctg 431815 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gggctggggctggcgctgct 230 |||||||||||||||||||| Sbjct: 2501216 gggctggggctggcgctgct 2501235
>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence Length = 151729 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 cctcactcccactcccaccccc 91 |||||||||||||||||||||| Sbjct: 9289 cctcactcccactcccaccccc 9268
>gb|AC132327.3| Mus musculus BAC clone RP24-194O6 from 3, complete sequence Length = 174267 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 165804 gctggggctggggctggcgctg 165825
>gb|AC171273.1| Mus musculus BAC clone RP23-137J12 from chromosome 3, complete sequence Length = 234363 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 233770 gctggggctggggctggcgctg 233749
>dbj|AP000550.1| Homo sapiens genomic DNA, chromosome 22q11.2, BCRL2 region, clone:KB1592A4 Length = 150724 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctg 228 |||||||||||||||||||||| Sbjct: 104615 gctggggctggggctggcgctg 104594
>gb|AC155166.4| Mus musculus BAC clone RP24-69M8 from chromosome 8, complete sequence Length = 212711 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctggggctggggctggcgctg 228 ||||||||||||||||||||| Sbjct: 83405 ctggggctggggctggcgctg 83425
>ref|NM_171846.1| Homo sapiens lactamase, beta (LACTB), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA Length = 1388 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 174 gctggggctggggctggcgct 194
>ref|NM_032857.2| Homo sapiens lactamase, beta (LACTB), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 1956 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 174 gctggggctggggctggcgct 194
>gb|BC037198.1| Homo sapiens lactamase, beta, mRNA (cDNA clone MGC:24991 IMAGE:4780106), complete cds Length = 1358 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 148 gctggggctggggctggcgct 168
>ref|XM_869699.1| PREDICTED: Bos taurus similar to Tumor necrosis factor receptor superfamily member Fn14 precursor (Fibroblast growth factor-inducible immediate-early response protein 14) (FGF-inducible 14) (Tweak-receptor) (TweakR) (LOC617439), mRNA Length = 966 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||| |||||||||||||| Sbjct: 56 tgctggggctcgggctggcgctgct 80
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 247 cgccgcctggcctcggccgct 267 ||||||||||||||||||||| Sbjct: 1067495 cgccgcctggcctcggccgct 1067515
>gb|AC107740.17| Mus musculus chromosome 9, clone RP23-340D4, complete sequence Length = 223066 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 68 cacctcactcccactcccacccccc 92 |||||||| |||||||||||||||| Sbjct: 210556 cacctcacccccactcccacccccc 210532
>gb|AC131679.2| Mus musculus BAC clone RP23-339I6 from chromosome 5, complete sequence Length = 198890 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 gcagctggagtcactgaatat 572 ||||||||||||||||||||| Sbjct: 9802 gcagctggagtcactgaatat 9822
>gb|AC078834.5| Homo sapiens BAC clone RP11-69O3 from 7, complete sequence Length = 154737 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 ggccagcaccagggtggcatg 426 ||||||||||||||||||||| Sbjct: 153203 ggccagcaccagggtggcatg 153223
>gb|AC139341.3| Atelerix albiventris clone LB4-464N6, complete sequence Length = 195266 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cccactcccaccccccactct 97 ||||||||||||||||||||| Sbjct: 50652 cccactcccaccccccactct 50672
>gb|AC134570.5| Mus musculus BAC clone RP24-252B18 from chromosome 18, complete sequence Length = 183551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 cccactcccaccccccactct 97 ||||||||||||||||||||| Sbjct: 3735 cccactcccaccccccactct 3715
>gb|AC107755.12| Mus musculus chromosome 9, clone RP23-225C11, complete sequence Length = 178844 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 68 cacctcactcccactcccacccccc 92 |||||||| |||||||||||||||| Sbjct: 152159 cacctcacccccactcccacccccc 152183
>gb|AC126255.3| Mus musculus BAC clone RP24-218F22 from chromosome 18, complete sequence Length = 166367 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 cccactcccaccccccactct 97 ||||||||||||||||||||| Sbjct: 136274 cccactcccaccccccactct 136254
>gb|AC104133.5| Homo sapiens BAC clone RP11-451N23 from 7, complete sequence Length = 46877 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 406 ggccagcaccagggtggcatg 426 ||||||||||||||||||||| Sbjct: 464 ggccagcaccagggtggcatg 484
>ref|XM_860226.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 14 (LOC478158), mRNA Length = 5395 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2008 tgctggggctggggctggggctgct 1984
>ref|XM_535333.2| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 1 (LOC478158), mRNA Length = 5404 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2011 tgctggggctggggctggggctgct 1987
