Clone Name | bart21f03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469208.1| Oryza sativa (japonica cultivar-group), mRNA Length = 819 Score = 244 bits (123), Expect = 3e-61 Identities = 216/247 (87%) Strand = Plus / Plus Query: 346 acaaccgcctctccggggccggctccctcgccgccgtcgccgagtcctgcggcgggacca 405 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 260 acaaccgcctctcgggggccgcctccctcgccgccgtcgccgagtcctgcggcgccacgc 319 Query: 406 tccgccacctcgacctgggaaacaaccgcttcgccgccgtcgaggagctcgccccgctcg 465 |||||||||||||||| || |||||||||||||||| ||||| ||||| || ||||||| Sbjct: 320 tccgccacctcgacctcgggaacaaccgcttcgccgacgtcgccgagctggcgccgctcg 379 Query: 466 cgccgctcggggtcgagtcgctggacctgttccagtgccccgtcgccaagctcaaggggt 525 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct: 380 cgccgcacggggtcgagtcgctcgacctgtaccagtgccccgtcaccaaggccaaggggt 439 Query: 526 acagggagaaggtgtttgcgctggttcccagcttgaagtacttggatggtgtcgatgccg 585 ||||||| |||||||| |||||| | |||||| | |||| |||||| || | || |||| Sbjct: 440 acagggacaaggtgttcgcgctgatccccagcctcaagttcttggacggcatggacgccg 499 Query: 586 agggcaa 592 ||||||| Sbjct: 500 agggcaa 506 Score = 176 bits (89), Expect = 6e-41 Identities = 166/193 (86%), Gaps = 9/193 (4%) Strand = Plus / Plus Query: 97 ccggagaggacgacgcggcgtgggagagggccatcagcgcggccgtcaagagcgcgccgc 156 |||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| Sbjct: 20 ccggagaggacgacgccgcgtgggagcgcgccatcgcggcggccgtcaagaacgc----- 74 Query: 157 tctcccccttctccgcgcccaaaaccctaaccctcgacggcgccgtcaagtcctccacgg 216 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| | Sbjct: 75 ----ccccttctccgcccccaagaccctaaccctcgacggcgccgtcaagtccaccaccg 130 Query: 217 gccgcctcccctcgccgtccctcttcgaccgcttcccctcgctcgaggagctctccgtgg 276 ||||||||||||||||||| ||| ||| ||||| ||| || ||||||||||||||||| | Sbjct: 131 gccgcctcccctcgccgtcgctcctcggccgctacccgtccctcgaggagctctccgtcg 190 Query: 277 ccggcgcccgcct 289 ||||||||||||| Sbjct: 191 ccggcgcccgcct 203
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete sequence Length = 125380 Score = 244 bits (123), Expect = 3e-61 Identities = 216/247 (87%) Strand = Plus / Minus Query: 346 acaaccgcctctccggggccggctccctcgccgccgtcgccgagtcctgcggcgggacca 405 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 16393 acaaccgcctctcgggggccgcctccctcgccgccgtcgccgagtcctgcggcgccacgc 16334 Query: 406 tccgccacctcgacctgggaaacaaccgcttcgccgccgtcgaggagctcgccccgctcg 465 |||||||||||||||| || |||||||||||||||| ||||| ||||| || ||||||| Sbjct: 16333 tccgccacctcgacctcgggaacaaccgcttcgccgacgtcgccgagctggcgccgctcg 16274 Query: 466 cgccgctcggggtcgagtcgctggacctgttccagtgccccgtcgccaagctcaaggggt 525 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct: 16273 cgccgcacggggtcgagtcgctcgacctgtaccagtgccccgtcaccaaggccaaggggt 16214 Query: 526 acagggagaaggtgtttgcgctggttcccagcttgaagtacttggatggtgtcgatgccg 585 ||||||| |||||||| |||||| | |||||| | |||| |||||| || | || |||| Sbjct: 16213 acagggacaaggtgttcgcgctgatccccagcctcaagttcttggacggcatggacgccg 16154 Query: 586 agggcaa 592 ||||||| Sbjct: 16153 agggcaa 16147 Score = 176 bits (89), Expect = 6e-41 Identities = 166/193 (86%), Gaps = 9/193 (4%) Strand = Plus / Minus Query: 97 ccggagaggacgacgcggcgtgggagagggccatcagcgcggccgtcaagagcgcgccgc 156 |||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| Sbjct: 16633 ccggagaggacgacgccgcgtgggagcgcgccatcgcggcggccgtcaagaacgc----- 16579 Query: 157 tctcccccttctccgcgcccaaaaccctaaccctcgacggcgccgtcaagtcctccacgg 216 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| | Sbjct: 16578 ----ccccttctccgcccccaagaccctaaccctcgacggcgccgtcaagtccaccaccg 16523 Query: 217 gccgcctcccctcgccgtccctcttcgaccgcttcccctcgctcgaggagctctccgtgg 276 ||||||||||||||||||| ||| ||| ||||| ||| || ||||||||||||||||| | Sbjct: 16522 gccgcctcccctcgccgtcgctcctcggccgctacccgtccctcgaggagctctccgtcg 16463 Query: 277 ccggcgcccgcct 289 ||||||||||||| Sbjct: 16462 ccggcgcccgcct 16450
