ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart21e10 |
|---|---|
| Clone Library Name | barley_pub |
>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)| (GID1-like protein 3) Length = 344 Score = 85.9 bits (211), Expect = 9e-17 Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 14/158 (8%) Frame = +1 Query: 157 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 336 +PL + ++ A + + R DGT NR L +DR + ANP +GV S+D +D Sbjct: 16 VPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPV---NGVFSFDVIIDR 72 Query: 337 SRGIWARXXXXXXXXXXXXXXX--------------YYHGGGFALFSPAIGPFNGVCRRL 474 + +R ++HGG FA S ++ +CRRL Sbjct: 73 QTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRL 132 Query: 475 CSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLDEA 588 GAVVVSVNYR APE+RYP AYDDG L++++ + Sbjct: 133 VGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNSS 170
>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)| (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) Length = 354 Score = 78.6 bits (192), Expect = 1e-14 Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 23/176 (13%) Frame = +1 Query: 157 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 336 +PL + ++ + + + R+DGT R L +DR + A P GV S+D +D Sbjct: 16 VPLHTWVLISNFKLSYNILRRADGTFERDLGEYLDRRVPANARPL---EGVSSFDHIIDQ 72 Query: 337 SRGIWARXXXXXXXXXXXXXXX-----------------------YYHGGGFALFSPAIG 447 S G+ R ++HGG F S + Sbjct: 73 SVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASST 132 Query: 448 PFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLDEAGVVPGLGDA 615 ++ +CRR VVVSVNYR APEHRYP AYDDG AL+++ + GDA Sbjct: 133 IYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDA 188
>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)| (GID1-like protein 1) Length = 345 Score = 75.9 bits (185), Expect = 9e-14 Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 16/158 (10%) Frame = +1 Query: 157 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 336 +PL + ++ A + + R DGT NR L +DR ++ ANP GV S+D +D Sbjct: 16 VPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPV---DGVFSFDVLIDR 72 Query: 337 SRGIWARXXXXXXXXXXXXXXX----------------YYHGGGFALFSPAIGPFNGVCR 468 + +R ++HGG FA S ++ +CR Sbjct: 73 RINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCR 132 Query: 469 RLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLD 582 RL VVVSVNYR APE+ YP AYDDG AL +++ Sbjct: 133 RLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVN 170
>GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.-.-.-)| (GID1-like protein 2) Length = 358 Score = 72.4 bits (176), Expect = 1e-12 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 17/158 (10%) Frame = +1 Query: 157 LPLGVRLQLAGLTAAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDA 336 +PL + ++ A + R DG+ NR L +DR + + P GV S+D VD+ Sbjct: 16 VPLNTWVLISNFKLAYKVLRRPDGSFNRDLAEFLDRKVPANSFPL---DGVFSFDH-VDS 71 Query: 337 SRGIWARXXXXXXXXXXXXXXX-----------------YYHGGGFALFSPAIGPFNGVC 465 + + R ++HGG F S ++ C Sbjct: 72 TTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFC 131 Query: 466 RRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFL 579 RRL + G VVVSV+YR +PEHRYP AYDDG +AL ++ Sbjct: 132 RRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWV 169
>AAAD_RABIT (Q7M370) Arylacetamide deacetylase (EC 3.1.1.-) (AADAC) (50 kDa| microsomal esterase/N-deacetylase) Length = 398 Score = 56.6 bits (135), Expect = 6e-08 Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 6/72 (8%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRF-- 576 Y HGGG+ + S A+ ++ + RR + VVVS NYRLAPE+ +P ++D DAL++ Sbjct: 108 YIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFL 167 Query: 577 ----LDEAGVVP 600 L++ GV P Sbjct: 168 RQDVLEKYGVDP 179