>ref|XM_860193.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 13 (LOC478158), mRNA Length = 5323 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 1930 tgctggggctggggctggggctgct 1906
>ref|XM_860176.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 12 (LOC478158), mRNA Length = 5416 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2029 tgctggggctggggctggggctgct 2005
>ref|XM_860159.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 11 (LOC478158), mRNA Length = 4963 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 1570 tgctggggctggggctggggctgct 1546
>ref|XM_860145.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 10 (LOC478158), mRNA Length = 5260 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2011 tgctggggctggggctggggctgct 1987
>ref|XM_860124.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 9 (LOC478158), mRNA Length = 5272 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2011 tgctggggctggggctggggctgct 1987
>ref|XM_860105.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 8 (LOC478158), mRNA Length = 5116 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 1723 tgctggggctggggctggggctgct 1699
>ref|XM_860089.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 7 (LOC478158), mRNA Length = 5161 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2011 tgctggggctggggctggggctgct 1987
>ref|XM_847075.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 2 (LOC478158), mRNA Length = 5529 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2136 tgctggggctggggctggggctgct 2112
>ref|XM_860048.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 6 (LOC478158), mRNA Length = 5298 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 1905 tgctggggctggggctggggctgct 1881
>ref|XM_860027.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 5 (LOC478158), mRNA Length = 4681 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 1288 tgctggggctggggctggggctgct 1264
>ref|XM_860010.1| PREDICTED: Canis familiaris similar to pumilio 1 isoform 1, transcript variant 4 (LOC478158), mRNA Length = 4678 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 1285 tgctggggctggggctggggctgct 1261
>gb|AY358709.1| Homo sapiens clone DNA76522 MRPL56 (UNQ843) mRNA, complete cds Length = 1321 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 155 gctggggctggggctggcgct 175
>gb|AC091507.2| Sus scrofa clone RP44-397B10, complete sequence Length = 174031 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctggggctggggctggcgctg 228 ||||||||||||||||||||| Sbjct: 36200 ctggggctggggctggcgctg 36220
>emb|AL133466.22| Human DNA sequence from clone RP5-831C21 on chromosome 20 Contains the GGTLA4 gene for gamma-glutamyltransferase-like activity 4, the 5' end of a novel protein similar to gamma-glutamyl transpeptidase-related protein (GGT-Rel) and the POM121L3 gene for POM121 membrane glycoprotein-like 3 (rat), complete sequence Length = 117890 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ctggggctggggctggcgctg 228 ||||||||||||||||||||| Sbjct: 25452 ctggggctggggctggcgctg 25432
>emb|AL645943.19| Mouse DNA sequence from clone RP23-130E22 on chromosome 11 Contains a prohibitin (Phb) pseudogene and a novel gene, complete sequence Length = 213383 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 actcccactcccaccccccac 94 ||||||||||||||||||||| Sbjct: 136037 actcccactcccaccccccac 136057
>gb|BC067288.1| Homo sapiens lactamase, beta, transcript variant 1, mRNA (cDNA clone MGC:75417 IMAGE:30366453), complete cds Length = 2029 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 187 gctggggctggggctggcgct 207
>gb|AC051635.7| Homo sapiens chromosome 18, clone RP11-540A4, complete sequence Length = 158608 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 tggggctggggctggcgctgc 229 ||||||||||||||||||||| Sbjct: 19237 tggggctggggctggcgctgc 19257
>emb|CR617302.1| full-length cDNA clone CS0DM007YF16 of Fetal liver of Homo sapiens (human) Length = 1921 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 186 gctggggctggggctggcgct 206
>gb|AC096630.16| Pan troglodytes clone rp43-71g16, complete sequence Length = 160603 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 ctggggctggggctggcgctg 228 ||||||||||||||||||||| Sbjct: 50654 ctggggctggggctggcgctg 50634
>emb|CR602675.1| full-length cDNA clone CS0DI074YB20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1891 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 160 gctggggctggggctggcgct 180
>dbj|AK027808.1| Homo sapiens cDNA FLJ14902 fis, clone PLACE1005467 Length = 2025 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 175 gctggggctggggctggcgct 195
>emb|CR591560.1| full-length cDNA clone CS0DJ011YB05 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1772 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 207 gctggggctggggctggcgct 227