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 244 bits (123), Expect = 3e-61 Identities = 216/247 (87%) Strand = Plus / Plus Query: 346 acaaccgcctctccggggccggctccctcgccgccgtcgccgagtcctgcggcgggacca 405 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 26086693 acaaccgcctctcgggggccgcctccctcgccgccgtcgccgagtcctgcggcgccacgc 26086752 Query: 406 tccgccacctcgacctgggaaacaaccgcttcgccgccgtcgaggagctcgccccgctcg 465 |||||||||||||||| || |||||||||||||||| ||||| ||||| || ||||||| Sbjct: 26086753 tccgccacctcgacctcgggaacaaccgcttcgccgacgtcgccgagctggcgccgctcg 26086812 Query: 466 cgccgctcggggtcgagtcgctggacctgttccagtgccccgtcgccaagctcaaggggt 525 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct: 26086813 cgccgcacggggtcgagtcgctcgacctgtaccagtgccccgtcaccaaggccaaggggt 26086872 Query: 526 acagggagaaggtgtttgcgctggttcccagcttgaagtacttggatggtgtcgatgccg 585 ||||||| |||||||| |||||| | |||||| | |||| |||||| || | || |||| Sbjct: 26086873 acagggacaaggtgttcgcgctgatccccagcctcaagttcttggacggcatggacgccg 26086932 Query: 586 agggcaa 592 ||||||| Sbjct: 26086933 agggcaa 26086939 Score = 176 bits (89), Expect = 6e-41 Identities = 166/193 (86%), Gaps = 9/193 (4%) Strand = Plus / Plus Query: 97 ccggagaggacgacgcggcgtgggagagggccatcagcgcggccgtcaagagcgcgccgc 156 |||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| Sbjct: 26086453 ccggagaggacgacgccgcgtgggagcgcgccatcgcggcggccgtcaagaacgc----- 26086507 Query: 157 tctcccccttctccgcgcccaaaaccctaaccctcgacggcgccgtcaagtcctccacgg 216 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| | Sbjct: 26086508 ----ccccttctccgcccccaagaccctaaccctcgacggcgccgtcaagtccaccaccg 26086563 Query: 217 gccgcctcccctcgccgtccctcttcgaccgcttcccctcgctcgaggagctctccgtgg 276 ||||||||||||||||||| ||| ||| ||||| ||| || ||||||||||||||||| | Sbjct: 26086564 gccgcctcccctcgccgtcgctcctcggccgctacccgtccctcgaggagctctccgtcg 26086623 Query: 277 ccggcgcccgcct 289 ||||||||||||| Sbjct: 26086624 ccggcgcccgcct 26086636
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 244 bits (123), Expect = 3e-61 Identities = 216/247 (87%) Strand = Plus / Minus Query: 346 acaaccgcctctccggggccggctccctcgccgccgtcgccgagtcctgcggcgggacca 405 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 69857 acaaccgcctctcgggggccgcctccctcgccgccgtcgccgagtcctgcggcgccacgc 69798 Query: 406 tccgccacctcgacctgggaaacaaccgcttcgccgccgtcgaggagctcgccccgctcg 465 |||||||||||||||| || |||||||||||||||| ||||| ||||| || ||||||| Sbjct: 69797 tccgccacctcgacctcgggaacaaccgcttcgccgacgtcgccgagctggcgccgctcg 69738 Query: 466 cgccgctcggggtcgagtcgctggacctgttccagtgccccgtcgccaagctcaaggggt 525 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct: 69737 cgccgcacggggtcgagtcgctcgacctgtaccagtgccccgtcaccaaggccaaggggt 69678 Query: 526 acagggagaaggtgtttgcgctggttcccagcttgaagtacttggatggtgtcgatgccg 585 ||||||| |||||||| |||||| | |||||| | |||| |||||| || | || |||| Sbjct: 69677 acagggacaaggtgttcgcgctgatccccagcctcaagttcttggacggcatggacgccg 69618 Query: 586 agggcaa 592 ||||||| Sbjct: 69617 agggcaa 69611 Score = 176 bits (89), Expect = 6e-41 Identities = 166/193 (86%), Gaps = 9/193 (4%) Strand = Plus / Minus Query: 97 ccggagaggacgacgcggcgtgggagagggccatcagcgcggccgtcaagagcgcgccgc 156 |||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| Sbjct: 70097 ccggagaggacgacgccgcgtgggagcgcgccatcgcggcggccgtcaagaacgc----- 70043 Query: 157 tctcccccttctccgcgcccaaaaccctaaccctcgacggcgccgtcaagtcctccacgg 216 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| | Sbjct: 70042 ----ccccttctccgcccccaagaccctaaccctcgacggcgccgtcaagtccaccaccg 69987 Query: 217 gccgcctcccctcgccgtccctcttcgaccgcttcccctcgctcgaggagctctccgtgg 276 ||||||||||||||||||| ||| ||| ||||| ||| || ||||||||||||||||| | Sbjct: 69986 gccgcctcccctcgccgtcgctcctcggccgctacccgtccctcgaggagctctccgtcg 69927 Query: 277 ccggcgcccgcct 289 ||||||||||||| Sbjct: 69926 ccggcgcccgcct 69914
