ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart21b02 |
|---|---|
| Clone Library Name | barley_pub |
>SAP_CAVPO (P20097) Saposin C (CO-beta-glucosidase) (Glucosylceramidase| activator) (Sphingolipid activator protein 2) (SAP-2) Length = 81 Score = 42.4 bits (98), Expect = 0.001 Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = +2 Query: 314 SPLCPACEKFTNEALSYLGQKQSQDKMMEVLHEACS-QTFSLEKKCVELVDSYATLLFA- 487 S C ACE + + + ++++K++ L C+ S+ + C E+VD+Y + A Sbjct: 2 SVTCKACEYVVKKVMELIDNNRTEEKIIHALDSVCALLPESVSEVCQEVVDTYGDSIVAL 61 Query: 488 KIAEIKPEEFCKRNGLC 538 + E+ PE C GLC Sbjct: 62 LLQEMSPELVCSELGLC 78
>SAP_BOVIN (P26779) Proactivator polypeptide precursor [Contains: Saposin A| (Protein A); Saposin B (Sphingolipid activator protein 1) (SAP-1) (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sulfatide/GM1 activator); Saposin C (Co-beta-glucosidase) (A Length = 525 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACSQ-TFSLEKKCVELVDSYA-TLLFAKIA 496 C CE E + +++++++ L + CS+ SL ++C E+VD+Y ++L + Sbjct: 316 CEVCEFVVKEVAKLIDNNRTEEEILHALDKVCSKLPTSLAEQCQEVVDTYGRSILSILLD 375 Query: 497 EIKPEEFCKRNGLCRDNAL 553 E PE C LC L Sbjct: 376 EASPELVCSMLHLCSSRGL 394 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = +2 Query: 275 LTLSKIPVRVERGSPLCPACEKFTNEALSYLGQKQSQDKMMEVLHEACS-QTFSLEKKCV 451 L + + V + C C+K L + ++++++ L + CS K+C Sbjct: 394 LPAATVRVMPRKDGGFCEVCKKLVGYLDRNLEKNSTKEQILAALEKGCSFLPDQYRKQCD 453 Query: 452 ELVDSYATLLFAKIAEIKPEEF-CKRNGLC 538 + V Y +L + E+ F C + G C Sbjct: 454 QFVTEYEPVLIEILVEVMDPSFVCLKIGAC 483
>SAP_HUMAN (P07602) Proactivator polypeptide precursor [Contains: Saposin A| (Protein A); Saposin B-Val; Saposin B (Sphingolipid activator protein 1) (SAP-1) (Cerebroside sulfate activator) (CSAct) (Dispersin) (Sulfatide/GM1 activator); Saposin C (Co-beta- Length = 524 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACSQT-FSLEKKCVELVDSY-ATLLFAKIA 496 C CE E + +++ ++++ + CS+ SL ++C E+VD+Y +++L + Sbjct: 315 CEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKSLSEECQEVVDTYGSSILSILLE 374 Query: 497 EIKPEEFCKRNGLCRDNAL 553 E+ PE C LC L Sbjct: 375 EVSPELVCSMLHLCSGTRL 393
>SAP_MOUSE (Q61207) Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin)| Length = 557 Score = 36.6 bits (83), Expect = 0.050 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACS--QTFSLEKKCVELVDSYATLLFAKI- 493 C C+ EA + L +Q++++ L + C SL C E+VDSY ++ I Sbjct: 63 CDICKTVVTEAGNLLKDNATQEEILHYLEKTCEWIHDSSLSASCKEVVDSYLPVILDMIK 122 Query: 494 -AEIKPEEFCKRNGLCR 541 P E C LC+ Sbjct: 123 GEMSNPGEVCSALNLCQ 139 Score = 33.1 bits (74), Expect = 0.56 Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = +2 Query: 284 SKIPVRV--ERGSPLCPACEKFTNEALSYLGQKQSQDKMMEVLHEACS-QTFSLEKKCVE 454 S +P V ++ C C+K L + ++++++ L + CS +K+C + Sbjct: 427 SALPAHVPPQKNGGFCEVCKKLVLYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDD 486 Query: 455 LVDSYATLLFAKIAEIKPEEF-CKRNGLC 538 V Y LL + E+ F C + G+C Sbjct: 487 FVAEYEPLLLEILVEVMDPGFVCSKIGVC 515
