ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK069013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 5e-75
2dbj|AK061463.1| Oryza sativa (japonica cultivar-group) cDNA clon... 289 5e-75
3gb|AY105954.1| Zea mays PCO090799 mRNA sequence 266 7e-68
4ref|XM_472941.1| Oryza sativa (japonica cultivar-group), predic... 230 4e-57
5emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4,... 123 7e-25
6emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4,... 123 7e-25
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 123 7e-25
8emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 123 7e-25
9gb|AY112304.1| Zea mays CL10114_1 mRNA sequence 46 0.12
10gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, comp... 44 0.49
11gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.9
12gb|AY205337.1| Mycobacterium smegmatis fatty acid synthetase I (... 42 1.9
13gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence 42 1.9
14gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome ... 42 1.9
15emb|CR974467.8| Pig DNA sequence from clone CH242-235B3 on chrom... 42 1.9
16emb|BX060254.1|CNS09INM Single read from an extremity of a full-... 42 1.9
17gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosom... 42 1.9
18emb|AL773568.19| Mouse DNA sequence from clone RP23-59L23 on chr... 42 1.9
19gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 7.6
20ref|NM_191261.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
21gb|AC107692.7| Mus musculus chromosome 3, clone RP24-387H23, com... 40 7.6
22ref|XM_366387.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.6
23ref|XM_422050.1| PREDICTED: Gallus gallus similar to BC038286 pr... 40 7.6
24gb|BT025351.1| Bos taurus leptin receptor overlapping transcript... 40 7.6
25gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, co... 40 7.6
26gb|AC125054.4| Mus musculus BAC clone RP23-389M1 from chromosome... 40 7.6
27emb|AL132839.1|SPAC1093 S.pombe chromosome I cosmid c1093 40 7.6
28gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, co... 40 7.6
29emb|AL390793.9| Human DNA sequence from clone RP13-192B13 on chr... 40 7.6
30emb|Z99259.1|SPAC2C4 S.pombe chromosome I cosmid c2C4 40 7.6
31gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, comp... 40 7.6
32emb|CR523026.1| Gallus gallus finished cDNA, clone ChEST894g11 40 7.6
33gb|AC160062.6| Mus musculus 6 BAC RP23-427I18 (Roswell Park Canc... 40 7.6
34ref|NM_001020082.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.6
35ref|NM_001019948.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.6
36gb|BC108155.1| Bos taurus cDNA clone MGC:133536 IMAGE:8050701, c... 40 7.6
37dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
39ref|XM_397439.2| PREDICTED: Apis mellifera similar to CG9805-PA ... 40 7.6
40gb|AC138466.12| Homo sapiens 12 BAC RP13-977J11 (Roswell Park Ca... 40 7.6
41gb|AC155649.4| Mus musculus 6 BAC RP24-234M19 (Roswell Park Canc... 40 7.6
42gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome ... 40 7.6
43gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome... 40 7.6
44gb|AF038409.2|AF038409 Leishmania amazonensis arginase gene, com... 40 7.6
45dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
46dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
47dbj|AK107030.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
48gb|AC102905.9| Mus musculus chromosome 15, clone RP24-303N12, co... 40 7.6
49gb|AF041468.1| Guillardia theta complete plastid genome 40 7.6
50gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.6
51emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.6
52emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.6
53dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 7.6
54ref|NM_001037462.1| Bos taurus similar to leptin receptor overla... 40 7.6
55gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Rosw... 40 7.6
56dbj|AB006784.1| Schizosaccharomyces pombe DNA for cytoplasmic dy... 40 7.6 
>dbj|AK069013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001P21, full
           insert sequence
          Length = 1262

 Score =  289 bits (146), Expect = 5e-75
 Identities = 314/370 (84%)
 Strand = Plus / Plus

                                                                       
Query: 179 catgagatccggatattttcaagcacaacatttgagctgatgactagcaaattgcccagg 238
           |||||| ||||  ||||||||||   ||||||||||   ||||||||||| ||||||   
Sbjct: 236 catgagttccgagtattttcaagtgtaacatttgagtcaatgactagcaacttgcccgca 295

                                                                       
Query: 239 gcagatcaggaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttg 298
           ||||||||||||||||  ||||||||||||||||||||||||| ||| |||| ||| |||
Sbjct: 296 gcagatcaggaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttg 355