>ref|XM_928119.1| PREDICTED: Homo sapiens similar to gamma-glutamyltransferase-like activity 1 (LOC645076), mRNA Length = 1297 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctggggctggggctggcgctg 228 ||||||||||||||||||||| Sbjct: 857 ctggggctggggctggcgctg 877
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 cccactcccaccccccactct 97 ||||||||||||||||||||| Sbjct: 1186060 cccactcccaccccccactct 1186080
>gb|AC159204.2| Mus musculus BAC clone RP23-229H13 from chromosome 12, complete sequence Length = 211156 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 71 ctcactcccactcccaccccc 91 ||||||||||||||||||||| Sbjct: 53827 ctcactcccactcccaccccc 53807
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 247 cgccgcctggcctcggccgct 267 ||||||||||||||||||||| Sbjct: 430291 cgccgcctggcctcggccgct 430271
>gb|AC008124.8|AC008124 Homo sapiens Chromosome 12q13-62.7-72 BAC RPCI11-352M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183387 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 150479 gctggggctggggctggcgct 150459
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 cccccttcttctcgtcagccgcatctccc 64 |||||||||||||||| ||| |||||||| Sbjct: 24905617 cccccttcttctcgtctgcctcatctccc 24905589
>gb|AC087612.6| Homo sapiens chromosome 15, clone RP11-69G7, complete sequence Length = 145405 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgct 227 ||||||||||||||||||||| Sbjct: 63602 gctggggctggggctggcgct 63582
>ref|XM_342928.2| PREDICTED: Rattus norvegicus pumilio 1 (Drosophila) (predicted) (Pum1_predicted), mRNA Length = 4164 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcgctgct 230 |||||||||||||||||| |||||| Sbjct: 2150 tgctggggctggggctggggctgct 2126
>dbj|AK120039.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-E08, full insert sequence Length = 569 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 cccccttcttctcgtcagccgcatctccc 64 |||||||||||||||| ||| |||||||| Sbjct: 228 cccccttcttctcgtctgcctcatctccc 200
>dbj|AK072653.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134L04, full insert sequence Length = 1016 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 cccccttcttctcgtcagccgcatctccc 64 |||||||||||||||| ||| |||||||| Sbjct: 678 cccccttcttctcgtctgcctcatctccc 650
>gb|AC132271.5| Mus musculus BAC clone RP24-338E23 from 5, complete sequence Length = 173029 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 552 gcagctggagtcactgaatat 572 ||||||||||||||||||||| Sbjct: 165587 gcagctggagtcactgaatat 165607
>dbj|AK064058.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-F07, full insert sequence Length = 566 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 cccccttcttctcgtcagccgcatctccc 64 |||||||||||||||| ||| |||||||| Sbjct: 228 cccccttcttctcgtctgcctcatctccc 200
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 36 cccccttcttctcgtcagccgcatctccc 64 |||||||||||||||| ||| |||||||| Sbjct: 24833823 cccccttcttctcgtctgcctcatctccc 24833795
>emb|AL831797.4|CNS08CAA Oryza sativa chromosome 12, . BAC OSJNBa0010M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132741 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 36 cccccttcttctcgtcagccgcatctccc 64 |||||||||||||||| ||| |||||||| Sbjct: 59251 cccccttcttctcgtctgcctcatctccc 59279
>gb|AC133497.4| Mus musculus BAC clone RP24-390A22 from 8, complete sequence Length = 158740 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 ctggggctggggctggcgctg 228 ||||||||||||||||||||| Sbjct: 124192 ctggggctggggctggcgctg 124212
>emb|BX004852.5| Mouse DNA sequence from clone RP23-26D22 on chromosome X, complete sequence Length = 165777 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 70 cctcactcccactcccaccccccactctt 98 |||| ||||| |||||||||||||||||| Sbjct: 113854 cctccctccctctcccaccccccactctt 113882
>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete sequence Length = 211194 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 acctcactcccactcccaccc 89 ||||||||||||||||||||| Sbjct: 124212 acctcactcccactcccaccc 124232
>emb|AL645853.12| Mouse DNA sequence from clone RP23-329L1 on chromosome 11, complete sequence Length = 94538 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgcttctgc 235 ||||||||||||||||| ||||| ||||| Sbjct: 9631 gctggggctggggctggggctgcctctgc 9659
>gb|AY542376.1| Ambystoma mexicanum POU domain transcription factor oct-4 mRNA, complete cds Length = 3111 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 gggctggcgctgcttctgctggcg 240 |||||||||||||| ||||||||| Sbjct: 597 gggctggcgctgctgctgctggcg 574
>ref|XM_511829.1| PREDICTED: Pan troglodytes similar to KIAA0672 gene product (LOC455062), mRNA Length = 4371 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 3396 gctggggctggggctggcgc 3377