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 244 bits (123), Expect = 3e-61 Identities = 216/247 (87%) Strand = Plus / Plus Query: 346 acaaccgcctctccggggccggctccctcgccgccgtcgccgagtcctgcggcgggacca 405 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 26178002 acaaccgcctctcgggggccgcctccctcgccgccgtcgccgagtcctgcggcgccacgc 26178061 Query: 406 tccgccacctcgacctgggaaacaaccgcttcgccgccgtcgaggagctcgccccgctcg 465 |||||||||||||||| || |||||||||||||||| ||||| ||||| || ||||||| Sbjct: 26178062 tccgccacctcgacctcgggaacaaccgcttcgccgacgtcgccgagctggcgccgctcg 26178121 Query: 466 cgccgctcggggtcgagtcgctggacctgttccagtgccccgtcgccaagctcaaggggt 525 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct: 26178122 cgccgcacggggtcgagtcgctcgacctgtaccagtgccccgtcaccaaggccaaggggt 26178181 Query: 526 acagggagaaggtgtttgcgctggttcccagcttgaagtacttggatggtgtcgatgccg 585 ||||||| |||||||| |||||| | |||||| | |||| |||||| || | || |||| Sbjct: 26178182 acagggacaaggtgttcgcgctgatccccagcctcaagttcttggacggcatggacgccg 26178241 Query: 586 agggcaa 592 ||||||| Sbjct: 26178242 agggcaa 26178248 Score = 176 bits (89), Expect = 6e-41 Identities = 166/193 (86%), Gaps = 9/193 (4%) Strand = Plus / Plus Query: 97 ccggagaggacgacgcggcgtgggagagggccatcagcgcggccgtcaagagcgcgccgc 156 |||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| Sbjct: 26177762 ccggagaggacgacgccgcgtgggagcgcgccatcgcggcggccgtcaagaacgc----- 26177816 Query: 157 tctcccccttctccgcgcccaaaaccctaaccctcgacggcgccgtcaagtcctccacgg 216 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| | Sbjct: 26177817 ----ccccttctccgcccccaagaccctaaccctcgacggcgccgtcaagtccaccaccg 26177872 Query: 217 gccgcctcccctcgccgtccctcttcgaccgcttcccctcgctcgaggagctctccgtgg 276 ||||||||||||||||||| ||| ||| ||||| ||| || ||||||||||||||||| | Sbjct: 26177873 gccgcctcccctcgccgtcgctcctcggccgctacccgtccctcgaggagctctccgtcg 26177932 Query: 277 ccggcgcccgcct 289 ||||||||||||| Sbjct: 26177933 ccggcgcccgcct 26177945
>dbj|AK108369.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-D06, full insert sequence Length = 1161 Score = 244 bits (123), Expect = 3e-61 Identities = 216/247 (87%) Strand = Plus / Plus Query: 346 acaaccgcctctccggggccggctccctcgccgccgtcgccgagtcctgcggcgggacca 405 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || Sbjct: 348 acaaccgcctctcgggggccgcctccctcgccgccgtcgccgagtcctgcggcgccacgc 407 Query: 406 tccgccacctcgacctgggaaacaaccgcttcgccgccgtcgaggagctcgccccgctcg 465 |||||||||||||||| || |||||||||||||||| ||||| ||||| || ||||||| Sbjct: 408 tccgccacctcgacctcgggaacaaccgcttcgccgacgtcgccgagctggcgccgctcg 467 Query: 466 cgccgctcggggtcgagtcgctggacctgttccagtgccccgtcgccaagctcaaggggt 525 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||| |||||||| Sbjct: 468 cgccgcacggggtcgagtcgctcgacctgtaccagtgccccgtcaccaaggccaaggggt 527 Query: 526 acagggagaaggtgtttgcgctggttcccagcttgaagtacttggatggtgtcgatgccg 585 ||||||| |||||||| |||||| | |||||| | |||| |||||| || | || |||| Sbjct: 528 acagggacaaggtgttcgcgctgatccccagcctcaagttcttggacggcatggacgccg 587 Query: 586 agggcaa 592 ||||||| Sbjct: 588 agggcaa 594 Score = 168 bits (85), Expect = 1e-38 Identities = 165/193 (85%), Gaps = 9/193 (4%) Strand = Plus / Plus Query: 97 ccggagaggacgacgcggcgtgggagagggccatcagcgcggccgtcaagagcgcgccgc 156 |||||||||||||||| ||||||||| | |||||| ||||||||||||| ||| Sbjct: 108 ccggagaggacgacgccgcgtgggagcgcgccatcgcggcggccgtcaagaacgc----- 162 Query: 157 tctcccccttctccgcgcccaaaaccctaaccctcgacggcgccgtcaagtcctccacgg 216 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||| | Sbjct: 163 ----ccccttctccgcccccaagaccctaaccctcgacggcgccgtcaagtccaccaccg 218 Query: 217 gccgcctcccctcgccgtccctcttcgaccgcttcccctcgctcgaggagctctccgtgg 276 |||||||||| |||||||| ||| ||| ||||| ||| || ||||||||||||||||| | Sbjct: 219 gccgcctcccttcgccgtcgctcctcggccgctacccgtccctcgaggagctctccgtcg 278 Query: 277 ccggcgcccgcct 289 ||||||||||||| Sbjct: 279 ccggcgcccgcct 291
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 84 gccatggccggcgccggagaggacgacg 111 |||||||||||||||||||| ||||||| Sbjct: 13508804 gccatggccggcgccggagacgacgacg 13508777 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 67 ccacccccgccgccgcagccatggccg 93 |||||||||||||||| |||||||||| Sbjct: 19535236 ccacccccgccgccgccgccatggccg 19535210 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 23427049 agccatggccgccgccggagagga 23427026 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 23424568 agccatggccgccgccggagagga 23424545
