ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart21d03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 246 bits (124), Expect = 7e-62 Identities = 205/232 (88%) Strand = Plus / Plus Query: 321 cgcgccgaccgaggggccgcccggccgggtccaagaacaagcccaagcccccaatcatca 380 ||||||| |||||||| |||||||| ||||||||||||||||| ||||| || ||||||| Sbjct: 14608261 cgcgccgcccgaggggacgcccggcggggtccaagaacaagccgaagccaccgatcatca 14608320 Query: 381 ttacgcgggacagcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcg 440 | || |||||||||| ||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 14608321 tcaccagggacagcgccaacacgctccggacgcacgtcatggaggtggccggcggctgcg 14608380 Query: 441 acatctccgagagcatcacggcattcgctcgccgcaggcaacgcggggtctgcgtgctga 500 ||||||||||||||||||| | ||||| || ||| |||| |||||||| |||||||| | Sbjct: 14608381 acatctccgagagcatcaccacgttcgcgcgacgccggcagcgcggggtttgcgtgctca 14608440 Query: 501 gcggcgcgggcaccgtgaccaacgtcacgctgcggcagcctgcctcgcaggg 552 ||||||| |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 14608441 gcggcgccggcaccgtcactaacgtcacgctgcggcagcccgcatcgcaggg 14608492 Score = 167 bits (84), Expect = 5e-38 Identities = 184/218 (84%), Gaps = 12/218 (5%) Strand = Plus / Plus Query: 59 atggatccggttactgcatccatccacggtcaccatcttcctccaccgttcaacacccgt 118 ||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 14607975 atggatccggtcacggcatcaatacacggtcaccatcttcctccaccgttcaacacccgc 14608034 Query: 119 gatttccatcaccatctccagcagcag------cagctgcatctcaagtcggaggatgac 172 || |||||||||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 14608035 gacttccatcaccatctccagcagcagcagcaccagctgcatctcaagaccgaggatgac 14608094 Query: 173 cagggcggcggctctccg------ttcggcggccacggcaccaagcacggccacgaggat 226 || ||||||||| ||||| |||||| ||| ||||||||||| || |||||| || Sbjct: 14608095 caaggcggcggcactccgggtgtcttcggcagccgcggcaccaagcgcgaccacgacgac 14608154 Query: 227 gatgagaacagcggcaacggcaacggcagcggcggtga 264 || |||||||| ||||||||| | || ||||| ||||| Sbjct: 14608155 gacgagaacagtggcaacggccatggaagcggtggtga 14608192 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 338 cgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 |||||| ||||||||||||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 29591553 cgcccgcccgggtccaagaacaagccgaagccgcccatcatcgtgacgcgcgacagc 29591497 Score = 52.0 bits (26), Expect = 0.002 Identities = 161/206 (78%) Strand = Plus / Plus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 ||||||||| | || |||||||||||||| ||||| || ||| || | ||||| |||||| Sbjct: 35261318 ggccgcccgccgggctccaagaacaagccgaagccgcccatcttcgtgacgcgcgacagc 35261377 Query: 395 gctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagc 454 | ||| |||| || | |||||||||||||| || ||||| |||| || |||| | Sbjct: 35261378 cccaacgcgctgcgcagccacgtcatggaggtggccggcggcgccgacgtcgccgacgcc 35261437 Query: 455 atcacggcattcgctcgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcacc 514 ||| || ||| | |||||| | || ||||| ||||||||||| |||||||| || || Sbjct: 35261438 atcgcgcagttctcgcgccgccgccagcgcggcgtctgcgtgctcagcggcgccgggacg 35261497 Query: 515 gtgaccaacgtcacgctgcggcagcc 540 || |||||||| ||||||| ||||| Sbjct: 35261498 gtcgccaacgtcgcgctgcgccagcc 35261523 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 acagcggcaacggcaacggcagcggcgg 261 ||||||||||| ||| |||||||||||| Sbjct: 22453371 acagcggcaacagcagcggcagcggcgg 22453398 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gagagaagtgaggaagaaagaata 35 ||||||||||||||||| |||||| Sbjct: 12896839 gagagaagtgaggaagagagaata 12896816
>dbj|AP005653.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0075E08 Length = 130947 Score = 246 bits (124), Expect = 7e-62 Identities = 205/232 (88%) Strand = Plus / Plus Query: 321 cgcgccgaccgaggggccgcccggccgggtccaagaacaagcccaagcccccaatcatca 380 ||||||| |||||||| |||||||| ||||||||||||||||| ||||| || ||||||| Sbjct: 112277 cgcgccgcccgaggggacgcccggcggggtccaagaacaagccgaagccaccgatcatca 112336 Query: 381 ttacgcgggacagcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcg 440 | || |||||||||| ||||||||||||||||||||||||||||| || ||||| |||| Sbjct: 112337 tcaccagggacagcgccaacacgctccggacgcacgtcatggaggtggccggcggctgcg 112396 Query: 441 acatctccgagagcatcacggcattcgctcgccgcaggcaacgcggggtctgcgtgctga 500 ||||||||||||||||||| | ||||| || ||| |||| |||||||| |||||||| | Sbjct: 112397 acatctccgagagcatcaccacgttcgcgcgacgccggcagcgcggggtttgcgtgctca 112456 Query: 501 gcggcgcgggcaccgtgaccaacgtcacgctgcggcagcctgcctcgcaggg 552 ||||||| |||||||| || |||||||||||||||||||| || |||||||| Sbjct: 112457 gcggcgccggcaccgtcactaacgtcacgctgcggcagcccgcatcgcaggg 112508 Score = 167 bits (84), Expect = 5e-38 Identities = 184/218 (84%), Gaps = 12/218 (5%) Strand = Plus / Plus Query: 59 atggatccggttactgcatccatccacggtcaccatcttcctccaccgttcaacacccgt 118 ||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 111991 atggatccggtcacggcatcaatacacggtcaccatcttcctccaccgttcaacacccgc 112050 Query: 119 gatttccatcaccatctccagcagcag------cagctgcatctcaagtcggaggatgac 172 || |||||||||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct: 112051 gacttccatcaccatctccagcagcagcagcaccagctgcatctcaagaccgaggatgac 112110 Query: 173 cagggcggcggctctccg------ttcggcggccacggcaccaagcacggccacgaggat 226 || ||||||||| ||||| |||||| ||| ||||||||||| || |||||| || Sbjct: 112111 caaggcggcggcactccgggtgtcttcggcagccgcggcaccaagcgcgaccacgacgac 112170 Query: 227 gatgagaacagcggcaacggcaacggcagcggcggtga 264 || |||||||| ||||||||| | || ||||| ||||| Sbjct: 112171 gacgagaacagtggcaacggccatggaagcggtggtga 112208
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 332 aggggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggac 391 ||||||||||| ||||| |||||||||||||||||||| || ||||||| ||||| ||| Sbjct: 1962158 aggggccgccccgccggctccaagaacaagcccaagcctccggtcatcatcacgcgcgac 1962099 Query: 392 agcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgac 442 ||||| | | |||| ||| |||||||| | |||||||| |||||||||| Sbjct: 1962098 agcgccagcgcgctgcgggcgcacgtcctcgaggtcgcctccgggtgcgac 1962048 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 |||||||||||||||||||| || |||||| | |||||||||||| Sbjct: 12668896 tccaagaacaagcccaagccgcccatcatcgtgacgcgggacagc 12668940 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 347 gggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 ||||| ||||||||||| ||||| || | ||||| |||||||||||| Sbjct: 24714896 gggtcgaagaacaagccgaagccgccggtgatcatcacgcgggacagc 24714943
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 332 aggggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggac 391 ||||||||||| ||||| |||||||||||||||||||| || ||||||| ||||| ||| Sbjct: 90938 aggggccgccccgccggctccaagaacaagcccaagcctccggtcatcatcacgcgcgac 90879 Query: 392 agcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgac 442 ||||| | | |||| ||| |||||||| | |||||||| |||||||||| Sbjct: 90878 agcgccagcgcgctgcgggcgcacgtcctcgaggtcgcctccgggtgcgac 90828
>dbj|AK107405.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E03, full insert sequence Length = 1276 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 332 aggggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggac 391 ||||||||||| ||||| |||||||||||||||||||| || ||||||| ||||| ||| Sbjct: 415 aggggccgccccgccggctccaagaacaagcccaagcctccggtcatcatcacgcgcgac 474 Query: 392 agcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgac 442 ||||| | | |||| ||| |||||||| | |||||||| |||||||||| Sbjct: 475 agcgccagcgcgctgcgggcgcacgtcctcgaggtcgcctccgggtgcgac 525
>ref|XM_483808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagcgctaacacgctccgg 409 |||||||||||||||||||| || ||| || | |||||||||||| | ||| |||| || Sbjct: 464 tccaagaacaagcccaagccgcccatcttcgtgacgcgggacagcccgaacgcgctgcgc 523 Query: 410 acgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagcatcacggcattcgct 469 | |||||||||||||| || ||||| ||| || ||||| |||| || ||||| Sbjct: 524 agccacgtcatggaggtggccggcggcgccgatgtcgccgagtccatcgcgcacttcgcg 583 Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgt 525 || || |||| ||||| ||||||||||| ||||| || |||||||||||| |||| Sbjct: 584 cggcggcggcagcgcggcgtctgcgtgctcagcggggccggcaccgtgaccgacgt 639
