Clone Information

BLAST Search Result

Clone Name	bart21c08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL5A_ORYSA (P49625) 60S ribosomal protein L5-1	275	5e-74
2	RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2	262	6e-70
3	RL5_ARATH (P49227) 60S ribosomal protein L5	255	6e-68
4	RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5	254	1e-67
5	RL5_CAEEL (P49405) 60S ribosomal protein L5	198	1e-50
6	RL5_STYCL (Q26481) 60S ribosomal protein L5	192	6e-49
7	RL5A_XENLA (P15125) 60S ribosomal protein L5-A	191	1e-48
8	RL5_DUNSA (O22608) 60S ribosomal protein L5	191	1e-48
9	RL5B_XENLA (P15126) 60S ribosomal protein L5-B	191	2e-48
10	RL5_CHICK (P22451) 60S ribosomal protein L5	189	5e-48
11	RL5_HUMAN (P46777) 60S ribosomal protein L5	188	8e-48
12	RL5_HELAN (O65353) 60S ribosomal protein L5	188	8e-48
13	RL5_MACFA (Q4R5M0) 60S ribosomal protein L5	187	2e-47
14	RL5_RAT (P09895) 60S ribosomal protein L5	186	3e-47
15	RL5_ANOGA (O44248) 60S ribosomal protein L5	186	4e-47
16	RL5_BOMMO (O76190) 60S ribosomal protein L5	185	7e-47
17	RL5_MOUSE (P47962) 60S ribosomal protein L5	185	9e-47
18	RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosoma...	178	1e-44
19	RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)	173	3e-43
20	RL5B_SCHPO (O74306) 60S ribosomal protein L5-B	155	1e-37
21	RL5A_SCHPO (P52822) 60S ribosomal protein L5-A	155	1e-37
22	RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)	140	3e-33
23	RL18_METTH (O26130) 50S ribosomal protein L18P	68	2e-11
24	RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18)...	63	7e-10
25	RL18_ARCFU (O28373) 50S ribosomal protein L18P	62	9e-10
26	RL18_METAC (Q8TRS8) 50S ribosomal protein L18P	61	2e-09
27	RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)	60	5e-09
28	RL18_SULTO (Q975J9) 50S ribosomal protein L18P	60	6e-09
29	RL18_AERPE (Q9YF94) 50S ribosomal protein L18P	59	8e-09
30	RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P	59	8e-09
31	RL18_METMP (Q6LXD4) 50S ribosomal protein L18P	58	2e-08
32	RL18_METJA (P54044) 50S ribosomal protein L18P	57	5e-08
33	RL18_METVA (P14033) 50S ribosomal protein L18P	56	7e-08
34	RL18_SULSO (Q9UX88) 50S ribosomal protein L18P	54	3e-07
35	RL18_THEVO (Q97BV7) 50S ribosomal protein L18P	52	2e-06
36	RL18_SULAC (O05640) 50S ribosomal protein L18P	51	2e-06
37	RL18_METKA (Q8TZA5) 50S ribosomal protein L18P	49	8e-06
38	RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P	49	1e-05
39	RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P	42	0.001
40	RL18_PYRHO (O59438) 50S ribosomal protein L18P	42	0.001
41	RL18_THEAC (Q9HIS6) 50S ribosomal protein L18P	42	0.002
42	RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P	41	0.002
43	RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)	41	0.002
44	RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)	41	0.003
45	LIPA_HALSA (Q9HN78) Probable lipoyl synthase (EC 2.8.1.-) (Lipoi...	32	1.7
46	FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reducta...	31	2.3
47	RIC8_DROPS (Q29IC2) Synembryn (Protein Ric-8)	31	3.0
48	SOX1_MOUSE (P53783) SOX-1 protein	31	3.0
49	FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3	31	3.0
50	NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)	30	3.9
51	VA31_VACCV (P24760) Protein A31	30	5.0
52	HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)	30	6.6
53	RIC8_DROME (Q9W358) Synembryn (Protein Ric-8)	30	6.6
54	SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven ...	30	6.6
55	SECA_BACSU (P28366) Preprotein translocase secA subunit	30	6.6
56	FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3	30	6.6
57	ZDHC7_RAT (Q923G5) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zin...	29	8.6
58	ZDHC7_MOUSE (Q91WU6) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Z...	29	8.6
59	ZDHC7_HUMAN (Q9NXF8) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Z...	29	8.6
60	RL18_THEMA (Q9ZAE3) 50S ribosomal protein L18	29	8.6

>RL5A_ORYSA (P49625) 60S ribosomal protein L5-1|
          Length = 304

 Score =  275 bits (704), Expect = 5e-74
 Identities = 138/163 (84%), Positives = 143/163 (87%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK QKT AY               TDYRAR+RLTNQDKNKYNTPKYRFVVRFTNKD+TA
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLK R LDQEYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 455 VEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           +EATGED+ VEP+DERRPFRALLDVGLIRTTTGNRVFGALKGA
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGA 166

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>RL5B_ORYSA (Q8L4L4) 60S ribosomal protein L5-2|
          Length = 304

 Score =  262 bits (669), Expect = 6e-70
 Identities = 135/163 (82%), Positives = 139/163 (85%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK QKT AY               TDYRAR+RLTNQDKNKYNTPKYRFV   TNKD+TA
Sbjct: 7   FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITA 63

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVL  R LDQEYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGN 123

Query: 455 VEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VEATGED+ VEP+DERRPFRALLDVGLIRTTTGNRVFGALKGA
Sbjct: 124 VEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGA 166

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>RL5_ARATH (P49227) 60S ribosomal protein L5|
          Length = 301