>AAAD_HUMAN (P22760) Arylacetamide deacetylase (EC 3.1.1.-) (AADAC)| Length = 398 Score = 52.0 bits (123), Expect = 1e-06 Identities = 24/58 (41%), Positives = 38/58 (65%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRF 576 Y HGGG+ + S A+ ++ + R + AVVVS NYRLAP++ +P ++D +ALR+ Sbjct: 108 YIHGGGWCVGSAALSGYDLLSRWTADRLDAVVVSTNYRLAPKYHFPIQFEDVYNALRW 165
>BAH_STRHY (Q01109) Acetyl-hydrolase (EC 3.1.1.-)| Length = 299 Score = 48.9 bits (115), Expect = 1e-05 Identities = 28/67 (41%), Positives = 36/67 (53%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLD 582 Y HGG +AL SP + L GA V++++YR PE +PAA +D V A R L Sbjct: 71 YLHGGSYALGSPQ--SHRHLSSALGDAAGAAVLALHYRRPPESPFPAAVEDAVAAYRMLL 128 Query: 583 EAGVVPG 603 E G PG Sbjct: 129 EQGCPPG 135
>AAAD_MOUSE (Q99PG0) Arylacetamide deacetylase (EC 3.1.1.-) (AADAC)| Length = 397 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/69 (36%), Positives = 39/69 (56%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLD 582 Y HGGG+ L S A ++ + R + AVVVS +Y LAP+H +P ++D +LR+ Sbjct: 107 YIHGGGWCLGSAAHFSYDTLSRWTAHKLDAVVVSTDYGLAPKHHFPRQFEDVYRSLRWFL 166 Query: 583 EAGVVPGLG 609 + V+ G Sbjct: 167 QEDVLEKYG 175
>LIP2_MORS1 (P24484) Lipase 2 (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 433 Score = 47.4 bits (111), Expect = 3e-05 Identities = 24/61 (39%), Positives = 35/61 (57%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLD 582 ++HGGGF + I + C +C+ G VVSV+YR+APE+ P A D + A +L Sbjct: 163 FFHGGGFCIGD--IDTHHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLA 220 Query: 583 E 585 E Sbjct: 221 E 221
>AAAD_RAT (Q9QZH8) Arylacetamide deacetylase (EC 3.1.1.-) (AADAC)| Length = 397 Score = 47.0 bits (110), Expect = 5e-05 Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 1/62 (1%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALR-FL 579 + HGGG+ L S A ++ + RR + AVVVS +Y LAP++ +P ++D +LR FL Sbjct: 107 FIHGGGWCLGSAAYFMYDTLSRRTAHRLDAVVVSTDYGLAPKYHFPKQFEDVYHSLRWFL 166 Query: 580 DE 585 E Sbjct: 167 QE 168
>STCI_EMENI (Q00675) Putative sterigmatocystin biosynthesis lipase/esterase| stcI Length = 286 Score = 44.7 bits (104), Expect = 2e-04 Identities = 24/57 (42%), Positives = 31/57 (54%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALR 573 Y+H GG+ + S I +G R LC + SV YRLAPE R+P A DD + R Sbjct: 52 YFHAGGWVMGS--IDEEDGFVRTLCKLARTRIFSVGYRLAPEFRFPMALDDCLTVAR 106
>EST_ACILW (P18773) Esterase (EC 3.1.1.-)| Length = 303 Score = 38.1 bits (87), Expect = 0.021 Identities = 24/66 (36%), Positives = 31/66 (46%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDALRFLD 582 + HGG F L S + + L S V+ V+Y LAPEH YP A D D + L Sbjct: 77 HIHGGAFFLGS--LNTHRALMTDLASRTQMQVIHVDYPLAPEHPYPEAIDAIFDVYQALL 134 Query: 583 EAGVVP 600 G+ P Sbjct: 135 VQGIKP 140
>AES_ECOLI (P23872) Acetyl esterase (EC 3.1.1.-)| Length = 319 Score = 37.4 bits (85), Expect = 0.036 Identities = 20/55 (36%), Positives = 31/55 (56%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAPEHRYPAAYDDGVDA 567 Y HGGGF L + + + + R L S V+ ++Y L+PE R+P A ++ V A Sbjct: 89 YLHGGGFILGN--LDTHDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAA 141
>ACE4_CAEBR (Q9NDG8) Acetylcholinesterase 4 precursor (EC 3.1.1.7) (AChE 4)| Length = 604 Score = 34.3 bits (77), Expect = 0.30 Identities = 16/41 (39%), Positives = 26/41 (63%) Frame = +1 Query: 403 YYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRLAP 525 ++ GGGF SP++ ++G R L + +VV++NYRL P Sbjct: 134 WFFGGGFYSGSPSLSIYDG--RALAATQHVIVVNINYRLGP 172