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Minus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagcgctaacacgctccgg 409 |||||||||||||||||||| || ||| || | |||||||||||| | ||| |||| || Sbjct: 28194716 tccaagaacaagcccaagccgcccatcttcgtgacgcgggacagcccgaacgcgctgcgc 28194657 Query: 410 acgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagcatcacggcattcgct 469 | |||||||||||||| || ||||| ||| || ||||| |||| || ||||| Sbjct: 28194656 agccacgtcatggaggtggccggcggcgccgatgtcgccgagtccatcgcgcacttcgcg 28194597 Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgt 525 || || |||| ||||| ||||||||||| ||||| || |||||||||||| |||| Sbjct: 28194596 cggcggcggcagcgcggcgtctgcgtgctcagcggggccggcaccgtgaccgacgt 28194541 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcc 369 ||||||||| | || |||||||||||||||||||| Sbjct: 3488031 ggccgcccgccgggctccaagaacaagcccaagcc 3487997
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Minus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagcgctaacacgctccgg 409 |||||||||||||||||||| || ||| || | |||||||||||| | ||| |||| || Sbjct: 78189 tccaagaacaagcccaagccgcccatcttcgtgacgcgggacagcccgaacgcgctgcgc 78130 Query: 410 acgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagcatcacggcattcgct 469 | |||||||||||||| || ||||| ||| || ||||| |||| || ||||| Sbjct: 78129 agccacgtcatggaggtggccggcggcgccgatgtcgccgagtccatcgcgcacttcgcg 78070 Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgt 525 || || |||| ||||| ||||||||||| ||||| || |||||||||||| |||| Sbjct: 78069 cggcggcggcagcgcggcgtctgcgtgctcagcggggccggcaccgtgaccgacgt 78014
>dbj|AK110263.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-B06, full insert sequence Length = 1398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagcgctaacacgctccgg 409 |||||||||||||||||||| || ||| || | |||||||||||| | ||| |||| || Sbjct: 464 tccaagaacaagcccaagccgcccatcttcgtgacgcgggacagcccgaacgcgctgcgc 523 Query: 410 acgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagcatcacggcattcgct 469 | |||||||||||||| || ||||| ||| || ||||| |||| || ||||| Sbjct: 524 agccacgtcatggaggtggccggcggcgccgatgtcgccgagtccatcgcgcacttcgcg 583 Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgt 525 || || |||| ||||| ||||||||||| ||||| || |||||||||||| |||| Sbjct: 584 cggcggcggcagcgcggcgtctgcgtgctcagcggggccggcaccgtgaccgacgt 639
>ref|XM_473716.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 918 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 321 cgcgccgaccgaggggccgcccggccgggtccaagaacaagcccaagcccccaatcatca 380 ||||||| ||| |||| |||||| | || |||||||||||||| ||||| || | |||| Sbjct: 242 cgcgccggccgcgggggcgcccgcctggctccaagaacaagccgaagccgccggtgatca 301 Query: 381 ttacgcgggacagcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcg 440 | |||||||| ||||| |||||||| || | ||| || ||||||||| | |||| |||| Sbjct: 302 tcacgcgggagagcgccaacacgctgcgcgcccacatcctggaggtcgggagcggctgcg 361 Query: 441 ac 442 || Sbjct: 362 ac 363
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 321 cgcgccgaccgaggggccgcccggccgggtccaagaacaagcccaagcccccaatcatca 380 ||||||| ||| |||| |||||| | || |||||||||||||| ||||| || | |||| Sbjct: 29805468 cgcgccggccgcgggggcgcccgcctggctccaagaacaagccgaagccgccggtgatca 29805409 Query: 381 ttacgcgggacagcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcg 440 | |||||||| ||||| |||||||| || | ||| || ||||||||| | |||| |||| Sbjct: 29805408 tcacgcgggagagcgccaacacgctgcgcgcccacatcctggaggtcgggagcggctgcg 29805349 Query: 441 ac 442 || Sbjct: 29805348 ac 29805347
>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06, complete sequence Length = 178552 Score = 60.0 bits (30), Expect = 8e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 321 cgcgccgaccgaggggccgcccggccgggtccaagaacaagcccaagcccccaatcatca 380 ||||||| ||| |||| |||||| | || |||||||||||||| ||||| || | |||| Sbjct: 86394 cgcgccggccgcgggggcgcccgcctggctccaagaacaagccgaagccgccggtgatca 86335 Query: 381 ttacgcgggacagcgctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcg 440 | |||||||| ||||| |||||||| || | ||| || ||||||||| | |||| |||| Sbjct: 86334 tcacgcgggagagcgccaacacgctgcgcgcccacatcctggaggtcgggagcggctgcg 86275 Query: 441 ac 442 || Sbjct: 86274 ac 86273
>dbj|AP006863.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08G16, TM0934, complete sequence Length = 104894 Score = 60.0 bits (30), Expect = 8e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 344 gccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagcgctaacacg 403 ||||| || ||||||||||| ||||| || |||||||| || || |||||||| ||| | Sbjct: 18820 gccggatcgaagaacaagcctaagccgcccatcatcatcacccgcgacagcgccaacgca 18879 Query: 404 ctccggacgcacgtcatggaggtcgcgggcgggtgcgacatc 445 || ||| ||||||||||||||||| | ||| ||||||||| Sbjct: 18880 cttaagacccacgtcatggaggtcgccgacggctgcgacatc 18921
>ref|XM_467450.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1011 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 338 cgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 |||||| ||||||||||||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 310 cgcccgcccgggtccaagaacaagccgaagccgcccatcatcgtgacgcgcgacagc 366
>gb|AC182651.2| Populus trichocarpa clone Pop1-118I23, complete sequence Length = 96071 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 344 gccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagcgc 396 ||||| |||||||||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 56901 gccggatccaagaacaagcctaagcccccaattatcatcacacgggatagcgc 56849
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 |||||||||||||||||||| || |||||| | |||||||||||| Sbjct: 151209 tccaagaacaagcccaagccgcccatcatcgtgacgcgggacagc 151253
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 350 tccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 |||||||||||||||||||| || |||||| | |||||||||||| Sbjct: 22417 tccaagaacaagcccaagccgcccatcatcgtgacgcgggacagc 22461
>dbj|AP004165.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1479_B12 Length = 127089 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 338 cgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 |||||| ||||||||||||||||||| ||||| || |||||| | ||||| |||||| Sbjct: 49274 cgcccgcccgggtccaagaacaagccgaagccgcccatcatcgtgacgcgcgacagc 49218
>ref|NM_187497.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 777 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 280 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 339 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 340 ctccggcagcc 350
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 8995337 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 8995396 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 8995397 ctccggcagcc 8995407 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagcggcaacggcaacggca 254 |||||||||||||||||||| Sbjct: 8032605 cagcggcaacggcaacggca 8032586 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ccatctccagcagcagcagctgca 153 ||||| |||||||||||||||||| Sbjct: 6965771 ccatcaccagcagcagcagctgca 6965794 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 |||||||||||||||||| ||||| Sbjct: 731617 gcggcaacggcaacggcaacggcg 731594
>gb|AC135209.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0071M09, complete sequence Length = 143595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 120198 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 120257 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 120258 ctccggcagcc 120268
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 2373 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 2432 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 2433 ctccggcagcc 2443