                                                                       
Query: 299 atttccaataggcttgcggaacaatcgaaagttctgaagactcgtaaaataagggaagca 358
            |||| || ||  | |  ||||||||||||||| ||||||||||||||||  | ||||||
Sbjct: 356 gtttcgaacagaataggagaacaatcgaaagttttgaagactcgtaaaatgcgtgaagca 415

                                                                       
Query: 359 gaacttgctgctcaacgagcaaggctaacaaaggcagtgatgagggttcgattccctgat 418
           ||||||||||| |||||||||| | ||| ||||||||| |||||||| ||||||||||||
Sbjct: 416 gaacttgctgcccaacgagcaaagataaaaaaggcagtaatgagggtgcgattccctgat 475

                                                                       
Query: 419 ggttacattcttgaggttgagtttcatccatcagagacagtacatagtctgttggatctt 478
           || ||||| |||||||  || |||||||| ||||| ||||| || |||||| ||||| ||
Sbjct: 476 ggatacatacttgaggccgattttcatccgtcagaaacagttcaaagtctgatggatttt 535

                                                                       
Query: 479 ctcatgaaagtaattgctagaccagacctgccattctatctttacacagttcctccaaag 538
           || | |||||||||  ||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 536 ctgaagaaagtaatctctagaccagacctgccattctatctctatacagttccaccaaag 595

                     
Query: 539 aagcgaataa 548
           ||||| ||||
Sbjct: 596 aagcggataa 605
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>dbj|AK061463.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B12, full
           insert sequence
          Length = 1130

 Score =  289 bits (146), Expect = 5e-75
 Identities = 314/370 (84%)
 Strand = Plus / Plus

                                                                       
Query: 179 catgagatccggatattttcaagcacaacatttgagctgatgactagcaaattgcccagg 238
           |||||| ||||  ||||||||||   ||||||||||   ||||||||||| ||||||   
Sbjct: 222 catgagttccgagtattttcaagtgtaacatttgagtcaatgactagcaacttgcccgca 281

                                                                       
Query: 239 gcagatcaggaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttg 298
           ||||||||||||||||  ||||||||||||||||||||||||| ||| |||| ||| |||
Sbjct: 282 gcagatcaggaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttg 341

                                                                       
Query: 299 atttccaataggcttgcggaacaatcgaaagttctgaagactcgtaaaataagggaagca 358
            |||| || ||  | |  ||||||||||||||| ||||||||||||||||  | ||||||
Sbjct: 342 gtttcgaacagaataggagaacaatcgaaagttttgaagactcgtaaaatgcgtgaagca 401

                                                                       
Query: 359 gaacttgctgctcaacgagcaaggctaacaaaggcagtgatgagggttcgattccctgat 418
           ||||||||||| |||||||||| | ||| ||||||||| |||||||| ||||||||||||
Sbjct: 402 gaacttgctgcccaacgagcaaagataaaaaaggcagtaatgagggtgcgattccctgat 461

                                                                       
Query: 419 ggttacattcttgaggttgagtttcatccatcagagacagtacatagtctgttggatctt 478
           || ||||| |||||||  || |||||||| ||||| ||||| || |||||| ||||| ||
Sbjct: 462 ggatacatacttgaggccgattttcatccgtcagaaacagttcaaagtctgatggatttt 521

                                                                       
Query: 479 ctcatgaaagtaattgctagaccagacctgccattctatctttacacagttcctccaaag 538
           || | |||||||||  ||||||||||||||||||||||||| || |||||||| ||||||
Sbjct: 522 ctgaagaaagtaatctctagaccagacctgccattctatctctatacagttccaccaaag 581

                     
Query: 539 aagcgaataa 548
           ||||| ||||
Sbjct: 582 aagcggataa 591
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>gb|AY105954.1| Zea mays PCO090799 mRNA sequence
          Length = 973

 Score =  266 bits (134), Expect = 7e-68
 Identities = 275/322 (85%)
 Strand = Plus / Plus

                                                                       
Query: 239 gcagatcaggaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttg 298
           |||||||| |||||||| || |||||||||||||||||||||| |||||| ||||| |||
Sbjct: 255 gcagatcatgaggaaggtgacgacttttatgagcttcagcctgctgattactacaacttg 314