>SAP_RAT (P10960) Sulfated glycoprotein 1 precursor (SGP-1) (Prosaposin)| Length = 554 Score = 35.8 bits (81), Expect = 0.086 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACS--QTFSLEKKCVELVDSYATLLFAKI- 493 C C+ EA + L ++++++ L + C+ SL C E+VDSY ++ I Sbjct: 63 CDICKTVVTEAGNLLKDNATEEEILHYLEKTCAWIHDSSLSASCKEVVDSYLPVILDMIK 122 Query: 494 -AEIKPEEFCKRNGLCR 541 P E C LC+ Sbjct: 123 GEMSNPGEVCSALNLCQ 139 Score = 33.9 bits (76), Expect = 0.33 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Frame = +2 Query: 305 ERGSPLCPACEKFTNEALSYLGQKQSQDKMMEVLHEACS-QTFSLEKKCVELVDSYATLL 481 ++ C C+K L + ++++++ L + CS +K+C E V Y LL Sbjct: 433 QKNGGFCEVCKKLVIYLEHNLEKNSTKEEILAALEKGCSFLPDPYQKQCDEFVAEYEPLL 492 Query: 482 FAKIAEIKPEEF-CKRNGLC 538 + E+ F C + G+C Sbjct: 493 LEILVEVMDPSFVCSKIGVC 512
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 35.0 bits (79), Expect = 0.15 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Frame = +2 Query: 206 GRGTVFLDNEQEARASGQIIKDQLTLSKIPVRVERGSPLCPACEK--FTNEALSYLGQKQ 379 GR +FLD +E ++ + ++T+ +I VR + + + F + L YLGQK Sbjct: 392 GRAVLFLDPSEEKGMLRRLEQKRVTVERINVRANKQQSIKNQLQNMCFKDPELKYLGQKA 451 Query: 380 SQDKMMEVLHEACSQTFSL-EKKCVELVDSYATLLFAKIAEIKPEEFCKRNGLCRDNALL 556 + V + +TF+L E K + S +I IK ++ +R R A L Sbjct: 452 FISYVKSVYIQKDKETFNLKELKLDDFAASLGLPGAPRIKFIKGDDTKERKNASRATAYL 511 Query: 557 S 559 + Sbjct: 512 T 512
>SAP_CHICK (O13035) Proactivator polypeptide precursor [Contains: Saposin A;| Saposin B; Saposin C; Saposin D] Length = 518 Score = 34.3 bits (77), Expect = 0.25 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 4/77 (5%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACS--QTFSLEKKCVELVDSYATLLFAKIA 496 C C++ L ++D++ L + C L +C E+VDSY ++ I Sbjct: 64 CDLCKELVTVVGKVLKDNGTEDEIRSYLEKRCEFLPDQGLASECKEIVDSYLPVIMDMIK 123 Query: 497 E--IKPEEFCKRNGLCR 541 E KPE C LC+ Sbjct: 124 EEFDKPEVVCSALSLCQ 140
>JPH1_HUMAN (Q9HDC5) Junctophilin-1 (Junctophilin type 1) (JP-1)| Length = 661 Score = 32.3 bits (72), Expect = 0.95 Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Frame = -2 Query: 255 PDARASCSLSRK--TVPR-PCALPRLTSSKRSRQKGNLSPKPIAREVPTLTLRLGNRARS 85 P + S RK T PR P A P+ + S S SPKP+ ++ P+ RL RS Sbjct: 447 PTPKESPHFYRKGTTPPRSPEASPKHSHSPAS------SPKPLKKQNPSSGARLNQDKRS 500 Query: 84 RREEQVVVRLGRPDLSSA 31 +EQV + +P +S A Sbjct: 501 VADEQVTAIVNKPLMSKA 518