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 8993172 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 8993231 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 8993232 ctccggcagcc 8993242 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagcggcaacggcaacggca 254 |||||||||||||||||||| Sbjct: 8030440 cagcggcaacggcaacggca 8030421 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ccatctccagcagcagcagctgca 153 ||||| |||||||||||||||||| Sbjct: 6963666 ccatcaccagcagcagcagctgca 6963689 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 |||||||||||||||||| ||||| Sbjct: 731615 gcggcaacggcaacggcaacggcg 731592
>dbj|AK106069.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H05, full insert sequence Length = 1368 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 460 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 519 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 520 ctccggcagcc 530
>dbj|AK061579.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H06, full insert sequence Length = 1116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 470 cgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcaccgtgaccaacgtcacg 529 ||||||||||| ||||| |||| |||||| ||||| ||| |||| |||||||||||| Sbjct: 472 cgccgcaggcagcgcggcgtctccgtgctcagcgggagcggcgccgtcaccaacgtcacg 531 Query: 530 ctgcggcagcc 540 || |||||||| Sbjct: 532 ctccggcagcc 542
>ref|XM_468440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 52.0 bits (26), Expect = 0.002 Identities = 161/206 (78%) Strand = Plus / Plus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 ||||||||| | || |||||||||||||| ||||| || ||| || | ||||| |||||| Sbjct: 184 ggccgcccgccgggctccaagaacaagccgaagccgcccatcttcgtgacgcgcgacagc 243 Query: 395 gctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagc 454 | ||| |||| || | |||||||||||||| || ||||| |||| || |||| | Sbjct: 244 cccaacgcgctgcgcagccacgtcatggaggtggccggcggcgccgacgtcgccgacgcc 303 Query: 455 atcacggcattcgctcgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcacc 514 ||| || ||| | |||||| | || ||||| ||||||||||| |||||||| || || Sbjct: 304 atcgcgcagttctcgcgccgccgccagcgcggcgtctgcgtgctcagcggcgccgggacg 363 Query: 515 gtgaccaacgtcacgctgcggcagcc 540 || |||||||| ||||||| ||||| Sbjct: 364 gtcgccaacgtcgcgctgcgccagcc 389
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 52.0 bits (26), Expect = 0.002 Identities = 161/206 (78%) Strand = Plus / Plus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 ||||||||| | || |||||||||||||| ||||| || ||| || | ||||| |||||| Sbjct: 11652 ggccgcccgccgggctccaagaacaagccgaagccgcccatcttcgtgacgcgcgacagc 11711 Query: 395 gctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagc 454 | ||| |||| || | |||||||||||||| || ||||| |||| || |||| | Sbjct: 11712 cccaacgcgctgcgcagccacgtcatggaggtggccggcggcgccgacgtcgccgacgcc 11771 Query: 455 atcacggcattcgctcgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcacc 514 ||| || ||| | |||||| | || ||||| ||||||||||| |||||||| || || Sbjct: 11772 atcgcgcagttctcgcgccgccgccagcgcggcgtctgcgtgctcagcggcgccgggacg 11831 Query: 515 gtgaccaacgtcacgctgcggcagcc 540 || |||||||| ||||||| ||||| Sbjct: 11832 gtcgccaacgtcgcgctgcgccagcc 11857
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 52.0 bits (26), Expect = 0.002 Identities = 161/206 (78%) Strand = Plus / Plus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 ||||||||| | || |||||||||||||| ||||| || ||| || | ||||| |||||| Sbjct: 73368 ggccgcccgccgggctccaagaacaagccgaagccgcccatcttcgtgacgcgcgacagc 73427 Query: 395 gctaacacgctccggacgcacgtcatggaggtcgcgggcgggtgcgacatctccgagagc 454 | ||| |||| || | |||||||||||||| || ||||| |||| || |||| | Sbjct: 73428 cccaacgcgctgcgcagccacgtcatggaggtggccggcggcgccgacgtcgccgacgcc 73487 Query: 455 atcacggcattcgctcgccgcaggcaacgcggggtctgcgtgctgagcggcgcgggcacc 514 ||| || ||| | |||||| | || ||||| ||||||||||| |||||||| || || Sbjct: 73488 atcgcgcagttctcgcgccgccgccagcgcggcgtctgcgtgctcagcggcgccgggacg 73547 Query: 515 gtgaccaacgtcacgctgcggcagcc 540 || |||||||| ||||||| ||||| Sbjct: 73548 gtcgccaacgtcgcgctgcgccagcc 73573
>ref|XM_817510.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.70.3880) partial mRNA Length = 681 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggc 259 ||||||||||||||||||||||||| Sbjct: 539 cagcggcaacggcaacggcagcggc 563
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 486 gggtctgcgtgctgagcggcgcggg 510 ||||||||||||||||||||||||| Sbjct: 115198 gggtctgcgtgctgagcggcgcggg 115222
>gb|AC119834.12| Mus musculus chromosome 5, clone RP24-383P24, complete sequence Length = 223764 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagcagctgcatc 155 ||||||||||| |||||||||||||| ||||| Sbjct: 36169 ccatcaccatcaccagcagcagcagcagcatc 36200
>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence Length = 161579 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 133 tctccagcagcagcagctgcatct 156 |||||||||||||||||||||||| Sbjct: 60096 tctccagcagcagcagctgcatct 60073
>gb|AC158994.4| Mus musculus BAC clone RP24-79P8 from chromosome 5, complete sequence Length = 201330 Score = 48.1 bits (24), Expect = 0.031 Identities = 30/32 (93%) Strand = Plus / Minus Query: 124 ccatcaccatctccagcagcagcagctgcatc 155 ||||||||||| |||||||||||||| ||||| Sbjct: 3057 ccatcaccatcaccagcagcagcagcagcatc 3026
>gb|AF325198.1|AF325198 Triticum aestivum LRR14 (Lrr14), TAK14 (TAK14), and LRK14 (Lrk14) genes, complete cds; and unknown gene Length = 43606 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 130 ccatctccagcagcagcagctgcatctc 157 |||||||||||||||||||| ||||||| Sbjct: 12282 ccatctccagcagcagcagcagcatctc 12309
>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete sequence Length = 145958 Score = 48.1 bits (24), Expect = 0.031 Identities = 24/24 (100%) Strand = Plus / Minus Query: 133 tctccagcagcagcagctgcatct 156 |||||||||||||||||||||||| Sbjct: 98565 tctccagcagcagcagctgcatct 98542
>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete sequence Length = 231693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 gcggcaacggcaacggcagcggc 259 ||||||||||||||||||||||| Sbjct: 47460 gcggcaacggcaacggcagcggc 47482
>ref|XM_480199.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1291 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcc 369 ||||||||| | || |||||||||||||||||||| Sbjct: 333 ggccgcccgccgggctccaagaacaagcccaagcc 367
>ref|NM_189783.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 347 gggtccaagaacaagcccaagcc 369 ||||||||||||||||||||||| Sbjct: 103 gggtccaagaacaagcccaagcc 125
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 496 gctgagcggcgcgggcaccgtga 518 ||||||||||||||||||||||| Sbjct: 3042773 gctgagcggcgcgggcaccgtga 3042795 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 tgagcggcgcgggcaccgtg 517 |||||||||||||||||||| Sbjct: 1614049 tgagcggcgcgggcaccgtg 1614030
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 496 gctgagcggcgcgggcaccgtga 518 ||||||||||||||||||||||| Sbjct: 189507 gctgagcggcgcgggcaccgtga 189485 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 tgagcggcgcgggcaccgtg 517 |||||||||||||||||||| Sbjct: 2860690 tgagcggcgcgggcaccgtg 2860671
>gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, complete sequence Length = 221034 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 123 tccatcaccatctccagcagcagcagc 149 |||||| |||||||||||||||||||| Sbjct: 126919 tccatctccatctccagcagcagcagc 126893
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 496 gctgagcggcgcgggcaccgtga 518 ||||||||||||||||||||||| Sbjct: 4041279 gctgagcggcgcgggcaccgtga 4041257 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggc 259 |||||||||||||||||||||| Sbjct: 2978206 cggcaacggcaacggcagcggc 2978185 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 tgagcggcgcgggcaccgtg 517 |||||||||||||||||||| Sbjct: 2590870 tgagcggcgcgggcaccgtg 2590851
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 347 gggtccaagaacaagcccaagcc 369 ||||||||||||||||||||||| Sbjct: 16047029 gggtccaagaacaagcccaagcc 16047007 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggcgg 261 |||||||||||||||| ||||||| Sbjct: 19938197 cggcaacggcaacggcggcggcgg 19938174