>gb|AC167720.2| Mus musculus BAC clone RP24-216G15 from chromosome 16, complete sequence Length = 172721 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctcccactcccaccccccac 94 |||||||||||||||||||| Sbjct: 135098 ctcccactcccaccccccac 135079
>ref|XM_465807.1| Oryza sativa (japonica cultivar-group), mRNA Length = 369 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ggtggtgactggtgagggag 146 |||||||||||||||||||| Sbjct: 175 ggtggtgactggtgagggag 156
>ref|NM_001031031.1| Gallus gallus B-cell CLL/lymphoma 11A (zinc finger protein) (BCL11A), mRNA Length = 5541 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 3616 gctggggctggggctggggctgct 3593
>gb|AC153633.10| Mus musculus 6 BAC RP23-13K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216841 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cccactcccaccccccactc 96 |||||||||||||||||||| Sbjct: 213661 cccactcccaccccccactc 213642
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcgctgcttctgctggcgc 241 |||||||||||||||||||| Sbjct: 957734 ggcgctgcttctgctggcgc 957753
>gb|AF218784.1| Gallus gallus MHC Rfp-Y class I alpha chain (YFVI) pseudogene, YFV-Y-FVw*7 allele, complete sequence Length = 2801 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgcttctgctgg 238 ||||||||||||||||| ||||| ||||||| Sbjct: 413 gctggggctggggctggggctgcagctgctgg 444
>gb|AC153878.11| Mus musculus 6 BAC RP23-229B22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185647 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cccactcccaccccccactc 96 |||||||||||||||||||| Sbjct: 59953 cccactcccaccccccactc 59972
>gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, complete sequence Length = 195286 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 146454 gctggggctggggctggggctgct 146431
>gb|AC131976.6| Mus musculus chromosome 1, clone RP24-150D10, complete sequence Length = 167470 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cactcccactcccaccccccactc 96 ||||||||||||| |||||||||| Sbjct: 163576 cactcccactccccccccccactc 163599
>gb|AC098570.7| Mus musculus chromosome 1, clone RP23-278N11, complete sequence Length = 193097 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cccactcccaccccccactc 96 |||||||||||||||||||| Sbjct: 65597 cccactcccaccccccactc 65616
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gggctggggctggcgctgct 230 |||||||||||||||||||| Sbjct: 3076189 gggctggggctggcgctgct 3076170
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cctcactcccactcccacccccca 93 |||||||||||| ||||||||||| Sbjct: 92935 cctcactcccacccccacccccca 92958
>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7 Length = 684973 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 tggggctggggctggcgctgcttc 232 |||||||||||||||| ||||||| Sbjct: 41609 tggggctggggctggccctgcttc 41632
>gb|AC138682.14| Mus musculus chromosome 5, clone RP23-34L23, complete sequence Length = 241585 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 119695 ttgctggggctggggctggggctg 119718
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggaggagatggagcgagg 197 |||||||||||||||||||| Sbjct: 8331980 gaggaggagatggagcgagg 8331999
>gb|AC138904.3| Homo sapiens chromosome 16 clone RP11-57A19, complete sequence Length = 177163 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 125461 gctggggctggggctggggctgct 125438
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gggctggggctggcgctgct 230 |||||||||||||||||||| Sbjct: 220540 gggctggggctggcgctgct 220521
>gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16 genomic sequence, complete sequence Length = 44879 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gtagggtggtggtgactggtgagg 143 ||||| |||||||||||||||||| Sbjct: 22781 gtaggttggtggtgactggtgagg 22804
>gb|AC122428.4| Mus musculus BAC clone RP24-175C20 from chromosome 9, complete sequence Length = 185902 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctcactcccactcccacccc 90 |||||||||||||||||||| Sbjct: 77717 ctcactcccactcccacccc 77698
>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete sequence Length = 197720 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctcccactcccaccccccac 94 |||||||||||||||||||| Sbjct: 174437 ctcccactcccaccccccac 174418
>gb|AC112791.3| Mus musculus BAC clone RP23-182O1 from 13, complete sequence Length = 208443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tcactcccactcccaccccc 91 |||||||||||||||||||| Sbjct: 85704 tcactcccactcccaccccc 85723
>gb|AC122884.2| Mus musculus BAC clone RP23-88O13 from 5, complete sequence Length = 160295 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 gtcaaatcttcttctgtttc 347 |||||||||||||||||||| Sbjct: 18260 gtcaaatcttcttctgtttc 18241
>ref|XM_863609.1| PREDICTED: Canis familiaris hypothetical protein LOC612185 (LOC612185), mRNA Length = 873 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 474 gctggggctggggctggcgc 455
