ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart21c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 3e-33
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
3gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome... 137 5e-29
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.52
6emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb... 44 0.52
7ref|XM_525839.1| PREDICTED: Pan troglodytes similar to Hypotheti... 42 2.0
8ref|XM_415989.1| PREDICTED: Gallus gallus similar to selenoprote... 42 2.0
9ref|XM_591971.2| PREDICTED: Bos taurus similar to tumor suppress... 42 2.0
10gb|BC009310.2| Homo sapiens hypothetical protein MGC11332, mRNA ... 42 2.0
11gb|AC183767.2| Pan troglodytes BAC clone CH251-373L9 from chromo... 42 2.0
12gb|M76725.2| Chlamydomonas reinhardtii 70 kDa heat shock protein... 42 2.0
13dbj|AK075376.1| Homo sapiens cDNA PSEC0066 fis, clone NT2RP20010... 42 2.0
14emb|CR599593.1| full-length cDNA clone CS0DA008YB04 of Neuroblas... 42 2.0
15ref|NM_032718.2| Homo sapiens hypothetical protein MGC11332 (MGC... 42 2.0
16gb|AC007239.3| Homo sapiens BAC clone RP11-83A12 from 2, complet... 42 2.0
17dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 42 2.0
18gb|BC006242.2| Homo sapiens hypothetical protein MGC11332, mRNA ... 42 2.0
19dbj|D84222.1| Thermus thermophilus DNA for DnaK homologue, GrpE ... 42 2.0
20ref|XM_450273.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
21ref|NM_197151.1| Oryza sativa (japonica cultivar-group) hypothet... 40 8.1
22gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 8.1
23gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 8.1
24gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chrom... 40 8.1
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.1
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 8.1
27ref|XM_676260.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.1
28gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Canc... 40 8.1
29gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromo... 40 8.1
30gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 40 8.1
31gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, comple... 40 8.1
32gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Canc... 40 8.1
33emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chr... 40 8.1
34emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chro... 40 8.1
35emb|CR387988.4| Human DNA sequence from clone RP11-266E16 on chr... 40 8.1
36emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chr... 40 8.1
37emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chr... 40 8.1
38emb|AL590399.4| Human DNA sequence from clone RP11-111F5 on chro... 40 8.1
39gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 8.1
40gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chrom... 40 8.1
41emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon 40 8.1
42emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.1
43emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 8.1
44emb|BX640433.1| Bordetella parapertussis strain 12822, complete ... 40 8.1
45emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 8.1
46emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.1
47emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.1
48emb|AL773537.4| Human DNA sequence from clone RP11-268E1 on chro... 40 8.1
49gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 40 8.1
50gb|AE012548.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.1
51gb|AC055714.11| Homo sapiens 3 BAC RP11-85P9 (Roswell Park Cance... 40 8.1
52gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complet... 40 8.1
53emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chro... 40 8.1
54gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.1
55gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.1
56dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
57dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
58dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
59gb|AC107393.4| Homo sapiens BAC clone RP11-614F17 from 4, comple... 40 8.1
60ref|XM_237091.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 40 8.1
61gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.1
62dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 8.1
63dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.1
64dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
65emb|AL845419.18| Zebrafish DNA sequence from clone CH211-198O19 ... 40 8.1
66dbj|AK063577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
67emb|AL929040.12| Zebrafish DNA sequence from clone CH211-284M7 i... 40 8.1
68gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 8.1
69gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
70gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 8.1
71gb|L57504.1|TTHHSP Thermus aquaticus molecular chaperone (dnak),... 40 8.1
72emb|AL831777.5| Mouse DNA sequence from clone RP23-465E7 on chro... 40 8.1
73emb|AL365201.14| Human DNA sequence from clone RP11-39C22 on chr... 40 8.1
74emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chr... 40 8.1
75dbj|AB012390.1| Thermus thermophilus genes for DnaK, GrpE, DnaJ,... 40 8.1
76dbj|AB032368.1| Thermus thermophilus clpB, dafA, dnaJ, grpE, dna... 40 8.1 
>dbj|AK068705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160D16, full
           insert sequence
          Length = 1360

 Score =  151 bits (76), Expect = 3e-33
 Identities = 136/156 (87%)
 Strand = Plus / Plus

                                                                       
Query: 436 aacaacaacagcgtgcttttaaaagagctgagaaacttcaagatagtctagaccctgaca 495
           |||| ||||| |||||||| |||| |||||||| ||||||| |||||||||||||||| |
Sbjct: 461 aacagcaacaacgtgctttcaaaaaagctgagagacttcaaaatagtctagaccctgaga 520