 Score =  255 bits (652), Expect = 6e-68
 Identities = 128/165 (77%), Positives = 139/165 (84%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           MVFVK+ K+ AY               TDYRAR+RL NQDKNKYNTPKYRFVVRFTNKD+
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
            AQIV A+IAGDIV A+AY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK  ++D EYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 449 GNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           GNVEATGEDFSVEP+D RRPFRALLDVGLIRTTTGNRVFGALKGA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGA 165

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>RL5_CUCSA (Q6UNT2) 60S ribosomal protein L5|
          Length = 302

 Score =  254 bits (649), Expect = 1e-67
 Identities = 126/165 (76%), Positives = 140/165 (84%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M F K QKT+AY               TDYRAR+RL NQDKNKYNTPKYRFVVR +NKD+
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           TAQI+ A+IAGD+V+A+AYSHELP+YGLEVGLTNYAAAYCTGLLLARRVLK  ++D EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 449 GNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           GNVEATGED+SVEP+D RRPFRALLDVGLIRTTTGNRVFGALKGA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGA 165

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>RL5_CAEEL (P49405) 60S ribosomal protein L5|
          Length = 293

 Score =  198 bits (503), Expect = 1e-50
 Identities = 99/164 (60%), Positives = 119/164 (72%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M  VK  K +AY               TDY AR RLT QDKNKYNTPKYR +VR TNKDV
Sbjct: 1   MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
            AQ+ Y+ I GD+V+A+AYSHELPRYGL+VGLTNYAAAY TGLLLARR LK   LD  Y+
Sbjct: 61  VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120

Query: 449 GNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKG 580
           G+ E TGED++VE   +R PF+A+LD+GL RTTTG+++F  +KG
Sbjct: 121 GHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKG 164

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>RL5_STYCL (Q26481) 60S ribosomal protein L5|
          Length = 294

 Score =  192 bits (488), Expect = 6e-49
 Identities = 100/164 (60%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VRFTNKD+  
Sbjct: 2   FVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+V+ AAY+HELPRYG++VGLTNYAAAYCTGLLL+RR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQ 121

Query: 455 VEATGEDFSVEPSDER-RPFRALLDVGLIRTTTGNRVFGALKGA 583
            E  G++F VE  D +   FRA LDVGL RTTTG +VFGA+KGA
Sbjct: 122 TEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGA 165

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>RL5A_XENLA (P15125) 60S ribosomal protein L5-A|
          Length = 295

 Score =  191 bits (485), Expect = 1e-48
 Identities = 98/164 (59%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGIKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQ 121

Query: 455 VEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE TG++++VE  D E   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVTGDEYNVESIDGEPGAFTCYLDAGLTRTTTGNKVFGALKGA 165

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>RL5_DUNSA (O22608) 60S ribosomal protein L5|
          Length = 271

 Score =  191 bits (485), Expect = 1e-48
 Identities = 100/166 (60%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M +VK  KT  Y               TDYRARLRL  QDKNKYNT KYR VVRF+NK+V
Sbjct: 1   MGYVKVVKTSPYFSRYQVKYRRRRQGKTDYRARLRLVRQDKNKYNTHKYRLVVRFSNKNV 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           T QIVY+TI GD+VMAAAYS ELP YGL+VGLTNY+AAYC GLL+ARR+L   +L   Y+
Sbjct: 61  TCQIVYSTIQGDVVMAAAYSKELPNYGLKVGLTNYSAAYCVGLLVARRILTKLNLADTYK 120

Query: 449 GNVEATGEDFSVEP-SDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G  E  GED++VEP  D  +PF  LLD GL RT+TG++VF A+KGA
Sbjct: 121 GQEEPDGEDYNVEPVEDGPKPFYCLLDTGLKRTSTGSKVFAAMKGA 166

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>RL5B_XENLA (P15126) 60S ribosomal protein L5-B|
          Length = 295

 Score =  191 bits (484), Expect = 2e-48
 Identities = 98/164 (59%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKVYEGQ 121

Query: 455 VEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE TG++++VE  D E   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVTGDEYNVESVDGEPGAFTCYLDAGLTRTTTGNKVFGALKGA 165

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>RL5_CHICK (P22451) 60S ribosomal protein L5|
          Length = 296

 Score =  189 bits (480), Expect = 5e-48
 Identities = 97/164 (59%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    LD+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNKFGLDKIYEGQ 121

Query: 455 VEATGEDFSVEPSDER-RPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE TG++++VE  D +   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVTGDEYNVESVDGKPGAFTCYLDAGLARTTTGNKVFGALKGA 165

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>RL5_HUMAN (P46777) 60S ribosomal protein L5|
          Length = 296

 Score =  188 bits (478), Expect = 8e-48
 Identities = 96/164 (58%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 455 VEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE TG++++VE  D +   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGA 165

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>RL5_HELAN (O65353) 60S ribosomal protein L5|
          Length = 297

 Score =  188 bits (478), Expect = 8e-48
 Identities = 97/166 (58%), Positives = 118/166 (71%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M FVK  K + Y               TDY AR RL  QDKNKYNTPKYR VVRF+N+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFKRRREGKTDYFARKRLIAQDKNKYNTPKYRLVVRFSNRDI 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           T Q+ Y+ I GD ++ AAY+HELP+YG++VGLTNYAAAYCTGLLLAR++L    LD+ Y 
Sbjct: 61  TCQVAYSRIEGDKILCAAYAHELPQYGVKVGLTNYAAAYCTGLLLARKLLSQLGLDKLYI 120

Query: 449 GNVEATGEDFSVEP-SDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G+ E TGE+F+V+P  D    FR  LDVGL+RTTTG RVFGA+KGA
Sbjct: 121 GSTEVTGEEFNVKPVEDGPGAFRCYLDVGLMRTTTGARVFGAMKGA 166