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 347 gggtccaagaacaagcccaagcc 369 ||||||||||||||||||||||| Sbjct: 42005245 gggtccaagaacaagcccaagcc 42005267 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 ||||||||||| ||||||||||||| Sbjct: 21989683 catcaccatcttcagcagcagcagc 21989707
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 347 gggtccaagaacaagcccaagcc 369 ||||||||||||||||||||||| Sbjct: 107322 gggtccaagaacaagcccaagcc 107344
>gb|AC160764.2| Ornithorhynchus anatinus BAC clone OABb-454A1 from chromosome unknown, complete sequence Length = 125050 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Minus Query: 322 gcgccgaccgaggggccgcccggccgg 348 ||||| ||||||||||||||||||||| Sbjct: 42051 gcgccaaccgaggggccgcccggccgg 42025
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcc 369 ||||||||| | || |||||||||||||||||||| Sbjct: 121450 ggccgcccgccgggctccaagaacaagcccaagcc 121416
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcc 369 ||||||||| | || |||||||||||||||||||| Sbjct: 43748 ggccgcccgccgggctccaagaacaagcccaagcc 43714
>dbj|AK109080.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H03, full insert sequence Length = 1291 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 335 ggccgcccggccgggtccaagaacaagcccaagcc 369 ||||||||| | || |||||||||||||||||||| Sbjct: 333 ggccgcccgccgggctccaagaacaagcccaagcc 367
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 496 gctgagcggcgcgggcaccgtga 518 ||||||||||||||||||||||| Sbjct: 3776253 gctgagcggcgcgggcaccgtga 3776231 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 cgctcgccgcaggcaacgcg 485 |||||||||||||||||||| Sbjct: 1002586 cgctcgccgcaggcaacgcg 1002567
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 347 gggtccaagaacaagcccaagcc 369 ||||||||||||||||||||||| Sbjct: 16000262 gggtccaagaacaagcccaagcc 16000240 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggcgg 261 |||||||||||||||| ||||||| Sbjct: 19864411 cggcaacggcaacggcggcggcgg 19864388
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 347 gggtccaagaacaagcccaagcc 369 ||||||||||||||||||||||| Sbjct: 114442 gggtccaagaacaagcccaagcc 114420
>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence Length = 217434 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 gcggcaacggcaacggcagcggc 259 ||||||||||||||||||||||| Sbjct: 155880 gcggcaacggcaacggcagcggc 155902
>gb|AC154737.3| Mus musculus BAC clone RP24-390A6 from chromosome 9, complete sequence Length = 113204 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagcagc 149 ||||||||||| |||||||||||||| Sbjct: 50673 ccatcaccatcaccagcagcagcagc 50698
>ref|XM_450806.1| Oryza sativa (japonica cultivar-group), mRNA Length = 234 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagcagc 149 |||||||||| ||||||||||||||| Sbjct: 39 ccatcaccatgtccagcagcagcagc 64
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 236 agcggcaacggcaacggcagcggcgg 261 ||||||||| |||||||||||||||| Sbjct: 1791387 agcggcaaccgcaacggcagcggcgg 1791412
>gb|AC132297.4| Mus musculus chromosome 7 clone RP24-330M18, complete sequence Length = 152941 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggc 259 |||||||||||||||||||||| Sbjct: 127057 cggcaacggcaacggcagcggc 127036
>ref|XM_883507.1| Leishmania major strain Friedlin hypothetical protein (L7610.03) partial mRNA Length = 3840 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 239 ggcaacggcaacggcagcggcggtga 264 |||||||||||||||||| ||||||| Sbjct: 3598 ggcaacggcaacggcagcagcggtga 3623
>ref|XM_756643.1| Ustilago maydis 521 hypothetical protein (UM05589.1) partial mRNA Length = 450 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 237 gcggcaacggcaacggcagcgg 258 |||||||||||||||||||||| Sbjct: 200 gcggcaacggcaacggcagcgg 221
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 239 ggcaacggcaacggcagcggcggtga 264 |||||||||||||||||| ||||||| Sbjct: 121602 ggcaacggcaacggcagcagcggtga 121577
>ref|XM_539672.2| PREDICTED: Canis familiaris similar to Telomerase protein component 1 (Telomerase-associated protein 1) (Telomerase protein 1) (p240) (p80 telomerase homolog) (LOC482555), mRNA Length = 7812 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 124 ccatcaccatctccagcagcagcagc 149 ||||||||||| |||||||||||||| Sbjct: 2074 ccatcaccatccccagcagcagcagc 2049
>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence Length = 227968 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggc 259 |||||||||||||||||||||| Sbjct: 105739 cggcaacggcaacggcagcggc 105760
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 cagcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||||| Sbjct: 2849219 cagcggcaacggcaacgtcagcggcg 2849194 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 gagaacagcggcaacggcaacggca 254 |||||| |||||||||||||||||| Sbjct: 4192980 gagaacggcggcaacggcaacggca 4192956
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagcagc 149 |||||||||| ||||||||||||||| Sbjct: 12912111 ccatcaccatgtccagcagcagcagc 12912136 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||| Sbjct: 5633923 gcggcaacggcaacggcggcggcg 5633900 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gagagagaagtgaggaagaa 29 |||||||||||||||||||| Sbjct: 5084777 gagagagaagtgaggaagaa 5084758
>gb|AC007815.7|AC007815 Drosophila melanogaster, chromosome 3R, region 92B-92B, BAC clone BACR07I18, complete sequence Length = 159413 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 gcaacggcaacggcagcggcgg 261 |||||||||||||||||||||| Sbjct: 44428 gcaacggcaacggcagcggcgg 44449
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagcagc 149 |||||||||| ||||||||||||||| Sbjct: 74095 ccatcaccatgtccagcagcagcagc 74120
>gb|AE003727.3| Drosophila melanogaster chromosome 3R, section 65 of 118 of the complete sequence Length = 242618 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 gcaacggcaacggcagcggcgg 261 |||||||||||||||||||||| Sbjct: 25766 gcaacggcaacggcagcggcgg 25787
>emb|AJ544618.1|TRU544618 Takifugu rubripes utrn gene for putative utrophin, exons 1-54 and joined CDS Length = 46600 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 132 atctccagcagcagcagctgca 153 |||||||||||||||||||||| Sbjct: 20403 atctccagcagcagcagctgca 20424
>gb|AC150275.2| Mus musculus BAC clone RP23-409M16 from 7, complete sequence Length = 224935 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggc 259 |||||||||||||||||||||| Sbjct: 223635 cggcaacggcaacggcagcggc 223614
>gb|DQ138937.1| Drosophila erecta voucher stock #14021-0224.0 CG12105 gene, partial cds Length = 4194 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagcagc 149 ||||||||||| |||||||||||||| Sbjct: 819 ccatcaccatcgccagcagcagcagc 844
>gb|AC165078.2| Mus musculus BAC clone RP24-287O1 from chromosome 12, complete sequence Length = 172492 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 caccatctccagcagcagcag 148 ||||||||||||||||||||| Sbjct: 110176 caccatctccagcagcagcag 110196
>ref|XM_869742.1| PREDICTED: Bos taurus hypothetical protein LOC617473 (LOC617473), mRNA Length = 1320 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 329 ccgaggggccgcccggccggg 349 ||||||||||||||||||||| Sbjct: 770 ccgaggggccgcccggccggg 750
>ref|XM_362231.1| Magnaporthe grisea 70-15 hypothetical protein (MG04676.4) partial cds Length = 1512 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 234 acagcggcaacggcaacggcagcgg 258 ||||||||||||||| ||||||||| Sbjct: 434 acagcggcaacggcaccggcagcgg 410
>ref|XM_658260.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5748.2), mRNA Length = 2127 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 cgctcgccgcaggcaacgcgg 486 ||||||||||||||||||||| Sbjct: 1562 cgctcgccgcaggcaacgcgg 1582
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcgg 258 ||||||||||||||||||||| Sbjct: 5366481 cggcaacggcaacggcagcgg 5366461
>gb|AY345124.1| Trichoplusia ni peritrophic membrane chitin binding protein 1 (CBP1) mRNA, complete cds Length = 3679 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 gatgatgagaacagcggcaacggcaacgg 252 |||||||| ||||||||||||| |||||| Sbjct: 2120 gatgatgataacagcggcaacgacaacgg 2148 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 gatgatgagaacagcggcaacggcaacgg 252 |||||||| ||||||||||||| |||||| Sbjct: 1496 gatgatgataacagcggcaacgacaacgg 1524