                                                                       
Query: 496 acccgtcgtttgtcaagaacatggttaggtcacatgtatccagctgcttttggcttggtc 555
           ||||||||||||| |||| ||||||| | |||||||| ||||||||||||||||||||||
Sbjct: 521 acccgtcgtttgttaagaccatggttcgatcacatgtgtccagctgcttttggcttggtc 580

                                               
Query: 556 tcccgtctagtttctgcaaagatcatctgcctccca 591
           | |   |||| |||||||||   |||||||||||||
Sbjct: 581 ttcgaactagattctgcaaattgcatctgcctccca 616



 Score =  127 bits (64), Expect = 4e-26
 Identities = 100/112 (89%)
 Strand = Plus / Plus

                                                                       
Query: 103 cggaggcgggcagcgccggcgcgggcgccgcctacgaggaggagcgccggaagcggatcc 162
           ||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 122 cggaggccggcagcgcggccgccggcgccgcctacgaggaggagcgccggaagcgggtcc 181

                                                               
Query: 163 tcgacaacctcaagcacctcgaggatttgggaatatccaagatggccaagag 214
           |||| ||||||||||||||||||||| |||| |||   |||||| |||||||
Sbjct: 182 tcgagaacctcaagcacctcgaggatctgggcataaagaagatgtccaagag 233
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  137 bits (69), Expect = 5e-29
 Identities = 105/117 (89%)
 Strand = Plus / Minus

                                                                            
Query: 436      aacaacaacagcgtgcttttaaaagagctgagaaacttcaagatagtctagaccctgaca 495
                |||| ||||| |||||||| |||| |||||||| ||||||| |||||||||||||||| |
Sbjct: 23520102 aacagcaacaacgtgctttcaaaaaagctgagagacttcaaaatagtctagaccctgaga 23520043

                                                                         
Query: 496      acccgtcgtttgtcaagaacatggttaggtcacatgtatccagctgcttttggcttg 552
                ||||||||||||| |||| ||||||| | |||||||| |||||||||||||||||||
Sbjct: 23520042 acccgtcgtttgttaagaccatggttcgatcacatgtgtccagctgcttttggcttg 23519986



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                            
Query: 103      cggaggcgggcagcgccggcgcgggcgccgcctacgaggaggagcgccggaagcggatcc 162
                ||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 23521318 cggaggccggcagcgcggccgccggcgccgcctacgaggaggagcgccggaagcgggtcc 23521259

                                        
Query: 163      tcgacaacctcaagcacctcgagg 186
                |||| |||||||||||||||||||
Sbjct: 23521258 tcgagaacctcaagcacctcgagg 23521235
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>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0095J22, complete sequence
          Length = 151730

 Score =  137 bits (69), Expect = 5e-29
 Identities = 105/117 (89%)
 Strand = Plus / Minus

                                                                         
Query: 436   aacaacaacagcgtgcttttaaaagagctgagaaacttcaagatagtctagaccctgaca 495
             |||| ||||| |||||||| |||| |||||||| ||||||| |||||||||||||||| |
Sbjct: 57274 aacagcaacaacgtgctttcaaaaaagctgagagacttcaaaatagtctagaccctgaga 57215

                                                                      
Query: 496   acccgtcgtttgtcaagaacatggttaggtcacatgtatccagctgcttttggcttg 552
             ||||||||||||| |||| ||||||| | |||||||| |||||||||||||||||||
Sbjct: 57214 acccgtcgtttgttaagaccatggttcgatcacatgtgtccagctgcttttggcttg 57158



 Score =  119 bits (60), Expect = 1e-23
 Identities = 78/84 (92%)
 Strand = Plus / Minus

                                                                         
Query: 103   cggaggcgggcagcgccggcgcgggcgccgcctacgaggaggagcgccggaagcggatcc 162
             ||||||| |||||||| | ||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 58490 cggaggccggcagcgcggccgccggcgccgcctacgaggaggagcgccggaagcgggtcc 58431