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>RL5_MACFA (Q4R5M0) 60S ribosomal protein L5|
          Length = 296

 Score =  187 bits (474), Expect = 2e-47
 Identities = 95/164 (57%), Positives = 116/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+H+LP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHKLPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 455 VEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE TG++++VE  D +   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGA 165

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>RL5_RAT (P09895) 60S ribosomal protein L5|
          Length = 296

 Score =  186 bits (473), Expect = 3e-47
 Identities = 95/164 (57%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 455 VEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE  G++++VE  D +   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVNGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGA 165

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>RL5_ANOGA (O44248) 60S ribosomal protein L5|
          Length = 327

 Score =  186 bits (472), Expect = 4e-47
 Identities = 97/166 (58%), Positives = 115/166 (69%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M FVK  K + Y               TDY AR RL  QDKNKYNTPK+R +VR +N+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           T QI Y  I GD ++ AAYSHELPRYG++VGLTNYAAAYCTGLL+ARR+L+   LD  Y 
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120

Query: 449 GNVEATGEDFSVEPSDE-RRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G  + TGE++ VEP DE    FR  LDVGL RTTTG+RVFGA+KGA
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGA 166

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>RL5_BOMMO (O76190) 60S ribosomal protein L5|
          Length = 299

 Score =  185 bits (470), Expect = 7e-47
 Identities = 97/166 (58%), Positives = 114/166 (68%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M FVK  K + Y               TDY AR RL  QDKNKYNTPKYR +VR +NKDV
Sbjct: 1   MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           T Q+ Y+ I GD ++ AAYSHELPRYG++VGLTNYAAAY TGLLLARR+L+   LD  Y 
Sbjct: 61  TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGLLLARRLLQRLGLDTLYT 120

Query: 449 GNVEATGEDFSVEPSDE-RRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G  + TG++++VEP D     FR  LDVGL RTTTG RVFGA+KGA
Sbjct: 121 GTTDVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGRRVFGAMKGA 166

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>RL5_MOUSE (P47962) 60S ribosomal protein L5|
          Length = 296

 Score =  185 bits (469), Expect = 9e-47
 Identities = 95/164 (57%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVRFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    +D+ YEG 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQ 121

Query: 455 VEATGEDFSVEPSD-ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           VE  G +++VE  D +   F   LD GL RTTTGN+VFGALKGA
Sbjct: 122 VEVNGGEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGA 165

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>RL5_YEAST (P26321) 60S ribosomal protein L5 (L1) (YL3) (Ribosomal 5S|
           RNA-binding protein)
          Length = 296

 Score =  178 bits (451), Expect = 1e-44
 Identities = 94/164 (57%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           F K+ K+ AYS              TDY  R RL  Q K KYNTPKYR VVRFTNKD+  
Sbjct: 2   FQKDAKSSAYSSRFQTPFRRRREGKTDYYQRKRLVTQHKAKYNTPKYRLVVRFTNKDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI+ +TI GD+V+AAAYSHELPRYG+  GLTN+AAAY TGLL+ARR L+   LD+ Y+G 
Sbjct: 62  QIISSTITGDVVLAAAYSHELPRYGITHGLTNWAAAYATGLLIARRTLQRLGLDETYKGV 121

Query: 455 VEATGE-DFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
            E  GE + +    D  RPF+  LD+GL RTTTG RVFGALKGA
Sbjct: 122 EEVEGEYELTEAVEDGPRPFKVFLDIGLQRTTTGARVFGALKGA 165

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>RL5_NEUCR (O59953) 60S ribosomal protein L5 (CPR4)|
          Length = 301

 Score =  173 bits (439), Expect = 3e-43
 Identities = 97/169 (57%), Positives = 111/169 (65%), Gaps = 4/169 (2%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M F K  K  AY               TDY AR RL  Q KNKYN PKYR VVRFTN+D+
Sbjct: 1   MAFHKLVKNSAYYSRFQTKYKRRREGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDI 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
             QIV + I GD V A+AYSHEL  YG+E GLTN+AAAY TGLLLARRVLK   LD+ ++
Sbjct: 61  ILQIVSSEITGDKVFASAYSHELKAYGIEHGLTNWAAAYATGLLLARRVLKKLGLDETFK 120

Query: 449 GNVEATGEDFSVEPSD----ERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G  EA GE    E ++    ERRPF+A LDVGL RT+TG RVFGA+KGA
Sbjct: 121 GVEEADGEYKLTEAAETDDGERRPFKAFLDVGLARTSTGARVFGAMKGA 169

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>RL5B_SCHPO (O74306) 60S ribosomal protein L5-B|
          Length = 294

 Score =  155 bits (391), Expect = 1e-37
 Identities = 86/166 (51%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M F+K  K+  Y               TDY AR RL  Q KNKYN PKYR VVRF+N+ V
Sbjct: 1   MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           T QIV + + GD V+A A+S ELPRYG++ GL N+ AAY TGLL+ARR L    L  +YE
Sbjct: 61  TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120

Query: 449 GNVEATGE-DFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G  E  GE + +    D  RPF+  LDVGL RT+TG+RVFGA+KGA
Sbjct: 121 GVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGA 166

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>RL5A_SCHPO (P52822) 60S ribosomal protein L5-A|
          Length = 294

 Score =  155 bits (391), Expect = 1e-37
 Identities = 86/166 (51%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
 Frame = +2

Query: 89  MVFVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDV 268
           M F+K  K+  Y               TDY AR RL  Q KNKYN PKYR VVRF+N+ V
Sbjct: 1   MPFIKAVKSSPYFSRYQTKYRRRREGKTDYYARKRLIAQAKNKYNAPKYRLVVRFSNRFV 60

