ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart21c12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009444.1| Triticum aestivum clone wlmk8.pk0004.f6:fis, full insert mRNA sequence Length = 1858 Score = 848 bits (428), Expect = 0.0 Identities = 508/534 (95%), Gaps = 7/534 (1%) Strand = Plus / Plus Query: 22 cttctctgcat--accaagaagtcgcctccgttgccttcctccagcagtgcgcgcccctc 79 ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 cttctctgcatccaccaagaagtcgcctccgttgctttcctccagcagtgcgcgcccctc 60 Query: 80 ccctcctctcgagatcttctccgagttgctgagatctggttgtaagcagccaagatggtg 139 | ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 61 c-----tctcgagatcttctccgagttcctgagatctggttgtaagcagccaagatggtg 115 Query: 140 aagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcattgccatc 199 ||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 116 aagatctgctgcatcggagctggctacgtcggcggcccaaccatggctgtcattgccatc 175 Query: 200 aagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgacgcctgg 259 |||||||| || |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 176 aagtgcccggcgattgaggtggtggttgtggacatctccaagccccgcattgacgcctgg 235 Query: 260 aacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcctgcagg 319 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 236 aacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtcaaggcctgcagg 295 Query: 320 ggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgacatcatc 379 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 296 gggaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgacatcatc 355 Query: 380 ttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggctgccgac 439 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 356 ttcgtctccgtgaacacccccaccaagacccgcggtctgggagccggcaaggctgccgac 415 Query: 440 ctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggancagatc 499 |||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 416 ctcacctactgggagagcgccgcccggatgatcgccgacgtgtccaagtccgacaagatc 475 Query: 500 gtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 476 gtcgtcgagaagtccaccgtccctgtcaagaccgccgaggccattgagaagatc 529
>gb|AY103689.1| Zea mays PCO113568 mRNA sequence Length = 1967 Score = 533 bits (269), Expect = e-148 Identities = 385/424 (90%) Strand = Plus / Plus Query: 130 caagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgt 189 |||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 169 caagatggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggctgt 228 Query: 190 cattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcat 249 ||||||| | |||||||||| |||||||| || || || |||||||||||||||||||| Sbjct: 229 cattgccctaaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcat 288 Query: 250 tgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaa 309 ||| || |||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 289 tgaggcatggaacagcgacaccctcccgatctacgagcccggcctcgatgatgttgtgaa 348 Query: 310 ggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggc 369 | |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 349 gcagtgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggc 408 Query: 370 cgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaa 429 ||||||||||||||||| || ||||||||||||||||||||||| || ||||| ||||| Sbjct: 409 tgacatcatcttcgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaa 468 Query: 430 ggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtc 489 |||||||||||||||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 469 ggctgccgacctcacctactgggagagcgctgctcgtatgatcgccgatgtctccaagtc 528 Query: 490 ggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaa 549 || ||||||| |||||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 529 tgacaagatcgttgtcgagaagtccaccgtccctgtcaagaccgctgaggctattgagaa 588 Query: 550 gatc 553 |||| Sbjct: 589 gatc 592
>gb|AF503433.1| Sorghum bicolor BAC 170F8, complete sequence Length = 142376 Score = 478 bits (241), Expect = e-131 Identities = 378/424 (89%) Strand = Plus / Plus Query: 130 caagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgt 189 |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| || Sbjct: 141722 caagatggtgaagatctgctgcatcggtgctggctatgtcggtggcccgaccatggccgt 141781 Query: 190 cattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcat 249 ||||||| |||||||||||| |||||||| || || || |||||||||||||||||||| Sbjct: 141782 cattgccctcaagtgcccagacattgaggttgtcgttgttgacatctccaagccccgcat 141841 Query: 250 tgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaa 309 ||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| || Sbjct: 141842 tgaggcctggaacagtgacaccctcccgatctacgagcctggtctcgatgatgttgtgaa 141901 Query: 310 ggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggc 369 | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 141902 gcagtgcaggggcaagaacctcttcttcagcactgatgttgagaagcacgtcgctgaggc 141961 Query: 370 cgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaa 429 ||||| ||||| ||||| || ||||||||||||||||||||||| || ||||| ||||| Sbjct: 141962 tgacattatctttgtctcggtgaacacccccaccaagacccgtggacttggagctggcaa 142021 Query: 430 ggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtc 489 ||||||||||||||||||||||||||| || || || |||||||| ||||| || ||||| Sbjct: 142022 ggctgccgacctcacctactgggagagtgctgctcgtatgatcgctgatgtctctaagtc 142081 Query: 490 ggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaa 549 || |||| || || ||||||||||| ||||| |||||||| || ||||| |||||||| Sbjct: 142082 tgacaagattgttgttgagaagtccactgtccctgtcaagactgctgaggctattgagaa 142141 Query: 550 gatc 553 |||| Sbjct: 142142 gatc 142145
>gb|BT016824.1| Zea mays clone Contig657 mRNA sequence Length = 1951 Score = 470 bits (237), Expect = e-129 Identities = 374/420 (89%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 |||||||||||||||||||||||||||||||| ||||| ||||| || ||||| |||||| Sbjct: 170 atggtgaagatctgctgcatcggtgctggctatgtcggtggcccaaccatggccgtcatt 229 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 ||| |||||||||||| |||||||| || ||||| ||||||||||||||||||||||| Sbjct: 230 gccctcaagtgcccagacattgaggtcgtcgtcgttgacatctccaagccccgcattgag 289 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||| |||||||| || |||||||||||||| |||||||||||||| ||| Sbjct: 290 gcctggaacagtgacaccctgccaatctacgagcctggtctcgatgatgttgtgaagcag 349 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 |||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||| Sbjct: 350 tgcaggggcaggaacctcttcttcagcactgatgttgagaagcacgtcgctgaggctgac 409 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 || ||||| ||||| || ||||||||||||||||||||||| || ||||| ||||||||| Sbjct: 410 attatctttgtctcggtgaacacccccaccaagacccgtgggcttggagctggcaaggct 469 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 |||||||||||||||||||||||||| ||||| ||||| || ||||| |||||||| || Sbjct: 470 gccgacctcacctactgggagagcgctgcccgcatgattgcggatgtctccaagtctgac 529 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||| || || ||||||||||| ||||| ||||||||||| ||||| |||||||||||| Sbjct: 530 aagattgttgttgagaagtccactgtccctgtcaagaccgctgaggctattgagaagatc 589
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 452 bits (228), Expect = e-124 Identities = 374/423 (88%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 14932993 aagatggtgaagatctgctgcattggagctggctatgtcggcggcccaaccatggccgtc 14933052 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 |||||| |||| ||||||||||| ||||||||||| || ||||| |||||||| |||||| Sbjct: 14933053 attgccctcaaatgcccagcaatcgaggtggtggttgttgacatttccaagcctcgcatt 14933112 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 || |||||||||||||| ||||||||||||||||||||||||||||| || || ||| Sbjct: 14933113 gatgcctggaacagcgaacagctcccgatctacgagcctggcctcgatgaggtcgtgaag 14933172 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14933173 gagtgcagaggcaggaacctcttcttcagcactgatgtggagaagcatgtcgccgaggcg 14933232 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 14933233 aacatcatctttgtatctgtcaacacccccaccaagacccgtggtcttggagcaggcaag 14933292 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 ||||| ||||||||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 14933293 gctgctgacctcacctactgggaaagtgctgctcggatgattgctgatgtctccaagtct 14933352 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 14933353 gacaagatcgttgttgagaagtccactgtccctgtcaagactgcagaggccattgagaag 14933412 Query: 551 atc 553 ||| Sbjct: 14933413 atc 14933415 Score = 432 bits (218), Expect = e-118 Identities = 379/433 (87%) Strand = Plus / Plus Query: 121 gtaagcagccaagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgac 180 |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 14938859 gtaagcaggaaagatggtgaagatctgctgcatcggagctggatatgtcggcggcccaac 14938918 Query: 181 aatggctgtcattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaa 240 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 14938919 catggctgtcattgccctcaaatgcccagcaattgaggtggtggttgttgacatctccaa 14938978 Query: 241 gccccgcattgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatga 300 ||| ||| |||| ||||||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 14938979 gcctcgcgttgatgcctggaacagcgaccagctcccaatctacgagcccggtcttgatga 14939038 Query: 301 tgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||||| |||| |||||||||| ||||||||||||||| || || || ||||||||||| Sbjct: 14939039 ggttgtgaaggaatgcaggggcaggaacctcttcttcagtacggacgtcgagaagcatgt 14939098 Query: 361 cgccgaggccgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctggg 420 ||| ||||| |||||||| || || || ||||||||||| |||||||||||||| || || Sbjct: 14939099 cgctgaggcagacatcatttttgtgtctgtcaacacccctaccaagacccgtggacttgg 14939158 Query: 421 agccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgt 480 ||| ||||||||||| |||||||||||||||||||| || || |||||||| || ||||| Sbjct: 14939159 agcaggcaaggctgctgacctcacctactgggagagtgctgctcggatgattgctgatgt 14939218 Query: 481 gtccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggc 540 |||||||| || ||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 14939219 ctccaagtctgacaagatcgttgttgagaagtccactgtccctgtcaagaccgcagaggc 14939278 Query: 541 cattgagaagatc 553 ||||||||||||| Sbjct: 14939279 cattgagaagatc 14939291
>dbj|AK105768.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E05, full insert sequence Length = 1865 Score = 452 bits (228), Expect = e-124 Identities = 374/423 (88%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 118 aagatggtgaagatctgctgcattggagctggctatgtcggcggcccaaccatggccgtc 177 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 |||||| |||| ||||||||||| ||||||||||| || ||||| |||||||| |||||| Sbjct: 178 attgccctcaaatgcccagcaatcgaggtggtggttgttgacatttccaagcctcgcatt 237 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 || |||||||||||||| ||||||||||||||||||||||||||||| || || ||| Sbjct: 238 gatgcctggaacagcgaacagctcccgatctacgagcctggcctcgatgaggtcgtgaag 297 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 298 gagtgcagaggcaggaacctcttcttcagcactgatgtggagaagcatgtcgccgaggcg 357 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 358 aacatcatctttgtatctgtcaacacccccaccaagacccgtggtcttggagcaggcaag 417 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 ||||| ||||||||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 418 gctgctgacctcacctactgggaaagtgctgctcggatgattgctgatgtctccaagtct 477 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 478 gacaagatcgttgttgagaagtccactgtccctgtcaagactgcagaggccattgagaag 537 Query: 551 atc 553 ||| Sbjct: 538 atc 540
