Clone Information

BLAST Search Result

Clone Name	bart21e09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation ...	246	3e-65
2	GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI...	242	7e-64
3	GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GD...	242	7e-64
4	GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI b...	241	1e-63
5	GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI ...	241	1e-63
6	GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GD...	241	1e-63
7	GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GD...	241	1e-63
8	GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GD...	241	1e-63
9	GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GD...	241	1e-63
10	GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GD...	241	1e-63
11	GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GD...	241	1e-63
12	GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI b...	241	2e-63
13	GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI...	241	2e-63
14	GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI...	241	2e-63
15	GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI...	239	5e-63
16	GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Se...	235	7e-62
17	GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI...	234	1e-61
18	RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase compo...	80	4e-15
19	RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase comp...	80	6e-15
20	RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase compo...	77	5e-14
21	RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase compo...	59	1e-08
22	RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase compo...	59	2e-08
23	RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase compo...	56	1e-07
24	RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase compo...	55	2e-07
25	RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase compone...	52	1e-06
26	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	41	0.003
27	FIXC_AZOCA (P26484) Protein fixC	37	0.047
28	3O1D_COMTE (Q06401) 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)	34	0.31
29	CRTS2_ONCHC (Q52QW2) Carotenoid isomerase 2, chloroplast precurs...	33	0.52
30	CRTS1_ONCHC (Q52QW3) Carotenoid isomerase 1, chloroplast precurs...	33	0.52
31	FIXC_BRAJA (P10331) Protein fixC	33	0.52
32	AOFN_ASPNG (P46882) Monoamine oxidase N (EC 1.4.3.4) (MAO-N)	33	0.68
33	RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)	33	0.89
34	FIXC_RHISN (Q53208) Protein fixC	32	1.2
35	ALOX_CANBO (Q00922) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methano...	32	1.2
36	CRTSO_DAUCA (Q2VEX9) Carotenoid isomerase, chloroplast precursor...	32	1.2
37	FIXC_RHIME (P09820) Protein fixC	32	1.5
38	GLF_MYCPN (P75499) UDP-galactopyranose mutase (EC 5.4.99.9)	32	1.5
39	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	32	2.0
40	VG12_ICHV1 (Q00165) Hypothetical gene 12 zinc-binding protein	32	2.0
41	GLF_MYCGE (Q49398) UDP-galactopyranose mutase (EC 5.4.99.9)	32	2.0
42	RETST_BRARE (Q5BLE8) Putative all-trans-retinol 13,14-reductase ...	31	2.6
43	FIXC_AZOVI (P53572) Protein fixC	31	2.6
44	CAD3_CAEEL (P34616) Cadherin-3 precursor	31	2.6
45	CRTSO_LYCES (Q8S4R4) Carotenoid isomerase, chloroplast precursor...	31	3.4
46	ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99....	30	4.4
47	ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C	30	7.6
48	GPDM_RAT (P35571) Glycerol-3-phosphate dehydrogenase, mitochondr...	30	7.6
49	Y921_MYCBO (P64752) Hypothetical protein Mb0921c	29	9.9
50	Y897_MYCTU (P64751) Hypothetical protein Rv0897c/MT0921	29	9.9
51	P2OX_TRAVE (P79076) Pyranose 2-oxidase precursor (EC 1.1.3.10) (...	29	9.9
52	P2OX_TRAPU (Q5G234) Pyranose 2-oxidase precursor (EC 1.1.3.10) (...	29	9.9
53	CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phyto...	29	9.9
54	THIJ_ECOLI (Q46948) Protein thiJ	29	9.9
55	IAPL_ASFM2 (O11453) IAP-like protein p27	29	9.9

>GDI1_SCHPO (Q10305) Probable secretory pathway GDP dissociation inhibitor 1|
          Length = 440

 Score =  246 bits (629), Expect = 3e-65
 Identities = 119/197 (60%), Positives = 147/197 (74%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDK 212
           MDEEYDVIVLGTGL EC+LSGLLSVDG KVLH+DRNDYYG DS SLNL QL+  FR  ++
Sbjct: 1   MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQ 60

Query: 213 PPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPA 392
            P  LG  RD+ VD+VPKF+MANG L   LI+TDVT+Y+ FK + GSYV+  G+I KVP 
Sbjct: 61  RPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPG 120