Query: 269 TAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYE 448
           T QIV + + GD V+A A+S ELPRYG++ GL N+ AAY TGLL+ARR L    L  +YE
Sbjct: 61  TCQIVSSRVNGDYVLAHAHSSELPRYGIKWGLANWTAAYATGLLVARRALAKVGLADKYE 120

Query: 449 GNVEATGE-DFSVEPSDERRPFRALLDVGLIRTTTGNRVFGALKGA 583
           G  E  GE + +    D  RPF+  LDVGL RT+TG+RVFGA+KGA
Sbjct: 121 GVTEPEGEFELTEAIEDGPRPFKVFLDVGLKRTSTGSRVFGAMKGA 166

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>RL5_PIG (Q95276) 60S ribosomal protein L5 (Fragment)|
          Length = 124

 Score =  140 bits (352), Expect = 3e-33
 Identities = 70/122 (57%), Positives = 84/122 (68%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTA 274
           FVK  K +AY               TDY AR RL  QDKNKYNTPKYR +VR TN+D+  
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIIC 61

Query: 275 QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGN 454
           QI YA I GD+++ AAY+HELP+YG++VGLTNYAAAYCTGLLLARR+L    + + Y G 
Sbjct: 62  QIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMXKIYGGQ 121

Query: 455 VE 460
           VE
Sbjct: 122 VE 123

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>RL18_METTH (O26130) 50S ribosomal protein L18P|
          Length = 192

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 51/138 (36%), Positives = 66/138 (47%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TDYRAR ++         T K R VVR T   V AQI+   + GD  + +A+S +L + G
Sbjct: 19  TDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMG 71

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
              G +N AAAY TG L  +R LK        EG  E                  A+LD+
Sbjct: 72  WLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------------------AVLDI 105

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL     G++VF ALKGA
Sbjct: 106 GLRPAIRGSKVFAALKGA 123

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>RL18_HALSA (P50562) 50S ribosomal protein L18P (HCuL18) (HSal18) (HHal18)|
           (HL13)
          Length = 182

 Score = 62.8 bits (151), Expect = 7e-10
 Identities = 49/138 (35%), Positives = 62/138 (44%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TDY  RLRL    K        R V R +NK VTAQ+V     GD  +A+A+S +L  YG
Sbjct: 18  TDYHQRLRLLKSGKP-------RLVARKSNKHVTAQLVTTGPDGDETVASAHSSDLDAYG 70

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
                 N  AAY TGLL  +R +                  D  VE         A+LD+
Sbjct: 71  WAAPTGNLPAAYLTGLLAGQRAV------------------DAGVE--------EAVLDI 104

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL   T G++VF   +GA
Sbjct: 105 GLNTATPGSKVFAIQEGA 122

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>RL18_ARCFU (O28373) 50S ribosomal protein L18P|
          Length = 189

 Score = 62.4 bits (150), Expect = 9e-10
 Identities = 49/138 (35%), Positives = 65/138 (47%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           T+YR RL+L    K        R VVR TN+ V AQIV     GD V+    S  L  +G
Sbjct: 21  TNYRKRLKLLLSRKP-------RLVVRITNRRVIAQIVEYAPEGDRVVVGVDSAMLREFG 73

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
            +  L N  AAY TG+L+A++ L+            +  GE              A+LD+
Sbjct: 74  WKGDLNNTPAAYLTGILIAKKALQ------------KGIGE--------------AVLDI 107

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL   T G+RVF  L+GA
Sbjct: 108 GLHTPTRGSRVFAVLRGA 125

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>RL18_METAC (Q8TRS8) 50S ribosomal protein L18P|
          Length = 174

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 2/139 (1%)
 Frame = +2

Query: 170 TDYRARLRL--TNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR 343
           T+Y  RL+L  + QD         R VVR ++++V  Q++  T  GDI  ++A S+EL +
Sbjct: 19  TNYHLRLKLLLSRQD---------RVVVRKSSRNVQIQLIAPTPDGDITYSSAVSNELAK 69

Query: 344 YGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALL 523
           YG      N  AAY TGLL        + L + YEG +                     L
Sbjct: 70  YGYTGATGNTTAAYLTGLLFG-----LKSLQKGYEGGI---------------------L 103

Query: 524 DVGLIRTTTGNRVFGALKG 580
           D+GL  ++ G+RV+ ALKG
Sbjct: 104 DIGLQASSAGSRVYAALKG 122

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>RL18_HALMA (P14123) 50S ribosomal protein L18P (Hmal18) (Hl12)|
          Length = 186

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 48/138 (34%), Positives = 60/138 (43%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TDY  RLRL    K        R V R +NK V AQ+V     GD  +A+A+S +L  YG
Sbjct: 18  TDYHQRLRLLKSGKP-------RLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYG 70

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
            E    N  +AY TGLL   R           E  VE                  A+LD+
Sbjct: 71  WEAPTGNMPSAYLTGLLAGLRA---------QEAGVE-----------------EAVLDI 104

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL   T G++VF   +GA
Sbjct: 105 GLNSPTPGSKVFAIQEGA 122

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>RL18_SULTO (Q975J9) 50S ribosomal protein L18P|
          Length = 196

 Score = 59.7 bits (143), Expect = 6e-09
 Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
 Frame = +2

Query: 173 DYRARLRLTNQDKNKY---------NTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAY 325
           +YR + R   + K  Y         NT   R VVR TNK + AQI      GD+++ AA+
Sbjct: 6   NYRVKYRRRREGKTNYYKRYTYVINNTT--RLVVRLTNKYIIAQIAKFNPKGDVIVVAAH 63

Query: 326 SHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDER 502
           S EL  ++G +  L N  AAY TG LL  R LK    +                      
Sbjct: 64  SMELAKKFGWKGDLNNTPAAYLTGYLLGVRALKAGIKE---------------------- 101