>dbj|AK104003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H11, full insert sequence Length = 1852 Score = 452 bits (228), Expect = e-124 Identities = 374/423 (88%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 118 aagatggtgaagatctgctgcattggagctggctatgtcggcggcccaaccatggccgtc 177 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 |||||| |||| ||||||||||| ||||||||||| || ||||| |||||||| |||||| Sbjct: 178 attgccctcaaatgcccagcaatcgaggtggtggttgttgacatttccaagcctcgcatt 237 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 || |||||||||||||| ||||||||||||||||||||||||||||| || || ||| Sbjct: 238 gatgcctggaacagcgaacagctcccgatctacgagcctggcctcgatgaggtcgtgaag 297 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 298 gagtgcagaggcaggaacctcttcttcagcactgatgtggagaagcatgtcgccgaggcg 357 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 358 aacatcatctttgtatctgtcaacacccccaccaagacccgtggtcttggagcaggcaag 417 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 ||||| ||||||||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 418 gctgctgacctcacctactgggaaagtgctgctcggatgattgctgatgtctccaagtct 477 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 478 gacaagatcgttgttgagaagtccactgtccctgtcaagactgcagaggccattgagaag 537 Query: 551 atc 553 ||| Sbjct: 538 atc 540
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 452 bits (228), Expect = e-124 Identities = 374/423 (88%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 14887276 aagatggtgaagatctgctgcattggagctggctatgtcggcggcccaaccatggccgtc 14887335 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 |||||| |||| ||||||||||| ||||||||||| || ||||| |||||||| |||||| Sbjct: 14887336 attgccctcaaatgcccagcaatcgaggtggtggttgttgacatttccaagcctcgcatt 14887395 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 || |||||||||||||| ||||||||||||||||||||||||||||| || || ||| Sbjct: 14887396 gatgcctggaacagcgaacagctcccgatctacgagcctggcctcgatgaggtcgtgaag 14887455 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 14887456 gagtgcagaggcaggaacctcttcttcagcactgatgtggagaagcatgtcgccgaggcg 14887515 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 14887516 aacatcatctttgtatctgtcaacacccccaccaagacccgtggtcttggagcaggcaag 14887575 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 ||||| ||||||||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 14887576 gctgctgacctcacctactgggaaagtgctgctcggatgattgctgatgtctccaagtct 14887635 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 14887636 gacaagatcgttgttgagaagtccactgtccctgtcaagactgcagaggccattgagaag 14887695 Query: 551 atc 553 ||| Sbjct: 14887696 atc 14887698 Score = 432 bits (218), Expect = e-118 Identities = 379/433 (87%) Strand = Plus / Plus Query: 121 gtaagcagccaagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgac 180 |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 14893142 gtaagcaggaaagatggtgaagatctgctgcatcggagctggatatgtcggcggcccaac 14893201 Query: 181 aatggctgtcattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaa 240 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 14893202 catggctgtcattgccctcaaatgcccagcaattgaggtggtggttgttgacatctccaa 14893261 Query: 241 gccccgcattgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatga 300 ||| ||| |||| ||||||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 14893262 gcctcgcgttgatgcctggaacagcgaccagctcccaatctacgagcccggtcttgatga 14893321 Query: 301 tgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||||| |||| |||||||||| ||||||||||||||| || || || ||||||||||| Sbjct: 14893322 ggttgtgaaggaatgcaggggcaggaacctcttcttcagtacggacgtcgagaagcatgt 14893381 Query: 361 cgccgaggccgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctggg 420 ||| ||||| |||||||| || || || ||||||||||| |||||||||||||| || || Sbjct: 14893382 cgctgaggcagacatcatttttgtgtctgtcaacacccctaccaagacccgtggacttgg 14893441 Query: 421 agccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgt 480 ||| ||||||||||| |||||||||||||||||||| || || |||||||| || ||||| Sbjct: 14893442 agcaggcaaggctgctgacctcacctactgggagagtgctgctcggatgattgctgatgt 14893501 Query: 481 gtccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggc 540 |||||||| || ||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 14893502 ctccaagtctgacaagatcgttgttgagaagtccactgtccctgtcaagaccgcagaggc 14893561 Query: 541 cattgagaagatc 553 ||||||||||||| Sbjct: 14893562 cattgagaagatc 14893574
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 452 bits (228), Expect = e-124 Identities = 374/423 (88%) Strand = Plus / Minus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||||| || |||||||| ||||||||||| || ||||| ||| Sbjct: 148854 aagatggtgaagatctgctgcattggagctggctatgtcggcggcccaaccatggccgtc 148795 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 |||||| |||| ||||||||||| ||||||||||| || ||||| |||||||| |||||| Sbjct: 148794 attgccctcaaatgcccagcaatcgaggtggtggttgttgacatttccaagcctcgcatt 148735 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 || |||||||||||||| ||||||||||||||||||||||||||||| || || ||| Sbjct: 148734 gatgcctggaacagcgaacagctcccgatctacgagcctggcctcgatgaggtcgtgaag 148675 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 148674 gagtgcagaggcaggaacctcttcttcagcactgatgtggagaagcatgtcgccgaggcg 148615 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||| || || ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 148614 aacatcatctttgtatctgtcaacacccccaccaagacccgtggtcttggagcaggcaag 148555 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 ||||| ||||||||||||||||| || || || |||||||| || ||||| |||||||| Sbjct: 148554 gctgctgacctcacctactgggaaagtgctgctcggatgattgctgatgtctccaagtct 148495 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||| || ||||||||||| ||||| |||||||| |||||||||||||||||| Sbjct: 148494 gacaagatcgttgttgagaagtccactgtccctgtcaagactgcagaggccattgagaag 148435 Query: 551 atc 553 ||| Sbjct: 148434 atc 148432 Score = 432 bits (218), Expect = e-118 Identities = 379/433 (87%) Strand = Plus / Minus Query: 121 gtaagcagccaagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgac 180 |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 142988 gtaagcaggaaagatggtgaagatctgctgcatcggagctggatatgtcggcggcccaac 142929 Query: 181 aatggctgtcattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaa 240 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 142928 catggctgtcattgccctcaaatgcccagcaattgaggtggtggttgttgacatctccaa 142869 Query: 241 gccccgcattgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatga 300 ||| ||| |||| ||||||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 142868 gcctcgcgttgatgcctggaacagcgaccagctcccaatctacgagcccggtcttgatga 142809 Query: 301 tgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||||| |||| |||||||||| ||||||||||||||| || || || ||||||||||| Sbjct: 142808 ggttgtgaaggaatgcaggggcaggaacctcttcttcagtacggacgtcgagaagcatgt 142749 Query: 361 cgccgaggccgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctggg 420 ||| ||||| |||||||| || || || ||||||||||| |||||||||||||| || || Sbjct: 142748 cgctgaggcagacatcatttttgtgtctgtcaacacccctaccaagacccgtggacttgg 142689 Query: 421 agccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgt 480 ||| ||||||||||| |||||||||||||||||||| || || |||||||| || ||||| Sbjct: 142688 agcaggcaaggctgctgacctcacctactgggagagtgctgctcggatgattgctgatgt 142629 Query: 481 gtccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggc 540 |||||||| || ||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 142628 ctccaagtctgacaagatcgttgttgagaagtccactgtccctgtcaagaccgcagaggc 142569 Query: 541 cattgagaagatc 553 ||||||||||||| Sbjct: 142568 cattgagaagatc 142556
>dbj|AK103919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-A09, full insert sequence Length = 1774 Score = 432 bits (218), Expect = e-118 Identities = 379/433 (87%) Strand = Plus / Plus Query: 121 gtaagcagccaagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgac 180 |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 94 gtaagcaggaaagatggtgaagatctgctgcatcggagctggatatgtcggcggcccaac 153 Query: 181 aatggctgtcattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaa 240 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 154 catggctgtcattgccctcaaatgcccagcaattgaggtggtggttgttgacatctccaa 213 Query: 241 gccccgcattgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatga 300 ||| ||| |||| ||||||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 214 gcctcgcgttgatgcctggaacagcgaccagctcccaatctacgagcccggtcttgatga 273 Query: 301 tgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||||| |||| |||||||||| ||||||||||||||| || || || ||||||||||| Sbjct: 274 ggttgtgaaggaatgcaggggcaggaacctcttcttcagtacggacgtcgagaagcatgt 333 Query: 361 cgccgaggccgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctggg 420 ||| ||||| |||||||| || || || ||||||||||| |||||||||||||| || || Sbjct: 334 cgctgaggcagacatcatttttgtgtctgtcaacacccctaccaagacccgtggacttgg 393 Query: 421 agccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgt 480 ||| ||||||||||| |||||||||||||||||||| || || |||||||| || ||||| Sbjct: 394 agcaggcaaggctgctgacctcacctactgggagagtgctgctcggatgattgctgatgt 453 Query: 481 gtccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggc 540 |||||||| || ||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 454 ctccaagtctgacaagatcgttgttgagaagtccactgtccctgtcaagaccgcagaggc 513 Query: 541 cattgagaagatc 553 ||||||||||||| Sbjct: 514 cattgagaagatc 526
>dbj|AK099096.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023C02, full insert sequence Length = 1824 Score = 432 bits (218), Expect = e-118 Identities = 379/433 (87%) Strand = Plus / Plus Query: 121 gtaagcagccaagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgac 180 |||||||| |||||||||||||||||||||||||| ||||| || ||||||||||| || Sbjct: 223 gtaagcaggaaagatggtgaagatctgctgcatcggagctggatatgtcggcggcccaac 282 Query: 181 aatggctgtcattgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaa 240 ||||||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| Sbjct: 283 catggctgtcattgccctcaaatgcccagcaattgaggtggtggttgttgacatctccaa 342 Query: 241 gccccgcattgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatga 300 ||| ||| |||| ||||||||||||||| ||||| ||||||||||| || || ||||| Sbjct: 343 gcctcgcgttgatgcctggaacagcgaccagctcccaatctacgagcccggtcttgatga 402 Query: 301 tgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||||| |||| |||||||||| ||||||||||||||| || || || ||||||||||| Sbjct: 403 ggttgtgaaggaatgcaggggcaggaacctcttcttcagtacggacgtcgagaagcatgt 462 Query: 361 cgccgaggccgacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctggg 420 ||| ||||| |||||||| || || || ||||||||||| |||||||||||||| || || Sbjct: 463 cgctgaggcagacatcatttttgtgtctgtcaacacccctaccaagacccgtggacttgg 522 Query: 421 agccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgt 480 ||| ||||||||||| |||||||||||||||||||| || || |||||||| || ||||| Sbjct: 523 agcaggcaaggctgctgacctcacctactgggagagtgctgctcggatgattgctgatgt 582 Query: 481 gtccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggc 540 |||||||| || ||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct: 583 ctccaagtctgacaagatcgttgttgagaagtccactgtccctgtcaagaccgcagaggc 642 Query: 541 cattgagaagatc 553 ||||||||||||| Sbjct: 643 cattgagaagatc 655