Query: 393 TDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDDT 572
            +MEALKSPLM LFEKRRA+ F  +V +Y + DP T++ +++ +D    +  K GL   T
Sbjct: 121 NEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGT 180

Query: 573 IDFIGHALALHRDDRYL 623
            DFIGHA+AL+ DD YL
Sbjct: 181 QDFIGHAMALYLDDAYL 197

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>GDIB_HUMAN (P50395) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  242 bits (617), Expect = 7e-64
 Identities = 115/198 (58%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+F+   
Sbjct: 1   MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK  +GS+V+  GKI+KVP
Sbjct: 61  SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K   R++  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_MOUSE (P50396) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  242 bits (617), Expect = 7e-64
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIB_PIG (Q6Q7J2) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  241 bits (616), Expect = 1e-63
 Identities = 117/198 (59%), Positives = 150/198 (75%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+F    
Sbjct: 1   MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFNIPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+YL FK  +GS+V+  GKI+KVP
Sbjct: 61  APPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K   RE+  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_RAT (P50398) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  241 bits (616), Expect = 1e-63
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_PONPY (Q7YQM0) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  241 bits (616), Expect = 1e-63
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_PANTR (P60028) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  241 bits (616), Expect = 1e-63
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_MACFA (Q8HXX7) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  241 bits (616), Expect = 1e-63
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_HUMAN (P31150) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
           (XAP-4) (Oligophrenin-2)
          Length = 447

 Score =  241 bits (616), Expect = 1e-63
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_BOVIN (P21856) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
           (SMG p25A GDI)
          Length = 447

 Score =  241 bits (616), Expect = 1e-63
 Identities = 115/198 (58%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+V+  GKI+KVP
Sbjct: 61  GPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIA_CANFA (O97555) Rab GDP dissociation inhibitor alpha (Rab GDI alpha)|
           (Guanosine diphosphate dissociation inhibitor 1) (GDI-1)
          Length = 447

 Score =  241 bits (615), Expect = 1e-63
 Identities = 114/198 (57%), Positives = 154/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S+S+  L +L+K+F+  +
Sbjct: 1   MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLE 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK V+GS+++  GKI+KVP
Sbjct: 61  GPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMG+FEKRR R F ++V ++++ DPKT +G+D      R++  K  L  D
Sbjct: 121 STETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIB_RAT (P50399) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
           (GDI-3)
          Length = 445

 Score =  241 bits (614), Expect = 2e-63
 Identities = 113/198 (57%), Positives = 153/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGG+S S+  L  L+K+F+   
Sbjct: 1   MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
           +PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK ++GS+V+  GKI+KVP
Sbjct: 61  QPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K   R++  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GH+LAL+R D YL
Sbjct: 181 VIDFTGHSLALYRTDDYL 198

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>GDIB_PONPY (Q5RCE1) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  241 bits (614), Expect = 2e-63
 Identities = 114/198 (57%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+++   
Sbjct: 1   MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRYKIPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PP  +G  RD+NVD++PKF+MANG LV+ L++T+VT+YL FK  +GS+V+  GKI+KVP
Sbjct: 61  SPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K   R++  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDIB_MOUSE (Q61598) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
           (GDI-3)
          Length = 445

 Score =  241 bits (614), Expect = 2e-63
 Identities = 113/198 (57%), Positives = 153/198 (77%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGG+S S+  L  L+K+F+   
Sbjct: 1   MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
           +PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+Y+ FK ++GS+V+  GKI+KVP
Sbjct: 61  QPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K   R++  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GH+LAL+R D YL
Sbjct: 181 VIDFTGHSLALYRTDDYL 198

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>GDIB_CANFA (O97556) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  239 bits (610), Expect = 5e-63
 Identities = 114/198 (57%), Positives = 151/198 (76%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLGTGL ECILSG+++V+G KVLHMDRN YYGG+S S+  L  L+K+F+   
Sbjct: 1   MNEEYDVIVLGTGLTECILSGIMTVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PPA +G  RD+N+D++PKF+MANG LV+ L++T+VT+YL FK  +GS+V+  GKI+KVP
Sbjct: 61  APPASMGRGRDWNLDLIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K    E+  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>GDI1_YEAST (P39958) Rab GDP-dissociation inhibitor (Rab GDI) (Secretory|
           pathway GDP dissociation inhibitor)
          Length = 451