Query: 503 RPFRALLDVGLIRTTTGNRVFGALKGA 583
               A+ D+GL     G+R+F A+KGA
Sbjct: 102 ----AVADIGLFVPVKGSRIFTAIKGA 124

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>RL18_AERPE (Q9YF94) 50S ribosomal protein L18P|
          Length = 214

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 49/144 (34%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
 Frame = +2

Query: 176 YRARLRLTNQDKNKY-------NTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHE 334
           YR  LR   + K  Y        + K R  VR +N+ +  Q + A I GD V+AAA+S E
Sbjct: 7   YRVPLRRRREGKTNYYRRFRLVKSGKPRMAVRISNEYLWVQFLEARIEGDRVIAAAHSRE 66

Query: 335 L-PRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPF 511
           L  ++G +    N  AAY TG L   R L                          E+   
Sbjct: 67  LIKKFGWKGDGNNTCAAYLTGYLAGLRAL--------------------------EKGVR 100

Query: 512 RALLDVGLIRTTTGNRVFGALKGA 583
            A+LDVGL +   G+RVF ALKGA
Sbjct: 101 EAVLDVGLHKPVKGSRVFAALKGA 124

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>RL18_PYRAE (Q8ZVV7) 50S ribosomal protein L18P|
          Length = 205

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 47/137 (34%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
 Frame = +2

Query: 179 RARLRLTNQDKNK--YNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYGL 352
           R R  LTN  K +    + K R VVR TNK + AQIV A   GD+ +  A +  L ++G 
Sbjct: 13  RRREGLTNYRKRRKLLLSKKPRLVVRKTNKHIIAQIVVAKPQGDVTIVGADTRILAKFGW 72

Query: 353 EVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDVG 532
                N AAAY  GL++  +                          +  RR   A+LD+G
Sbjct: 73  RGDENNVAAAYLLGLVVGYK--------------------------ARARRVEEAILDIG 106

Query: 533 LIRTTTGNRVFGALKGA 583
           L R   G RVF  LKGA
Sbjct: 107 LHRPAPGARVFAVLKGA 123

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>RL18_METMP (Q6LXD4) 50S ribosomal protein L18P|
          Length = 193

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 47/138 (34%), Positives = 62/138 (44%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TD+R RL L    K        R V R +  +VTAQ++     GD+V+ +A+S EL + G
Sbjct: 19  TDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMAYDEKGDVVLVSAHSKELVKMG 71

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
            +    N  AAY TGLLL  + +K                ED             A+LD 
Sbjct: 72  YKGHCGNLPAAYLTGLLLGAKAVK----------------EDVK----------EAVLDK 105

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL R T G  +F  LKGA
Sbjct: 106 GLHRATKGAAIFAVLKGA 123

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>RL18_METJA (P54044) 50S ribosomal protein L18P|
          Length = 195

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 47/138 (34%), Positives = 60/138 (43%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TDYR RL+L    K        R V R T     AQIV     GD  + +A+S EL + G
Sbjct: 19  TDYRKRLKLLLSRKP-------RLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIKLG 71

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
            +    N  +AY TG LL ++ L         +G  E                  A+LD+
Sbjct: 72  YKGHTGNLPSAYLTGYLLGKKALA--------KGYTE------------------AVLDI 105

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL R T GN +F  LKGA
Sbjct: 106 GLHRATKGNAIFAILKGA 123

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>RL18_METVA (P14033) 50S ribosomal protein L18P|
          Length = 195

 Score = 56.2 bits (134), Expect = 7e-08
 Identities = 46/138 (33%), Positives = 63/138 (45%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TD+R RL L    K        R V R +  ++ AQ++     GDIV+ +A+S EL + G
Sbjct: 21  TDFRQRLGLLLSGKP-------RLVARKSLNNIIAQLMAYDEKGDIVLVSAHSRELVKMG 73

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
            +    N  AAY TGLLL ++ ++        EG  E                  A+LD 
Sbjct: 74  YKGHCGNLPAAYLTGLLLGKKAVE--------EGLEE------------------AILDK 107

Query: 530 GLIRTTTGNRVFGALKGA 583
           GL R T G  +F  LKGA
Sbjct: 108 GLHRATKGAAIFAVLKGA 125

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>RL18_SULSO (Q9UX88) 50S ribosomal protein L18P|
          Length = 199

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
 Frame = +2

Query: 173 DYRARLRLTNQDKNKYN-------TPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSH 331
           +Y+ + R   + K  Y        + + RF+VR TNK V  QI      GDI++A+A+S 
Sbjct: 9   NYKVKPRRRREGKTNYYKRYVYVISKQTRFIVRITNKYVIVQIAKIDPKGDIMIASAHSA 68

Query: 332 EL-PRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRP 508
           EL  ++G +    N  AAY TG L   R +K                          R  
Sbjct: 69  ELAKKFGWKGDENNTPAAYLTGYLAGLRAIK--------------------------RGV 102

Query: 509 FRALLDVGLIRTTTGNRVFGALKGA 583
              + D+GL   + GNRVF  +KGA
Sbjct: 103 TECVADIGLHVPSKGNRVFYVIKGA 127

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>RL18_THEVO (Q97BV7) 50S ribosomal protein L18P|
          Length = 160

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 42/137 (30%), Positives = 56/137 (40%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TDY  RLRL             RF+VR TNK + AQI   ++ GD ++A      L +YG
Sbjct: 11  TDYGRRLRLLKSKDR-------RFIVRITNKGIIAQIAEYSVNGDRILATITDKALSKYG 63