>ACES_MYXGL (Q92081) Acetylcholinesterase (EC 3.1.1.7) (AChE) (Fragment)| Length = 338 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = +1 Query: 412 GGGFALFSPAIGPFNGVCRRLCSDVGAVVVSVNYRL 519 GGGFA + ++ ++G R L GA+VVS+NYR+ Sbjct: 17 GGGFAYGTSSLNVYDG--RYLAQAEGAIVVSMNYRV 50
>SPA12_HUMAN (Q8IW75) Serpin A12 precursor (Visceral adipose-specific serpin)| (Visceral adipose tissue-derived serine protease inhibitor) (Vaspin) (OL-64) Length = 414 Score = 30.4 bits (67), Expect = 4.4 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +1 Query: 10 IIRTHGERAELAHFETEEIGGEAE*LSVRNETRLMEAAAGHGQRPMPAPLPLGVRL 177 I HG+ ++A + ++G ++ + R E AAG G + +P PL V++ Sbjct: 331 IFEEHGDLTKIAPHRSLKVGEAVHKAELKMDERGTEGAAGTGAQTLPMETPLVVKI 386
>SODC_MYCPA (Q9AGW2) Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1)| Length = 227 Score = 29.6 bits (65), Expect = 7.5 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 224 SLRSTASMAAVSPASWSRTPSGSGAGIGRCP*PAAASI 111 S + +S+ +PA W+ +PS SGAG AA SI Sbjct: 22 SPQHASSLPGTTPAVWTGSPSPSGAGAAEAAPAAAPSI 59
>ARNB_SHIFL (Q83QT9) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) Length = 379 Score = 29.6 bits (65), Expect = 7.5 Identities = 22/80 (27%), Positives = 32/80 (40%) Frame = +1 Query: 328 VDASRGIWARXXXXXXXXXXXXXXXYYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSV 507 +DA R I R YY G AI F+ + C++ G ++V+ Sbjct: 137 IDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAE-GGLIVTD 195 Query: 508 NYRLAPEHRYPAAYDDGVDA 567 N LA + R + GVDA Sbjct: 196 NENLARQLRMLKFHGLGVDA 215
>ARNB_ECOLI (P77690) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) (Polymyxin resistance protein pmrH) Length = 379 Score = 29.6 bits (65), Expect = 7.5 Identities = 22/80 (27%), Positives = 32/80 (40%) Frame = +1 Query: 328 VDASRGIWARXXXXXXXXXXXXXXXYYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSV 507 +DA R I R YY G AI F+ + C++ G ++V+ Sbjct: 137 IDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAE-GGLIVTD 195 Query: 508 NYRLAPEHRYPAAYDDGVDA 567 N LA + R + GVDA Sbjct: 196 NENLARQLRMLKFHGLGVDA 215
>ARNB_ECOL6 (Q8FFM3) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) Length = 379 Score = 29.6 bits (65), Expect = 7.5 Identities = 22/80 (27%), Positives = 32/80 (40%) Frame = +1 Query: 328 VDASRGIWARXXXXXXXXXXXXXXXYYHGGGFALFSPAIGPFNGVCRRLCSDVGAVVVSV 507 +DA R I R YY G AI F+ + C++ G ++V+ Sbjct: 137 IDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAE-GGLIVTD 195 Query: 508 NYRLAPEHRYPAAYDDGVDA 567 N LA + R + GVDA Sbjct: 196 NENLARQLRMLKFHGLGVDA 215
>UNG_PRVIF (P52506) Uracil-DNA glycosylase (EC 3.2.2.-) (UDG)| Length = 315 Score = 29.6 bits (65), Expect = 7.5 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = -1 Query: 239 RLTVPSLRSTASMAAVSPASWSRTPSGSGAGIGRCP*PAAAS 114 RL VP+ ++AS AA + A + P+G+GAG + P AA+ Sbjct: 18 RLVVPAAAASASNAATAAA--AAAPAGAGAGASKPARPPAAA 57
>ECX1_METTH (O26779) Probable exosome complex exonuclease 1 (EC 3.1.13.-)| Length = 240 Score = 29.3 bits (64), Expect = 9.8 Identities = 16/49 (32%), Positives = 23/49 (46%) Frame = +1 Query: 196 AAIDAVERSDGTVNRCLYSVIDRLLSKRANPRPDGSGVRSYDFTVDASR 342 A I ++R D V RC Y++ + +R P PD V T +A R Sbjct: 62 AQIRKLQRPDRAVIRCRYNMAPFSVEERKRPGPDRRSVEISKITAEALR 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,950,615 Number of Sequences: 219361 Number of extensions: 753915 Number of successful extensions: 3112 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2949 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3104 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