>ref|XM_751410.1| Ustilago maydis 521 hypothetical protein (UM00356.1) partial mRNA Length = 3978 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggc 259 ||||||||||||||||| ||||||| Sbjct: 20 cagcggcaacggcaacgacagcggc 44
>ref|XM_752979.1| Ustilago maydis 521 hypothetical protein (UM01925.1) partial mRNA Length = 3153 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggc 259 |||||||||||||||||||| |||| Sbjct: 1407 cagcggcaacggcaacggcaacggc 1431
>ref|XM_755102.1| Ustilago maydis 521 hypothetical protein (UM04048.1) partial mRNA Length = 1890 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggc 259 |||||||||||||||||||| |||| Sbjct: 1834 cagcggcaacggcaacggcaacggc 1858
>ref|XM_750482.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12430) partial mRNA Length = 2751 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 tccatcaccatctccagcagc 143 ||||||||||||||||||||| Sbjct: 1083 tccatcaccatctccagcagc 1103
>ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA Length = 4387 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 |||||||||| |||||||||||||| Sbjct: 1753 catcaccatcaccagcagcagcagc 1777
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 tccagcagcagcagctgcatc 155 ||||||||||||||||||||| Sbjct: 1894203 tccagcagcagcagctgcatc 1894183
>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33 Contains the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 176422 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 aggatgatgagaacagcggca 242 ||||||||||||||||||||| Sbjct: 45253 aggatgatgagaacagcggca 45233
>emb|AL732484.13| Mouse DNA sequence from clone RP23-37B7 on chromosome 2, complete sequence Length = 201265 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 ccagcagcagcagctgcatctcaag 160 |||||||||||||| |||||||||| Sbjct: 72929 ccagcagcagcagcagcatctcaag 72953
>emb|X89453.1|RNDRPLA R.norvegicus mRNA for DRPLA protein Length = 4193 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 |||||||||| |||||||||||||| Sbjct: 1548 catcaccatcaccagcagcagcagc 1572
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 acagcggcaacggcaacggca 254 ||||||||||||||||||||| Sbjct: 31710 acagcggcaacggcaacggca 31730
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 gctgagcggcgcgggcaccgt 516 ||||||||||||||||||||| Sbjct: 89835 gctgagcggcgcgggcaccgt 89815
>gb|AC131961.1| Drosophila pseudoobscura FOSMID DPSF1-548A3 (Children's Hospital Oakland Research Institute Drosophila pseudoobscura FOSMID Library) complete sequence Length = 39990 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggc 259 ||||||||||||||||| ||||||| Sbjct: 17055 cagcggcaacggcaacgccagcggc 17079
>gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, complete cds Length = 4387 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 |||||||||| |||||||||||||| Sbjct: 1753 catcaccatcaccagcagcagcagc 1777
>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone BACR34C17, complete sequence Length = 167447 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcggt 262 ||||||||||||||||| ||||||| Sbjct: 28462 cggcaacggcaacggcaacggcggt 28486
>gb|AC156449.2| Volvox carteri clone JGIAOBO-37K9, complete sequence Length = 37976 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 |||||||||| |||||||||||||| Sbjct: 3362 catcaccatcaccagcagcagcagc 3386
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cagcggcaacggcaacggcagcggc 259 |||||||||||||||||||| |||| Sbjct: 1502010 cagcggcaacggcaacggcaacggc 1501986 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 gcggggtctgcgtgctgagcggcg 506 ||||||||||||||||| |||||| Sbjct: 2461406 gcggggtctgcgtgctgcgcggcg 2461429 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggcgg 261 ||||||||||||||||| |||||| Sbjct: 1502001 cggcaacggcaacggcaacggcgg 1501978
>dbj|AP003413.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151A10 Length = 124344 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 ||||||||||| ||||||||||||| Sbjct: 1196 catcaccatcttcagcagcagcagc 1220
>dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129G05 Length = 132535 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 ||||||||||| ||||||||||||| Sbjct: 71491 catcaccatcttcagcagcagcagc 71515
>ref|XM_552630.1| Anopheles gambiae str. PEST ENSANGP00000029517 (ENSANGG00000024218), partial mRNA Length = 669 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 accatctccagcagcagcagc 149 ||||||||||||||||||||| Sbjct: 368 accatctccagcagcagcagc 388
>dbj|AK110643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-D02, full insert sequence Length = 1044 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggc 259 |||||||||||||||||||| |||| Sbjct: 653 cagcggcaacggcaacggcaacggc 677
>dbj|AK110552.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-C03, full insert sequence Length = 961 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 cagcggcaacggcaacggcagcggc 259 |||||||||||||||| |||||||| Sbjct: 836 cagcggcaacggcaaccgcagcggc 812
>dbj|AK105504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D09, full insert sequence Length = 1626 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 catcaccatctccagcagcagcagc 149 ||||||||||| ||||||||||||| Sbjct: 925 catcaccatcttcagcagcagcagc 901
>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete sequence Length = 313634 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcggt 262 ||||||||||||||||| ||||||| Sbjct: 178998 cggcaacggcaacggcaacggcggt 179022
>gb|AC104153.2| Papio anubis clone RP41-431I4, complete sequence Length = 191465 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 catcaccatctccagcagcagcagc 149 |||||||||| |||||||||||||| Sbjct: 147090 catcaccatcaccagcagcagcagc 147066
>emb|AL833787.8| Mouse DNA sequence from clone RP23-228E2 on chromosome 2, complete sequence Length = 237055 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 catcaccatctccagcagcagcagc 149 |||||||||| |||||||||||||| Sbjct: 159164 catcaccatccccagcagcagcagc 159188
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 cgaccgaggggccgcccggc 345 |||||||||||||||||||| Sbjct: 4070399 cgaccgaggggccgcccggc 4070380
>ref|NM_118404.2| Arabidopsis thaliana SMO1-2 (STEROL C4-METHYL OXIDASE); catalytic AT4G22756 (SMO1-2) mRNA, complete cds Length = 1298 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 agaggaacgagagagaag-tgaggaaga 28 |||||||||||||||||| ||||||||| Sbjct: 279 agaggaacgagagagaagatgaggaaga 252
>ref|XM_511674.1| PREDICTED: Pan troglodytes similar to AD023 protein (LOC454878), mRNA Length = 1482 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 1388 atctccagcagcagcagctg 1369
>gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, complete sequence Length = 161738 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 ggaacgagagagaagtgaggaaga 28 |||| ||||||||||||||||||| Sbjct: 53736 ggaaggagagagaagtgaggaaga 53713
>gb|AC161411.11| Mus musculus chromosome 1, clone RP24-223E1, complete sequence Length = 154942 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 cttgctctgatttccccttc 285 |||||||||||||||||||| Sbjct: 17283 cttgctctgatttccccttc 17264
>ref|XM_470617.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1767 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 ccatctccagcagcagcagctgca 153 ||||| |||||||||||||||||| Sbjct: 593 ccatcaccagcagcagcagctgca 570
>ref|XM_476412.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 1225 ctccagcagcagcagctgca 1244
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cagcagcagcagctgcatct 156 |||||||||||||||||||| Sbjct: 185278 cagcagcagcagctgcatct 185297
>gb|AY685231.1| Neurospora crassa F-box/WD-40 repeat-containing protein (fwd-1) mRNA, complete cds Length = 3033 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 ||||||||||||||||| |||||| Sbjct: 2675 cggcaacggcaacggcaacggcgg 2698