 Score =  235 bits (600), Expect = 7e-62
 Identities = 112/201 (55%), Positives = 151/201 (75%), Gaps = 4/201 (1%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFR---- 200
           +D +YDVIVLGTG+ ECILSGLLSVDG KVLH+D+ D+YGG++ S+ L+QL++KF+    
Sbjct: 6   IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPI 65

Query: 201 GEDKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIH 380
            +++  +  G  RD+NVD++PKF+MANG L   LIHTDVT+Y+ FK V GSYVF +GKI+
Sbjct: 66  SKEERESKFGKDRDWNVDLIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIY 125

Query: 381 KVPATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGL 560
           KVPA ++EA+ SPLMG+FEKRR + F  ++  Y + D  THQGLDL K+   E+  K GL
Sbjct: 126 KVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGL 185

Query: 561 SDDTIDFIGHALALHRDDRYL 623
            + T +FIGHA+AL  +D YL
Sbjct: 186 GNSTKEFIGHAMALWTNDDYL 206

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>GDIB_BOVIN (P50397) Rab GDP dissociation inhibitor beta (Rab GDI beta)|
           (Guanosine diphosphate dissociation inhibitor 2) (GDI-2)
          Length = 445

 Score =  234 bits (598), Expect = 1e-61
 Identities = 114/198 (57%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKKFRGED 209
           M+EEYDVIVLG    ECILSG++SV+G KVLHMDRN YYGG+S S+  L  L+K+F+   
Sbjct: 1   MNEEYDVIVLGHTGTECILSGIMSVNGKKVLHMDRNPYYGGESASITPLEDLYKRFKIPG 60

Query: 210 KPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVP 389
            PPA +G  RD+NVD++PKF+MANG LV+ L+ T+VT+YL FK  +GS+V+  GKI+KVP
Sbjct: 61  APPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVP 120

Query: 390 ATDMEALKSPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDD 569
           +T+ EAL S LMGLFEKRR R F +YV ++++ DP+T +G+D  K   RE+  K  L  D
Sbjct: 121 STEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQD 180

Query: 570 TIDFIGHALALHRDDRYL 623
            IDF GHALAL+R D YL
Sbjct: 181 VIDFTGHALALYRTDDYL 198

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>RAEP_YEAST (P32864) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein) (REP)
          Length = 603

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 16/170 (9%)
 Frame = +3

Query: 18  PARPAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WK 191
           P      ++ DV++ GTG+ E +L+  L+  G  VLH+D+NDYYG  S +L ++Q+  W 
Sbjct: 38  PLPATTPDKVDVLIAGTGMVESVLAAALAWQGSNVLHIDKNDYYGDTSATLTVDQIKRWV 97

Query: 192 KFRGEDKPPAHLGA--------------SRDYNVDMVPKFMMANGTLVRTLIHTDVTKYL 329
               E     +  A              SRD+ +D+ PK + A   L+  LI + V +YL
Sbjct: 98  NEVNEGSVSCYKNAKLYVSTLIGSGKYSSRDFGIDLSPKILFAKSDLLSILIKSRVHQYL 157

Query: 330 SFKAVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDY 479
            F+++   + +      K+  T  E      + L  KR    F  +V ++
Sbjct: 158 EFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLMTKRNLMKFIKFVLNW 207

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>RABEP_DROME (Q9V8W3) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein homolog) (REP)
          Length = 511

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--------- 185
           + E++D++V+GTG  E  ++   S  G  VLH+D N+YYG   +S +++ L         
Sbjct: 5   LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFSMDALCARLDQEVE 64

Query: 186 -----------WKKFRGEDKPPAH-------LGASRDYNVDMVPKFMMANGTLVRTLIHT 311
                      W     E +  A        L  SR +++D+ P+ + A G LV+ LI +
Sbjct: 65  PHSALRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKS 124

Query: 312 DVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYND 485
           ++ +Y  F+AVD   +   G+I  VP +  +   +  + + EKR    F     DY +
Sbjct: 125 NICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGE 182