                                                                       
Query: 299 atttccaataggcttgcggaacaatcgaaagttctgaagactcgtaaaataagggaagca 358
           ||||| || ||| | |  || | ||| ||| | || |||||||| || ||  ||||||||
Sbjct: 315 atttcaaacaggatgggagagctatccaaaatgctaaagactcgcaagatgcgggaagca 374

                                                                       
Query: 359 gaacttgctgctcaacgagcaaggctaacaaaggcagtgatgagggttcgattccctgat 418
           |||||||||||||| ||||||| || |||||||||||| |||||||| ||||||||||||
Sbjct: 375 gaacttgctgctcagcgagcaaagcgaacaaaggcagtaatgagggtgcgattccctgat 434

                                                                       
Query: 419 ggttacattcttgaggttgagtttcatccatcagagacagtacatagtctgttggatctt 478
           || ||||| ||||||| ||| |||| |||||||||||   | ||||||||  |||| || 
Sbjct: 435 ggctacatacttgaggctgactttcttccatcagagaggattcatagtctagtggacctg 494

                                                                       
Query: 479 ctcatgaaagtaattgctagaccagacctgccattctatctttacacagttcctccaaag 538
           |||||||||||| ||||||||||||| |||||||||||||| || ||||| |||||||||
Sbjct: 495 ctcatgaaagtacttgctagaccagatctgccattctatctctatacagtacctccaaag 554

                                 
Query: 539 aagcgaataatggacacctcac 560
           ||||||||| ||||||| ||||
Sbjct: 555 aagcgaatactggacacatcac 576



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 149 aagctgaaagcagtgggacaagagcttggacatgagatccggatattttcaag 201
           |||||||||||||||  | | || |||||||||||||||||| | ||||||||
Sbjct: 165 aagctgaaagcagtgtcagaggaacttggacatgagatccgggttttttcaag 217
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>ref|XM_472941.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 927

 Score =  230 bits (116), Expect = 4e-57
 Identities = 203/232 (87%)
 Strand = Plus / Plus

                                                                       
Query: 317 gaacaatcgaaagttctgaagactcgtaaaataagggaagcagaacttgctgctcaacga 376
           ||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||
Sbjct: 403 gaacaatcgaaagttttgaagactcgtaaaatgcgtgaagcagaacttgctgcccaacga 462

                                                                       
Query: 377 gcaaggctaacaaaggcagtgatgagggttcgattccctgatggttacattcttgaggtt 436
           |||| | ||| ||||||||| |||||||| |||||||||||||| ||||| |||||||  
Sbjct: 463 gcaaagataaaaaaggcagtaatgagggtgcgattccctgatggatacatacttgaggcc 522

                                                                       
Query: 437 gagtttcatccatcagagacagtacatagtctgttggatcttctcatgaaagtaattgct 496
           || |||||||| ||||| ||||| || |||||| ||||| |||| | |||||||||  ||
Sbjct: 523 gattttcatccgtcagaaacagttcaaagtctgatggattttctgaagaaagtaatctct 582

                                                               
Query: 497 agaccagacctgccattctatctttacacagttcctccaaagaagcgaataa 548
           ||||||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 583 agaccagacctgccattctatctctatacagttccaccaaagaagcggataa 634



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 105/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 179 catgagatccggatattttcaagcacaacatttgagctgatgactagcaaattgcccagg 238
           |||||| ||||  ||||||||||   ||||||||||   ||||||||||| ||||||   
Sbjct: 235 catgagttccgagtattttcaagtgtaacatttgagtcaatgactagcaacttgcccgca 294

                                                                       
Query: 239 gcagatcaggaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttg 298
           ||||||||||||||||  ||||||||||||||||||||||||| ||| |||| ||| |||
Sbjct: 295 gcagatcaggaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttg 354

                
Query: 299 atttc 303
            ||||
Sbjct: 355 gtttc 359
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>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09,
             complete sequence
          Length = 120583

 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                         
Query: 390   aggcagtgatgagggttcgattccctgatggttacattcttgaggttgagtttcatccat 449
             ||||||| |||||||| |||||||||||||| ||||| |||||||  || |||||||| |
Sbjct: 52771 aggcagtaatgagggtgcgattccctgatggatacatacttgaggccgattttcatccgt 52830