>gb|BT017136.1| Zea mays clone EL01N0365H08.c mRNA sequence Length = 1682 Score = 406 bits (205), Expect = e-110 Identities = 295/324 (91%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 231 acatctccaagccccgcattgacgcctggaacagcg-acaccctcccgatctacgagcct 289 |||||||||||||||||||||| || |||||||||| || ||||||||||||||||||| Sbjct: 10 acatctccaagccccgcattgaggcatggaacagcgcactccctcccgatctacgagccc 69 Query: 290 ggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgtt 349 ||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||| Sbjct: 70 ggcctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttcagcactgatgtt 129 Query: 350 gagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaacacccccaccaagacc 409 |||||||| ||||| ||||| ||||||||||||||||| || |||||||||||||||||| Sbjct: 130 gagaagcacgtcgctgaggctgacatcatcttcgtctcggtgaacacccccaccaagacc 189 Query: 410 cgtggtctgggagccggcaaggctgccgacctcacctactgggagagcgccgcccggatg 469 ||||| || ||||| ||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 190 cgtgggcttggagctggcaaggctgccgacctcacctactgggagagcgctgctcgtatg 249 Query: 470 atcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaag 529 ||||||||||| |||||||| || ||||||| |||||||||||||||||||| |||||| Sbjct: 250 atcgccgatgtctccaagtctgacaagatcgttgtcgagaagtccaccgtccctgtcaag 309 Query: 530 accgcagaggccattgagaagatc 553 ||||| ||||| |||||||||||| Sbjct: 310 accgctgaggctattgagaagatc 333
>ref|XM_469834.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2058 Score = 396 bits (200), Expect = e-107 Identities = 367/423 (86%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || Sbjct: 205 aagatggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtg 264 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 265 atcgccctcaagtgcccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatc 324 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 ||||||||||||||||| || |||||||||||||| || ||||| || || |||||| Sbjct: 325 gacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaggtggtcaag 384 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | |||||||||| |||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 385 gagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcg 444 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||||||| ||||| ||||| || |||||||| || || || || ||||||||| Sbjct: 445 gacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaag 504 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||||||||||| Sbjct: 505 gcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtcc 564 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||||||||||||||||||||| || |||||||| || ||||| || |||||| Sbjct: 565 gacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaag 624 Query: 551 atc 553 ||| Sbjct: 625 atc 627
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 396 bits (200), Expect = e-107 Identities = 367/423 (86%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || Sbjct: 31012611 aagatggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtg 31012670 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 31012671 atcgccctcaagtgcccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatc 31012730 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 ||||||||||||||||| || |||||||||||||| || ||||| || || |||||| Sbjct: 31012731 gacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaggtggtcaag 31012790 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | |||||||||| |||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 31012791 gagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcg 31012850 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||||||| ||||| ||||| || |||||||| || || || || ||||||||| Sbjct: 31012851 gacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaag 31012910 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||||||||||| Sbjct: 31012911 gcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtcc 31012970 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||||||||||||||||||||| || |||||||| || ||||| || |||||| Sbjct: 31012971 gacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaag 31013030 Query: 551 atc 553 ||| Sbjct: 31013031 atc 31013033 Score = 325 bits (164), Expect = 9e-86 Identities = 358/423 (84%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct: 17586539 aagatggtgaagatctgctgcctcggagccggctatgtcggcggcccgaccatggcggtc 17586598 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| | | |||||||| ||||||||||||||| ||||||| Sbjct: 17586599 atcgccctcaagtgccccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatc 17586658 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 |||||||||||||||||| | ||||||||||||||||| |||||||| || || || Sbjct: 17586659 gacgcctggaacagcgacgcgctcccgatctacgagccgggcctcgacgacgtcgtgcgc 17586718 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 |||| | || | ||||||||||||||||| || || |||| ||| |||| ||||||| Sbjct: 17586719 cgctgccgcgggaggaacctcttcttcagcagcgacgtcgagaggcacgtcggcgaggcc 17586778 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||| ||||||||||||| ||||||||||||||| |||| || || || ||||||||| Sbjct: 17586779 gacatcgtcttcgtctccgtgaacacccccaccaaggcccgcggcctcggcgccggcaag 17586838 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||| | | ||| Sbjct: 17586839 gccgccgacctcacctactgggagagcgcggcgcggatgatcgccgccgtggcgacgtcc 17586898 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || || |||||||||||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 17586899 gacaaggtcgtcgtcgagaagtccaccgtgccggtcaagaccgcggaggccatcgagaag 17586958 Query: 551 atc 553 ||| Sbjct: 17586959 atc 17586961 Score = 272 bits (137), Expect = 1e-69 Identities = 349/420 (83%) Strand = Plus / Minus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||||||||||||||| || || ||||| ||||||||||| ||||| || || Sbjct: 22450946 atggtgaagatctgctgcatcggggcggggtacgtgggcggcccgacgatggcggtgatc 22450887 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || |||||||||| | | ||||||||||| || |||||||| ||| || || || Sbjct: 22450886 gcgctcaagtgccccgacgtggaggtggtggtggtggacatctcggcgccgcggatcgag 22450827 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 | ||||||||||| |||||| ||||||||||| ||||| || ||||| |||| | Sbjct: 22450826 gggtggaacagcgagcgcctccccatctacgagcccggcctggacgatgtcgtcaggcag 22450767 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | ||| ||||||||||||||||| || || ||| || |||||||| |||| | Sbjct: 22450766 tgccgcggccgcaacctcttcttcagcaccgacgtcgagcgccacgtcgccgacgccggc 22450707 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 ||| |||||||||||||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 22450706 atcgtcttcgtctccgtcaacacccccaccaagacccgcggcctcggcgccgggaaggcc 22450647 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 |||||||||||||||||||||||||||||||| || |||||||| || ||| || || Sbjct: 22450646 gccgacctcacctactgggagagcgccgcccgcatcatcgccgacgtctcccgctccgac 22450587 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 22450586 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgccgaggccatcgagaagatc 22450527 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 498 tcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 2609987 tcgtcgtcgagaagtccaccgtccccgtcaagacggccgaggccatagagaagatc 2609932 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccga 477 ||||||||||| ||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 2610063 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgccga 2610008 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gtgcgcgcccctcccctcct 86 |||||||||||||||||||| Sbjct: 7921245 gtgcgcgcccctcccctcct 7921264
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 396 bits (200), Expect = e-107 Identities = 367/423 (86%) Strand = Plus / Minus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || Sbjct: 83453 aagatggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtg 83394 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 83393 atcgccctcaagtgcccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatc 83334 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 ||||||||||||||||| || |||||||||||||| || ||||| || || |||||| Sbjct: 83333 gacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaggtggtcaag 83274 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | |||||||||| |||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 83273 gagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcg 83214 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||||||| ||||| ||||| || |||||||| || || || || ||||||||| Sbjct: 83213 gacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaag 83154 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||||||||||| Sbjct: 83153 gcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtcc 83094 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||||||||||||||||||||| || |||||||| || ||||| || |||||| Sbjct: 83093 gacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaag 83034 Query: 551 atc 553 ||| Sbjct: 83033 atc 83031
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 396 bits (200), Expect = e-107 Identities = 367/423 (86%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || Sbjct: 31103134 aagatggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtg 31103193 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 31103194 atcgccctcaagtgcccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatc 31103253 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 ||||||||||||||||| || |||||||||||||| || ||||| || || |||||| Sbjct: 31103254 gacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaggtggtcaag 31103313 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | |||||||||| |||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 31103314 gagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcg 31103373 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||||||| ||||| ||||| || |||||||| || || || || ||||||||| Sbjct: 31103374 gacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaag 31103433 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||||||||||| Sbjct: 31103434 gcggccgacctcacctactgggagagcgcggcgaggatgatcgccgacgtgtccaagtcc 31103493 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||||||||||||||||||||| || |||||||| || ||||| || |||||| Sbjct: 31103494 gacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaag 31103553 Query: 551 atc 553 ||| Sbjct: 31103554 atc 31103556 Score = 325 bits (164), Expect = 9e-86 Identities = 358/423 (84%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct: 17580080 aagatggtgaagatctgctgcctcggagccggctatgtcggcggcccgaccatggcggtc 17580139 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| | | |||||||| ||||||||||||||| ||||||| Sbjct: 17580140 atcgccctcaagtgccccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatc 17580199 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 |||||||||||||||||| | ||||||||||||||||| |||||||| || || || Sbjct: 17580200 gacgcctggaacagcgacgcgctcccgatctacgagccgggcctcgacgacgtcgtgcgc 17580259 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 |||| | || | ||||||||||||||||| || || |||| ||| |||| ||||||| Sbjct: 17580260 cgctgccgcgggaggaacctcttcttcagcagcgacgtcgagaggcacgtcggcgaggcc 17580319 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||| ||||||||||||| ||||||||||||||| |||| || || || ||||||||| Sbjct: 17580320 gacatcgtcttcgtctccgtgaacacccccaccaaggcccgcggcctcggcgccggcaag 17580379 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||| | | ||| Sbjct: 17580380 gccgccgacctcacctactgggagagcgcggcgcggatgatcgccgccgtggcgacgtcc 17580439 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || || |||||||||||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 17580440 gacaaggtcgtcgtcgagaagtccaccgtgccggtcaagaccgcggaggccatcgagaag 17580499 Query: 551 atc 553 ||| Sbjct: 17580500 atc 17580502 Score = 272 bits (137), Expect = 1e-69 Identities = 349/420 (83%) Strand = Plus / Minus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||||||||||||||| || || ||||| ||||||||||| ||||| || || Sbjct: 22443975 atggtgaagatctgctgcatcggggcggggtacgtgggcggcccgacgatggcggtgatc 22443916 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || |||||||||| | | ||||||||||| || |||||||| ||| || || || Sbjct: 22443915 gcgctcaagtgccccgacgtggaggtggtggtggtggacatctcggcgccgcggatcgag 22443856 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 | ||||||||||| |||||| ||||||||||| ||||| || ||||| |||| | Sbjct: 22443855 gggtggaacagcgagcgcctccccatctacgagcccggcctggacgatgtcgtcaggcag 22443796 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | ||| ||||||||||||||||| || || ||| || |||||||| |||| | Sbjct: 22443795 tgccgcggccgcaacctcttcttcagcaccgacgtcgagcgccacgtcgccgacgccggc 22443736 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 ||| |||||||||||||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 22443735 atcgtcttcgtctccgtcaacacccccaccaagacccgcggcctcggcgccgggaaggcc 22443676 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 |||||||||||||||||||||||||||||||| || |||||||| || ||| || || Sbjct: 22443675 gccgacctcacctactgggagagcgccgcccgcatcatcgccgacgtctcccgctccgac 22443616 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 22443615 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgccgaggccatcgagaagatc 22443556 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 498 tcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 2610097 tcgtcgtcgagaagtccaccgtccccgtcaagacggccgaggccatagagaagatc 2610042 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccga 477 ||||||||||| ||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 2610173 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgccga 2610118 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gtgcgcgcccctcccctcct 86 |||||||||||||||||||| Sbjct: 7919080 gtgcgcgcccctcccctcct 7919099
>gb|AY110924.1| Zea mays CL298_3 mRNA sequence Length = 679 Score = 394 bits (199), Expect = e-106 Identities = 345/396 (87%) Strand = Plus / Plus Query: 158 gctggctacgtcggcggcccgacaatggctgtcattgccatcaagtgcccagcaattgag 217 |||||||| ||||| ||||| || ||||| ||||||||| |||||||||||| |||||| Sbjct: 190 gctggctatgtcggtggcccaaccatggccgtcattgccctcaagtgcccagacattgag 249 Query: 218 gtggtggtcgtcgacatctccaagccccgcattgacgcctggaacagcgacaccctcccg 277 || || | ||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct: 250 gtcgtcgncgtcgacatctccaagccccgcattgaggcctggaacagtgacaccctgcca 309 Query: 278 atctacgagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttc 337 |||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||| Sbjct: 310 atctacgagcctggtctcgatgatgttgtgaagcagtgcaggggcaggaacctcttcttc 369 Query: 338 agcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaacacc 397 |||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || |||| Sbjct: 370 agcactgatgttgagaagcacgtcgctgaggctgacattatctttgtctcggtgaacann 429 Query: 398 cccaccaagacccgtggtctgggagccggcaaggctgccgacctcacctactgggagagc 457 |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct: 430 nnnaccaagacccgtgggcttggagctggcaaggctgccgacctcacctactgggagagc 489 Query: 458 gccgcccggatgatcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtccacc 517 || ||||| ||||| || ||||| |||||||| || |||| || || ||||||||||| Sbjct: 490 gctgcccgcatgattgcggatgtctccaagtctgacaagattgttgttgagaagtccact 549 Query: 518 gtccccgtcaagaccgcagaggccattgagaagatc 553 ||||| ||||||||||| ||||| |||||||||||| Sbjct: 550 gtccctgtcaagaccgctgaggctattgagaagatc 585
>dbj|AK098880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001F12, full insert sequence Length = 1946 Score = 389 bits (196), Expect = e-105 Identities = 366/423 (86%) Strand = Plus / Plus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 |||||||||||||||||||||||||| ||||| ||||| ||||| ||||| ||||| || Sbjct: 110 aagatggtgaagatctgctgcatcggagctgggtacgtgggcgggccgaccatggcggtg 169 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| || || ||||||||||||||||||||||||||||| ||||| Sbjct: 170 atcgccctcaagtgcccggcgatcgaggtggtggtcgtcgacatctccaagccgcgcatc 229 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 ||||||||||||||||| || |||||||||||||| || ||||| || || |||||| Sbjct: 230 gacgcctggaacagcgagcagctgccgatctacgagccggggctcgacgaggtggtcaag 289 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 | |||||||||| |||||||||||||||||| || || |||||||| ||||| ||||| Sbjct: 290 gagtgcaggggcaggaacctcttcttcagcacggacgtcgagaagcacgtcgcggaggcg 349 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||||||||||| ||||| ||||| || |||||||| || || || || ||||||||| Sbjct: 350 gacatcatcttcgtgtccgtgaacacgccgaccaagacgcgcggcctcggcgccggcaag 409 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || |||||||| |||| ||||||||||| Sbjct: 410 gcggccgacctcacctactgggagagcgcggcgaggatgatctccgacgtgtccaagtcc 469 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || ||||||||||||||||||||||||| || |||||||| || ||||| || |||||| Sbjct: 470 gacaagatcgtcgtcgagaagtccaccgtgccggtcaagacggccgaggcgatcgagaag 529 Query: 551 atc 553 ||| Sbjct: 530 atc 532
>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence, complete sequence Length = 97152 Score = 325 bits (164), Expect = 9e-86 Identities = 358/423 (84%) Strand = Plus / Minus Query: 131 aagatggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtc 190 ||||||||||||||||||||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct: 68538 aagatggtgaagatctgctgcctcggagccggctatgtcggcggcccgaccatggcggtc 68479 Query: 191 attgccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcatt 250 || ||| |||||||||| | | |||||||| ||||||||||||||| ||||||| Sbjct: 68478 atcgccctcaagtgccccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatc 68419 Query: 251 gacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaag 310 |||||||||||||||||| | ||||||||||||||||| |||||||| || || || Sbjct: 68418 gacgcctggaacagcgacgcgctcccgatctacgagccgggcctcgacgacgtcgtgcgc 68359 Query: 311 gcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggcc 370 |||| | || | ||||||||||||||||| || || |||| ||| |||| ||||||| Sbjct: 68358 cgctgccgcgggaggaacctcttcttcagcagcgacgtcgagaggcacgtcggcgaggcc 68299 Query: 371 gacatcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaag 430 |||||| ||||||||||||| ||||||||||||||| |||| || || || ||||||||| Sbjct: 68298 gacatcgtcttcgtctccgtgaacacccccaccaaggcccgcggcctcggcgccggcaag 68239 Query: 431 gctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcg 490 || |||||||||||||||||||||||||| || ||||||||||||| ||| | | ||| Sbjct: 68238 gccgccgacctcacctactgggagagcgcggcgcggatgatcgccgccgtggcgacgtcc 68179 Query: 491 gancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaag 550 || || |||||||||||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 68178 gacaaggtcgtcgtcgagaagtccaccgtgccggtcaagaccgcggaggccatcgagaag 68119 Query: 551 atc 553 ||| Sbjct: 68118 atc 68116
>ref|XM_468764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1446 Score = 319 bits (161), Expect = 5e-84 Identities = 355/420 (84%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 |||||||||||||||||| |||| || ||||| |||||||||||||| ||||| ||||| Sbjct: 1 atggtgaagatctgctgcctcggagccggctatgtcggcggcccgaccatggcggtcatc 60 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 ||| |||||||||| | | |||||||| ||||||||||||||| ||||||| ||| Sbjct: 61 gccctcaagtgccccgacgtcgaggtggtcgtcgtcgacatctccgccgcccgcatcgac 120 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||||||| | ||||||||||||||||| |||||||| || || || | Sbjct: 121 gcctggaacagcgacgcgctcccgatctacgagccgggcctcgacgacgtcgtgcgccgc 180 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | || | ||||||||||||||||| || || |||| ||| |||| |||||||||| Sbjct: 181 tgccgcgggaggaacctcttcttcagcagcgacgtcgagaggcacgtcggcgaggccgac 240 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 ||| ||||||||||||| ||||||||||||||| |||| || || || ||||||||||| Sbjct: 241 atcgtcttcgtctccgtgaacacccccaccaaggcccgcggcctcggcgccggcaaggcc 300 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 |||||||||||||||||||||||||| || ||||||||||||| ||| | | ||| || Sbjct: 301 gccgacctcacctactgggagagcgcggcgcggatgatcgccgccgtggcgacgtccgac 360 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 || |||||||||||||||||||||| || ||||||||||| |||||||| ||||||||| Sbjct: 361 aaggtcgtcgtcgagaagtccaccgtgccggtcaagaccgcggaggccatcgagaagatc 420
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 272 bits (137), Expect = 1e-69 Identities = 349/420 (83%) Strand = Plus / Minus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||||||||||||||| || || ||||| ||||||||||| ||||| || || Sbjct: 46193 atggtgaagatctgctgcatcggggcggggtacgtgggcggcccgacgatggcggtgatc 46134 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || |||||||||| | | ||||||||||| || |||||||| ||| || || || Sbjct: 46133 gcgctcaagtgccccgacgtggaggtggtggtggtggacatctcggcgccgcggatcgag 46074 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 | ||||||||||| |||||| ||||||||||| ||||| || ||||| |||| | Sbjct: 46073 gggtggaacagcgagcgcctccccatctacgagcccggcctggacgatgtcgtcaggcag 46014 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | ||| ||||||||||||||||| || || ||| || |||||||| |||| | Sbjct: 46013 tgccgcggccgcaacctcttcttcagcaccgacgtcgagcgccacgtcgccgacgccggc 45954 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 ||| |||||||||||||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 45953 atcgtcttcgtctccgtcaacacccccaccaagacccgcggcctcggcgccgggaaggcc 45894 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 |||||||||||||||||||||||||||||||| || |||||||| || ||| || || Sbjct: 45893 gccgacctcacctactgggagagcgccgcccgcatcatcgccgacgtctcccgctccgac 45834 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 45833 aagatcgtcgtcgagaagtccaccgtccccgtcaagaccgccgaggccatcgagaagatc 45774