>PSPB_RAT (P22355) Pulmonary surfactant-associated protein B precursor (SP-B)| (Pulmonary surfactant-associated proteolipid SPL(Phe)) Length = 376 Score = 32.3 bits (72), Expect = 0.95 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%) Frame = +2 Query: 320 LCPACEKFTNEALSYLGQKQSQDKMMEVLHEACS--QTFSLEKKCVELVDSYATLLFAKI 493 LC CE + + QD + + L + C L +C +++D Y L+ Sbjct: 66 LCQECEDIVHLLTKMTKEDAFQDTIRKFLEQECDILPLKLLVPRCRQVLDVYLPLVIDYF 125 Query: 494 -AEIKPEEFCKRNGLC 538 +IKP+ C GLC Sbjct: 126 QGQIKPKAICSHVGLC 141 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACSQTFSLEKKCVELVDSYATLLFAKIAEI 502 C C+ N+A + S+ M + +H+AC + + +KC + V+ + L A + Sbjct: 294 CHFCKSVINQAWN-----TSEQAMPQAMHQACLRFWLDRQKCEQFVEQHMPQLLALVPRS 348 Query: 503 K-PEEFCKRNGLC 538 + C+ G+C Sbjct: 349 QDAHTSCQALGVC 361
>RY44_DROME (Q24498) Ryanodine receptor 44F| Length = 5127 Score = 32.3 bits (72), Expect = 0.95 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%) Frame = +3 Query: 399 RSFMKLVLRHSRWRRSVLSWWTPMQLSYLPRSRRSSQKSS------ANEMASAGTMLFCL 560 RS +L L ++W ++W+ PM++ ++ R S E AS T FCL Sbjct: 256 RSLWRLELARTKWTGGFINWYHPMRIRHITTGRYLGVNDSNELILVKKEEASIATTTFCL 315
>TRI46_MOUSE (Q7TNM2) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 32.0 bits (71), Expect = 1.2 Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 12/117 (10%) Frame = -2 Query: 327 GHSGLPLSTRTGILLKVS*SLMI*PDARASCSLSRKTVPRPCALPRLTSS----KRSRQK 160 GH G P S T S P R S LSR+T+P+P L RL S R++ Sbjct: 68 GHGGDPSSEPT--------SPASTPSTR-SPRLSRRTLPKPDRLDRLLKSGFGTYPGRKR 118 Query: 159 GNLSPKPIAREVPTL--TLRLGNRA-----RSRREEQVVVRLGRP-DLSSAFVCRVC 13 G L P+ I P + LG R R+ E+VV R + + A +C++C Sbjct: 119 GALHPQTILFPCPACQGDVELGERGLSGLFRNLTLERVVERYRQSVSVGGAILCQLC 175
>TRI46_HUMAN (Q7Z4K8) Tripartite motif protein 46 (Tripartite, fibronectin| type-III and C-terminal SPRY motif protein) Length = 759 Score = 31.6 bits (70), Expect = 1.6 Identities = 37/117 (31%), Positives = 51/117 (43%), Gaps = 12/117 (10%) Frame = -2 Query: 327 GHSGLPLSTRTGILLKVS*SLMI*PDARASCSLSRKTVPRPCALPRLTSS----KRSRQK 160 GH G P S T S P R S LSR+T+P+P L RL S R++ Sbjct: 68 GHGGDPSSEPT--------SPASTPSTR-SPRLSRRTLPKPDRLDRLLKSGFGTYPGRKR 118 Query: 159 GNLSPKPIAREVPTL--TLRLGNRA-----RSRREEQVVVRLGRP-DLSSAFVCRVC 13 G L P+ I P + LG R R+ E+VV R + + A +C++C Sbjct: 119 GALHPQVIMFPCPACQGDVELGERGLAGLFRNLTLERVVERYRQSVSVGGAILCQLC 175
>JPH1_MOUSE (Q9ET80) Junctophilin-1 (Junctophilin type 1) (JP-1)| Length = 660 Score = 31.6 bits (70), Expect = 1.6 Identities = 17/52 (32%), Positives = 27/52 (51%) Frame = -2 Query: 186 TSSKRSRQKGNLSPKPIAREVPTLTLRLGNRARSRREEQVVVRLGRPDLSSA 31 +S K+S SP+P ++ P+ RL +S EEQV + +P +S A Sbjct: 468 SSPKQSHSPQPSSPEPSKKQNPSPGARLSQDKQSLAEEQVTAFVNKPSMSKA 519