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence Length = 170975 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggcaacggcaacggcagcgg 258 |||||||||||||||||||| Sbjct: 145628 ggcaacggcaacggcagcgg 145647
>ref|XM_323892.1| Neurospora crassa OR74A hypothetical protein (NCU04540.1) partial mRNA Length = 3033 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 ||||||||||||||||| |||||| Sbjct: 2675 cggcaacggcaacggcaacggcgg 2698
>ref|XM_423720.1| PREDICTED: Gallus gallus similar to zinc finger protein Cezanne; cellular zinc finger anti-NF-kappaB Cezanne (LOC426041), mRNA Length = 4770 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 128 caccatctccagcagcagcagctg 151 |||| ||||||||||||||||||| Sbjct: 3042 caccttctccagcagcagcagctg 3019
>ref|XM_364320.1| Magnaporthe grisea 70-15 predicted protein (MG09165.4) partial mRNA Length = 1833 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcg 257 |||||||||||||||||||| Sbjct: 585 cggcaacggcaacggcagcg 604
>ref|XM_367042.1| Magnaporthe grisea 70-15 chromosome V hypothetical protein (MG10672.4) partial mRNA Length = 2118 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 agcggcaacggcaacggcagcggc 259 ||||||| |||||||||||||||| Sbjct: 334 agcggcagcggcaacggcagcggc 357
>ref|XM_877846.1| PREDICTED: Bos taurus similar to sal-like 4, transcript variant 2 (LOC541170), mRNA Length = 2147 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 767 ctccagcagcagcagctgca 786
>ref|XM_614880.2| PREDICTED: Bos taurus similar to sal-like 4, transcript variant 1 (LOC541170), mRNA Length = 3473 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 767 ctccagcagcagcagctgca 786
>ref|NM_207225.1| Mus musculus histone deacetylase 4 (Hdac4), mRNA Length = 3960 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tccagcagcagcagctgcatctca 158 ||||||||||||||||||| |||| Sbjct: 1600 tccagcagcagcagctgcacctca 1623
>ref|XM_950887.1| Neurospora crassa OR74A hypothetical protein (NCU04540.1) partial mRNA Length = 3033 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 ||||||||||||||||| |||||| Sbjct: 2675 cggcaacggcaacggcaacggcgg 2698
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ggcggcggctctccgttcggcggc 199 ||||||||||||||| |||||||| Sbjct: 50768 ggcggcggctctccggtcggcggc 50791
>ref|XM_715743.1| Candida albicans SC5314 tRNA splicing ligase Trl1p (CaO19_13864), mRNA Length = 2499 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 aacagcggcaacggcaacggcagcggcg 260 |||| ||||||||||||||||| ||||| Sbjct: 432 aacaacggcaacggcaacggcaacggcg 459
>ref|XM_972748.1| PREDICTED: Mus musculus expressed sequence N28178, transcript variant 3 (N28178), mRNA Length = 6494 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ccatctccagcagcagcagc 149 |||||||||||||||||||| Sbjct: 34 ccatctccagcagcagcagc 15
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagca 147 ||||||||||| |||||||||||| Sbjct: 28069 ccatcaccatcaccagcagcagca 28092
>gb|AF518566.1| Glycine max methionine synthase mRNA, complete cds Length = 2695 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gtgagcttgctctgatttcc 280 |||||||||||||||||||| Sbjct: 1940 gtgagcttgctctgatttcc 1921
>ref|XM_751971.1| Ustilago maydis 521 hypothetical protein (UM00917.1) partial mRNA Length = 627 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 ||||||||||||||||||| |||| Sbjct: 76 cggcaacggcaacggcagcagcgg 99
>ref|XM_742875.1| Aspergillus fumigatus Af293 class III chitinase ChiA1 (Afu5g03760) partial mRNA Length = 2667 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcgg 258 ||||||||||||||| |||||||| Sbjct: 1851 cagcggcaacggcaatggcagcgg 1874
>ref|XM_539928.2| PREDICTED: Canis familiaris similar to PAX interacting (with transcription-activation domain) protein 1 (LOC482813), mRNA Length = 3597 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 caccatctccagcagcagcagctg 151 ||||| |||||||||||||||||| Sbjct: 1801 caccagctccagcagcagcagctg 1824
>gb|AC123867.4| Mus musculus BAC clone RP23-127O13 from chromosome 14, complete sequence Length = 216834 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ccatcaccatctccagcagcagca 147 ||||||||||| |||||||||||| Sbjct: 183151 ccatcaccatcaccagcagcagca 183128
>ref|XM_807395.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507811.50) partial mRNA Length = 888 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 gactgcaggatggaggcgagaacg 317 ||||||||||||||||| |||||| Sbjct: 101 gactgcaggatggaggcaagaacg 78
>ref|XM_808843.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506177.60) partial mRNA Length = 3291 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggca 254 |||||||||||||||||||| Sbjct: 2748 cagcggcaacggcaacggca 2767
>ref|XM_883733.1| Candida albicans SC5314 hypothetical protein (CaJ7.0238) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 aacagcggcaacggcaacggcagcggcg 260 |||| ||||||||||||||||| ||||| Sbjct: 432 aacaacggcaacggcaacggcaacggcg 459
>ref|XM_716256.1| Candida albicans SC5314 tRNA splicing ligase Trl1p (TRL1) partial mRNA Length = 2499 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 aacagcggcaacggcaacggcagcggcg 260 |||| ||||||||||||||||| ||||| Sbjct: 432 aacaacggcaacggcaacggcaacggcg 459
>gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, complete sequence Length = 213989 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cggcggccacggcaccaagc 212 |||||||||||||||||||| Sbjct: 162754 cggcggccacggcaccaagc 162773
>gb|AY217659.1| Aspergillus fumigatus strain ATCC 13073 chitinase (chiA1) gene, complete cds Length = 4944 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcgg 258 ||||||||||||||| |||||||| Sbjct: 2963 cagcggcaacggcaatggcagcgg 2986
>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence Length = 231668 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagca 147 ||||||||||| |||||||||||| Sbjct: 172912 ccatcaccatcaccagcagcagca 172935
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||| Sbjct: 2559241 gcggcaacggcaacggccgcggcg 2559218
>gb|AF315345.1| Hypericum androsaemum chalcone synthase mRNA, complete cds Length = 1402 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tccacggtcaccatcttcct 100 |||||||||||||||||||| Sbjct: 89 tccacggtcaccatcttcct 70
>gb|AF186371.1| Streptomyces coelicolor A3(2) AhpD (ahpD), AhpC (ahpC), and OxyR (oxyR) genes, complete cds Length = 3014 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gaccgaggggccgcccggccgggt 350 ||||||||| |||||||||||||| Sbjct: 2804 gaccgagggaccgcccggccgggt 2781
>gb|AC102876.31| Mus musculus chromosome 1, clone RP24-492P7, complete sequence Length = 185929 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cttgctctgatttccccttc 285 |||||||||||||||||||| Sbjct: 73350 cttgctctgatttccccttc 73369
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 gaccgaggggccgcccggccgggt 350 ||||||||| |||||||||||||| Sbjct: 99543 gaccgagggaccgcccggccgggt 99520
>emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 57 Length = 199577 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 2 agaggaacgagagagaag-tgaggaaga 28 |||||||||||||||||| ||||||||| Sbjct: 193242 agaggaacgagagagaagatgaggaaga 193269
>emb|AL021635.1|ATT12H17 Arabidopsis thaliana DNA chromosome 4, BAC clone T12H17 (ESSAII project) Length = 89350 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 2 agaggaacgagagagaag-tgaggaaga 28 |||||||||||||||||| ||||||||| Sbjct: 49573 agaggaacgagagagaagatgaggaaga 49600
>emb|AL662846.18| Mouse DNA sequence from clone RP23-399N2 on chromosome 11 Contains a zinc finger protein of the cerebellum 5 (Zic5) pseudogene, complete sequence Length = 189287 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 ccatcaccatctccagcagcagca 147 |||||||||||| ||||||||||| Sbjct: 123906 ccatcaccatctgcagcagcagca 123929
>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence Length = 230502 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 ccatcaccatctccagcagcagca 147 ||||||||||| |||||||||||| Sbjct: 61694 ccatcaccatcaccagcagcagca 61671