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 84 gccatggccggcgccggagaggacgacg 111 |||||||||||||||||||| ||||||| Sbjct: 88487 gccatggccggcgccggagacgacgacg 88460
>ref|XM_478366.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3720 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 67 ccacccccgccgccgcagccatggccg 93 |||||||||||||||| |||||||||| Sbjct: 287 ccacccccgccgccgccgccatggccg 261
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 373 tcgccgccgtcgccgagtcctgcggcg 399 ||||||||||||||||| ||||||||| Sbjct: 174279 tcgccgccgtcgccgaggcctgcggcg 174305
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 gccggagaggacgacgcggcgtgggag 122 ||||||||||||||||| ||||||||| Sbjct: 27617520 gccggagaggacgacgccgcgtgggag 27617546 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Plus Query: 174 cccaaaaccctaaccctcgacggcgccgtcaagtcctccacgggccgcctcccc 227 ||||| |||||||||||||| || ||||||||| ||| ||||||||||||| Sbjct: 5428970 cccaagaccctaaccctcgatggtatagtcaagtccaccatgggccgcctcccc 5429023 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggccggcgc 97 |||||||||| |||||||||||||| Sbjct: 23965136 ccgccgccgccgccatggccggcgc 23965112
>dbj|AP006055.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0778G11 Length = 59211 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 96 gccggagaggacgacgcggcgtgggag 122 ||||||||||||||||| ||||||||| Sbjct: 21703 gccggagaggacgacgccgcgtgggag 21729
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 67 ccacccccgccgccgcagccatggccg 93 |||||||||||||||| |||||||||| Sbjct: 78580 ccacccccgccgccgccgccatggccg 78554
>dbj|AP004754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0529B09 Length = 138188 Score = 44.1 bits (22), Expect = 0.53 Identities = 46/54 (85%) Strand = Plus / Plus Query: 174 cccaaaaccctaaccctcgacggcgccgtcaagtcctccacgggccgcctcccc 227 ||||| |||||||||||||| || ||||||||| ||| ||||||||||||| Sbjct: 59904 cccaagaccctaaccctcgatggtatagtcaagtccaccatgggccgcctcccc 59957
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 394 gcggcgggaccatccgccacct 415 |||||||||||||||||||||| Sbjct: 1112691 gcggcgggaccatccgccacct 1112670
>ref|XM_475129.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 552 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 90 gccggcgccggagaggacgacgcggcgtg 118 ||||||||||| || |||||||||||||| Sbjct: 322 gccggcgccggcgacgacgacgcggcgtg 350
>gb|BT018510.1| Zea mays clone EL01N0429E08.d mRNA sequence Length = 1467 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 368 ctccctcgccgccgtcgccgagtcc 392 ||||||| ||||||||||||||||| Sbjct: 36 ctccctctccgccgtcgccgagtcc 60
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 gcgccgtcaagtcctccacgg 216 ||||||||||||||||||||| Sbjct: 52005 gcgccgtcaagtcctccacgg 52025
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 453 ctcgccccgctcgcgccgctc 473 ||||||||||||||||||||| Sbjct: 2585615 ctcgccccgctcgcgccgctc 2585595
>ref|XM_864184.1| PREDICTED: Bos taurus similar to solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1, transcript variant 1 (LOC613734), mRNA Length = 1250 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 71 ccccgccgccgcagccatggc 91 ||||||||||||||||||||| Sbjct: 15 ccccgccgccgcagccatggc 35
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 90 gccggcgccggagaggacgacgcggcgtg 118 ||||||||||| || |||||||||||||| Sbjct: 56671 gccggcgccggcgacgacgacgcggcgtg 56699
>ref|XM_978185.1| PREDICTED: Mus musculus hypothetical protein LOC669953 (LOC669953), mRNA Length = 747 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 ccccgccgccgcagccatggccggc 95 |||||||||||| |||||||||||| Sbjct: 600 ccccgccgccgctgccatggccggc 624
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggccg 93 ||||||||||||||||||||| Sbjct: 71360 ccgccgccgcagccatggccg 71340