                                     
Query: 163   tcgacaacctcaagcacctcgagg 186
             |||| |||||||||||||||||||
Sbjct: 58430 tcgagaacctcaagcacctcgagg 58407
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 52      ccgcgtaggcacacacgagaga 73
               ||||||||||||||||||||||
Sbjct: 2813324 ccgcgtaggcacacacgagaga 2813345
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 52      ccgcgtaggcacacacgagaga 73
               ||||||||||||||||||||||
Sbjct: 2813268 ccgcgtaggcacacacgagaga 2813289
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>emb|AL928758.3|CNS08CBV Oryza sativa chromosome 12, . BAC OSJNBb0075N21 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 145539

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 52    ccgcgtaggcacacacgagaga 73
             ||||||||||||||||||||||
Sbjct: 57123 ccgcgtaggcacacacgagaga 57102
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>ref|XM_525839.1| PREDICTED: Pan troglodytes similar to Hypothetical protein MGC11332
           (LOC470458), mRNA
          Length = 1125

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 639 gcgctcctccagggccaggac 619
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>ref|XM_415989.1| PREDICTED: Gallus gallus similar to selenoprotein O (LOC417745),
           mRNA
          Length = 3890

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 112 gcagcgccggcgcgggcgccg 132
           |||||||||||||||||||||
Sbjct: 880 gcagcgccggcgcgggcgccg 860
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>ref|XM_591971.2| PREDICTED: Bos taurus similar to tumor suppressing subtransferable
           candidate 5 (LOC514165), mRNA
          Length = 1467

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 972 gcgctcctccagggccaggac 952
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>gb|BC009310.2| Homo sapiens hypothetical protein MGC11332, mRNA (cDNA clone
           IMAGE:4101451), partial cds
          Length = 1720

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 433 gcgctcctccagggccaggac 413
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>gb|AC183767.2| Pan troglodytes BAC clone CH251-373L9 from chromosome 9, complete
             sequence
          Length = 162355

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 454   ttaaaagagctgagaaacttcaaga 478
             |||||||||||||||||||| ||||
Sbjct: 84314 ttaaaagagctgagaaacttgaaga 84290
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>gb|M76725.2| Chlamydomonas reinhardtii 70 kDa heat shock protein (hsp70) gene,
            complete cds
          Length = 4808

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  gggcagcgccggcgcgggcgccgcc 134
            ||||||||||||||| |||||||||
Sbjct: 3752 gggcagcgccggcgccggcgccgcc 3728
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>dbj|AK075376.1| Homo sapiens cDNA PSEC0066 fis, clone NT2RP2001087, weakly similar
           to TETRACYCLINE RESISTANCE PROTEIN
          Length = 2682

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 983 gcgctcctccagggccaggac 963
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>emb|CR599593.1| full-length cDNA clone CS0DA008YB04 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1470

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 975 gcgctcctccagggccaggac 955
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>ref|NM_032718.2| Homo sapiens hypothetical protein MGC11332 (MGC11332), mRNA
          Length = 2682

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 983 gcgctcctccagggccaggac 963
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>gb|AC007239.3| Homo sapiens BAC clone RP11-83A12 from 2, complete sequence
          Length = 139391

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 302    gcgctcctccagggccaggac 322
              |||||||||||||||||||||
Sbjct: 128022 gcgctcctccagggccaggac 128042
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 97     cgacgacggaggcgggcagcg 117
              |||||||||||||||||||||
Sbjct: 370981 cgacgacggaggcgggcagcg 371001



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 107     ggcgggcagcgccggcgcgg 126
               ||||||||||||||||||||
Sbjct: 2559814 ggcgggcagcgccggcgcgg 2559795
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>gb|BC006242.2| Homo sapiens hypothetical protein MGC11332, mRNA (cDNA clone
           MGC:11332 IMAGE:3952602), complete cds
          Length = 1532

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 302 gcgctcctccagggccaggac 322
           |||||||||||||||||||||
Sbjct: 986 gcgctcctccagggccaggac 966
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>dbj|D84222.1| Thermus thermophilus DNA for DnaK homologue, GrpE homologue, DnaJ
            homologue and DafA, complete cds
          Length = 3821

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 298  tcaggcgctcctccagggcca 318
            |||||||||||||||||||||
Sbjct: 2303 tcaggcgctcctccagggcca 2283
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>ref|XM_450273.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 757

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 91  ccatggcgacgacggaggcg 110
           ||||||||||||||||||||
Sbjct: 267 ccatggcgacgacggaggcg 248
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>ref|NM_197151.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0041P03.16), mRNA
          Length = 1509