>PSPB_MOUSE (P50405) Pulmonary surfactant-associated protein B precursor (SP-B)| (Pulmonary surfactant-associated proteolipid SPL(Phe)) Length = 377 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +2 Query: 323 CPACEKFTNEALSYLGQKQSQDKMMEVLHEACSQTFSLEKKCVELVDSYATLLFAKIAEI 502 C C+ N+A + S+ M + +H+AC + + +KC + V+ + L A + Sbjct: 295 CHFCKSVINQAWN-----TSEQAMPQAMHQACLRFWLDRQKCEQFVEQHMPQLLALVPRS 349 Query: 503 KPEEF-CKRNGLC 538 + C+ G+C Sbjct: 350 QDAHITCQALGVC 362
>ASPR_HORVU (P42210) Phytepsin precursor (EC 3.4.23.40) (Aspartic proteinase)| [Contains: Phytepsin 32 kDa subunit; Phytepsin 29 kDa subunit; Phytepsin 16 kDa subunit; Phytepsin 11 kDa subunit] Length = 508 Score = 30.8 bits (68), Expect = 2.8 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%) Frame = +2 Query: 308 RGSPLCPACEKFTNEALSYLGQKQSQDKMMEVLHEACSQTFS-LEKKCVE------LVDS 466 R P+C ACE + L Q ++QD +++ +++ C++ S + + V+ + D Sbjct: 377 RADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDI 436 Query: 467 YATLLFAKIAEIKPEEFCKRNG 532 T+ K A +KPEE+ + G Sbjct: 437 EFTIGGKKFA-LKPEEYILKVG 457
>MYSH_ACACA (P47808) High molecular weight form of myosin-1 (High molecular| weight form of myosin I) (HMWMI) Length = 1577 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = +2 Query: 257 QIIKDQLTLSKIPVRVERGSPLCPAC-------EKFTNEALSYLGQKQSQDKMMEVLHE 412 QIIK QLT + P V +G L C E+F N +L K DK +E+LH+ Sbjct: 1324 QIIK-QLTENPSPQSVTKGWQLMRCCLQTFPPSEEFANCLEMFLAAKGKDDKYIEMLHD 1381
>Y1249_LEGPL (Q5WX49) UPF0082 protein lpl1249| Length = 247 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +2 Query: 341 FTNEALSYLGQKQSQDKMMEVLHEACSQTFSLEKKCVEL---VDSYATLLFA 487 FTN+ + Q +DK+ME+ +A + ++E +E+ V++Y T+L A Sbjct: 134 FTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQIEIITPVEAYHTVLNA 185
>Y1249_LEGPA (Q5X5S1) UPF0082 protein lpp1249| Length = 247 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +2 Query: 341 FTNEALSYLGQKQSQDKMMEVLHEACSQTFSLEKKCVEL---VDSYATLLFA 487 FTN+ + Q +DK+ME+ +A + ++E +E+ V++Y T+L A Sbjct: 134 FTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDSQIEIITPVEAYHTVLNA 185
>DOK3_HUMAN (Q7L591) Docking protein 3 (Downstream of tyrosine kinase 3)| Length = 496 Score = 30.0 bits (66), Expect = 4.7 Identities = 18/44 (40%), Positives = 19/44 (43%) Frame = -2 Query: 249 ARASCSLSRKTVPRPCALPRLTSSKRSRQKGNLSPKPIAREVPT 118 AR L T P+PC LPR TS G L P E PT Sbjct: 308 ARQRERLPELTRPQPCPLPRATSLPSLDTPGELREMPPGPEPPT 351
>REEP4_BOVIN (Q3ZCI8) Receptor expression-enhancing protein 4| Length = 257 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = -2 Query: 252 DARASCSLSRKTVPRPCALPRLTSSKRSRQKGNLSPKPIAREVPTLTLRLGNRARS 85 D C + VP+P A PR RS+ + KP+ARE + +L++ R ++ Sbjct: 195 DTDNECWSDTEVVPQPPARPREKPLGRSQSLRVIKRKPLAREGTSRSLKVRTRKKT 250