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 accgcttcgccgccgtcgagg 450 ||||||||||||||||||||| Sbjct: 2815695 accgcttcgccgccgtcgagg 2815675
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 gccggctccctcgccgccgtcgccg 387 |||| |||||||||||||||||||| Sbjct: 5455526 gccgcctccctcgccgccgtcgccg 5455550 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 gccggctccctcgccgccgtcgcc 386 ||||||||||||||||||| |||| Sbjct: 1749047 gccggctccctcgccgccgccgcc 1749024
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 90 gccggcgccggagaggacgacgcggcgtg 118 ||||||||||| || |||||||||||||| Sbjct: 17526866 gccggcgccggcgacgacgacgcggcgtg 17526894
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 455 cgccccgctcgcgccgctcggggtc 479 |||| |||||||||||||||||||| Sbjct: 7966930 cgccgcgctcgcgccgctcggggtc 7966906 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 ccggcgccggagaggacgac 110 |||||||||||||||||||| Sbjct: 6585582 ccggcgccggagaggacgac 6585563
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 cgccgccgtcgaggagctcgc 457 ||||||||||||||||||||| Sbjct: 2643189 cgccgccgtcgaggagctcgc 2643209 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 458 cccgctcgcgccgctcggggtcgagtcgctgg 489 ||||||||||||||||| || |||| |||||| Sbjct: 2837252 cccgctcgcgccgctcgcggccgaggcgctgg 2837221
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggccggcgc 97 |||||||||| |||||||||||||| Sbjct: 94747 ccgccgccgccgccatggccggcgc 94723
>dbj|AK069867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038F14, full insert sequence Length = 1521 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 gccggctccctcgccgccgtcgccg 387 |||| |||||||||||||||||||| Sbjct: 303 gccgcctccctcgccgccgtcgccg 279
>dbj|AK066754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G14, full insert sequence Length = 1797 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggccggcgc 97 |||||||||| |||||||||||||| Sbjct: 120 ccgccgccgccgccatggccggcgc 96
>dbj|AK062719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D02, full insert sequence Length = 623 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggccggcgc 97 |||||||||| |||||||||||||| Sbjct: 119 ccgccgccgccgccatggccggcgc 95
>gb|AY103719.1| Zea mays PCO137008 mRNA sequence Length = 1099 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 67 ccacccccgccgccgcagcca 87 ||||||||||||||||||||| Sbjct: 191 ccacccccgccgccgcagcca 211
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 gccggctccctcgccgccgtcgccg 387 |||| |||||||||||||||||||| Sbjct: 5455515 gccgcctccctcgccgccgtcgccg 5455539 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 363 gccggctccctcgccgccgtcgcc 386 ||||||||||||||||||| |||| Sbjct: 1749024 gccggctccctcgccgccgccgcc 1749001
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 363 gccggctccctcgccgccgtcgccg 387 |||| |||||||||||||||||||| Sbjct: 10282 gccgcctccctcgccgccgtcgccg 10258
>emb|BX649218.2|CNS09SBX Oryza sativa chromosome 12, . BAC B1280F04 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160556 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 363 gccggctccctcgccgccgtcgccg 387 |||| |||||||||||||||||||| Sbjct: 8331 gccgcctccctcgccgccgtcgccg 8355
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ggccggctccctcgccgccgt 382 ||||||||||||||||||||| Sbjct: 1276043 ggccggctccctcgccgccgt 1276023
>ref|XM_550091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2559 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 262 ccgccgccgcagccatggcc 243
>ref|XM_549873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2364 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctccctcgccgccgtcgccg 387 |||||||||||||||||||| Sbjct: 369 ctccctcgccgccgtcgccg 350
>ref|XM_474192.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1866 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccccgct 463 ||||||||| ||||||||||||| |||| Sbjct: 545 tcgccgccgacgaggagctcgccacgct 572