                                                                         
Query: 450   cagagacagtacatagtctgttggatcttctcatgaaagtaattgctagaccagacctgc 509
             |||| ||||| || |||||| ||||| |||| | |||||||||  |||||||||||||||
Sbjct: 52831 cagaaacagttcaaagtctgatggattttctgaagaaagtaatctctagaccagacctgc 52890

                       
Query: 510   cattctatct 519
             ||||||||||
Sbjct: 52891 cattctatct 52900



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                         
Query: 317   gaacaatcgaaagttctgaagactcgtaaaataagggaagcagaacttgctgctcaacga 376
             ||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||
Sbjct: 52600 gaacaatcgaaagttttgaagactcgtaaaatgcgtgaagcagaacttgctgcccaacga 52659

                 
Query: 377   gcaa 380
             ||||
Sbjct: 52660 gcaa 52663



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 248   gaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttgatttc 303
             |||||||  ||||||||||||||||||||||||| ||| |||| ||| ||| ||||
Sbjct: 52412 gaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttggtttc 52467
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>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15,
              complete sequence
          Length = 150864

 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                          
Query: 390    aggcagtgatgagggttcgattccctgatggttacattcttgaggttgagtttcatccat 449
              ||||||| |||||||| |||||||||||||| ||||| |||||||  || |||||||| |
Sbjct: 119584 aggcagtaatgagggtgcgattccctgatggatacatacttgaggccgattttcatccgt 119643

                                                                          
Query: 450    cagagacagtacatagtctgttggatcttctcatgaaagtaattgctagaccagacctgc 509
              |||| ||||| || |||||| ||||| |||| | |||||||||  |||||||||||||||
Sbjct: 119644 cagaaacagttcaaagtctgatggattttctgaagaaagtaatctctagaccagacctgc 119703

                        
Query: 510    cattctatct 519
              ||||||||||
Sbjct: 119704 cattctatct 119713



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                          
Query: 317    gaacaatcgaaagttctgaagactcgtaaaataagggaagcagaacttgctgctcaacga 376
              ||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||
Sbjct: 119413 gaacaatcgaaagttttgaagactcgtaaaatgcgtgaagcagaacttgctgcccaacga 119472

                  
Query: 377    gcaa 380
              ||||
Sbjct: 119473 gcaa 119476



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                      
Query: 248    gaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttgatttc 303
              |||||||  ||||||||||||||||||||||||| ||| |||| ||| ||| ||||
Sbjct: 119225 gaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttggtttc 119280
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                            
Query: 390      aggcagtgatgagggttcgattccctgatggttacattcttgaggttgagtttcatccat 449
                ||||||| |||||||| |||||||||||||| ||||| |||||||  || |||||||| |
Sbjct: 24230359 aggcagtaatgagggtgcgattccctgatggatacatacttgaggccgattttcatccgt 24230418

                                                                            
Query: 450      cagagacagtacatagtctgttggatcttctcatgaaagtaattgctagaccagacctgc 509
                |||| ||||| || |||||| ||||| |||| | |||||||||  |||||||||||||||
Sbjct: 24230419 cagaaacagttcaaagtctgatggattttctgaagaaagtaatctctagaccagacctgc 24230478

                          
Query: 510      cattctatct 519
                ||||||||||
Sbjct: 24230479 cattctatct 24230488



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                            
Query: 317      gaacaatcgaaagttctgaagactcgtaaaataagggaagcagaacttgctgctcaacga 376
                ||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||
Sbjct: 24230188 gaacaatcgaaagttttgaagactcgtaaaatgcgtgaagcagaacttgctgcccaacga 24230247

                    
Query: 377      gcaa 380
                ||||
Sbjct: 24230248 gcaa 24230251



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                        
Query: 248      gaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttgatttc 303
                |||||||  ||||||||||||||||||||||||| ||| |||| ||| ||| ||||
Sbjct: 24230000 gaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttggtttc 24230055
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>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete
             sequence
          Length = 59348

 Score =  123 bits (62), Expect = 7e-25
 Identities = 113/130 (86%)
 Strand = Plus / Plus

                                                                         
Query: 390   aggcagtgatgagggttcgattccctgatggttacattcttgaggttgagtttcatccat 449
             ||||||| |||||||| |||||||||||||| ||||| |||||||  || |||||||| |
Sbjct: 25075 aggcagtaatgagggtgcgattccctgatggatacatacttgaggccgattttcatccgt 25134