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>RAEP_CANAL (O93831) Rab proteins geranylgeranyltransferase component A (Rab|
           escort protein) (REP)
          Length = 640

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 60/203 (29%), Positives = 91/203 (44%), Gaps = 31/203 (15%)
 Frame = +3

Query: 48  DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGE------- 206
           DV+++GTGL+E IL+  LS  G +VLH+D N YYG   ++L + QL KK+ G+       
Sbjct: 5   DVLIIGTGLQESILAAALSWQGTQVLHIDSNTYYGDSCSTLTIEQL-KKWCGDVNSGKIH 63

Query: 207 ----------DKPPAHLGASRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSY 356
                         ++   S+DY +D+ PK M     L+  LI + V +YL F+++   +
Sbjct: 64  QFQDAQIYIPGGKQSNQYTSKDYGIDLTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFH 123

Query: 357 VFSKGKI-HKVPA-TDMEALKSPLMGLFEKRRARNFFIY----------VQDYNDADPKT 500
           VF       KV A T  +      + L  KR    F  +          V+ Y D   + 
Sbjct: 124 VFENDDFQQKVNATTKQDIFTDKSLSLMTKRYLMKFLKFLLLDPDYKQRVKPYADTPIQV 183

Query: 501 --HQGLDLTKDDTRELIAKHGLS 563
              Q   L +    EL+   GLS
Sbjct: 184 FLQQEFKLEEPQINELVYSIGLS 206

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>RAE2_HUMAN (P26374) Rab proteins geranylgeranyltransferase component A 2 (Rab|
           escort protein 2) (REP-2) (Choroideraemia-like protein)
          Length = 656

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 33/122 (27%), Positives = 62/122 (50%)
 Frame = +3

Query: 237 RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 416
           R +N+D+V K + + G L+  LI +DV++Y+ FK V     F +GK+ +VP +  +   S
Sbjct: 227 RRFNIDLVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNS 286

Query: 417 PLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDDTIDFIGHAL 596
             + + EKR    F  +  +Y +  P  +Q     +    E +    L+ +   F+ H++
Sbjct: 287 KELTMVEKRMLMKFLTFCLEY-EQHPDEYQA--FRQCSFSEYLKTKKLTPNLQHFVLHSI 343

Query: 597 AL 602
           A+
Sbjct: 344 AM 345



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = +3

Query: 42  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 194
           E+DV+++GTGL E IL+   S  G +VLH+D   YYGG+  S + + L  W K
Sbjct: 8   EFDVVIIGTGLPESILAAACSRSGQRVLHIDSRSYYGGNWASFSFSGLLSWLK 60

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>RAE2_MOUSE (Q9QZD5) Rab proteins geranylgeranyltransferase component A 2 (Rab|
           escort protein 2) (REP-2) (Choroideraemia-like protein)
          Length = 621

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 33/123 (26%), Positives = 63/123 (51%)
 Frame = +3

Query: 234 SRDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALK 413
           SR +N+D+V K + + G+L+  LI ++V++Y  FK V     F +GK+ +VP +  +   
Sbjct: 225 SRRFNIDLVSKPLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFWEGKVEQVPCSRADVFN 284

Query: 414 SPLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDDTIDFIGHA 593
           S  + + EKR    F  +  DY   +  + +  D  +    + +    L+ +   FI H+
Sbjct: 285 SKELSMVEKRMLMKFLTFCLDY---EQHSDEYQDFKQCSFSDYLKTKKLTPNLQHFILHS 341

Query: 594 LAL 602
           +A+
Sbjct: 342 IAM 344



 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +3

Query: 42  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN--QLWKK 194
           E+DV+++GTGL E IL+   S  G +VLH+D   YYGG+  S +    Q W K
Sbjct: 8   EFDVVIIGTGLPESILAAACSRSGQRVLHVDSRSYYGGNWASFSFTGLQSWLK 60

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>RAE1_MOUSE (Q9QXG2) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein
           homolog)
          Length = 665

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 31/122 (25%), Positives = 61/122 (50%)
 Frame = +3

Query: 237 RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 416
           R +N+D+V K + + G L+  LI ++V++Y  FK +     F +G + +VP +  +   S
Sbjct: 237 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNS 296