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 115 gcgccggcgcgggcgccgcctacg 138
           |||||||||| |||||||||||||
Sbjct: 122 gcgccggcgccggcgccgcctacg 99
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 97      cgacgacggaggcgggcagcgccggcgcgggcgccg 132
               ||||||||  ||| |||||||||||||| |||||||
Sbjct: 3085342 cgacgacgtcggccggcagcgccggcgccggcgccg 3085377
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cgccggcgcgggcgccgcct 135
              ||||||||||||||||||||
Sbjct: 336854 cgccggcgcgggcgccgcct 336835
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>gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chromosome 9, complete
              sequence
          Length = 161307

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 140128 ttaaaagagctgagaaactt 140109
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cgccggcgcgggcgccgcct 135
              ||||||||||||||||||||
Sbjct: 110031 cgccggcgcgggcgccgcct 110012
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 116     cgccggcgcgggcgccgcct 135
               ||||||||||||||||||||
Sbjct: 1067875 cgccggcgcgggcgccgcct 1067856
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>ref|XM_676260.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN8083.2), mRNA
          Length = 1683

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 253 gcgccagcccaaagcccaggaaga 276
           |||||||| |||||||||||||||
Sbjct: 844 gcgccagcacaaagcccaggaaga 821
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>gb|AC153919.8| Mus musculus 10 BAC RP23-91E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 264561

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     aagactttgaccctcccctt 33
              ||||||||||||||||||||
Sbjct: 110202 aagactttgaccctcccctt 110221
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>gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromosome 9, complete
              sequence
          Length = 165959

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 151880 ttaaaagagctgagaaactt 151861
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   gggcagcgccggcgcgggcgccgc 133
             ||||||||||||||||| ||||||
Sbjct: 78856 gggcagcgccggcgcggccgccgc 78833
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>gb|AC121784.2| Mus musculus BAC clone RP23-378G4 from 12, complete sequence
          Length = 163125

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    agcccaaagcccaggaagaa 277
              ||||||||||||||||||||
Sbjct: 126835 agcccaaagcccaggaagaa 126854
to top
>gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 230201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    aagactttgaccctcccctt 33
             ||||||||||||||||||||
Sbjct: 29350 aagactttgaccctcccctt 29369
to top
>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three
              novel pseudogenes, the gene for a novel protein similar to
              ankyrin repeat domain 20A (ANKRD20A), the gene for a  novel
              protein similar to Ankyrin repeat domain protein 18A
              (LOC441424), a pseudogene similar to part of cytochrome
              P450 family protein, a novel zinc finger pseudogene and a
              CpG island, complete sequence
          Length = 161157

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 146556 ttaaaagagctgagaaactt 146537
to top
>emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chromosome 9 Contains the 5'
              end of a novel gene, a novel pseudogene and a pseudogene
              similar to part of ribosomal protein L10 (RPL10), complete
              sequence
          Length = 153630

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 101819 ttaaaagagctgagaaactt 101838
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>emb|CR387988.4| Human DNA sequence from clone RP11-266E16 on chromosome 9 Contains a
            pseudogene similar to part of ribosomal protein L10
            (RPL10), complete sequence
          Length = 30540

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 454  ttaaaagagctgagaaactt 473
            ||||||||||||||||||||
Sbjct: 4763 ttaaaagagctgagaaactt 4744
to top
>emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chromosome 9 Contains a
              pseudogene similar to part of ribosomal protein L7a
              (RPL7A), complete sequence
          Length = 171101

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 151686 ttaaaagagctgagaaactt 151667
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>emb|AL627230.15| Human DNA sequence from clone RP11-12A20 on chromosome 9 Contains six
              novel pseudogenes, the FAM27B gene for family with sequence
              similarity 27, member B, a pseudogene similar to part of
              ribosomal protein L10 (RPL10) and four CpG islands,
              complete sequence
          Length = 194246

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 191499 ttaaaagagctgagaaactt 191518
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>emb|AL590399.4| Human DNA sequence from clone RP11-111F5 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A), four novel genes, a pseudogene similar to part of
             ribosomal protein L10 (RPL10), a novel pseudogene and a
             pseudogene similar to part of fibroblast growth factor 7
             (keratinocyte growth factor) (FGF7), complete sequence
          Length = 187505

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 454   ttaaaagagctgagaaactt 473
             ||||||||||||||||||||
Sbjct: 85328 ttaaaagagctgagaaactt 85309
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 86      gccgcccatggcgacgacgg 105
               ||||||||||||||||||||
Sbjct: 3480649 gccgcccatggcgacgacgg 3480630
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>gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chromosome 4, complete
             sequence
          Length = 191017