>gb|AC162181.2| Mus musculus BAC clone RP23-49J15 from chromosome 12, complete sequence Length = 215236 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 ttccatcaccatctccagcagcagcagc 149 |||||| ||| ||||||||||||||||| Sbjct: 149531 ttccataaccttctccagcagcagcagc 149558
>emb|CR624146.1| full-length cDNA clone CS0DL009YP04 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1289 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 718 atctccagcagcagcagctg 699
>emb|CR623253.1| full-length cDNA clone CS0DJ008YB21 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1200 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 646 atctccagcagcagcagctg 627
>emb|CR622912.1| full-length cDNA clone CS0DC012YO21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1340 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 769 atctccagcagcagcagctg 750
>emb|CR608731.1| full-length cDNA clone CS0DK007YJ04 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1405 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 856 atctccagcagcagcagctg 837
>emb|CR605810.1| full-length cDNA clone CL0BB018ZD02 of Neuroblastoma of Homo sapiens (human) Length = 1358 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 775 atctccagcagcagcagctg 756
>emb|CR605533.1| full-length cDNA clone CS0DB001YI09 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1419 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 850 atctccagcagcagcagctg 831
>emb|CR597523.1| full-length cDNA clone CS0DL007YM10 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1531 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 979 atctccagcagcagcagctg 960
>emb|CR595273.1| full-length cDNA clone CS0DK008YH17 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1304 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 748 atctccagcagcagcagctg 729
>emb|CR593165.1| full-length cDNA clone CS0DL003YB14 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 776 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 188 atctccagcagcagcagctg 169
>gb|AC103891.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1175C11, complete sequence Length = 123620 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 ccatctccagcagcagcagctgca 153 ||||| |||||||||||||||||| Sbjct: 116594 ccatcaccagcagcagcagctgca 116571
>dbj|AB210221.1| Setaria italica GBSS1 gene, transposable element TSI-9 in exon 10 Length = 10170 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gactgcaggatggaggcgag 313 |||||||||||||||||||| Sbjct: 4020 gactgcaggatggaggcgag 4039
>dbj|AK155250.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630211K20 product:Similar to histone deacetylase 4 homolog [Homo sapiens], full insert sequence Length = 4123 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tccagcagcagcagctgcatctca 158 ||||||||||||||||||| |||| Sbjct: 1786 tccagcagcagcagctgcacctca 1809
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 514984 ctccagcagcagcagctgca 514965
>gb|BC102971.1| Bos taurus hypothetical protein LOC613305, mRNA (cDNA clone MGC:128193 IMAGE:7960756), complete cds Length = 1368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 730 atctccagcagcagcagctg 711
>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR30J04, complete sequence Length = 177277 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggcaacggcaacggcagcgg 258 |||||||||||||||||||| Sbjct: 57562 ggcaacggcaacggcagcgg 57581
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 156463 atctccagcagcagcagctg 156482
>dbj|AK029933.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932408F19 product:Similar to histone deacetylase 4 homolog [Homo sapiens], full insert sequence Length = 3289 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tccagcagcagcagctgcatctca 158 ||||||||||||||||||| |||| Sbjct: 1137 tccagcagcagcagctgcacctca 1160
>gb|AY771780.1| Simian adenovirus 1 strain ATCC VR-195, complete genome Length = 34450 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcgg 258 |||||||| ||||||||||||||| Sbjct: 24702 cagcggcagcggcaacggcagcgg 24725
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||| Sbjct: 10077860 gcggcaacggcaacggcggcggcg 10077883 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 779620 ctccagcagcagcagctgca 779601
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ggcggcggctctccgttcggcggc 199 ||||||||||||||| |||||||| Sbjct: 26199720 ggcggcggctctccggtcggcggc 26199743
>gb|AC072062.3| Homo sapiens BAC clone RP11-548N17 from 2, complete sequence Length = 219399 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 gagagagaagtgaggaagaaagaa 33 |||||||||| ||||||||||||| Sbjct: 21125 gagagagaagagaggaagaaagaa 21148
>gb|AC154745.3| Mus musculus BAC clone RP24-395F6 from chromosome 13, complete sequence Length = 144172 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gagagagaagtgaggaagaaagaa 33 |||||||||||| ||||||||||| Sbjct: 101087 gagagagaagtggggaagaaagaa 101064
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cagcggcaacggcaacggca 254 |||||||||||||||||||| Sbjct: 99968 cagcggcaacggcaacggca 99949
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 238 cggcaacggcaacggcagcggcgg 261 ||||||||||||||||| |||||| Sbjct: 7055281 cggcaacggcaacggcaacggcgg 7055258
>ref|XM_214245.3| PREDICTED: Rattus norvegicus pam, highwire, rpm 1 (predicted) (Phr1_predicted), mRNA Length = 14954 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cagcagcagcagctgcatct 156 |||||||||||||||||||| Sbjct: 6998 cagcagcagcagctgcatct 7017
>gb|AY087876.1| Arabidopsis thaliana clone 39135 mRNA, complete sequence Length = 1299 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 agaggaacgagagagaag-tgaggaaga 28 |||||||||||||||||| ||||||||| Sbjct: 280 agaggaacgagagagaagatgaggaaga 253
>ref|XM_343629.2| PREDICTED: Rattus norvegicus histone deacetylase 4 (predicted) (Hdac4_predicted), mRNA Length = 5089 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tccagcagcagcagctgcatctca 158 ||||||||||||||||||| |||| Sbjct: 2759 tccagcagcagcagctgcacctca 2782
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 |||||||||||||||||| ||||| Sbjct: 27162 gcggcaacggcaacggcaacggcg 27139
>gb|AF225422.1|AF225422 Homo sapiens AD023 mRNA, complete cds Length = 1448 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 848 atctccagcagcagcagctg 829
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 |||||||||||||||||| ||||| Sbjct: 117498 gcggcaacggcaacggcaacggcg 117475
>gb|AC135157.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1017C11, complete sequence Length = 166072 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 ccatctccagcagcagcagctgca 153 ||||| |||||||||||||||||| Sbjct: 132368 ccatcaccagcagcagcagctgca 132391
>gb|AC025160.29| Homo sapiens 12 BAC RP11-526P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159691 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 caccatctccagcagcagca 147 |||||||||||||||||||| Sbjct: 88936 caccatctccagcagcagca 88955
>dbj|AP005800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016D04 Length = 147313 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 acagcggcaacggcaacggcagcggcgg 261 ||||||||||| ||| |||||||||||| Sbjct: 23727 acagcggcaacagcagcggcagcggcgg 23754
>dbj|AP003999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_A05 Length = 113326 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 acagcggcaacggcaacggcagcggcgg 261 ||||||||||| ||| |||||||||||| Sbjct: 109590 acagcggcaacagcagcggcagcggcgg 109617
>gb|L13380.1|YSATRNALIG Candida albicans transfer RNA ligase gene, complete cds Length = 2763 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 aacagcggcaacggcaacggcagcggcg 260 |||| ||||||||||||||||| ||||| Sbjct: 552 aacaacggcaacggcaacggcaacggcg 579
>dbj|AP005893.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0030K05 Length = 157835 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||| Sbjct: 68601 gcggcaacggcaacggcggcggcg 68578