>ref|XM_568166.1| Cryptococcus neoformans var. neoformans JEC21 UDP-glucose 6-dehydrogenase (CNL06460) partial mRNA Length = 1646 Score = 167 bits (84), Expect = 5e-38 Identities = 141/160 (88%) Strand = Plus / Plus Query: 248 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtc 307 ||||||||||||||| |||| |||||| |||||||||||||| |||||||| |||||| Sbjct: 184 attgacgcctggaactctgacaacctccctatctacgagcctggtctcgatgaggttgtc 243 Query: 308 aaggcctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgag 367 |||||| |||||||||||||||||||||||||||||||||||| ||| | ||| || Sbjct: 244 aaggccaccaggggcaagaacctcttcttcagcactgatgttgacaagggtatcgaggac 303 Query: 368 gccgacatcatcttcgtctccgtcaacacccccaccaaga 407 |||||| ||||||| || |||||||||||||||||||||| Sbjct: 304 gccgacctcatctttgtttccgtcaacacccccaccaaga 343 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 497 atcgtcgtcgagaagtccaccgt 519 ||||||||||||||||||||||| Sbjct: 433 atcgtcgtcgagaagtccaccgt 455 Score = 40.1 bits (20), Expect = 7.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggctacgtcggcgg 174 |||||||||||| ||||| ||||| || |||||||| Sbjct: 75 gaagatctgctgtatcggcgctggttatgtcggcgg 110
>gb|AY222335.1| Colocasia esculenta UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 165 bits (83), Expect = 2e-37 Identities = 223/270 (82%) Strand = Plus / Plus Query: 284 gagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcact 343 ||||||||||| ||||| || || ||| ||||| |||| |||||||||||||||||| Sbjct: 151 gagcctggccttgatgaggtggtgaagcagtgcagaggcaggaacctcttcttcagcacc 210 Query: 344 gatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaacacccccacc 403 || | |||||||||||| | || || ||||||||||| || ||||| ||||| || || Sbjct: 211 gacatagagaagcatgtctctgaagctgacatcatctttgtttccgtaaacacacctact 270 Query: 404 aagacccgtggtctgggagccggcaaggctgccgacctcacctactgggagagcgccgcc 463 |||||||||||||| || || ||||||||||| ||||||||||||||||||||||| ||| Sbjct: 271 aagacccgtggtcttggtgctggcaaggctgctgacctcacctactgggagagcgcagcc 330 Query: 464 cggatgatcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtccaccgtcccc 523 || ||||| || ||||| || ||||| || |||| || || ||||| || || ||||| Sbjct: 331 cgtatgattgctgatgtctcaaagtccgacaagattgtggttgagaaatctacagtccct 390 Query: 524 gtcaagaccgcagaggccattgagaagatc 553 |||||||| || ||||| || ||||||||| Sbjct: 391 gtcaagactgccgaggctatcgagaagatc 420 Score = 63.9 bits (32), Expect = 5e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| ||||| ||||| |||||||| ||||| || || || |||||||| || Sbjct: 1 atggtgaagatttgctgtatcggagctggctatgtcggggggccaactatggctgtgatc 60 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctc 237 || ||||||||||||| ||||| || || || || |||||||| Sbjct: 61 gcactcaagtgcccagccattgaagttgtcgttgtggacatctc 104
>gb|AC119411.16| Medicago truncatula clone mth2-23c14, complete sequence Length = 106790 Score = 161 bits (81), Expect = 3e-36 Identities = 332/416 (79%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| |||||||| ||||| || || ||||| || || |||||||| |||||| Sbjct: 71914 atggtgaagatttgctgcattggtgccggatatgtcggtggtccaacaatggcagtcatt 71973 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || | ||||| ||| | ||||| |||| || || ||||| || || |||||||||| Sbjct: 71974 gcacttaagtgtccatccattgaagtggctgttgttgacatatctaaaccccgcattgca 72033 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||| |||||||| || ||||| || |||||||| || |||||||| ||| Sbjct: 72034 gcctggaacagtgacacccttccaatctatgaacctggccttgacgatgttgtaaagcaa 72093 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | ||||||||||||||||||||||| |||||||| ||||||||| ||||||||| Sbjct: 72094 tgccgtggcaagaacctcttcttcagcacagatgttgaaaagcatgtctttgaggccgac 72153 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 || | || ||||| || |||||||| || || || | ||||| || |||||||| || Sbjct: 72154 atagtgtttgtctctgtgaacaccccgactaaaactcagggtctcggtgccggcaaagca 72213 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 || || | || || ||||||||||| || || ||||| |||||||| || ||||| || Sbjct: 72214 gcagatttgacgtattgggagagcgcagctcgtatgattgccgatgtctcaaagtctgac 72273 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaa 549 | ||||| |||||||| || || ||||| ||||| || || ||||| |||||||| Sbjct: 72274 aaaatcgttgtcgagaaatcaactgtccctgtcaaaactgctgaggcaattgagaa 72329
>gb|AF405548.1| Cryptococcus neoformans var. neoformans UDP-glucose dehydrogenase Ugd1p (UGD1) gene, complete cds Length = 2377 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 248 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtc 307 ||||||||||||||| |||| |||||| |||||||||||||| |||||||| |||||| Sbjct: 595 attgacgcctggaactctgacaacctccctatctacgagcctggtctcgatgaggttgtc 654 Query: 308 aaggcctgcaggggcaagaacctcttcttcagcactgatgttga 351 |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 655 aaggccaccaggggcaagaacctcttcttcagcactgatgttga 698 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 375 tcatcttcgtctccgtcaacacccccaccaaga 407 ||||||| || |||||||||||||||||||||| Sbjct: 771 tcatctttgtttccgtcaacacccccaccaaga 803 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 497 atcgtcgtcgagaagtccaccgt 519 ||||||||||||||||||||||| Sbjct: 943 atcgtcgtcgagaagtccaccgt 965
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete sequence Length = 906719 Score = 135 bits (68), Expect = 2e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 248 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtc 307 ||||||||||||||| |||| |||||| |||||||||||||| |||||||| |||||| Sbjct: 795796 attgacgcctggaactctgacaacctccctatctacgagcctggtctcgatgaggttgtc 795855 Query: 308 aaggcctgcaggggcaagaacctcttcttcagcactgatgttga 351 |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 795856 aaggccaccaggggcaagaacctcttcttcagcactgatgttga 795899 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 375 tcatcttcgtctccgtcaacacccccaccaaga 407 ||||||| || |||||||||||||||||||||| Sbjct: 795972 tcatctttgtttccgtcaacacccccaccaaga 796004 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 497 atcgtcgtcgagaagtccaccgt 519 ||||||||||||||||||||||| Sbjct: 796144 atcgtcgtcgagaagtccaccgt 796166
>gb|U53418.1|GMU53418 Glycine max UDP-glucose dehydrogenase mRNA, complete cds Length = 1714 Score = 135 bits (68), Expect = 2e-28 Identities = 331/419 (78%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| |||||||| |||||||| || || || || || || ||||| |||||| Sbjct: 13 atggtgaagatttgctgcattggtgctggatatgtggggggtcctactatggcagtcatt 72 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || | ||||||||| | ||||| || | || || || ||||| || ||||||||| Sbjct: 73 gcacttaagtgcccatccattgaagtcgctgttgttgatatctctaaatcccgcattgca 132 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||||||| || || ||||| || |||||||| |||| |||||| ||| Sbjct: 133 gcctggaacagcgaccagcttcctatctatgaacctggccttgatggtgttgtgaagcaa 192 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | |||||||||||||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 193 tgccgtggcaagaacctcttcttcagcactgatgttgaaaagcatgtctttgaggctgac 252 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 || | || ||||| ||||||||||| ||||| || | ||||| ||||| ||||| || Sbjct: 253 atagtgtttgtctctgtcaacaccccaaccaaaactcagggtcttggagctggcaaagca 312 Query: 434 gccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggan 493 || || | || || |||||||| || || || ||||| || ||||| || ||||| || Sbjct: 313 gcagatttgacatattgggagagtgcagctcgcatgattgctgatgtctcgaagtctgac 372 Query: 494 cagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagat 552 ||||||| || ||||| ||||| ||||| ||||| || || || ||||| |||||||| Sbjct: 373 aagatcgtggtggagaaatccacagtccctgtcaaaactgctgaagccatagagaagat 431
>gb|AY530214.1| Cryptococcus neoformans var. grubii UDP-glucose dehydrogenase gene, complete cds Length = 4991 Score = 119 bits (60), Expect = 1e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 248 attgacgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtc 307 ||||||||||||||| |||| |||||| ||||| || ||||| |||||||| |||||| Sbjct: 1548 attgacgcctggaactctgacaacctccctatctatgaacctggtctcgatgaggttgtc 1607 Query: 308 aaggcctgcaggggcaagaacctcttcttcagcactgatgttga 351 |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1608 aaggccaccaggggcaagaacctcttcttcagcactgatgttga 1651 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 495 agatcgtcgtcgagaagtccaccgtcccc 523 |||||||||| || ||||||||||||||| Sbjct: 1893 agatcgtcgttgaaaagtccaccgtcccc 1921
>gb|AY466400.1| Populus tomentosa UDP-glucose dehydrogenase (ugdh) mRNA, complete cds Length = 1819 Score = 115 bits (58), Expect = 2e-22 Identities = 259/326 (79%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 |||||||||||||| ||||| || || || || |||||||| || |||||||||||||| Sbjct: 78 atggtgaagatctgttgcattggagcagggtatgtcggcgggcctacaatggctgtcatc 137 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || |||||||||| ||||||| |||||||| || ||||||| | || | |||| Sbjct: 138 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 197 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| || |||| Sbjct: 198 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 257 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | |||| ||| ||||||||||||| || || |||||||||||||| ||||| || Sbjct: 258 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 317 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 || | || || || ||||||||||| ||||| || | ||||| ||||| ||||| ||| Sbjct: 318 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 377 Query: 434 gccgacctcacctactgggagagcgc 459 || || || || |||||||||||||| Sbjct: 378 gcagatctgacgtactgggagagcgc 403
>gb|AF053973.1| Populus tremula x Populus tremuloides UDP-glucose dehydrogenase gene (ugdh), complete cds Length = 1824 Score = 107 bits (54), Expect = 4e-20 Identities = 258/326 (79%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 |||||||||||||| ||||| || || || || ||||| || || |||||||||||||| Sbjct: 78 atggtgaagatctgttgcattggagcagggtatgtcggtgggcctacaatggctgtcatc 137 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcgacatctccaagccccgcattgac 253 || |||||||||| ||||||| |||||||| || ||||||| | || | |||| Sbjct: 138 gcactcaagtgcccgtcaattgaagtggtggttgttgacatctgggaacctaggattgca 197 Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||| ||| ||||| ||||| ||||| ||||| ||||||| || |||| Sbjct: 198 gcctggaacagtgaccagctccccatctatgagccaggcctgtatgatgtggtgaaggag 257 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgac 373 ||| | |||| ||| ||||||||||||| || || |||||||||||||| ||||| || Sbjct: 258 tgccgaggcaggaatctcttcttcagcaaagacgtggagaagcatgtcgctgaggctgat 317 Query: 374 atcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggct 433 || | || || || ||||||||||| ||||| || | ||||| ||||| ||||| ||| Sbjct: 318 atagtttttgtttcggtcaacacccctaccaaaactcaaggtcttggagctggcaaagct 377 Query: 434 gccgacctcacctactgggagagcgc 459 || || || || |||||||||||||| Sbjct: 378 gcagatctgacgtactgggagagcgc 403