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   ttaaaagagctgagaaactt 473
             ||||||||||||||||||||
Sbjct: 47088 ttaaaagagctgagaaactt 47107
to top
>emb|Y07826.2|TTDNAKOPN T.thermophilus DnaK operon
          Length = 6480

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  tcaggcgctcctccagggcc 317
            ||||||||||||||||||||
Sbjct: 2306 tcaggcgctcctccagggcc 2287
to top
>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cgccggcgcgggcgccgcct 135
              ||||||||||||||||||||
Sbjct: 161211 cgccggcgcgggcgccgcct 161192
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 106    aggcgggcagcgccggcgcgggcgccgc 133
              |||||||| |||||||||||| ||||||
Sbjct: 172999 aggcgggccgcgccggcgcggccgccgc 173026
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>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   cgccggcgcgggcgccgcct 135
             ||||||||||||||||||||
Sbjct: 97704 cgccggcgcgggcgccgcct 97685
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>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    cgccggcgcgggcgccgcct 135
              ||||||||||||||||||||
Sbjct: 139971 cgccggcgcgggcgccgcct 139990
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 116     cgccggcgcgggcgccgcct 135
               ||||||||||||||||||||
Sbjct: 1505623 cgccggcgcgggcgccgcct 1505604
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    cgccggcgcgggcgccgcct 135
              ||||||||||||||||||||
Sbjct: 948870 cgccggcgcgggcgccgcct 948851
to top
>emb|AL773537.4| Human DNA sequence from clone RP11-268E1 on chromosome 9 Contains three
              novel pseudogene, a novel gene, a pseudogene similar to
              part ofribosomal protein L10 (QM, NOV, DXS648, DXS648E,
              FLJ23544) (RPL10) and a CpG island, complete sequence
          Length = 166231

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 102075 ttaaaagagctgagaaactt 102094
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>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   gcgccggcgcgggcgccgcctacg 138
             |||||||||| |||||||||||||
Sbjct: 71679 gcgccggcgccggcgccgcctacg 71702
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>gb|AE012548.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 456
           of 460 of the complete genome
          Length = 10206

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 104 ggaggcgggcagcgccggcgcgggcgcc 131
           |||||||||| |||| ||||||||||||
Sbjct: 603 ggaggcgggctgcgcaggcgcgggcgcc 576
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>gb|AC055714.11| Homo sapiens 3 BAC RP11-85P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167788

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   acactgggagaatttcttct 431
             ||||||||||||||||||||
Sbjct: 45589 acactgggagaatttcttct 45570
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>gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complete sequence
          Length = 119491

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  ttaaaagagctgagaaactt 473
            ||||||||||||||||||||
Sbjct: 9072 ttaaaagagctgagaaactt 9091
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>emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chromosome 21, complete
              sequence
          Length = 178865

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    ttaaaagagctgagaaactt 473
              ||||||||||||||||||||
Sbjct: 137266 ttaaaagagctgagaaactt 137247
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 104     ggaggcgggcagcgccggcgcgggcgcc 131
               |||||||||| |||| ||||||||||||
Sbjct: 5100037 ggaggcgggctgcgcaggcgcgggcgcc 5100010
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 116     cgccggcgcgggcgccgcct 135
               ||||||||||||||||||||
Sbjct: 1089535 cgccggcgcgggcgccgcct 1089516
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 115      gcgccggcgcgggcgccgcctacg 138
                |||||||||| |||||||||||||
Sbjct: 18279491 gcgccggcgccggcgccgcctacg 18279468
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      ccatggcgacgacggaggcg 110
               ||||||||||||||||||||
Sbjct: 3691791 ccatggcgacgacggaggcg 3691772
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 104     ggaggcgggcagcgccggcg 123
               ||||||||||||||||||||
Sbjct: 5802107 ggaggcgggcagcgccggcg 5802088
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>gb|AC107393.4| Homo sapiens BAC clone RP11-614F17 from 4, complete sequence
          Length = 125785

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   ttaaaagagctgagaaactt 473
             ||||||||||||||||||||
Sbjct: 72413 ttaaaagagctgagaaactt 72432
to top
>ref|XM_237091.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 4931419K03
           (LOC316356), mRNA
          Length = 1444

