>CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1|
          Length = 610

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
 Frame = -2

Query: 322 PSEWKGKLETERRLSSTTVEAVRTSLRRAAGSGPRDDDD-MSAMAPTRRLKRMNDAAPGL 146
           P++W+       R +   VE  +  +  AAG  P DD++ +    P         A+ GL
Sbjct: 80  PNQWRSISNILNRTAVQCVERYQKLIDEAAGIKPGDDEENLGLSGPGIETLPAVGASSGL 139

Query: 145 SHGDIGHHPSSGAIRSNGDPPPD 77
           + G++  +P S   R + +  PD
Sbjct: 140 AVGEMNLNPESKPARPDDEDLPD 162

>CPD1_DROME (P22058) Chromosomal protein D1|
          Length = 355

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
 Frame = -2

Query: 358 DAAGAEHATP*SPSEWK--GKLETERRLSSTTVEAVRT---SLRRAAGSGPR-------- 218
           D +GAE A   SPS  K  G+ ++     S + ++V+T   + +R AG   +        
Sbjct: 78  DGSGAELANNSSPSPTKGRGRPKSSGGAGSGSGDSVKTPGSAKKRKAGRPKKHQPSDSEN 137

Query: 217 ------DDDDMSAMAPTRRLKRMNDAAPGLSHGDIGH---HPSSGAIRSNGDPPPDLLAL 65
                 DDD  S++   R + R +  +  L+    G     P   A+ SNGD  P +   
Sbjct: 138 EDDQDEDDDGNSSIEERRPVGRPSAGSVNLNISRTGRGLGRPKKRAVESNGDGEPQVPKK 197

Query: 64  RG 59
           RG
Sbjct: 198 RG 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,997,676
Number of Sequences: 219361
Number of extensions: 860307
Number of successful extensions: 3433
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3432
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)