                                                                         
Query: 450   cagagacagtacatagtctgttggatcttctcatgaaagtaattgctagaccagacctgc 509
             |||| ||||| || |||||| ||||| |||| | |||||||||  |||||||||||||||
Sbjct: 25135 cagaaacagttcaaagtctgatggattttctgaagaaagtaatctctagaccagacctgc 25194

                       
Query: 510   cattctatct 519
             ||||||||||
Sbjct: 25195 cattctatct 25204



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                         
Query: 317   gaacaatcgaaagttctgaagactcgtaaaataagggaagcagaacttgctgctcaacga 376
             ||||||||||||||| ||||||||||||||||  | ||||||||||||||||| ||||||
Sbjct: 24904 gaacaatcgaaagttttgaagactcgtaaaatgcgtgaagcagaacttgctgcccaacga 24963

                 
Query: 377   gcaa 380
             ||||
Sbjct: 24964 gcaa 24967



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                     
Query: 248   gaggaaggcgatgacttttatgagcttcagcctggtgattattacaagttgatttc 303
             |||||||  ||||||||||||||||||||||||| ||| |||| ||| ||| ||||
Sbjct: 24716 gaggaagatgatgacttttatgagcttcagcctgctgactatttcaacttggtttc 24771
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>gb|AY112304.1| Zea mays CL10114_1 mRNA sequence
          Length = 499

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 261 acttttatgagcttcagcctggtgattattacaagttga 299
           ||||||||||||| ||||||| |||||| ||||| ||||
Sbjct: 382 acttttatgagctccagcctgctgattactacaacttga 344
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>gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, complete sequence
          Length = 171637

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 238    ggcagatcaggaggaaggcgatgact 263
              ||||||||||||||||||| ||||||
Sbjct: 142807 ggcagatcaggaggaaggcaatgact 142832
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 31      ctgctccaggcgccggaaaagggaggagg 59
               |||||||||||||||||||  ||||||||
Sbjct: 3475917 ctgctccaggcgccggaaataggaggagg 3475945
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>gb|AY205337.1| Mycobacterium smegmatis fatty acid synthetase I (fas1) and acyl
            carrier protein synthetase (acpS) genes, complete cds
          Length = 10279

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 115  gccggagcagcaggcgccgcctcgg 139
            |||| ||||||||||||||||||||
Sbjct: 5859 gccgcagcagcaggcgccgcctcgg 5835
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>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence
          Length = 146078

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 249    aggaaggcgatgacttttatg 269
              |||||||||||||||||||||
Sbjct: 135221 aggaaggcgatgacttttatg 135241
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>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence
          Length = 214085

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 47     aaaagggaggaggacgagggaggga 71
              |||||||||||||| ||||||||||
Sbjct: 107874 aaaagggaggaggaggagggaggga 107850
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>emb|CR974467.8| Pig DNA sequence from clone CH242-235B3 on chromosome 17, complete
              sequence
          Length = 158975

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 16     aaaccctctccgcctctgctc 36
              |||||||||||||||||||||
Sbjct: 152166 aaaccctctccgcctctgctc 152146
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>emb|BX060254.1|CNS09INM Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC40CC01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 982

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 291 acaagttgatttccaataggc 311
           |||||||||||||||||||||
Sbjct: 911 acaagttgatttccaataggc 931
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>gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosome 13, complete sequence
          Length = 164331

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 47     aaaagggaggaggacgagggaggga 71
              |||||||||||||| ||||||||||
Sbjct: 150602 aaaagggaggaggaggagggaggga 150626
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>emb|AL773568.19| Mouse DNA sequence from clone RP23-59L23 on chromosome X, complete
              sequence
          Length = 158374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 194    ttttcaagcacaacatttgag 214
              |||||||||||||||||||||
Sbjct: 149521 ttttcaagcacaacatttgag 149501
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 27      gcctctgctccaggcgccgg 46
               ||||||||||||||||||||
Sbjct: 1486497 gcctctgctccaggcgccgg 1486478
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>ref|NM_191261.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  cgacgaggaggagacgcggc 116
           ||||||||||||||||||||
Sbjct: 564 cgacgaggaggagacgcggc 545
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>gb|AC107692.7| Mus musculus chromosome 3, clone RP24-387H23, complete sequence
          Length = 148965