>gb|AC114737.3| Homo sapiens BAC clone CTD-2192D1 from 7, complete sequence Length = 99227 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tggggctggggctggcgctg 228 |||||||||||||||||||| Sbjct: 79119 tggggctggggctggcgctg 79138
>gb|AC117600.9| Mus musculus chromosome 1, clone RP23-449C20, complete sequence Length = 195848 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cactcccactcccaccccccactc 96 ||||||||||||| |||||||||| Sbjct: 27651 cactcccactccccccccccactc 27674
>gb|DQ103310.1| Phytophthora ramorum clone F07,11A microsatellite 97 sequence Length = 312 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 206 tgctggggctggggctggcgctgcttctgctg 237 |||||| ||||| |||||||||||| |||||| Sbjct: 103 tgctggcgctggcgctggcgctgctactgctg 134
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gcaggcattgggcaggtggt 494 |||||||||||||||||||| Sbjct: 4694290 gcaggcattgggcaggtggt 4694309
>gb|BC094754.1| Homo sapiens KIAA0672 gene product, mRNA (cDNA clone IMAGE:30337933) Length = 3965 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 1868 gctggggctggggctggcgc 1849
>emb|AL158829.14| Human DNA sequence from clone RP11-406O23 on chromosome 9 Contains part of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2), a novel gene and a CpG island, complete sequence Length = 136723 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tcacctcactcccactccca 86 |||||||||||||||||||| Sbjct: 2136 tcacctcactcccactccca 2117
>gb|AC084794.3| Homo sapiens chromosome 16 clone CTA-154B9, complete sequence Length = 230510 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 87274 gctggggctggggctggggctgct 87297
>gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, complete sequence Length = 136331 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 21902 gctggggctggggctggggctgct 21879
>ref|XM_774988.1| PREDICTED: Strongylocentrotus purpuratus similar to KIAA0261 (LOC574639), mRNA Length = 1803 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gccagtcggaggaggagatg 189 |||||||||||||||||||| Sbjct: 1397 gccagtcggaggaggagatg 1416
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gggctggggctggcgctgct 230 |||||||||||||||||||| Sbjct: 308430 gggctggggctggcgctgct 308411
>emb|BX572603.1| Rhodopseudomonas palustris CGA009 complete genome; segment 11/16 Length = 349635 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgcttctgctgg 238 ||||| |||||||||||||||| ||| ||||| Sbjct: 57775 gctggtgctggggctggcgctgtttccgctgg 57744
>gb|BC070074.1| Homo sapiens KIAA0672 gene product, mRNA (cDNA clone IMAGE:30338180) Length = 3965 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 1868 gctggggctggggctggcgc 1849
>emb|AL645988.6| Mouse DNA sequence from clone RP23-67J22 on chromosome 11 Contains four novel genes (9130409J20Rik, A530088H08Rik), two genes for a novel proteins (2310004I24Rik, A730055C05Rik, LOC193004), the Sco1 gene for SCO cytochrome oxidase deficient homolog 1 (yeast), the 5' end of the Myh3 gene for skeletal muscle embryonic myosin heavy polypeptide 3 and a CpG island, complete sequence Length = 217003 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 cccactcccaccccccactc 96 |||||||||||||||||||| Sbjct: 191496 cccactcccaccccccactc 191477
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ctgccagtcggaggaggaga 187 |||||||||||||||||||| Sbjct: 4459 ctgccagtcggaggaggaga 4478
>emb|AL096728.1|HSM800662 Homo sapiens mRNA; cDNA DKFZp434B034 (from clone DKFZp434B034) Length = 2951 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 818 gctggggctggggctggcgc 799
>emb|AJ851441.1| Gallus gallus mRNA for hypothetical protein, clone 3a6 Length = 5541 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 3616 gctggggctggggctggggctgct 3593
>emb|AL731728.10| Mouse DNA sequence from clone RP24-531N10 on chromosome 11 Contains part of the Car10 gene for carbonic anhydrase 10, complete sequence Length = 146735 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 agctggagtcactgaatatc 573 |||||||||||||||||||| Sbjct: 89372 agctggagtcactgaatatc 89391
>ref|NM_204769.1| Gallus gallus visual system homeobox 1 homolog, CHX10-like (zebrafish) (VSX1), mRNA Length = 1996 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 286 gctggggctggggctggggctgct 309
>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25, complete sequence Length = 169168 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gggctggggctggcgctgct 230 |||||||||||||||||||| Sbjct: 89149 gggctggggctggcgctgct 89130
>gb|AC009374.7| Drosophila melanogaster 3L BAC RP98-4J11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164719 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 cactcccactcccaccccccactc 96 |||||||||| ||||||||||||| Sbjct: 12382 cactcccactgccaccccccactc 12405
>gb|AF033106.1| Grus canadensis pratensis MHC class I heavy chain (f51) mRNA, complete cds Length = 1675 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 55 gctggggctggggctggggctgct 78