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
           +E+   N    Y  G                Y   VEA  +   VE         A+LD+
Sbjct: 64  IELRGNNLQICYLVG----------------YAAGVEA--QKAGVE--------TAVLDI 97

Query: 530 GLIRTTTGNRVFGALKG 580
           G  +   G R+   LKG
Sbjct: 98  GRKKFRKGGRIAACLKG 114

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>RL18_SULAC (O05640) 50S ribosomal protein L18P|
          Length = 197

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 8/145 (5%)
 Frame = +2

Query: 173 DYRARLRLTNQDKNKYNTP-------KYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSH 331
           +YR + R   + K  Y T          RFV R TNK V   +      GDI++A A+S 
Sbjct: 6   NYRIKFRRRREGKTDYYTRYTYVINNAIRFVPRLTNKYVIVSVSKFDQKGDIMIAYAHSI 65

Query: 332 EL-PRYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRP 508
           EL  +YG +    N  AAY TG L   R +K           V+A               
Sbjct: 66  ELVKKYGWKGDTNNTPAAYLTGYLAGLRAVK---------SGVKA--------------- 101

Query: 509 FRALLDVGLIRTTTGNRVFGALKGA 583
             A+ D+GL     G R+F  +KGA
Sbjct: 102 --AVSDIGLFVPVKGGRIFAVIKGA 124

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>RL18_METKA (Q8TZA5) 50S ribosomal protein L18P|
          Length = 202

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 46/144 (31%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
 Frame = +2

Query: 176 YRARLRLTNQDKNKYNTPKY-------RFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHE 334
           YR   R   + K  Y   +        R V R T     AQIV     GD+ +A+A+S E
Sbjct: 10  YRVPFRRRREGKTNYYKRRELIKADAPRLVARKTLNHNIAQIVDFAPHGDVTLASAHSIE 69

Query: 335 LP-RYGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPF 511
           L  ++G +    N  AAY TG L   R L                          ER   
Sbjct: 70  LRNKFGWKGHCGNTPAAYLTGYLCGLRAL--------------------------ERGIE 103

Query: 512 RALLDVGLIRTTTGNRVFGALKGA 583
           RA++D+GL R   G+RVF  LKGA
Sbjct: 104 RAVIDIGLHRPVRGSRVFAMLKGA 127

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>RL18_NANEQ (Q74MJ4) 50S ribosomal protein L18P|
          Length = 195

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 41/138 (29%), Positives = 58/138 (42%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           T YR RL+L    K        R VVR  N ++ AQ+V     GD V+   +S+ L +YG
Sbjct: 19  TVYRKRLKLLLSGKP-------RLVVRRFNSNILAQLVEYDPKGDRVIFTIHSNVLKKYG 71

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
            +    N  +AY  GL+     LK                          R    A+LD+
Sbjct: 72  WKGHRGNLPSAYLVGLIAGYEALK--------------------------RGYKEAVLDI 105

Query: 530 GLIRTTTGNRVFGALKGA 583
           G  ++T GN ++  LKGA
Sbjct: 106 GRYKSTKGNALYAVLKGA 123

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>RL18_PYRAB (Q9V1V4) 50S ribosomal protein L18P|
          Length = 203

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR-Y 346
           T+YR RL+L    K        R VVR +     AQI+     GD  + +A++ EL R +
Sbjct: 19  TNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDF 71

Query: 347 GLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLD 526
           G +    N  +AY  GLL+  +  K           +E                  A+LD
Sbjct: 72  GWKGHCGNTPSAYLLGLLIGYKAKK---------AGIE-----------------EAILD 105

Query: 527 VGLIRTTTGNRVFGALKGA 583
           +GL     G+ VF  LKGA
Sbjct: 106 IGLHPPVRGSSVFAVLKGA 124

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>RL18_PYRHO (O59438) 50S ribosomal protein L18P|
          Length = 203

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR-Y 346
           T+YR RL+L    K        R VVR +     AQI+     GD  + +A++ EL R +
Sbjct: 19  TNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDF 71

Query: 347 GLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLD 526
           G +    N  +AY  GLL+  +  K           +E                  A+LD
Sbjct: 72  GWKGHCGNTPSAYLLGLLIGYKAKK---------AGIE-----------------EAILD 105

Query: 527 VGLIRTTTGNRVFGALKGA 583
           +GL     G+ +F  LKGA
Sbjct: 106 IGLHPPVRGSSIFAVLKGA 124

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>RL18_THEAC (Q9HIS6) 50S ribosomal protein L18P|
          Length = 163

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 36/137 (26%), Positives = 54/137 (39%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYG 349
           TDY  RL+L    +        RF+VR T K V AQ+   +  GD ++       L +YG
Sbjct: 14  TDYSKRLKLLKSREK-------RFIVRITGKGVIAQVAEYSDIGDRILFTVTDKTLAKYG 66

Query: 350 LEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLDV 529
           +++   N    Y  G +          ++ E  G VE+                 A+LD 
Sbjct: 67  VDLRGNNIQVCYLVGYIAG--------IESEKNG-VES-----------------AVLDT 100

Query: 530 GLIRTTTGNRVFGALKG 580
           G  +   G R+   LKG
Sbjct: 101 GRRKFRKGGRIAACLKG 117

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>RL18_PYRKO (Q5JJG7) 50S ribosomal protein L18P|
          Length = 201

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
 Frame = +2

Query: 176 YRARLRLTNQDKNKYN-------TPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHE 334
           YR   R   + K  Y+       + K R VVR T     AQIV     GD  + +A++ E
Sbjct: 7   YRVPFRRRREGKTNYHKRLKLLKSKKPRLVVRKTLNHHIAQIVVYDPKGDKTLVSAHTME 66