>ref|NM_121553.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT5G15490 mRNA, complete cds Length = 1778 Score = 101 bits (51), Expect = 2e-18 Identities = 221/278 (79%) Strand = Plus / Plus Query: 275 ccgatctacgagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttc 334 |||||||| |||||||| || |||||||| || ||| ||| | || ||||| |||||| Sbjct: 244 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 303 Query: 335 ttcagcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaac 394 |||||||| ||||||||||| ||||| ||||| ||||| | || || || |||||| Sbjct: 304 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 363 Query: 395 acccccaccaagacccgtggtctgggagccggcaaggctgccgacctcacctactgggag 454 ||||| || |||||||||||||| ||||| ||||| ||||| || | || ||||||||| Sbjct: 364 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 423 Query: 455 agcgccgcccggatgatcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtcc 514 ||||| || || ||||| |||||||| || || || |||| || || ||||| || Sbjct: 424 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 483 Query: 515 accgtccccgtcaagaccgcagaggccattgagaagat 552 || || || ||||| ||||||||||| ||||||||||| Sbjct: 484 actgttcctgtcaaaaccgcagaggcaattgagaagat 521 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| |||||||| || ||||| || || || || || || |||||||||||| Sbjct: 103 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 162 Query: 194 gc 195 || Sbjct: 163 gc 164
>gb|AY056200.1| Arabidopsis thaliana putative UDP-glucose dehydrogenase (At5g15490) mRNA, complete cds Length = 1793 Score = 101 bits (51), Expect = 2e-18 Identities = 221/278 (79%) Strand = Plus / Plus Query: 275 ccgatctacgagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttc 334 |||||||| |||||||| || |||||||| || ||| ||| | || ||||| |||||| Sbjct: 244 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 303 Query: 335 ttcagcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaac 394 |||||||| ||||||||||| ||||| ||||| ||||| | || || || |||||| Sbjct: 304 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 363 Query: 395 acccccaccaagacccgtggtctgggagccggcaaggctgccgacctcacctactgggag 454 ||||| || |||||||||||||| ||||| ||||| ||||| || | || ||||||||| Sbjct: 364 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 423 Query: 455 agcgccgcccggatgatcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtcc 514 ||||| || || ||||| |||||||| || || || |||| || || ||||| || Sbjct: 424 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 483 Query: 515 accgtccccgtcaagaccgcagaggccattgagaagat 552 || || || ||||| ||||||||||| ||||||||||| Sbjct: 484 actgttcctgtcaaaaccgcagaggcaattgagaagat 521 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| |||||||| || ||||| || || || || || || |||||||||||| Sbjct: 103 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 162 Query: 194 gc 195 || Sbjct: 163 gc 164
>emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, BAC clone T20K14 (ESSA project) Length = 90176 Score = 101 bits (51), Expect = 2e-18 Identities = 221/278 (79%) Strand = Plus / Minus Query: 275 ccgatctacgagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttc 334 |||||||| |||||||| || |||||||| || ||| ||| | || ||||| |||||| Sbjct: 34951 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 34892 Query: 335 ttcagcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaac 394 |||||||| ||||||||||| ||||| ||||| ||||| | || || || |||||| Sbjct: 34891 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 34832 Query: 395 acccccaccaagacccgtggtctgggagccggcaaggctgccgacctcacctactgggag 454 ||||| || |||||||||||||| ||||| ||||| ||||| || | || ||||||||| Sbjct: 34831 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 34772 Query: 455 agcgccgcccggatgatcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtcc 514 ||||| || || ||||| |||||||| || || || |||| || || ||||| || Sbjct: 34771 agcgctgctcgtatgattgccgatgtttcggtttccgacaagattgttgttgagaaatca 34712 Query: 515 accgtccccgtcaagaccgcagaggccattgagaagat 552 || || || ||||| ||||||||||| ||||||||||| Sbjct: 34711 actgttcctgtcaaaaccgcagaggcaattgagaagat 34674 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| |||||||| || ||||| || || || || || || |||||||||||| Sbjct: 35092 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 35033 Query: 194 gc 195 || Sbjct: 35032 gc 35031
>gb|BT015794.1| Arabidopsis thaliana At5g15490 mRNA, complete cds Length = 1443 Score = 93.7 bits (47), Expect = 6e-16 Identities = 220/278 (79%) Strand = Plus / Plus Query: 275 ccgatctacgagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttc 334 |||||||| |||||||| || |||||||| || ||| ||| | || ||||| |||||| Sbjct: 142 ccgatctatgagcctggtcttgatgatgtcgttaagcagtgccgtggaaagaatctcttc 201 Query: 335 ttcagcactgatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaac 394 |||||||| ||||||||||| ||||| ||||| ||||| | || || || |||||| Sbjct: 202 ttcagcaccgatgttgagaaacatgtgagagaggctgacattgtttttgtgtctgtcaac 261 Query: 395 acccccaccaagacccgtggtctgggagccggcaaggctgccgacctcacctactgggag 454 ||||| || |||||||||||||| ||||| ||||| ||||| || | || ||||||||| Sbjct: 262 acccctactaagacccgtggtcttggagctggcaaagctgcggatttgacttactgggag 321 Query: 455 agcgccgcccggatgatcgccgatgtgtccaagtcggancagatcgtcgtcgagaagtcc 514 ||||| || || ||||| ||||| || || || || |||| || || ||||| || Sbjct: 322 agcgctgctcgtatgattgccgacgtttcggtttccgacaagattgttgttgagaaatca 381 Query: 515 accgtccccgtcaagaccgcagaggccattgagaagat 552 || || || ||||| ||||||||||| ||||||||||| Sbjct: 382 actgttcctgtcaaaaccgcagaggcaattgagaagat 419 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| |||||||| || ||||| || || || || || || |||||||||||| Sbjct: 1 atggtgaagatttgctgcattggagctggatatgttggtggtccaaccatggctgtcatt 60 Query: 194 gc 195 || Sbjct: 61 gc 62
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 141/173 (81%) Strand = Plus / Plus Query: 284 gagcctggcctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcact 343 |||||||| || |||||||| || ||| ||||| || |||||||| |||||||||||| Sbjct: 69539 gagcctggtcttgatgatgtggtgaagaagtgcagaggaaagaaccttttcttcagcact 69598 Query: 344 gatgttgagaagcatgtcgccgaggccgacatcatcttcgtctccgtcaacacccccacc 403 ||||||||||| ||||| |||||||| ||||| | || || || || ||||| || ||| Sbjct: 69599 gatgttgagaaacatgttgccgaggctaacatcgtgtttgtttcggtgaacactccgacc 69658 Query: 404 aagacccgtggtctgggagccggcaaggctgccgacctcacctactgggagag 456 ||||| | ||||| ||||| ||||| || || || ||||| ||||||||||| Sbjct: 69659 aagactcagggtcttggagctggcaaagcagctgatctcacttactgggagag 69711 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| || ||||| || |||||||| || || || || ||||||||||| ||| Sbjct: 69389 atggtgaagatttgttgcattggagctggctatgttggtggtccaacaatggctgtgatt 69448 Query: 194 gc 195 || Sbjct: 69449 gc 69450
>ref|XM_470220.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 7266 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 498 tcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 4712 tcgtcgtcgagaagtccaccgtccccgtcaagacggccgaggccatagagaagatc 4767 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccga 477 ||||||||||| ||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 4636 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgccga 4691
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 498 tcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||||||||||||||| || |||||||| ||||||||| Sbjct: 60107 tcgtcgtcgagaagtccaccgtccccgtcaagacggccgaggccatagagaagatc 60162 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccga 477 ||||||||||| ||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 60031 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgccga 60086
>gb|AY619949.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 2 mRNA, complete cds Length = 1768 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||||||| ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 200 gcctggaacagcgaccagctccccatctatgagccaggcctcgaggatgtagtcaaggaa 259 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | |||| |||||||||||||||||| ||||| ||||| ||||| Sbjct: 260 tgccgaggcaggaacctcttcttcagcacagatgtcgagaaacatgt 306 Score = 44.1 bits (22), Expect = 0.48 Identities = 61/74 (82%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| ||||| || |||||||| || || || || || || ||||||||||| Sbjct: 80 atggtgaagatttgctgtataggtgctggatatgttggggggcccaccatggctgtcata 139 Query: 194 gccatcaagtgccc 207 || |||||||||| Sbjct: 140 gcactcaagtgccc 153
>ref|NM_001035715.1| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.2 mRNA, complete cds Length = 1790 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 252 acgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaagg 311 |||| |||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||| Sbjct: 182 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 241 Query: 312 cctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 242 aatgccgtggcaagaaccttttctttagtactgatgttgagaaacatgt 290
>ref|NM_113861.2| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT3G29360 transcript variant AT3G29360.1 mRNA, complete cds Length = 1793 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 252 acgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaagg 311 |||| |||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||| Sbjct: 185 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 244 Query: 312 cctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 245 aatgccgtggcaagaaccttttctttagtactgatgttgagaaacatgt 293
>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01, complete sequence Length = 186325 Score = 81.8 bits (41), Expect = 2e-12 Identities = 110/132 (83%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtg 481 ||||||||||| ||||||||| |||||||||||||||| || ||||||||| ||| | | Sbjct: 37430 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgtcgacgcg 37489 Query: 482 tccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggcc 541 || || | || |||||||||||||||||||||| ||||||| ||| || |||||| Sbjct: 37490 tcacgctccggcaaggtcgtcgtcgagaagtccaccgt-cccgtcaggacggccgaggcc 37548 Query: 542 attgagaagatc 553 || ||||||||| Sbjct: 37549 atcgagaagatc 37560
>gb|AF424576.1|AF424576 Arabidopsis thaliana AT3g29360/MUO10_6 mRNA, complete cds Length = 1793 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 252 acgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaagg 311 |||| |||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||| Sbjct: 185 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 244 Query: 312 cctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 245 aatgccgtggcaagaaccttttctttagtactgatgttgagaaacatgt 293
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 110/132 (83%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtg 481 ||||||||||| ||||||||| |||||||||||||||| || ||||||||| ||| | | Sbjct: 29364414 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgtcgacgcg 29364473 Query: 482 tccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggcc 541 || || | || |||||||||||||||||||||| ||||||| ||| || |||||| Sbjct: 29364474 tcacgctccggcaaggtcgtcgtcgagaagtccaccgt-cccgtcaggacggccgaggcc 29364532 Query: 542 attgagaagatc 553 || ||||||||| Sbjct: 29364533 atcgagaagatc 29364544
>gb|AY088902.1| Arabidopsis thaliana clone 9930 mRNA, complete sequence Length = 1746 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 252 acgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaagg 311 |||| |||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||| Sbjct: 185 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 244 Query: 312 cctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 245 aatgccgtggcaagaaccttttctttagtactgatgttgagaaacatgt 293