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||| |||||||||| Sbjct: 2869306 gctggggctgggggtggcgctgct 2869283
>gb|AC021553.14| Homo sapiens chromosome 15, clone RP11-709B3, complete sequence Length = 185596 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 83799 gctggggctggggctggcgc 83780
>gb|AC020980.6| Homo sapiens chromosome 5 clone RPCI-1_167G20, complete sequence Length = 175177 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 127189 ttgctggggctggggctggggctg 127166
>gb|AC083800.13| Homo sapiens 3q BAC RP11-484M3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181395 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 123256 ttgctggggctggggctggggctg 123233
>gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, complete sequence Length = 149282 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 ctcactcccactcccacccc 90 |||||||||||||||||||| Sbjct: 72488 ctcactcccactcccacccc 72507
>gb|AC160395.2| Mus musculus BAC clone RP23-36C19 from chromosome 12, complete sequence Length = 207840 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cctcactcccactcccacccccca 93 |||||||||||| ||||||||||| Sbjct: 45342 cctcactcccacccccacccccca 45365
>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown, complete sequence Length = 182200 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 153323 ttgctggggctggggctggggctg 153346
>gb|AC164093.2| Mus musculus BAC clone RP23-131O16 from chromosome 16, complete sequence Length = 229443 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 139993 ttgctggggctggggctggggctg 140016
>gb|AC016074.6| Homo sapiens, clone RP11-697B24, complete sequence Length = 164239 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ctcacctcactcccactcccaccc 89 |||||| ||||||||||||||||| Sbjct: 147562 ctcaccccactcccactcccaccc 147539
>dbj|AK036393.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830004K05 product:thiosulfate sulfurtransferase, mitochondrial, full insert sequence Length = 2631 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 actcccactcccacccccca 93 |||||||||||||||||||| Sbjct: 2562 actcccactcccacccccca 2543
>gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, complete sequence Length = 173919 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 10719 gctggggctggggctggcgc 10738
>gb|AC159282.2| Mus musculus BAC clone RP23-329M17 from chromosome 12, complete sequence Length = 210571 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cctcactcccactcccacccccca 93 |||||||||||| ||||||||||| Sbjct: 202410 cctcactcccacccccacccccca 202433
>gb|AC092248.1|AC092248 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR37K07, complete sequence Length = 157722 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 cttcttctcgtcagccgcat 59 |||||||||||||||||||| Sbjct: 47649 cttcttctcgtcagccgcat 47630
>gb|AC092227.1|AC092227 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR20P10, complete sequence Length = 157482 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cttcttctcgtcagccgcat 59 |||||||||||||||||||| Sbjct: 4498 cttcttctcgtcagccgcat 4517
>dbj|AK053710.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130220E24 product:synbindin, full insert sequence Length = 1340 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 ctcactcccactcccacccc 90 |||||||||||||||||||| Sbjct: 306 ctcactcccactcccacccc 287
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 ctgccagtcggaggaggaga 187 |||||||||||||||||||| Sbjct: 20273826 ctgccagtcggaggaggaga 20273845
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ggaggaggagatggagcgag 196 |||||||||||||||||||| Sbjct: 18197746 ggaggaggagatggagcgag 18197765
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggaggagatggagcgagg 197 |||||||||||||||||||| Sbjct: 8329815 gaggaggagatggagcgagg 8329834
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtggtggtgactggtgagg 143 |||||||||||||||||||| Sbjct: 30784761 ggtggtggtgactggtgagg 30784780 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ggtggtgactggtgagggag 146 |||||||||||||||||||| Sbjct: 17565340 ggtggtgactggtgagggag 17565359
>gb|AC009725.12|AC009725 Mus musculus chromosome , clone CT7-388N17, complete sequence Length = 145152 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ctcccactcccaccccccac 94 |||||||||||||||||||| Sbjct: 114733 ctcccactcccaccccccac 114714
>gb|AE009539.1| Brucella melitensis 16M chromosome I, section 96 of 195 of the complete sequence Length = 10029 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcgctgcttctgctggcgc 241 |||||||||||||||||||| Sbjct: 5704 ggcgctgcttctgctggcgc 5685
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gaggaggagatggagcgagg 197 |||||||||||||||||||| Sbjct: 69236 gaggaggagatggagcgagg 69255