>ref|XM_478872.1| Oryza sativa (japonica cultivar-group), mRNA Length = 896 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 169 agccatggccgccgccggagagga 192
>ref|NM_187739.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1692 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 8 ccgccgccgcagccatggcc 27
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 gctcggggtcgagtcgctgg 489 |||||||||||||||||||| Sbjct: 4528638 gctcggggtcgagtcgctgg 4528619
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ccggctccctcgccgccgtcgccg 387 |||||||| ||||||||||||||| Sbjct: 89000 ccggctccgtcgccgccgtcgccg 88977
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgcggccgtcaagagcgcg 152 |||||||||||||||||||| Sbjct: 2813844 gcgcggccgtcaagagcgcg 2813825 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gctcgccccgctcgcgccgctcgg 475 ||||||| |||||||||||||||| Sbjct: 2161663 gctcgccgcgctcgcgccgctcgg 2161686
>ref|XM_957894.1| Neurospora crassa OR74A hypothetical protein (NCU06175.1) partial mRNA Length = 1872 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gcgtgggagagggccatcagcgcg 137 ||||||||||||||||| |||||| Sbjct: 1804 gcgtgggagagggccatgagcgcg 1827
>ref|XM_326029.1| Neurospora crassa OR74A hypothetical protein (NCU06175.1) partial mRNA Length = 1872 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 gcgtgggagagggccatcagcgcg 137 ||||||||||||||||| |||||| Sbjct: 1804 gcgtgggagagggccatgagcgcg 1827
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgcggccgtcaagagcgcg 152 |||||||||||||||||||| Sbjct: 4041360 gcgcggccgtcaagagcgcg 4041341 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gctcgccccgctcgcgccgctcgg 475 ||||||| |||||||||||||||| Sbjct: 3546482 gctcgccgcgctcgcgccgctcgg 3546505
>gb|AE009222.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 248 of 256 of the complete sequence Length = 12589 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 tgtcgatgccgagggcaatg 594 |||||||||||||||||||| Sbjct: 691 tgtcgatgccgagggcaatg 672
>gb|DQ177150.1| Oncorhynchus mykiss alpha-1D adrenoreceptor mRNA, complete cds Length = 1633 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 ccgccgtcgccgagtcctgcggcg 399 |||||| ||||||||||||||||| Sbjct: 1162 ccgccgccgccgagtcctgcggcg 1185
>gb|AF543198.1| Hordeum vulgare subsp. vulgare phosphate transporter 6 (Pht1-6) gene, complete cds Length = 2876 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ctcgctcgaggagctctccg 273 |||||||||||||||||||| Sbjct: 2446 ctcgctcgaggagctctccg 2465
>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017D19, complete sequence Length = 142015 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgccgctctcccccttctcc 170 |||||||||||||||||||| Sbjct: 56404 cgccgctctcccccttctcc 56423
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 accgcttcgccgccgtcgag 449 |||||||||||||||||||| Sbjct: 50586 accgcttcgccgccgtcgag 50567
>gb|AC004448.4| Homo sapiens chromosome 17, clone CTB-187M2, complete sequence Length = 149157 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 tgcgctggttcccagcttga 561 |||||||||||||||||||| Sbjct: 61965 tgcgctggttcccagcttga 61946
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ccgagtcctgcggcgggacc 404 |||||||||||||||||||| Sbjct: 2487369 ccgagtcctgcggcgggacc 2487350
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ccgagtcctgcggcgggacc 404 |||||||||||||||||||| Sbjct: 3233732 ccgagtcctgcggcgggacc 3233713
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 gcgcggccgtcaagagcgcg 152 |||||||||||||||||||| Sbjct: 3747958 gcgcggccgtcaagagcgcg 3747939 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 452 gctcgccccgctcgcgccgctcgg 475 ||||||| |||||||||||||||| Sbjct: 3287782 gctcgccgcgctcgcgccgctcgg 3287805
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ccggggccggctccctcgcc 377 |||||||||||||||||||| Sbjct: 12634 ccggggccggctccctcgcc 12653
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 gccggcgccggagaggacgacgcggcgt 117 |||||||||| |||||||||||||||| Sbjct: 253061 gccggcgccgtcgaggacgacgcggcgt 253034