Query: 417 PLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDDTIDFIGHAL 596
             + + EKR    F  +  +Y D  P  ++  + T     E +    L+ +   F+ H++
Sbjct: 297 KQLTMVEKRMLMKFLTFCVEYED-HPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSI 353

Query: 597 AL 602
           A+
Sbjct: 354 AM 355



 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 194
           +  ++DVIV+GTGL E I++   S  G +VLH+D   YYGG+  S + + L  W K
Sbjct: 5   LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK 60

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>RAE1_HUMAN (P24386) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein) (TCD
           protein)
          Length = 653

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 25/93 (26%), Positives = 50/93 (53%)
 Frame = +3

Query: 237 RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 416
           R +N+D+V K + + G L+  LI ++V++Y  FK +     F +G++ +VP +  +   S
Sbjct: 225 RRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNS 284

Query: 417 PLMGLFEKRRARNFFIYVQDYNDADPKTHQGLD 515
             + + EKR    F  +  +Y +  P  ++G +
Sbjct: 285 KQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE 316



 Score = 50.8 bits (120), Expect = 3e-06
 Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 194
           +  E+DVIV+GTGL E I++   S  G +VLH+D   YYGG+  S + + L  W K
Sbjct: 5   LPSEFDVIVIGTGLPESIIAAACSRSGRRVLHVDSRSYYGGNWASFSFSGLLSWLK 60

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>RAE1_RAT (P37727) Rab proteins geranylgeranyltransferase component A 1 (Rab|
           escort protein 1) (REP-1) (Choroideraemia protein
           homolog)
          Length = 650

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 29/122 (23%), Positives = 61/122 (50%)
 Frame = +3

Query: 237 RDYNVDMVPKFMMANGTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDMEALKS 416
           R +N+D+V + + + G L+  LI ++V++Y  FK +     F +G + +VP +  +   S
Sbjct: 222 RRFNIDLVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNS 281

Query: 417 PLMGLFEKRRARNFFIYVQDYNDADPKTHQGLDLTKDDTRELIAKHGLSDDTIDFIGHAL 596
             + + EKR    F  +  +Y +  P  ++  + T     E +    L+ +   F+ H++
Sbjct: 282 KQLTMVEKRMLMKFLTFCVEYEE-HPDEYRAYEGT--TFSEYLKTQKLTPNLQYFVLHSI 338

Query: 597 AL 602
           A+
Sbjct: 339 AM 340



 Score = 49.7 bits (117), Expect = 7e-06
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQL--WKK 194
           +  ++DVIV+GTGL E I++   S  G +VLH+D   YYGG+  S + + L  W K
Sbjct: 5   LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLK 60

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
 Frame = -1

Query: 441  VSQISPSKGI---LEPPCQWQEPCESSLC*RHSFHQQL*KTDTSSHQCE*EYEPKFHSPS 271
            VS + PS+G    +EP C W +PC+S+ C  +S+       D  S+ C    +P ++  +
Sbjct: 999  VSSLDPSRGESINVEPGCSWPDPCDSNPCPTNSYC----SNDWDSYSC--SCDPGYYGDN 1052

Query: 270  *T----LEPCLHCSLC 235
             T    L PC H S C
Sbjct: 1053 CTNVCDLNPCEHQSAC 1068

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>FIXC_AZOCA (P26484) Protein fixC|
          Length = 435

 Score = 37.0 bits (84), Expect = 0.047
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST------SLNLNQLWKK 194
           +DE++D IV+G G+     +  L+  GLKVL ++R +Y G  +       +  L +L   
Sbjct: 2   IDEKFDAIVVGAGMAGNAATLTLARRGLKVLQLERGEYSGSKNVQGAILYADMLEKLVPD 61

Query: 195 FRGEDKPPAHLGASRDYNVD 254
           FR   +  AHL   R + +D
Sbjct: 62  FRETRRWSAHLVEQRFWMLD 81

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>3O1D_COMTE (Q06401) 3-oxosteroid 1-dehydrogenase (EC 1.3.99.4)|
          Length = 573

 Score = 34.3 bits (77), Expect = 0.31
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = +3