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 tgctggggctggggctggcg 225 |||||||||||||||||||| Sbjct: 6194479 tgctggggctggggctggcg 6194460
>ref|XM_573925.1| PREDICTED: Rattus norvegicus similar to RGD1310090_predicted protein (LOC498643), mRNA Length = 968 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 aggccagcaccagggtggca 424 |||||||||||||||||||| Sbjct: 828 aggccagcaccagggtggca 809
>gb|AC124283.11| Homo sapiens chromosome 17, clone RP13-638C3, complete sequence Length = 143744 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 46954 ttgctggggctggggctggggctg 46977
>gb|AC079130.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446E21, complete sequence Length = 190587 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cccaccccccactcttctac 102 |||||||||||||||||||| Sbjct: 166441 cccaccccccactcttctac 166422
>gb|AC131102.3| Mus musculus BAC clone RP23-101H16 from chromosome 5, complete sequence Length = 208536 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ttgctggggctggggctggcgctg 228 ||||||||||||||||||| |||| Sbjct: 141367 ttgctggggctggggctggggctg 141390
>gb|AC011547.4|AC011547 Homo sapiens chromosome 19 clone LLNLR-272C5, complete sequence Length = 41174 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 23495 gctggggctggggctggggctgct 23518
>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0477A12 Length = 138141 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ggaggaggagatggagcgag 196 |||||||||||||||||||| Sbjct: 133052 ggaggaggagatggagcgag 133071
>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0487D09 Length = 161531 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggtggtggtgactggtgagg 143 |||||||||||||||||||| Sbjct: 124908 ggtggtggtgactggtgagg 124927
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 ggcattgggcaggtggtgca 497 |||||||||||||||||||| Sbjct: 2718223 ggcattgggcaggtggtgca 2718242
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcgctgcttctgctggcgc 241 |||||||||||||||||||| Sbjct: 976734 ggcgctgcttctgctggcgc 976753
>ref|NM_014859.3| Homo sapiens KIAA0672 gene product (KIAA0672), mRNA Length = 4227 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 2199 gctggggctggggctggcgc 2180
>dbj|AP004051.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1218_C12 Length = 105861 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 ggaggaggagatggagcgag 196 |||||||||||||||||||| Sbjct: 989 ggaggaggagatggagcgag 1008
>dbj|AP004086.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_D09 Length = 124026 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ggtggtgactggtgagggag 146 |||||||||||||||||||| Sbjct: 35258 ggtggtgactggtgagggag 35277
>emb|AL772166.15| Mouse DNA sequence from clone RP23-413I12 on chromosome 2, complete sequence Length = 184547 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 cacctcactcccactcccaccccc 91 |||||||| ||||||||||||||| Sbjct: 621 cacctcacccccactcccaccccc 644
>dbj|AB014572.1| Homo sapiens mRNA for KIAA0672 protein, partial cds Length = 4227 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 2199 gctggggctggggctggcgc 2180
>gb|AF178670.1|AF178670 Gallus gallus homeobox protein Chx10-1 (chx10-1) mRNA, complete cds Length = 1996 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 286 gctggggctggggctggggctgct 309
>emb|AJ325171.1|HSA325171 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CF22C Length = 533 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgctgct 230 ||||||||||||||||| |||||| Sbjct: 58 gctggggctggggctggggctgct 81
>gb|AC148872.2| Chlamydomonas reinhardtii clone cr-25P21, complete sequence Length = 45702 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgct 230 |||||||||||||||| ||||||| Sbjct: 13384 gctggggctggggctgccgctgct 13361 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 207 gctggggctggggctggcgctgcttctgctgg 238 ||||||||||||||||| ||||| ||||||| Sbjct: 13390 gctggggctggggctggggctgccgctgctgg 13359
>gb|AC113288.7| Mus musculus chromosome 5, clone RP23-414I12, complete sequence Length = 185599 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 328 gtcaaatcttcttctgtttc 347 |||||||||||||||||||| Sbjct: 9642 gtcaaatcttcttctgtttc 9661
>gb|AE003643.3| Drosophila melanogaster chromosome 2L, section 52 of 83 of the complete sequence Length = 236144 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 cttcttctcgtcagccgcat 59 |||||||||||||||||||| Sbjct: 54992 cttcttctcgtcagccgcat 54973
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 cactcccactcccaccccccactc 96 |||||||||| ||||||||||||| Sbjct: 256801 cactcccactgccaccccccactc 256778
>dbj|AP002342.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2258N2, complete sequences Length = 174548 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cctcactcccactcccacccccca 93 |||||||||||||||||| ||||| Sbjct: 11585 cctcactcccactcccactcccca 11608