>dbj|AP005878.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0012I09 Length = 127774 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 237 gcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||| Sbjct: 112453 gcggcaacggcaacggcggcggcg 112430
>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1008E06 Length = 170228 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gagagagaagtgaggaagaa 29 |||||||||||||||||||| Sbjct: 86894 gagagagaagtgaggaagaa 86875
>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0029G06 Length = 169711 Score = 40.1 bits (20), Expect = 7.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 347 gggtccaagaacaagcccaagcccccaatcatcattacgcgggacagc 394 ||||| ||||||||||| ||||| || | ||||| |||||||||||| Sbjct: 48577 gggtcgaagaacaagccgaagccgccggtgatcatcacgcgggacagc 48624
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 237 gcggcaacggcaacggcagcggcg 260 ||||||||||||||||| |||||| Sbjct: 50536 gcggcaacggcaacggcggcggcg 50559
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 99427 ctccagcagcagcagctgca 99408
>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A18 Length = 176755 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gagagaagtgaggaagaaagaata 35 ||||||||||||||||| |||||| Sbjct: 116321 gagagaagtgaggaagagagaata 116298
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 12 gagagaagtgaggaagaaagaata 35 ||||||||||||||||| |||||| Sbjct: 6482 gagagaagtgaggaagagagaata 6459
>dbj|AK119841.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-C10, full insert sequence Length = 2363 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggca 254 |||||||||||||||||||| Sbjct: 1891 cagcggcaacggcaacggca 1910
>dbj|AK110407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-G08, full insert sequence Length = 2605 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 cagcggcaacggcaacggcagcggcggt 262 |||||||| ||||| ||||||||||||| Sbjct: 1184 cagcggcagcggcagcggcagcggcggt 1211
>dbj|AK106306.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-C10, full insert sequence Length = 2510 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 ccatctccagcagcagcagctgca 153 ||||| |||||||||||||||||| Sbjct: 927 ccatcaccagcagcagcagctgca 904
>dbj|AK102668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101O03, full insert sequence Length = 1461 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 1225 ctccagcagcagcagctgca 1244
>dbj|AK099395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J11, full insert sequence Length = 1857 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 |||||||||||||||| ||||||| Sbjct: 806 cggcaacggcaacggcggcggcgg 829
>ref|NM_210948.1| Eremothecium gossypii AFR047Wp (AFR047W), mRNA Length = 777 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ctccagcagcagcagctgca 153 |||||||||||||||||||| Sbjct: 183 ctccagcagcagcagctgca 164
>gb|AY035393.1| Arabidopsis thaliana putative sterol 4-alpha-methyl-oxidase mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 7.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 2 agaggaacgagagagaag-tgaggaaga 28 |||||||||||||||||| ||||||||| Sbjct: 161 agaggaacgagagagaagatgaggaaga 134
>gb|BC066052.1| Mus musculus histone deacetylase 4, mRNA (cDNA clone MGC:91339 IMAGE:6827645), complete cds Length = 3960 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tccagcagcagcagctgcatctca 158 ||||||||||||||||||| |||| Sbjct: 1600 tccagcagcagcagctgcacctca 1623
>dbj|AK061613.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-B07, full insert sequence Length = 1729 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 |||||||||||||||| ||||||| Sbjct: 800 cggcaacggcaacggcggcggcgg 823
>emb|X14898.1|CSP7PIN Hamster p7 preinsertion DNA Length = 1768 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ccatctccagcagcagcagc 149 |||||||||||||||||||| Sbjct: 1694 ccatctccagcagcagcagc 1675
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 ggcaacggcaacggcagcgg 258 |||||||||||||||||||| Sbjct: 22859 ggcaacggcaacggcagcgg 22878
>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence Length = 255342 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tccagcagcagcagctgcatctca 158 ||||||||||||||||||| |||| Sbjct: 80082 tccagcagcagcagctgcacctca 80105
>emb|CT010449.10| Mouse DNA sequence from clone RP23-347O24 on chromosome 12, complete sequence Length = 203697 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 122 ttccatcaccatctccagcagcagcagc 149 |||||| ||| ||||||||||||||||| Sbjct: 12624 ttccataaccttctccagcagcagcagc 12651
>gb|BC033759.1| Homo sapiens MIF4G domain containing, mRNA (cDNA clone MGC:45027 IMAGE:5215495), complete cds Length = 1340 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 731 atctccagcagcagcagctg 712
>ref|NM_020679.2| Homo sapiens MIF4G domain containing (MIF4GD), mRNA Length = 1433 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 824 atctccagcagcagcagctg 805
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 cggcaacggcaacggcagcggcgg 261 |||||||||||||||| ||||||| Sbjct: 89063 cggcaacggcaacggcggcggcgg 89086
>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence Length = 212626 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 ggcaacggcaacggcagcggcggt 262 |||||||||||||||| ||||||| Sbjct: 137895 ggcaacggcaacggcaacggcggt 137872
>emb|CT025551.9| Mouse DNA sequence from clone RP23-414I10 on chromosome 13, complete sequence Length = 196737 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 gagagagaagtgaggaagaaagaa 33 |||||||||||| ||||||||||| Sbjct: 110936 gagagagaagtggggaagaaagaa 110913
>gb|BC059676.1| Danio rerio phosphatidylinositol glycan, class P, mRNA (cDNA clone MGC:73366 IMAGE:4145969), complete cds Length = 1440 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccatcaccatctccagcagc 143 |||||||||||||||||||| Sbjct: 32 ccatcaccatctccagcagc 13
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 233 aacagcggcaacggcaacggcagcggcg 260 |||| ||||||||||||||||| ||||| Sbjct: 458658 aacaacggcaacggcaacggcaacggcg 458685
>ref|NM_001034732.1| Bos taurus hypothetical protein LOC613305 (MGC128193), mRNA Length = 1368 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 atctccagcagcagcagctg 151 |||||||||||||||||||| Sbjct: 730 atctccagcagcagcagctg 711
>ref|NM_199712.1| Danio rerio phosphatidylinositol glycan, class P (pigp), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ccatcaccatctccagcagc 143 |||||||||||||||||||| Sbjct: 32 ccatcaccatctccagcagc 13
>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence Length = 107205 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 cagcagcagcagctgcatct 156 |||||||||||||||||||| Sbjct: 73991 cagcagcagcagctgcatct 74010
>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete sequence Length = 208030 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ccatctccagcagcagcagc 149 |||||||||||||||||||| Sbjct: 52935 ccatctccagcagcagcagc 52916
>emb|AL831725.5| Mouse DNA sequence from clone RP23-106P7 on chromosome X, complete sequence Length = 174712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 ccagcagcagcagctgcatc 155 |||||||||||||||||||| Sbjct: 86652 ccagcagcagcagctgcatc 86671
>emb|AL845498.9| Mouse DNA sequence from clone RP23-222D20 on chromosome 2, complete sequence Length = 154935 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cagcagcagcagctgcatct 156 |||||||||||||||||||| Sbjct: 63974 cagcagcagcagctgcatct 63955 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,645,724 Number of Sequences: 3902068 Number of extensions: 4645724 Number of successful extensions: 139016 Number of sequences better than 10.0: 214 Number of HSP's better than 10.0 without gapping: 220 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 135594 Number of HSP's gapped (non-prelim): 3386 length of query: 556 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 533 effective length of database: 17,143,297,704 effective search space: 9137377676232 effective search space used: 9137377676232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