>gb|AY619948.1| Nicotiana tabacum putative UDP-glucose dehydrogenase 1 mRNA, complete cds Length = 1823 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||||||| ||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 209 gcctggaacagcgaccagctccccatctatgagccaggcctcgaggatgtagtcaaggaa 268 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaa 354 ||| | |||| |||||||||||||||||| ||||| ||||| Sbjct: 269 tgccgaggcaggaacctcttcttcagcacagatgtcgagaa 309 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| ||||| || |||||||| || || || ||||| || ||||||||||| Sbjct: 89 atggtgaagatttgctgtataggtgctggatatgttgggggccccaccatggctgtcata 148 Query: 194 gccatcaagtgccc 207 || |||||||||| Sbjct: 149 gcactcaagtgccc 162
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 252 acgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaagg 311 |||| |||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||| Sbjct: 18340 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 18281 Query: 312 cctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 18280 aatgccgtggcaagaaccttttctttagtactgatgttgagaaacatgt 18232
>dbj|AK101692.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059L02, full insert sequence Length = 1603 Score = 81.8 bits (41), Expect = 2e-12 Identities = 110/132 (83%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 422 gccggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtg 481 ||||||||||| ||||||||| |||||||||||||||| || ||||||||| ||| | | Sbjct: 103 gccggcaaggccgccgacctcgcctactgggagagcgcggcgaggatgatcgtcgacgcg 162 Query: 482 tccaagtcggancagatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggcc 541 || || | || |||||||||||||||||||||| ||||||| ||| || |||||| Sbjct: 163 tcacgctccggcaaggtcgtcgtcgagaagtccaccgt-cccgtcaggacggccgaggcc 221 Query: 542 attgagaagatc 553 || ||||||||| Sbjct: 222 atcgagaagatc 233
>gb|BT021126.1| Arabidopsis thaliana At3g29360 gene, complete cds Length = 1486 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 252 acgcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaagg 311 |||| |||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||| Sbjct: 132 acgcttggaacagtgacacgcttccgatttacgagcctggtcttgatgatgttgtgaagc 191 Query: 312 cctgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | ||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 192 aatgccgtggcaagaaccttttctttagtactgatgttgagaaacatgt 240
>gb|AY496079.1| Cinnamomum osmophloeum UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 1443 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 134 atggtgaagatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgtcatt 193 ||||||||||| ||||||||||| ||||| || || || |||||||| |||||||||||| Sbjct: 1 atggtgaagatatgctgcatcggagctggatatgttggtggcccgaccatggctgtcatt 60 Query: 194 gccatcaagtgcccagcaattgaggtggtggtcgtcga 231 || |||| ||||| ||||||| || || |||||||| Sbjct: 61 gcactcaaatgcccttcaattgaagtcgtcgtcgtcga 98 Score = 58.0 bits (29), Expect = 3e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 446 tactgggagagcgccgcccggatgatcgccgatgtgtccaagtcggancagatcgtcgtc 505 ||||||||||| || || |||||||| || ||||| |||||||| || |||| || || Sbjct: 313 tactgggagagtgctgctcggatgattgctgatgtatccaagtctgataagattgtggtt 372 Query: 506 gagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 ||||| || |||||||| || ||||| || ||||| ||||| |||||| Sbjct: 373 gagaaatcaaccgtcccggtgaagacagctgaggcaattgaaaagatc 420
>gb|BT013548.1| Lycopersicon esculentum clone 132272F, mRNA sequence Length = 1845 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 254 gcctggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcc 313 ||||||||||| || || ||||| || || ||||| |||||| ||||| | ||||||| Sbjct: 304 gcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggag 363 Query: 314 tgcaggggcaagaacctcttcttcagcactgatgttgagaagcatgt 360 ||| | |||| |||||||||||||||||| ||||| ||||| ||||| Sbjct: 364 tgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgt 410
>ref|XM_473644.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 63.9 bits (32), Expect = 5e-07 Identities = 51/56 (91%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 498 tcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccattgagaagatc 553 |||||||||||||||||||||| ||||||| ||| || |||||||| ||||||||| Sbjct: 32 tcgtcgtcgagaagtccaccgt-cccgtcaggacggccgaggccatcgagaagatc 86
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 63.9 bits (32), Expect = 5e-07 Identities = 176/224 (78%) Strand = Plus / Plus Query: 257 tggaacagcgacaccctcccgatctacgagcctggcctcgatgatgttgtcaaggcctgc 316 |||||||||||| ||| |||||||||||||| || || || | || || |||| ||| Sbjct: 141069 tggaacagcgaccacctaccgatctacgagccaggtcttgaagccgtggtgaaggagtgc 141128 Query: 317 aggggcaagaacctcttcttcagcactgatgttgagaagcatgtcgccgaggccgacatc 376 ||||| | |||||| |||||||||||||| || ||||| ||||| || || || || || Sbjct: 141129 aggggaaggaaccttttcttcagcactgaagtggagaaacatgttgcagaagctgatata 141188 Query: 377 atcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccggcaaggctgcc 436 |||| || || || ||||| || || || || | |||||| ||||||||||| || || Sbjct: 141189 gtctttgtatctgtgaacacaccaacaaaaactcatggtcttggagccggcaaagcggct 141248 Query: 437 gacctcacctactgggagagcgccgcccggatgatcgccgatgt 480 || | || ||||||||||| |||| |||||||| |||||||| Sbjct: 141249 gatttaacatactgggagagttccgctcggatgattgccgatgt 141292
>ref|XM_428078.1| PREDICTED: Gallus gallus similar to UDP-glucose 6-dehydrogenase (LOC430523), partial mRNA Length = 555 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggctacgtcggcgg 174 |||||||||||| |||||||||||||| |||||||| Sbjct: 408 gaagatctgctgtatcggtgctggctatgtcggcgg 443
>ref|XM_954225.1| Neurospora crassa OR74A hypothetical protein (NCU08228.1) partial mRNA Length = 1998 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 375 tcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccgg 426 |||||||| ||| ||| ||||| |||||||||||| ||||||||||||||| Sbjct: 620 tcatcttcatctgcgttaacacacccaccaagacctatggtctgggagccgg 671
>ref|XM_328933.1| Neurospora crassa OR74A hypothetical protein (NCU08228.1) partial mRNA Length = 1998 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 375 tcatcttcgtctccgtcaacacccccaccaagacccgtggtctgggagccgg 426 |||||||| ||| ||| ||||| |||||||||||| ||||||||||||||| Sbjct: 620 tcatcttcatctgcgttaacacacccaccaagacctatggtctgggagccgg 671
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 142 gatctgctgcatcggtgctggctacgtcggcggcccgacaatggctgt 189 ||||||||||||||| || ||||| || ||||||||||| |||||||| Sbjct: 203891 gatctgctgcatcggcgccggctatgtgggcggcccgaccatggctgt 203938
>emb|AJ851561.1| Gallus gallus mRNA for hypothetical protein, clone 7d7 Length = 3956 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggctacgtcggcgg 174 |||||||||||| |||||||||||||| |||||||| Sbjct: 164 gaagatctgctgtatcggtgctggctatgtcggcgg 199
>ref|NM_001012581.1| Gallus gallus UDP-glucose dehydrogenase (UGDH), mRNA Length = 3956 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggctacgtcggcgg 174 |||||||||||| |||||||||||||| |||||||| Sbjct: 164 gaagatctgctgtatcggtgctggctatgtcggcgg 199
>gb|AC109213.6| Mus musculus chromosome 16, clone RP23-345L20, complete sequence Length = 244558 Score = 54.0 bits (27), Expect = 5e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 331 cttcttcagcactgatgttgagaagca 357 ||||||||||||||||||||||||||| Sbjct: 93249 cttcttcagcactgatgttgagaagca 93223
>gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete sequence Length = 118017 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 320 ggcaagaacctcttcttcagcactgatgtt 349 ||||||||||| |||||||||||||||||| Sbjct: 23705 ggcaagaaccttttcttcagcactgatgtt 23734 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 atggtgaagatctgctgcatcggtg 158 ||||||||||| ||||||||||||| Sbjct: 40852 atggtgaagatttgctgcatcggtg 40828
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 292 cctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgt 348 ||||||||| || |||||||| || | |||||||||||||| |||||||| ||||| Sbjct: 65540 cctcgatgaggtggtcaaggctcgccgcggcaagaacctcttattcagcaccgatgt 65596
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 292 cctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgt 348 ||||||||| || |||||||| || | |||||||||||||| |||||||| ||||| Sbjct: 300482 cctcgatgaggtggtcaaggctcgccgcggcaagaacctcttattcagcaccgatgt 300538
>gb|AY795899.1| Dunaliella salina UDP-glucose dehydrogenase mRNA, complete cds Length = 1940 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 495 agatcgtcgtcgagaagtccaccgtccccgtcaagaccgcagaggccat 543 ||||||| || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 459 agatcgttgtggagaagtccacagtccctgtgaagacggcagaggccat 507
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 292 cctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgt 348 ||||||||| || |||||||| || | |||||||||||||| |||||||| ||||| Sbjct: 300482 cctcgatgaggtggtcaaggctcgccgcggcaagaacctcttattcagcaccgatgt 300538
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 292 cctcgatgatgttgtcaaggcctgcaggggcaagaacctcttcttcagcactgatgt 348 ||||||||| || |||||||| || | |||||||||||||| |||||||| ||||| Sbjct: 300479 cctcgatgaggtggtcaaggctcgccgcggcaagaacctcttattcagcaccgatgt 300535
>ref|NM_031325.1| Rattus norvegicus UDP-glucose dehydrogenase (Ugdh), mRNA Length = 2318 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggctacgtcggcgg 174 ||||||||| ||||| ||||| |||||||||||||| Sbjct: 125 gaagatctgttgcattggtgcgggctacgtcggcgg 160
>dbj|AB013732.1| Rattus norvegicus mRNA for UDP-glucose dehydrogeanse, complete cds Length = 2318 Score = 48.1 bits (24), Expect = 0.031 Identities = 33/36 (91%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggctacgtcggcgg 174 ||||||||| ||||| ||||| |||||||||||||| Sbjct: 125 gaagatctgttgcattggtgcgggctacgtcggcgg 160
>ref|NM_174211.2| Bos taurus UDP-glucose dehydrogenase (UGDH), mRNA Length = 2871 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggcta 165 ||||||||||||||||||||| ||||| Sbjct: 141 gaagatctgctgcatcggtgcaggcta 167
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 152 atcggtgctggctacgtcggcggcccgacaatggc 186 ||||| || ||||| |||||||||||||||||||| Sbjct: 647600 atcggcgccggctatgtcggcggcccgacaatggc 647566
>gb|AF095792.1|AF095792 Bos taurus UDP-glucose dehydrogenase (UDPGDH) mRNA, complete cds Length = 2871 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 139 gaagatctgctgcatcggtgctggcta 165 ||||||||||||||||||||| ||||| Sbjct: 141 gaagatctgctgcatcggtgcaggcta 167
>ref|NM_102419.3| Arabidopsis thaliana UDP-glucose 6-dehydrogenase AT1G26570 mRNA, complete cds Length = 1712 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 425 ggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtcc 484 ||||| ||||| || || || ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 411 ggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgctgatgtctcc 470 Query: 485 aa 486 || Sbjct: 471 aa 472
>gb|AY212254.1| Synthetic construct Homo sapiens uridine diphosphoglucose dehydrogenase mRNA, complete cds Length = 1512 Score = 44.1 bits (22), Expect = 0.48 Identities = 25/26 (96%) Strand = Plus / Plus Query: 143 atctgctgcatcggtgctggctacgt 168 ||||||||||||||||| |||||||| Sbjct: 45 atctgctgcatcggtgccggctacgt 70