Query: 36  DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLW 188
           ++EYD+IV+G+G   C         GLK L +++ + +GG S +L+   +W
Sbjct: 3   EQEYDLIVVGSGAGACWAPIRAQEQGLKTLVVEKTELFGGTS-ALSGGGIW 52

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>CRTS2_ONCHC (Q52QW2) Carotenoid isomerase 2, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO2) (OcrtISO24)
          Length = 587

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 39  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 161
           EEYD IV+G+G+   + +  L+V G +VL +++    GG S
Sbjct: 68  EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108

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>CRTS1_ONCHC (Q52QW3) Carotenoid isomerase 1, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO1) (OcrtISO22)
          Length = 587

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +3

Query: 39  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 161
           EEYD IV+G+G+   + +  L+V G +VL +++    GG S
Sbjct: 68  EEYDAIVIGSGIGGLVAATQLAVKGARVLVLEKYVIPGGSS 108

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>FIXC_BRAJA (P10331) Protein fixC|
          Length = 435

 Score = 33.5 bits (75), Expect = 0.52
 Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST------SLNLNQLWKK 194
           ++E +D IV+G G+     +  ++  G+KVL ++R +Y G  +       +  + +L  +
Sbjct: 2   IEERFDAIVVGAGMAGNAAALTMAKQGMKVLQLERGEYPGSKNVQGAILYADMMEKLIPE 61

Query: 195 FRGEDKPPAHLGASRDYNVD 254
           FR E     HL   R + +D
Sbjct: 62  FREEAPLERHLIEQRFWMMD 81

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>AOFN_ASPNG (P46882) Monoamine oxidase N (EC 1.4.3.4) (MAO-N)|
          Length = 495

 Score = 33.1 bits (74), Expect = 0.68
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
 Frame = +3

Query: 36  DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKP 215
           D  +DVIV+G G      +  L+V G K L ++  D  GG S S N+          D  
Sbjct: 37  DGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNI----------DGY 86

Query: 216 PAHLGASRDYNVDMVPKFMMANGTLV---RTLIHTDVTKYLSFKAVDGSYVFSKGKIH 380
           P  +G                 GT V   ++ +  ++T+Y    A+  S+ FS+G  H
Sbjct: 87  PYEMG-----------------GTWVHWHQSHVWREITRYKMHNALSPSFNFSRGVNH 127

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>RL27A_EUPCR (P48161) 60S ribosomal protein L27a (L29)|
          Length = 148

 Score = 32.7 bits (73), Expect = 0.89
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +3

Query: 93  GLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPPAHLGASRDYNVDMV 260
           G +   G++  H+ RN YY     S+NL++LW     E++  A    S+   +D+V
Sbjct: 51  GHIGKHGMRHFHLMRNQYY---CPSINLSKLWSLVTEEERQKAQTDKSKVILIDVV 103

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>FIXC_RHISN (Q53208) Protein fixC|
          Length = 435

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 36  DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 152
           +E +D IV+G G+     +  ++  GLKVL ++R +Y G
Sbjct: 3   EERFDAIVVGAGMSGNAAAYTMASRGLKVLQLERGEYPG 41

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>ALOX_CANBO (Q00922) Alcohol oxidase (EC 1.1.3.13) (AOX) (Methanol oxidase)|
           (MOX)
          Length = 663

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +3

Query: 30  AMDEEYDVIVLGTGLKECILSG-LLSVD-GLKVLHMDRNDYYGGDSTSLNLNQLW 188
           A+ EE+DVIV G G   C+++G L +VD  LKVL ++  +         NLN  W
Sbjct: 2   AIPEEFDVIVCGGGSTGCVIAGRLANVDENLKVLLIENGEN--------NLNNPW 48

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>CRTSO_DAUCA (Q2VEX9) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO)
          Length = 615

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +3

Query: 42  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 161
           EYD IV+G+G+   + +  L+V G KVL +++    GG S
Sbjct: 97  EYDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYLIPGGSS 136

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>FIXC_RHIME (P09820) Protein fixC|
          Length = 435

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 39  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 152
           E++D IV+G G+     +  ++  GLKVL ++R +Y G
Sbjct: 4   EKFDAIVVGAGMSGNAAAYAMASRGLKVLQLERGEYPG 41

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>GLF_MYCPN (P75499) UDP-galactopyranose mutase (EC 5.4.99.9)|
          Length = 399