Query: 335 LPR-YGLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPF 511
           L R +G +    N  +AY  GLL+  +           +  +E                 
Sbjct: 67  LMRDFGWKGHGGNTPSAYLLGLLIGYKA---------KQAGIE----------------- 100

Query: 512 RALLDVGLIRTTTGNRVFGALKGA 583
            A+LD+GL   T G+ +F  LKGA
Sbjct: 101 EAILDIGLHPPTRGSSIFAVLKGA 124

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>RL18_PYRFU (Q9HH80) 50S ribosomal protein L18P (PfL18)|
          Length = 203

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 40/139 (28%), Positives = 58/139 (41%), Gaps = 1/139 (0%)
 Frame = +2

Query: 170 TDYRARLRLTNQDKNKYNTPKYRFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPR-Y 346
           T+YR RL+L    K        R VVR +     AQI+     GD  + +A++ EL R +
Sbjct: 19  TNYRKRLKLLKSGKP-------RLVVRKSLNHHIAQIIVYDPKGDRTLVSAHTRELIRDF 71

Query: 347 GLEVGLTNYAAAYCTGLLLARRVLKCRDLDQEYEGNVEATGEDFSVEPSDERRPFRALLD 526
           G +    N  +AY  GLL+  +           +  +E                  A+LD
Sbjct: 72  GWKGHCGNTPSAYLLGLLIGYKA---------KQAGIE-----------------EAILD 105

Query: 527 VGLIRTTTGNRVFGALKGA 583
           +GL     G+ VF  LKGA
Sbjct: 106 IGLHPPVRGSSVFAVLKGA 124

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>RL5_RABIT (P19949) 60S ribosomal protein L5 (Fragments)|
          Length = 101

 Score = 40.8 bits (94), Expect = 0.003
 Identities = 22/47 (46%), Positives = 24/47 (51%)
 Frame = +2

Query: 95  FVKNQKTRAYSXXXXXXXXXXXXXXTDYRARLRLTNQDKNKYNTPKY 235
           FVK  K +AY               TDY AR RL  QDKNKYNTP +
Sbjct: 2   FVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPAH 48

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>LIPA_HALSA (Q9HN78) Probable lipoyl synthase (EC 2.8.1.-) (Lipoic acid|
           synthase) (Lipoate synthase) (Lipoyl-acyl-carrier
           protein synthase) (Sulfur insertion protein lipA)
           (Lip-syn)
          Length = 311

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -1

Query: 457 NIALIFLIQITALEHTAGQKQTSAVRCGIVGEADLKTITRKLMGIGSSHHDVTSN-GGVH 281
           NI  +   Q+   +  AG +Q+ +V   +  E+D+ T T  ++G+G   H+V    G + 
Sbjct: 165 NIETVARRQVPVRDRRAGYEQSLSVLEYVTRESDIYTKTSIMLGVGEYDHEVYQTLGDLR 224

Query: 280 NLGSDI 263
             G D+
Sbjct: 225 EAGVDV 230

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>FPRB_MYCLE (O33064) Probable ferredoxin/ferredoxin--NADP reductase (EC|
           1.18.1.2) (FNR)
          Length = 555

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +2

Query: 449 GNVEATGEDFSVEPSDERRPFRALLDVGLIRTTTGNR 559
           GN  ATG +FSV  ++E R F    D GL+ T+ G R
Sbjct: 381 GNQRATGVEFSVTGTEESRRF----DAGLVLTSVGYR 413

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>RIC8_DROPS (Q29IC2) Synembryn (Protein Ric-8)|
          Length = 566

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 124 LQAVPSEVQEKETGEDRLQGQAQAHQPRQEQVQHTKVPVCCAIYQQRCHCPNCVRHHC 297
           L A P E++++E G+ +LQ Q    Q   + +      +C  +YQ       C+R HC
Sbjct: 105 LPATPDELKQQEEGQLQLQEQPSLAQ--SDIIAEALKCLCNLVYQSADCRRQCLRQHC 160

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>SOX1_MOUSE (P53783) SOX-1 protein|
          Length = 391

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/37 (45%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -3

Query: 533 GQHPGAPGKASSHQTAQQKSP-PQWPQHCPHIPDPNH 426
           GQHPGA G+   H  A    P P  P   PH P P H
Sbjct: 214 GQHPGAGGR---HPHAHPAHPHPHHPHAHPHNPQPMH 247

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>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
 Frame = -3

Query: 569 HQTHGFQ*WS**GQHPGAPGKASSH-QTAQQKSPP--QWP---QHCPHIPDPNHGT*AHG 408
           H+ HG        QHP  P   + H Q   Q  PP  Q P   QH  H P+  H T AH 
Sbjct: 386 HRPHGLP------QHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQHIQHHPNHQHQTLAHQ 439

Query: 407 GPKADQ 390
            P   Q
Sbjct: 440 PPPPPQ 445



 Score = 29.3 bits (64), Expect = 8.6
 Identities = 27/86 (31%), Positives = 31/86 (36%), Gaps = 9/86 (10%)
 Frame = -3

Query: 527 HPGAPGKASSHQTAQQKSPPQW-PQHCPHIPDPNHG------T*AHGGPKADQCSTLR-- 375
           H G     S+       S PQ  PQ  PH P   HG         H  P   Q S L+  
Sbjct: 355 HSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPP 414

Query: 374 HSW*GRPQDHNEEAHGNRQQPSRCHQ 297
           HS    P  H +  H N Q  +  HQ
Sbjct: 415 HSQHPPPHQHIQH-HPNHQHQTLAHQ 439

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>NIPB_DROME (Q7PLI2) Nipped-B protein (SCC2 homolog)|
          Length = 2077