>ref|XM_384408.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04232.1) partial mRNA Length = 1815 Score = 44.1 bits (22), Expect = 0.48 Identities = 37/42 (88%) Strand = Plus / Plus Query: 387 ccgtcaacacccccaccaagacccgtggtctgggagccggca 428 |||||||||||||||||||| ||||||| | || ||||||| Sbjct: 383 ccgtcaacacccccaccaagtaccgtggtgttggtgccggca 424
>gb|AY143922.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1446 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 425 ggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtcc 484 ||||| ||||| || || || ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 292 ggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgctgatgtctcc 351 Query: 485 aa 486 || Sbjct: 352 aa 353
>emb|BX294135.1| Pirellula sp. strain 1 complete genome; segment 3/24 Length = 340750 Score = 44.1 bits (22), Expect = 0.48 Identities = 34/38 (89%) Strand = Plus / Plus Query: 149 tgcatcggtgctggctacgtcggcggcccgacaatggc 186 ||||||||||| ||||||||||| || ||||| ||||| Sbjct: 308724 tgcatcggtgccggctacgtcggtggtccgacgatggc 308761
>gb|AY070758.1| Arabidopsis thaliana At1g26570/T1K7_6 mRNA, complete cds Length = 1707 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 425 ggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtcc 484 ||||| ||||| || || || ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 410 ggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgctgatgtctcc 469 Query: 485 aa 486 || Sbjct: 470 aa 471
>emb|BX814676.1|CNS0AAJL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB89ZA07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1649 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 425 ggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtcc 484 ||||| ||||| || || || ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 397 ggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgctgatgtctcc 456 Query: 485 aa 486 || Sbjct: 457 aa 458
>gb|AC013427.3|T1K7 Sequence of BAC T1K7 from Arabidopsis thaliana chromosome 1, complete sequence Length = 89473 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Minus Query: 425 ggcaaggctgccgacctcacctactgggagagcgccgcccggatgatcgccgatgtgtcc 484 ||||| ||||| || || || ||||||||||| || || ||||||||||| ||||| ||| Sbjct: 17351 ggcaaagctgctgatcttacttactgggagagtgctgctcggatgatcgctgatgtctcc 17292 Query: 485 aa 486 || Sbjct: 17291 aa 17290
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Plus Query: 142 gatctgctgcatcggtgctggctacgtcggcggcccgacaatggc 186 |||||||||||||||||| ||||| || || || ||||| ||||| Sbjct: 198914 gatctgctgcatcggtgcgggctatgtgggtggtccgaccatggc 198958
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 359 gtcgccgaggccgacatcatc 379 ||||||||||||||||||||| Sbjct: 484125 gtcgccgaggccgacatcatc 484145
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 gcagtgcgcgcccctcccctcctc 87 |||||||| ||||||||||||||| Sbjct: 134190 gcagtgcgtgcccctcccctcctc 134167
>gb|AC109509.20| Mus musculus chromosome 14, clone RP23-16M15, complete sequence Length = 216410 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 cttcttctctgcataccaagaagt 42 ||||||||||||||||| |||||| Sbjct: 25018 cttcttctctgcatacctagaagt 25041
>ref|NM_019919.2| Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 1, mRNA Length = 6712 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 142 cgcgcccctcccctcctctc 161
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 gatcgtcgtcgagaagtccaccgt 519 |||| ||||||||||||||||||| Sbjct: 3252002 gatcatcgtcgagaagtccaccgt 3252025
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 gatcgtcgtcgagaagtccaccgt 519 |||| ||||||||||||||||||| Sbjct: 3272787 gatcatcgtcgagaagtccaccgt 3272810
>gb|AY194919.1| Tachyglossus aculeatus clone TaG2FL4 interferon-alpha gene, complete cds Length = 1654 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aagatggtgaagatctgctg 150 |||||||||||||||||||| Sbjct: 1155 aagatggtgaagatctgctg 1136
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 gatcgtcgtcgagaagtccaccgt 519 |||| ||||||||||||||||||| Sbjct: 3253916 gatcatcgtcgagaagtccaccgt 3253939
>gb|AC002287.1|HUAC002287 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-237H1 ~complete genomic sequence, complete sequence Length = 188636 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 caagaacctcttcttcagca 341 |||||||||||||||||||| Sbjct: 49951 caagaacctcttcttcagca 49932
>gb|AC126550.3| Mus musculus BAC clone RP24-405L5 from chromosome 17, complete sequence Length = 171820 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 137154 cgcgcccctcccctcctctc 137135
>ref|NM_021587.1| Rattus norvegicus latent transforming growth factor beta binding protein 1 (Ltbp1), mRNA Length = 6244 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 119 cgcgcccctcccctcctctc 138
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 ctgctgcatcggtgctggct 164 |||||||||||||||||||| Sbjct: 933150 ctgctgcatcggtgctggct 933131
>gb|AC080008.23| Homo sapiens 3 BAC RP11-615P1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 197883 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 ccccgcattgacgcctggaa 261 |||||||||||||||||||| Sbjct: 21882 ccccgcattgacgcctggaa 21863
>ref|XM_796838.1| PREDICTED: Strongylocentrotus purpuratus similar to protein-tyrosine kinase fyn isoform c, transcript variant 3 (LOC577286), mRNA Length = 1944 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cagcagcttcttctctgcat 32 |||||||||||||||||||| Sbjct: 482 cagcagcttcttctctgcat 463
>ref|XM_796789.1| PREDICTED: Strongylocentrotus purpuratus similar to protein-tyrosine kinase fyn isoform c, transcript variant 2 (LOC577286), mRNA Length = 2073 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cagcagcttcttctctgcat 32 |||||||||||||||||||| Sbjct: 482 cagcagcttcttctctgcat 463
>ref|XM_775015.1| PREDICTED: Strongylocentrotus purpuratus similar to protein-tyrosine kinase fyn isoform c, transcript variant 1 (LOC577286), mRNA Length = 2100 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cagcagcttcttctctgcat 32 |||||||||||||||||||| Sbjct: 482 cagcagcttcttctctgcat 463
>emb|X57144.1|HHRNAPOP H. halobium RNA polymerase subunit operon Length = 11208 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 agatcttctccgagttgctg 110 |||||||||||||||||||| Sbjct: 6914 agatcttctccgagttgctg 6933
>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29 Length = 310550 Score = 40.1 bits (20), Expect = 7.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 500 gtcgtcgagaagtccaccgtccccgtca 527 |||||| || |||||||||||||||||| Sbjct: 67041 gtcgtccaggagtccaccgtccccgtca 67014
>dbj|AK126149.1| Homo sapiens cDNA FLJ44161 fis, clone THYMU2033070 Length = 1919 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 ccgcagaggccattgagaag 550 |||||||||||||||||||| Sbjct: 918 ccgcagaggccattgagaag 937
>gb|AC022826.12| Homo sapiens chromosome 8, clone RP11-99A14, complete sequence Length = 168839 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 ccgcagaggccattgagaag 550 |||||||||||||||||||| Sbjct: 49414 ccgcagaggccattgagaag 49395
>gb|AC027018.9| Homo sapiens chromosome 8, clone RP11-463D19, complete sequence Length = 181322 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 ccgcagaggccattgagaag 550 |||||||||||||||||||| Sbjct: 167515 ccgcagaggccattgagaag 167496
>ref|XM_939430.1| PREDICTED: Homo sapiens hypothetical protein LOC650347 (LOC650347), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 ccgcagaggccattgagaag 550 |||||||||||||||||||| Sbjct: 912 ccgcagaggccattgagaag 931
>ref|XM_929185.1| PREDICTED: Homo sapiens hypothetical protein LOC646235 (LOC646235), mRNA Length = 1907 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 ccgcagaggccattgagaag 550 |||||||||||||||||||| Sbjct: 912 ccgcagaggccattgagaag 931
>gb|AF346434.1|F346434S01 Mus musculus latent transforming growth factor beta binding protein (Ltbp1) gene, exon 1 Length = 1840 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 701 cgcgcccctcccctcctctc 720
>gb|AC130450.3| Homo sapiens chromosome 16 clone CTA-237H1, complete sequence Length = 183842 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 caagaacctcttcttcagca 341 |||||||||||||||||||| Sbjct: 45551 caagaacctcttcttcagca 45532
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 ccgatctacgagcctggcctcgat 298 |||||||||||||| ||||||||| Sbjct: 2669097 ccgatctacgagcccggcctcgat 2669074
>gb|AC127459.3| Homo sapiens chromosome 16 clone RP11-20G6, complete sequence Length = 172331 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 caagaacctcttcttcagca 341 |||||||||||||||||||| Sbjct: 152323 caagaacctcttcttcagca 152304
>gb|AC134235.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030J04, complete sequence Length = 153431 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gtgcgcgcccctcccctcct 86 |||||||||||||||||||| Sbjct: 106843 gtgcgcgcccctcccctcct 106862
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 tcgccgaggccgacatcatc 379 |||||||||||||||||||| Sbjct: 5100918 tcgccgaggccgacatcatc 5100899
>gb|AE005138.1| Halobacterium sp. NRC-1 section 169 of 170 of the complete genome Length = 10529 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 agatcttctccgagttgctg 110 |||||||||||||||||||| Sbjct: 4919 agatcttctccgagttgctg 4900
>gb|AC154616.2| Mus musculus BAC clone RP23-319O9 from 14, complete sequence Length = 179927 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 19 cttcttctctgcataccaagaagt 42 ||||||||||||||||| |||||| Sbjct: 178755 cttcttctctgcatacctagaagt 178778
>gb|AF022889.1|AF022889 Mus musculus latent TGF beta binding protein (LTBP-1) mRNA, complete cds Length = 6240 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 107 cgcgcccctcccctcctctc 126
>gb|AC154178.1| Mus musculus BAC clone RP23-465N18 from 17, complete sequence Length = 191399 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 2151 cgcgcccctcccctcctctc 2132
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 gtcgccgaggccgacatcatcttc 382 |||||||| ||||||||||||||| Sbjct: 1681278 gtcgccgaagccgacatcatcttc 1681301
>emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chromosome 4, complete sequence Length = 216190 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 acccccaccaagacccgtgg 414 |||||||||||||||||||| Sbjct: 18095 acccccaccaagacccgtgg 18114
>gb|M55431.1|RATTGFB Rat transforming growth factor-beta (TGF-beta) masking protein large subunit, complete cds Length = 6244 Score = 40.1 bits (20), Expect = 7.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cgcgcccctcccctcctctc 89 |||||||||||||||||||| Sbjct: 119 cgcgcccctcccctcctctc 138 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,232,730 Number of Sequences: 3902068 Number of extensions: 4232730 Number of successful extensions: 105052 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 123 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103721 Number of HSP's gapped (non-prelim): 1290 length of query: 553 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 530 effective length of database: 17,143,297,704 effective search space: 9085947783120 effective search space used: 9085947783120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