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   agggcagatcaggaggaagg 255
             ||||||||||||||||||||
Sbjct: 45574 agggcagatcaggaggaagg 45593
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>ref|XM_366387.1| Magnaporthe grisea 70-15 hypothetical protein (MG10605.4) partial
           mRNA
          Length = 2091

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 cgccgcctcgggtcccggag 148
           ||||||||||||||||||||
Sbjct: 930 cgccgcctcgggtcccggag 911
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>ref|XM_422050.1| PREDICTED: Gallus gallus similar to BC038286 protein (LOC424203),
            mRNA
          Length = 1872

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  aggaggaaggcgatgacttt 265
            ||||||||||||||||||||
Sbjct: 1266 aggaggaaggcgatgacttt 1285
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>gb|BT025351.1| Bos taurus leptin receptor overlapping transcript-like 1
           (LEPROTL1), mRNA, complete cds
          Length = 656

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 cgccgcctcgggtcccggag 148
           ||||||||||||||||||||
Sbjct: 21  cgccgcctcgggtcccggag 40
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>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence
          Length = 152173

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   aatcgaaagttctgaagact 340
             ||||||||||||||||||||
Sbjct: 53408 aatcgaaagttctgaagact 53427
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>gb|AC125054.4| Mus musculus BAC clone RP23-389M1 from chromosome 15, complete sequence
          Length = 188536

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gcttggacatgagatccgga 191
             ||||||||||||||||||||
Sbjct: 52786 gcttggacatgagatccgga 52805
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>emb|AL132839.1|SPAC1093 S.pombe chromosome I cosmid c1093
          Length = 18576

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   tattttcaagcacaacattt 211
             ||||||||||||||||||||
Sbjct: 14216 tattttcaagcacaacattt 14235
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>gb|AC102633.7| Mus musculus chromosome 15, clone RP23-326O18, complete sequence
          Length = 225738

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gcttggacatgagatccgga 191
              ||||||||||||||||||||
Sbjct: 187385 gcttggacatgagatccgga 187404
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>emb|AL390793.9| Human DNA sequence from clone RP13-192B13 on chromosome X, complete
             sequence
          Length = 85382

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   aacaaaggcagtgatgaggg 404
             ||||||||||||||||||||
Sbjct: 58848 aacaaaggcagtgatgaggg 58829
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>emb|Z99259.1|SPAC2C4 S.pombe chromosome I cosmid c2C4
          Length = 35000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   tgatggttacattcttgagg 434
             ||||||||||||||||||||
Sbjct: 25960 tgatggttacattcttgagg 25941
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>gb|AC104445.2| Homo sapiens chromosome 3 clone RP11-444P10, complete sequence
          Length = 201218

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   cggagcagcaggcgccgcct 136
             ||||||||||||||||||||
Sbjct: 90960 cggagcagcaggcgccgcct 90941
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>emb|CR523026.1| Gallus gallus finished cDNA, clone ChEST894g11
          Length = 974

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 246 aggaggaaggcgatgacttt 265
           ||||||||||||||||||||
Sbjct: 347 aggaggaaggcgatgacttt 366
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>gb|AC160062.6| Mus musculus 6 BAC RP23-427I18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 169540

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 49     aagggaggaggacgagggagggat 72
              |||||||||||| |||||||||||
Sbjct: 152467 aagggaggaggaggagggagggat 152490
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>ref|NM_001020082.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC1093.06c),
             partial mRNA
          Length = 12591

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tattttcaagcacaacattt 211
             ||||||||||||||||||||
Sbjct: 11281 tattttcaagcacaacattt 11262
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>ref|NM_001019948.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC2C4.16c),
           partial mRNA
          Length = 603

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 tgatggttacattcttgagg 434
           ||||||||||||||||||||
Sbjct: 537 tgatggttacattcttgagg 556
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>gb|BC108155.1| Bos taurus cDNA clone MGC:133536 IMAGE:8050701, complete cds
          Length = 705

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 cgccgcctcgggtcccggag 148
           ||||||||||||||||||||
Sbjct: 59  cgccgcctcgggtcccggag 78
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 50       agggaggaggacgagggagggatcgagc 77
                ||||||||||| |||| |||||||||||
Sbjct: 23348509 agggaggaggaggaggaagggatcgagc 23348536
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 97       cgacgaggaggagacgcggc 116
                ||||||||||||||||||||
Sbjct: 31600780 cgacgaggaggagacgcggc 31600799
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>ref|XM_397439.2| PREDICTED: Apis mellifera similar to CG9805-PA (LOC414004), mRNA
          Length = 3075