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 431  LDQEYEGNVEATGEDFSVEPSDERRPF--RALLDVGLIRTTTGNRVF 565
            L+QE EG+V +  + F +EP ++R  F  + LLD   +     N ++
Sbjct: 942  LEQEKEGDVTSNNDQFDLEPEEQRTDFLQKILLDFLAVNAQEENLIW 988

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>VA31_VACCV (P24760) Protein A31|
          Length = 124

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -1

Query: 373 IVGEADLKTITRKLMGIGSSHHDVTSNGGVHNLGSDI 263
           ++G+  +  +   L  +  S+H VTS+G ++ LGS I
Sbjct: 63  VLGKVTINNLKMMLFYMDLSYHGVTSSGAIYKLGSSI 99

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>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)|
          Length = 1518

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 5/86 (5%)
 Frame = -3

Query: 512 GKASSHQTAQQKSPPQWPQHCPHI-----PDPNHGT*AHGGPKADQCSTLRHSW*GRPQD 348
           G+    Q A      Q  QH PH       +PN G   H  P   Q S L        Q 
Sbjct: 505 GQQQQQQQASHPQQQQQQQHSPHSLVRVKKEPNVGQ-RHLSPHHQQQSPLL-------QH 556

Query: 347 HNEEAHGNRQQPSRCHQQWWRTQFGQ 270
           H ++    +QQ    HQQ  + Q  Q
Sbjct: 557 HQQQQQQQQQQQQHLHQQQQQQQHHQ 582

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>RIC8_DROME (Q9W358) Synembryn (Protein Ric-8)|
          Length = 573

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = +1

Query: 124 LQAVPSEVQEKETGEDRLQGQAQAHQPRQEQVQHTKVPVCCAIYQQRCHCPNCVRHHC 297
           L A P E+++    E+R + Q +  Q + E +      +C  +YQ       C+R HC
Sbjct: 105 LPATPDELKQ----EEREEPQLEPSQAQSEVIAEALKCLCNLVYQSSDCRRQCLRQHC 158

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>SIAH2_XENLA (Q9I8X5) Ubiquitin ligase SIAH2 (EC 6.3.2.-) (Seven in absentia|
           homolog 2) (Xsiah-2)
          Length = 313

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -3

Query: 524 PGAPGKASSHQTAQQKSPPQWPQHCPHIPDPNHGT*AHGGPKADQCSTL 378
           P + G  +S    +QK PP  P H P +P    G      P A   + +
Sbjct: 4   PSSAGPCASKPCGKQKQPPPPPPHAPSLPATISGGPGASAPPAPTAAAI 52

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>SECA_BACSU (P28366) Preprotein translocase secA subunit|
          Length = 841

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +1

Query: 100 EEPEDQGLLQAVPSEVQEKETGEDRLQGQAQAHQPRQ--EQVQHTKVPVCCAIYQQR--- 264
           E  ED+     + +E++     E+ +QGQ  AHQP++  +  +  K PV   +   R   
Sbjct: 765 ESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQEGDDNKKAKKAPVRKVVDIGRNAP 824

Query: 265 CHC 273
           CHC
Sbjct: 825 CHC 827

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>FOXJ3_HUMAN (Q9UPW0) Forkhead box protein J3|
          Length = 622

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 6/66 (9%)
 Frame = -3

Query: 569 HQTHGFQ*WS**GQHPGAPGKASSH--QTAQQKSP-PQWP---QHCPHIPDPNHGT*AHG 408
           H+ HG        QHP      + H  Q +Q +SP PQ P   QH  H P+  H T  H 
Sbjct: 385 HRPHGLP------QHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQ 438

Query: 407 GPKADQ 390
            P   Q
Sbjct: 439 APPPPQ 444

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>ZDHC7_RAT (Q923G5) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 7) (DHHC-7) (Sertoli cell gene
           with a zinc finger domain protein)
          Length = 308

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +1

Query: 229 KVPVCCAIYQQRCH----CPNCVR---HHC 297
           K P CC I  +R H    C  C+R   HHC
Sbjct: 131 KCPKCCCIKPERAHHCSICKRCIRKMDHHC 160

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>ZDHC7_MOUSE (Q91WU6) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 7) (DHHC-7) (GABA-A
           receptor-associated membrane protein 2)
          Length = 308

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +1

Query: 229 KVPVCCAIYQQRCH----CPNCVR---HHC 297
           K P CC I  +R H    C  C+R   HHC
Sbjct: 131 KCPKCCCIKPERAHHCSICKRCIRKMDHHC 160

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>ZDHC7_HUMAN (Q9NXF8) Palmitoyltransferase ZDHHC7 (EC 2.3.1.-) (Zinc finger DHHC|
           domain-containing protein 7) (DHHC-7) (Zinc finger
           protein 370)
          Length = 308

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 7/30 (23%)
 Frame = +1

Query: 229 KVPVCCAIYQQRCH----CPNCVR---HHC 297
           K P CC I  +R H    C  C+R   HHC
Sbjct: 131 KCPKCCCIKPERAHHCSICKRCIRKMDHHC 160

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>RL18_THEMA (Q9ZAE3) 50S ribosomal protein L18|
          Length = 122

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +2

Query: 209 KNKYNTPKY-RFVVRFTNKDVTAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAY 385
           K  + TP+  R  V  +NK + AQI+  TI   +V A+    EL R  L+    N  AA 
Sbjct: 20  KKVFGTPERPRLCVFRSNKHIYAQIIDDTIGHTLVSASTLDPEL-REKLQ-KTWNVEAAK 77

Query: 386 CTGLLLARRVLK 421
             GLL+ +R L+
Sbjct: 78  EVGLLIGKRALE 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,098,043
Number of Sequences: 219361
Number of extensions: 1521016
Number of successful extensions: 5365
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 4921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5301
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result