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctccctcgccgccgtcgccg 387 |||||||||||||||||||| Sbjct: 238301 ctccctcgccgccgtcgccg 238282
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccccgct 463 ||||||||| ||||||||||||| |||| Sbjct: 45825 tcgccgccgacgaggagctcgccacgct 45852
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 tgtcgatgccgagggcaatg 594 |||||||||||||||||||| Sbjct: 2742716 tgtcgatgccgagggcaatg 2742697
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 66 accacccccgccgccgcagccatggccggcgc 97 ||||||||||||||| | || ||||||||||| Sbjct: 3030352 accacccccgccgcctcggcgatggccggcgc 3030383
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccccgct 463 ||||||||| ||||||||||||| |||| Sbjct: 46018 tcgccgccgacgaggagctcgccacgct 46045
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccccgct 463 ||||||||| ||||||||||||| |||| Sbjct: 33614765 tcgccgccgacgaggagctcgccacgct 33614792
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgccgctctcccccttctcc 170 |||||||||||||||||||| Sbjct: 22625618 cgccgctctcccccttctcc 22625637 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ccggctccctcgccgccgtcgccg 387 |||||||| ||||||||||||||| Sbjct: 11302642 ccggctccgtcgccgccgtcgccg 11302619
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccc 459 |||||||| ||||||||||||||| Sbjct: 27984549 tcgccgccttcgaggagctcgccc 27984572 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggccggcg 96 |||||||||| ||||||||||||| Sbjct: 4716359 ccgccgccgccgccatggccggcg 4716382
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 10290040 ccgccgccgcagccatggcc 10290059 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 2260761 ccgccgccgcagccatggcc 2260742 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctccctcgccgccgtcgccg 387 |||||||||||||||||||| Sbjct: 537279 ctccctcgccgccgtcgccg 537260
>gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164595 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 gcagccatggccggcgccgg 100 |||||||||||||||||||| Sbjct: 20386 gcagccatggccggcgccgg 20405
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctc 455 |||||||||||||||||||| Sbjct: 885949 tcgccgccgtcgaggagctc 885968
>gb|AE004704.1| Pseudomonas aeruginosa PAO1, section 265 of 529 of the complete genome Length = 10171 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 388 agtcctgcggcgggaccatccgcc 411 ||||||||||||| |||||||||| Sbjct: 2577 agtcctgcggcggcaccatccgcc 2600
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 155354 ccgccgccgcagccatggcc 155373
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 105792 agccatggccgccgccggagagga 105769
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ccgagtcctgcggcgggacc 404 |||||||||||||||||||| Sbjct: 5492608 ccgagtcctgcggcgggacc 5492589
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggccggcg 96 |||||||||| ||||||||||||| Sbjct: 3406096 ccgccgccgccgccatggccggcg 3406119
>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_A08 Length = 119304 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccc 459 |||||||| ||||||||||||||| Sbjct: 28211 tcgccgccttcgaggagctcgccc 28234
>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0019D06 Length = 167405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 44345 ccgccgccgcagccatggcc 44326
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctccctcgccgccgtcgccg 387 |||||||||||||||||||| Sbjct: 177480 ctccctcgccgccgtcgccg 177461
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 ctccctcgccgccgtcgccg 387 |||||||||||||||||||| Sbjct: 11884 ctccctcgccgccgtcgccg 11865
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 436 tcgccgccgtcgaggagctcgccc 459 |||||||| ||||||||||||||| Sbjct: 112001 tcgccgccttcgaggagctcgccc 112024
>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453G03 Length = 144480 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 46946 agccatggccgccgccggagagga 46923 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 44465 agccatggccgccgccggagagga 44442