>dbj|AP003731.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-677N11, complete sequence Length = 33560 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cctcactcccactcccacccccca 93 |||||||||||||||||| ||||| Sbjct: 21649 cctcactcccactcccactcccca 21672
>gb|BC089954.1| Rattus norvegicus similar to 2310043K02Rik protein, mRNA (cDNA clone MGC:109288 IMAGE:7312637), complete cds Length = 1630 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 aggccagcaccagggtggca 424 |||||||||||||||||||| Sbjct: 829 aggccagcaccagggtggca 810
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 gggctggcgctgcttctgct 236 |||||||||||||||||||| Sbjct: 178373 gggctggcgctgcttctgct 178354
>ref|NM_001012352.1| Rattus norvegicus similar to 2310043K02Rik protein (RGD1310090), mRNA Length = 1630 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 aggccagcaccagggtggca 424 |||||||||||||||||||| Sbjct: 829 aggccagcaccagggtggca 810
>gb|AC005277.1|AC005277 Homo sapiens chromosome 17, clone hRPK.597_M_12, complete sequence Length = 118788 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gctggggctggggctggcgc 226 |||||||||||||||||||| Sbjct: 116316 gctggggctggggctggcgc 116335
>dbj|AP005626.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB51H10, complete sequence Length = 74057 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ctcacctcactcccactcccaccc 89 |||||| ||||||||||||||||| Sbjct: 18903 ctcaccccactcccactcccaccc 18880
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence Length = 188083 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cccaccccccactcttctac 102 |||||||||||||||||||| Sbjct: 163191 cccaccccccactcttctac 163172
>emb|CT010498.7| Mouse DNA sequence from clone RP23-105I10 on chromosome 13, complete sequence Length = 207035 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ctcccactcccaccccccactctt 98 ||||||| |||||||||||||||| Sbjct: 48637 ctcccacccccaccccccactctt 48660
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcgctgcttctgctggcgc 241 |||||||||||||||||||| Sbjct: 973854 ggcgctgcttctgctggcgc 973873
>gb|L33930.1|HUMCD24B Homo sapiens CD24 signal transducer mRNA, complete cds and 3' region Length = 2116 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 212 ggctggggctggcgctgcttctgctggc 239 |||||||||||| |||||| |||||||| Sbjct: 79 ggctggggctggggctgctgctgctggc 106
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 gaatgatgcaggcattgggc 487 |||||||||||||||||||| Sbjct: 405677 gaatgatgcaggcattgggc 405696
>gb|U66059.1| Human germline T-cell receptor beta chain Dopamine-beta-hydroxylase-like, TRY1, TRY2, TRY3, TCRBV27S1P, TCRBV22S1A2N1T, TCRBV9S1A1T, TCRBV7S1A1N2T, TCRBV5S1A1T, TCRBV13S3, TCRBV6S7P, TCRBV7S3A2T, TCRBV13S2A1T, TCRBV9S2A2PT, TCRBV7S2A1N4T, TCRBV13S9/13S2A1T, TCRBV6S5A1N1, TCRBV30S1P, TCRBV31S1, TCRBV13S5, TCRBV6S1A1N1, TCRBV32S1P, TCRBV5S5P, TCRBV1S1A1N1, TCRBV12S2A1T, TCRBV21S1, TCRBV8S4P, TCRBV12S3, TCRBV21S3A2N2T, TCRBV8S5P, TCRBV13S1 genes from bases 1 to 267156 (section 1 of 3) Length = 267156 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 209 tggggctggggctggcgctgcttc 232 |||||||||||||||| ||||||| Sbjct: 41609 tggggctggggctggccctgcttc 41632
>emb|AL935278.7| Mouse DNA sequence from clone RP23-84E1 on chromosome 2, complete sequence Length = 183353 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 386 cagttgagctcatttccgcaggcc 409 |||||||||||||| ||||||||| Sbjct: 135317 cagttgagctcattgccgcaggcc 135340
>gb|AC153922.6| Mus musculus 6 BAC RP23-81P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 234722 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 cccactcccaccccccactc 96 |||||||||||||||||||| Sbjct: 146941 cccactcccaccccccactc 146960
>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete sequence Length = 188624 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 cacctcactcccactcccaccccc 91 |||||||| ||||||||||||||| Sbjct: 187245 cacctcacccccactcccaccccc 187268
>emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on chromosome 4, complete sequence Length = 214456 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 tggggctggggctggcgctg 228 |||||||||||||||||||| Sbjct: 173307 tggggctggggctggcgctg 173326
>emb|AL583893.17| Mouse DNA sequence from clone RP23-189A18 on chromosome 15, complete sequence Length = 184558 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 actcccactcccacccccca 93 |||||||||||||||||||| Sbjct: 174416 actcccactcccacccccca 174435 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,914,304 Number of Sequences: 3902068 Number of extensions: 4914304 Number of successful extensions: 130137 Number of sequences better than 10.0: 220 Number of HSP's better than 10.0 without gapping: 222 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 127731 Number of HSP's gapped (non-prelim): 2365 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