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  cttgaggttgagtttcatcc 447
            ||||||||||||||||||||
Sbjct: 1186 cttgaggttgagtttcatcc 1205
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>gb|AC138466.12| Homo sapiens 12 BAC RP13-977J11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 129492

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ggaggaggacgagggaggga 71
              ||||||||||||||||||||
Sbjct: 101753 ggaggaggacgagggaggga 101734
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>gb|AC155649.4| Mus musculus 6 BAC RP24-234M19 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 152831

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    aagggaggaggacgagggagggat 72
             |||||||||||| |||||||||||
Sbjct: 37509 aagggaggaggaggagggagggat 37532
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>gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome 16, complete sequence
          Length = 256130

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     ccaaataaaccctctccgcc 29
              ||||||||||||||||||||
Sbjct: 205545 ccaaataaaccctctccgcc 205526
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>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete
            sequence
          Length = 176299

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   ccaaataaaccctctccgcc 29
            ||||||||||||||||||||
Sbjct: 7076 ccaaataaaccctctccgcc 7057
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>gb|AF038409.2|AF038409 Leishmania amazonensis arginase gene, complete cds
          Length = 6374

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 48   aaagggaggaggacgagggagggatcga 75
            ||||||||||||| ||||| ||||||||
Sbjct: 3800 aaagggaggaggaggagggggggatcga 3773
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>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503C12
          Length = 147180

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    cgacgaggaggagacgcggc 116
             ||||||||||||||||||||
Sbjct: 14512 cgacgaggaggagacgcggc 14531
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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435B05
          Length = 150997

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     cgacgaggaggagacgcggc 116
              ||||||||||||||||||||
Sbjct: 113803 cgacgaggaggagacgcggc 113822
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>dbj|AK107030.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A11, full
           insert sequence
          Length = 805

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 50  agggaggaggacgagggagggatcgagc 77
           ||||||||||| |||| |||||||||||
Sbjct: 92  agggaggaggaggaggaagggatcgagc 119
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>gb|AC102905.9| Mus musculus chromosome 15, clone RP24-303N12, complete sequence
          Length = 153799

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 321    aatcgaaagttctgaagact 340
              ||||||||||||||||||||
Sbjct: 149373 aatcgaaagttctgaagact 149392
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>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   tgatgagggttcgattccct 415
             ||||||||||||||||||||
Sbjct: 57176 tgatgagggttcgattccct 57157
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 50       agggaggaggacgagggagggatcgagc 77
                ||||||||||| |||| |||||||||||
Sbjct: 23276700 agggaggaggaggaggaagggatcgagc 23276727
to top
>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 50     agggaggaggacgagggagggatcgagc 77
              ||||||||||| |||| |||||||||||
Sbjct: 161627 agggaggaggaggaggaagggatcgagc 161654
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 50     agggaggaggacgagggagggatcgagc 77
              ||||||||||| |||| |||||||||||
Sbjct: 153650 agggaggaggaggaggaagggatcgagc 153623
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 396     tgatgagggttcgattccct 415
               ||||||||||||||||||||
Sbjct: 2781315 tgatgagggttcgattccct 2781296
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>ref|NM_001037462.1| Bos taurus similar to leptin receptor overlapping transcript-like 1
           (predicted) (MGC133536), mRNA
          Length = 705

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 129 cgccgcctcgggtcccggag 148
           ||||||||||||||||||||
Sbjct: 59  cgccgcctcgggtcccggag 78
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>gb|AC011604.10| Homo sapiens 12p12-31.7-37.2 BAC RP11-80N2 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 175606

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   aagctgaaagcagtgggaca 168
             ||||||||||||||||||||
Sbjct: 37066 aagctgaaagcagtgggaca 37085
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>dbj|AB006784.1| Schizosaccharomyces pombe DNA for cytoplasmic dynein heavy chain,
             complete cds
          Length = 14011

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   tattttcaagcacaacattt 211
             ||||||||||||||||||||
Sbjct: 11650 tattttcaagcacaacattt 11631


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,366,471
Number of Sequences: 3902068
Number of extensions: 5366471
Number of successful extensions: 107819
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107455
Number of HSP's gapped (non-prelim): 362
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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