>dbj|AP004066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1572_F02 Length = 93626 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggccggcg 96 |||||||||| ||||||||||||| Sbjct: 88431 ccgccgccgccgccatggccggcg 88454
>gb|AE005003.1| Halobacterium sp. NRC-1 section 34 of 170 of the complete genome Length = 14379 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 accgcttcgccgccgtcgag 449 |||||||||||||||||||| Sbjct: 3999 accgcttcgccgccgtcgag 4018
>dbj|AK108520.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-B03, full insert sequence Length = 896 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 83 agccatggccggcgccggagagga 106 ||||||||||| |||||||||||| Sbjct: 169 agccatggccgccgccggagagga 192
>dbj|AK070848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068G12, full insert sequence Length = 2559 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 262 ccgccgccgcagccatggcc 243
>dbj|AK063433.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D12, full insert sequence Length = 2711 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggccggcg 96 |||||||||| ||||||||||||| Sbjct: 2193 ccgccgccgccgccatggccggcg 2216
>gb|AY103969.1| Zea mays PCO120069 mRNA sequence Length = 664 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 cccgccgccgcagccatggc 91 |||||||||||||||||||| Sbjct: 123 cccgccgccgcagccatggc 142
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gccgccgtcgaggagctcgc 457 |||||||||||||||||||| Sbjct: 92764 gccgccgtcgaggagctcgc 92745
>gb|M80346.1|STMCARA Streptomyces thermotolerans carbomycin resistance protein (carA) gene, complete cds Length = 2393 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccctcttcgaccgcttcccc 254 |||||||||||||||||||| Sbjct: 2230 ccctcttcgaccgcttcccc 2211
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cgccgctctcccccttctcc 170 |||||||||||||||||||| Sbjct: 22935529 cgccgctctcccccttctcc 22935548 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 ccggctccctcgccgccgtcgccg 387 |||||||| ||||||||||||||| Sbjct: 11381831 ccggctccgtcgccgccgtcgccg 11381808
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 gccggctccctcgccgccgtcgcc 386 ||||||||||||||||||| |||| Sbjct: 91436 gccggctccctcgccgccgccgcc 91459
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 363 gccggctccctcgccgccgtcgcc 386 ||||||||||||||||||| |||| Sbjct: 17874 gccggctccctcgccgccgccgcc 17897
>emb|AJ555213.1|BTA555213 Bos taurus partial IGFBP2 gene for insulin-like growth factor binding protein 2, exon 1 and promoter region Length = 1300 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ccacccccgccgccgcagcc 86 |||||||||||||||||||| Sbjct: 1098 ccacccccgccgccgcagcc 1079
>dbj|D30759.1|STMACYA Streptomyces thermotolerans genes for macrolide-resistance determinant (partial cds), cytochrome P-450 protein (complete cds), macrolide antibiotics 3-O-acyltransferase (complete cds) and carbomycin 4-O-metyltransferase (partial cds) Length = 3267 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 ccctcttcgaccgcttcccc 254 |||||||||||||||||||| Sbjct: 357 ccctcttcgaccgcttcccc 338
>dbj|AB057771.1| Oryza sativa (japonica cultivar-group) PPOX-I/Protox-I gene for protoporphyrinogen oxidase I, complete cds Length = 5441 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 950 ccgccgccgcagccatggcc 969
>dbj|AB057749.1| Oryza sativa (japonica cultivar-group) PPOX-I/Protox-I mRNA for protoporphyrinogen oxidase I, complete cds Length = 1923 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccgccgccgcagccatggcc 92 |||||||||||||||||||| Sbjct: 69 ccgccgccgcagccatggcc 88 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,490,031 Number of Sequences: 3902068 Number of extensions: 3490031 Number of successful extensions: 101496 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 104 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 95194 Number of HSP's gapped (non-prelim): 6303 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)