>R1AB_BSCR3 (Q3I5J6) Replicase polyprotein 1ab (pp1ab) (ORF1AB) [Includes:| Replicase polyprotein 1a (pp1a) (ORF1A)] [Contains: Leader protein; p65 homolog; NSP1 (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); 3C-like proteinase (EC 3.4.22.-) (3CL-PRO) (3 Length = 7071 Score = 30.0 bits (66), Expect = 4.7 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +2 Query: 296 VRVERGSPLCPACEKFTNEALSYLGQKQSQDKMMEVLHEACSQ--TFSLEKKCVELVDSY 469 +RVE S L C + N+ L ++ +KM+ +L S + K C E++D+ Sbjct: 3854 LRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNR 3913 Query: 470 ATL 478 ATL Sbjct: 3914 ATL 3916
>LYXK_PASMU (P57928) Probable L-xylulose kinase (EC 2.7.1.53) (L-xylulokinase)| Length = 483 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +2 Query: 197 SAQGRGTVFLDNEQEARASGQIIKDQLTLSKIPVRVERGSP 319 SAQG+G LD E + G + DQ L+ + E+G P Sbjct: 78 SAQGKGAFLLDQENKPLGRGILSSDQRALTLVKQWQEQGIP 118
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 29.6 bits (65), Expect = 6.1 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%) Frame = +2 Query: 203 QGRGTVFLDNEQEARASGQIIKDQLTLSKIPVRVERGSPLCPACEK--FTNEALSYLGQK 376 +GR +FLD +E ++ + ++ + KI ++ + + + F + L YLGQK Sbjct: 390 EGRAVLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQNMCFKDPELKYLGQK 449 Query: 377 QSQDKMMEVLHEACSQTFSL-EKKCVELVDSYATLLFAKIAEIKPEEFCKRNGLCRDNAL 553 + V + + F L E K E S +I IK ++ +R R A Sbjct: 450 AFISYVKSVYIQKDKEIFKLKELKLDEFAASLGLPGAPRIKFIKGDDTKQRKNAPRAAAH 509 Query: 554 L 556 L Sbjct: 510 L 510
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 29.3 bits (64), Expect = 8.0 Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Frame = +2 Query: 200 AQGRGTVFLDNEQEARASGQIIKDQLTLSKIPVRVERGSPLCPACEK--FTNEALSYLGQ 373 ++GR +FLD +E ++ ++T+ K+ V+ + + + F + L YLGQ Sbjct: 399 SKGRAVLFLDPSEEEGFLKRLEHKKVTVQKVNVKENKKKSIKNELQSQCFQSPDLKYLGQ 458 Query: 374 KQSQDKMMEVLHEACSQTFSLEK 442 K + + + + F +K Sbjct: 459 KAFVSYVRSIYLQKDKEVFKFDK 481
>JPH1_RABIT (Q9GKY8) Junctophilin-1 (Junctophilin type 1) (JP-1)| (Mitsugumin-72) (Mg72) Length = 662 Score = 29.3 bits (64), Expect = 8.0 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = -2 Query: 183 SSKRSRQKGNLSPKPIAREVPTLTLRLGNRARSRREEQVVVRLGRPDLSSA 31 S K SR PKP ++ P+ RL R EEQV + +P S A Sbjct: 469 SPKYSRSPQPSPPKPAKKQNPSSGARLNQDKRGVAEEQVTAIVNKPLTSKA 519
>Y1286_LEGPH (Q5ZW02) UPF0082 protein lpg1286| Length = 247 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +2 Query: 341 FTNEALSYLGQKQSQDKMMEVLHEACSQTFSLEKKCVEL---VDSYATLLFA 487 FTN+ + Q +DK+ME+ +A + ++E +E+ V++Y T+L A Sbjct: 134 FTNQGEILMASNQPEDKVMEIAIDAGASDVAVEDGQIEIITPVEAYHTVLNA 185 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,857,178 Number of Sequences: 219361 Number of extensions: 1604733 Number of successful extensions: 4810 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 4483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4809 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