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +3

Query: 42  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGD 158
           ++D IVLG G+   +LS +L+  G  VL +++ +  GG+
Sbjct: 14  KFDFIVLGAGISGIVLSHVLAQHGKSVLLLEKRNQLGGN 52

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
 Frame = -1

Query: 441  VSQISPSKGI---LEPPCQWQEPCESSLC*RHSFHQQL*KTDTSSHQCE*EYEPKFHSPS 271
            V  + PS+G    +EP C   +PC+S+ C  +S++      ++ S  C   Y     +  
Sbjct: 1775 VHSLDPSRGESINVEPGCSLPDPCDSNPCPTNSYYSN--DWNSYSCSCVLGYYGDNCTNV 1832

Query: 270  *TLEPCLHCSLC 235
              L PC H S+C
Sbjct: 1833 CDLNPCEHQSVC 1844

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>VG12_ICHV1 (Q00165) Hypothetical gene 12 zinc-binding protein|
          Length = 299

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 239 RLQCRHGSKVYDGEWNFGSYSHSH*CDEVSVF 334
           RL C H  +V DGE+ FG  ++   CDE +VF
Sbjct: 11  RLSCGHPLRVPDGEFCFGDGAYCCDCDERAVF 42

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>GLF_MYCGE (Q49398) UDP-galactopyranose mutase (EC 5.4.99.9)|
          Length = 404

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 10/38 (26%), Positives = 26/38 (68%)
 Frame = +3

Query: 45  YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGD 158
           +D++++G G+   +L+ +L+    +VL +++ D+ GG+
Sbjct: 21  FDILIVGAGISGIVLANILANHNKRVLIVEKRDHIGGN 58

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>RETST_BRARE (Q5BLE8) Putative all-trans-retinol 13,14-reductase precursor (EC|
           1.3.99.23) (All-trans-13,14-dihydroretinol saturase)
           (RetSat)
          Length = 607

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 16/51 (31%), Positives = 33/51 (64%)
 Frame = +3

Query: 3   RRGYQPARPAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 155
           ++G+  +R  + E+ D +V+G+G+    ++ LL+  G KVL ++++D  GG
Sbjct: 51  KQGFLASR--VPEDLDAVVVGSGIGGLAIAVLLAKVGKKVLVLEQHDRAGG 99

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>FIXC_AZOVI (P53572) Protein fixC|
          Length = 427

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 33  MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 152
           M E +DVIV+G G+     +  L+  GLKVL ++R +  G
Sbjct: 1   MAERFDVIVVGAGMAGNAAAYTLAKGGLKVLQIERGETPG 40

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>CAD3_CAEEL (P34616) Cadherin-3 precursor|
          Length = 3343

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 282  GTLVRTLIHTDVTKYLSFKAVDGSYVFSKGKIHKVPATDME---ALKSPLMGLFEKRRAR 452
            GT+V  + ++D TKY       G  +  +G I      D E    LK+ ++   E  R  
Sbjct: 1294 GTVVGVVPNSDTTKYRLVDPTCGLLIDQEGIIRTTTVFDRENTSLLKTKMIEPSE-NRIW 1352

Query: 453  NFFIYVQDYNDADPK 497
            N  I++ D ND  PK
Sbjct: 1353 NLLIFIADVNDNKPK 1367

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>CRTSO_LYCES (Q8S4R4) Carotenoid isomerase, chloroplast precursor (EC 5.-.-.-)|
           (CrtISO) (Protein tangerine)
          Length = 615

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +3

Query: 45  YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDS 161
           YD IV+G+G+   + +  L+V G KVL +++    GG S
Sbjct: 98  YDAIVIGSGIGGLVAATQLAVKGAKVLVLEKYVIPGGSS 136

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>ERG1_SCHPO (Q9C1W3) Probable squalene monooxygenase (EC 1.14.99.7) (Squalene|
           epoxidase) (SE)
          Length = 457

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 39  EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 140
           ++ D+I++G G+  C L   L   G KVL ++R+
Sbjct: 4   QDADIIIIGAGITGCALGAALGRQGRKVLVLERD 37

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>ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C|
          Length = 423