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 cgctcctccagggccaggac 322
           ||||||||||||||||||||
Sbjct: 957 cgctcctccagggccaggac 938
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     gcagcgccggcgcgggcgcc 131
               ||||||||||||||||||||
Sbjct: 3950877 gcagcgccggcgcgggcgcc 3950896



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 107     ggcgggcagcgccggcgcgggcgccgcc 134
               |||||||||| |||||||||||| ||||
Sbjct: 1703384 ggcgggcagctccggcgcgggcggcgcc 1703357
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     tcaggcgctcctccagggcc 317
               ||||||||||||||||||||
Sbjct: 1417010 tcaggcgctcctccagggcc 1417029
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 94      tggcgacgacggaggcgggcagcg 117
               ||||||||||| ||||||||||||
Sbjct: 1624476 tggcgacgacgaaggcgggcagcg 1624499
to top
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1695_A02
          Length = 156214

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     ccatggcgacgacggaggcg 110
              ||||||||||||||||||||
Sbjct: 100052 ccatggcgacgacggaggcg 100033
to top
>emb|AL845419.18| Zebrafish DNA sequence from clone CH211-198O19 in linkage group 16,
             complete sequence
          Length = 176379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 468   aaacttcaagatagtctaga 487
             ||||||||||||||||||||
Sbjct: 16929 aaacttcaagatagtctaga 16910
to top
>dbj|AK063577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-H03, full
           insert sequence
          Length = 757

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 91  ccatggcgacgacggaggcg 110
           ||||||||||||||||||||
Sbjct: 267 ccatggcgacgacggaggcg 248
to top
>emb|AL929040.12| Zebrafish DNA sequence from clone CH211-284M7 in linkage group 16,
              complete sequence
          Length = 171330

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    aaacttcaagatagtctaga 487
              ||||||||||||||||||||
Sbjct: 162246 aaacttcaagatagtctaga 162265
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 101     gacggaggcgggcagcgccg 120
               ||||||||||||||||||||
Sbjct: 2137325 gacggaggcgggcagcgccg 2137344
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 115      gcgccggcgcgggcgccgcctacg 138
                |||||||||| |||||||||||||
Sbjct: 18288744 gcgccggcgccggcgccgcctacg 18288721
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 298     tcaggcgctcctccagggcc 317
               ||||||||||||||||||||
Sbjct: 1094098 tcaggcgctcctccagggcc 1094117
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>gb|L57504.1|TTHHSP Thermus aquaticus molecular chaperone (dnak), heat shock proteins
            (grpE, dnaJ) genes, complete cds
          Length = 3650

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  tcaggcgctcctccagggcc 317
            ||||||||||||||||||||
Sbjct: 2111 tcaggcgctcctccagggcc 2092
to top
>emb|AL831777.5| Mouse DNA sequence from clone RP23-465E7 on chromosome X, complete
             sequence
          Length = 109143

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ggtaggggatacactgggag 421
             ||||||||||||||||||||
Sbjct: 26247 ggtaggggatacactgggag 26228
to top
>emb|AL365201.14| Human DNA sequence from clone RP11-39C22 on chromosome 9, complete
             sequence
          Length = 114026

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 454   ttaaaagagctgagaaactt 473
             ||||||||||||||||||||
Sbjct: 14042 ttaaaagagctgagaaactt 14061
to top
>emb|AL513356.8| Mouse DNA sequence from clone RP23-193O17 on chromosome X, complete
              sequence
          Length = 216238

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    tgggagaatttcttcttacc 435
              ||||||||||||||||||||
Sbjct: 127132 tgggagaatttcttcttacc 127113
to top
>dbj|AB012390.1| Thermus thermophilus genes for DnaK, GrpE, DnaJ, DafA, ClpB, complete
            cds
          Length = 6480

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 298  tcaggcgctcctccagggcc 317
            ||||||||||||||||||||
Sbjct: 2306 tcaggcgctcctccagggcc 2287
to top
>dbj|AB032368.1| Thermus thermophilus clpB, dafA, dnaJ, grpE, dnaK, ftsH genes,
            complete cds
          Length = 9000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  tcaggcgctcctccagggcc 317
            ||||||||||||||||||||
Sbjct: 4175 tcaggcgctcctccagggcc 4194


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,939,641
Number of Sequences: 3902068
Number of extensions: 5939641
Number of successful extensions: 103568
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101239
Number of HSP's gapped (non-prelim): 2329
length of query: 593
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 570
effective length of database: 17,143,297,704
effective search space: 9771679691280
effective search space used: 9771679691280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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