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 75  KECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKPPAH 224
           K  I     +VDG + L M   +Y      +L ++   KK  G+D+ P+H
Sbjct: 265 KNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKKLSGKDRVPSH 314

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>GPDM_RAT (P35571) Glycerol-3-phosphate dehydrogenase, mitochondrial|
           precursor (EC 1.1.99.5) (GPD-M) (GPDH-M)
          Length = 727

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 42  EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDST 164
           E+D++V+G G   C  +      GLK   ++RND+  G S+
Sbjct: 69  EFDILVIGGGATGCGCALDAVTRGLKTALVERNDFASGTSS 109

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>Y921_MYCBO (P64752) Hypothetical protein Mb0921c|
          Length = 535

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 36  DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSL 170
           D ++DV+V+G G    + +  L+  GL+V  ++R    GG + S+
Sbjct: 5   DRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSI 49

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>Y897_MYCTU (P64751) Hypothetical protein Rv0897c/MT0921|
          Length = 535

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 36  DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSL 170
           D ++DV+V+G G    + +  L+  GL+V  ++R    GG + S+
Sbjct: 5   DRDFDVVVVGGGHNGLVAAAYLARAGLRVRLLERLAQTGGAAVSI 49

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>P2OX_TRAVE (P79076) Pyranose 2-oxidase precursor (EC 1.1.3.10) (P2Ox)|
           (Pyranose oxidase) (PROD) (POD) (POx) (Pyranose:oxygen
           2-oxidoreductase) (Glucose 2-oxidase)
           (FAD-oxidoreductase)
          Length = 623

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 27  PAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 155
           P MD +YDV+++G+G   C  +  L   G KV   D  +   G
Sbjct: 41  PGMDIKYDVVIVGSGPIGCTYARELVEAGYKVAMFDIGEIDSG 83

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>P2OX_TRAPU (Q5G234) Pyranose 2-oxidase precursor (EC 1.1.3.10) (P2Ox)|
           (Pyranose oxidase) (PROD) (POD) (POx) (Pyranose:oxygen
           2-oxidoreductase) (Glucose 2-oxidase)
           (FAD-oxidoreductase)
          Length = 622

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 27  PAMDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 155
           P MD +YDV+++G+G   C  +  L   G KV   D  +   G
Sbjct: 41  PGMDIKYDVVIVGSGPIGCTYARELVEAGYKVAMFDIGEIDSG 83

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>CRTI_PHYBL (P54982) Phytoene dehydrogenase (EC 1.14.99.-) (Phytoene|
           desaturase)
          Length = 583

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = +3

Query: 51  VIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLN 179
           VI++G G      +  L+ +G+KV  +++N++ GG  + +N N
Sbjct: 7   VIIIGAGAGGTATAARLAREGIKVTVVEKNNFGGGRCSLINHN 49

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>THIJ_ECOLI (Q46948) Protein thiJ|
          Length = 196

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 18  PARPAMDEEYDVIVLGTGLK--ECILSGLLSVDGLKVLH 128
           P     D EYDVIVL  G+K  EC     L V+ +K  H
Sbjct: 58  PLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFH 96

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>IAPL_ASFM2 (O11453) IAP-like protein p27|
          Length = 238

 Score = 29.3 bits (64), Expect = 9.9
 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
 Frame = +3

Query: 39  EEYDVIVLGTGLKEC-ILSGLLSVDGLKVLHMDRNDYYGGDSTSLNLNQLWKKFRGEDKP 215
           E++ + V G   + C  +   L + GLK +    NDY+  + +  + N+++   R ED  
Sbjct: 89  EKHPLQVHGFWSRNCGFMRATLGIIGLKKMIDSYNDYFTNEVSVKHKNRVYTHKRLED-- 146

Query: 216 PAHLGASRDYNVDMVPKFMMANGTL--VRTLIHTDV--TKYLSFKAVDGSYVFSKGKIH 380
              +G S+ +      +F++AN  +   R  IH  +   +Y +FK V  +Y+ S  K++
Sbjct: 147 ---MGFSKSF-----MRFILANAFMPPYRKYIHKIILNERYFTFKFV--AYLLSFHKVN 195


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,831,162
Number of Sequences: 219361
Number of extensions: 1767852
Number of successful extensions: 5230
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 5046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5209
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5710231900
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result